cluster # 10171

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Schistosoma mansoni
cluster # 10171 cluster # 10171 Sequences # 14 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10171#0 length = 517 sequences # 1
consensus_10171#1 length = 427 sequences # 1
consensus_10171#2 length = 418 sequences # 4

consensus_10171#3 length = 367 sequences # 1
consensus_10171#4 length = 352 sequences # 5
consensus_10171#5 length = 226 sequences # 2

consensusID : consensus_10171#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 517
fasta sequence

                              [CCGCGCCGGTCTGGGGTAACAGGCGTAAGTTGGGACTAAAGGGTTTAAAAGTTGTGGAAAGATGTCTAGTATTTTATCTATATGGTGTGTAAAACCCGCATACATTTTCGTTCGTTCGAGAGCGGGAAGTCTGTTGACCGATTTAAGATGCTTTCATACAGCTGAATGTTTTAGCCTACAACGAGAGCTCTGTTCGAACAAGATGGCAACGATCGATGCTATTGTGGCTAGTGTATTGCCGAAAGAAACGGTATAAATGTAAAGTTTAACGTCCAACGTTTGTTAGATTTGGATCCAGCCTAAAGGTACCTTCTATGCTGGGAGAGTGTGGAGAACCGTATGTGGATCTGGGAAATAATACAACCGAAGAAAAAAGGGGCCGAAAACTCAGTAAGCATATAGAATGTGCATACGTTAAATAATGAGAACAATCGACACCAATAAGAATTAAAACTTCGTTTTTAAGAAACCTGGTAATCGAAACTGAGAGTTGGGGTACTTTCCATATCCCGTCCGC]

[+] EMBL CD200805             [CCGCGCCGGTCTGGGGTAACAGGCGTAAGTTGGGACTAAAGGGTTTAAAAGTTGTGGAAAGATGTCTAGTATTTTATCTATATGGTGTGTAAAACCCGCATACATTTTCGTTCGTTCGAGAGCGGGAAGTCTGTTGACCGATTTAAGATGCTTTCATACAGCTGAATGTTTTAGCCTACAACGAGAGCTCTGTTCGAACAAGATGGCAACGATCGATGCTATTGTGGCTAGTGTATTGCCGAAAGAAACGGTATAAATGTAAAGTTTAACGTCCAACGTTTGTTAGATTTGGATCCAGCCTAAAGGTACCTTCTATGCTGGGAGAGTGTGGAGAACCGTATGTGGATCTGGGAAATAATACAACCGAAGAAAAAAGGGGCCGAAAACTCAGTAAGCATATAGAATGTGCATACGTTAAATAATGAGAACAATCGACACCAATAAGAATTAAAACTTCGTTTTTAAGAAACCTGGTAATCGAAACTGAGAGTTGGGGTACTTTCCATATCCCGTCCGC]




>consensus_10171#0
CCGCGCCGGTCTGGGGTAACAGGCGTAAGTTGGGACTAAAGGGTTTAAAAGTTGTGGAAA
GATGTCTAGTATTTTATCTATATGGTGTGTAAAACCCGCATACATTTTCGTTCGTTCGAG
AGCGGGAAGTCTGTTGACCGATTTAAGATGCTTTCATACAGCTGAATGTTTTAGCCTACA
ACGAGAGCTCTGTTCGAACAAGATGGCAACGATCGATGCTATTGTGGCTAGTGTATTGCC
GAAAGAAACGGTATAAATGTAAAGTTTAACGTCCAACGTTTGTTAGATTTGGATCCAGCC
TAAAGGTACCTTCTATGCTGGGAGAGTGTGGAGAACCGTATGTGGATCTGGGAAATAATA
CAACCGAAGAAAAAAGGGGCCGAAAACTCAGTAAGCATATAGAATGTGCATACGTTAAAT
AATGAGAACAATCGACACCAATAAGAATTAAAACTTCGTTTTTAAGAAACCTGGTAATCG
AAACTGAGAGTTGGGGTACTTTCCATATCCCGTCCGC

consensusID : consensus_10171#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 427
fasta sequence

                              [GCNCGCCCATATGCTCTCACGGGAATCGACTGAAGGGAGTATCTGGGAAGCATTAGCCTTCTCATCATTTTACAAACTGGATAATCTTGTTATAATATTCGACGGTAATCGCCTTGGACAAAGTCAGCCGACACAACTGCAACACCATTTAGAAGCTTATCGACTACGGACTGAAGCATTTGGGTGTCATTCTATAGTGGTAGATGGTCATAACATTGAGGAGTTACTTAAAGCATTTTCATGTGCTCGTACGGTCAAAAATAAACCTGTTGCTTTAATTTGTAAAACGTACAAAGGTCAAGATTTCCCTGGTATTGCTGATCAGGAGAATTGGCATGGTAAACCCCTTGGAGTTAAGGCGAAGGAAGTTTTGGATTACCTCAATGCTCAATTAAGCAATACTTCAGTTGGTAGTTATTCTCTACCT]

[+] EMBL CD062664             [GCNCGCCCATATGCTCTCACGGGAATCGACTGAAGGGAGTATCTGGGAAGCATTAGCCTTCTCATCATTTTACAAACTGGATAATCTTGTTATAATATTCGACGGTAATCGCCTTGGACAAAGTCAGCCGACACAACTGCAACACCATTTAGAAGCTTATCGACTACGGACTGAAGCATTTGGGTGTCATTCTATAGTGGTAGATGGTCATAACATTGAGGAGTTACTTAAAGCATTTTCATGTGCTCGTACGGTCAAAAATAAACCTGTTGCTTTAATTTGTAAAACGTACAAAGGTCAAGATTTCCCTGGTATTGCTGATCAGGAGAATTGGCATGGTAAACCCCTTGGAGTTAAGGCGAAGGAAGTTTTGGATTACCTCAATGCTCAATTAAGCAATACTTCAGTTGGTAGTTATTCTCTACCT]




>consensus_10171#1
GCNCGCCCATATGCTCTCACGGGAATCGACTGAAGGGAGTATCTGGGAAGCATTAGCCTT
CTCATCATTTTACAAACTGGATAATCTTGTTATAATATTCGACGGTAATCGCCTTGGACA
AAGTCAGCCGACACAACTGCAACACCATTTAGAAGCTTATCGACTACGGACTGAAGCATT
TGGGTGTCATTCTATAGTGGTAGATGGTCATAACATTGAGGAGTTACTTAAAGCATTTTC
ATGTGCTCGTACGGTCAAAAATAAACCTGTTGCTTTAATTTGTAAAACGTACAAAGGTCA
AGATTTCCCTGGTATTGCTGATCAGGAGAATTGGCATGGTAAACCCCTTGGAGTTAAGGC
GAAGGAAGTTTTGGATTACCTCAATGCTCAATTAAGCAATACTTCAGTTGGTAGTTATTC
TCTACCT

consensusID : consensus_10171#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 418
fasta sequence

                              [AGGGACGACATGGATTAGGACAGAGAAATGAAAATGGGGAGAGATTTGCACCTATAAAGAGTGTTGCTCTGGTTGTTAGAAGGTGCATCGGCCTCGTGAATTCCGAAGAATTTCGGCTTTCCTCATGAGGCATCATAATTCTTCCTTTAACTCCCAGAGCACAGTTTAAATAGTTTGAATTATTTTTTCTGGTTAGTGTTTTTTTAGCGAGTTAGTTTTTCTACAGGATGAGGTCGCTAACCTCATGCCCAATCCTCCTCCTTTACCCAGACTTGGAACCAGCAGTAATTCTAGAAGAGTTACGAGCGGAGTCACGCCCCCCTAAGTCTTAAAGAATATTGAATAACAATGAATTTCATCGTACAGAATCATTGGTTAACAATAACCACATACATTCATTAAATCTAACCTCGTCCCT]

[+] EMBL CD124382             [AGGGACGACATGGATTAGGACAGAGAAGTGAAAATGGGGAGAGATTTGCACCTATAAAGAGTGTTGCTCTGGTTGTTAGAAGGTGCATCGGCCTCGTGAATTCCGAAGAATTTCGGCTTTCCTCATGAGGCATCATAATTCTTCCTTTAACTCCCAGAGCACAGTTTAAATAGTTTGAATTATTTTTTCTGGTTAGTGTTTTTTTAGCGAGTTAGTTTTTCTACAGGATGAGGTCGCTAACCTCATGCCCAATCCTCCTCCTTTACCCAGACTTGGAACCAGCAGTAATTCTAGAAGAGTTACGAGCGGAGTCACGCCCCCCTAAGTCTTAAAGAATATTGAATAACAATGAATTTCATCGTACAGAATCATTGGTTAACAATAACCACATACATTCATTAAATCTAACCTCGTCCC ]
[+] EMBL CD124400             [AGGGACGACATGGATTATGACAGAGAAATGAAAATGGGGAGAGATTTGCACCTATAAATAGTGTTGCTCTGGTTGTTAGAAGGCGCATCGGCCTCGTGAATTCCGAAGAATTTCGGCTTTCCTCATGAGGCATCATAATTCTTCCTTTAACTCCCAGAGCACAGTTTAAATAGTTTGAATTATTTTTTCTGGTTAGTGTTTTTTTAGCGAGTTAGTTTTTCTACAGGATGAGGTCGCTAACCTCATGCCCAATCCTCCTCCTTTACCCAGACTTGGAACCAGCAGTAATTCTACAAGAGTTACGAGCGGAGTCACGCCCCCCTAAGTCTTAAAGAATATTGAATAACAATGAATTTCATCGTACAGAATCATTGGTTAACAATAACCACATACATTCATTAAATCTAACCTCGTCCC ]
[-] EMBL CD124426             [ GGGACGACATGGATTAGGACAGAGAAATGAAAATGGGGAGAGATTTGCACCTATAAAGAGTGTTGCTCTGGTTGTTAGAAGGTGCATCGGCCTCGTGAATTCCGAAGAATTTCGGCTTTCCTCATGAGGCATCATAATTCTTCCTTTAACTCCCAGAGCACAGTTTAAATAGTTTGAATTATTTTTTCTGGTTAGTGTTTTTTTAGTGAGTTAGTTTTTCTACAGGATGAGGTCGCTAACCTCATGCCCAATCCTCCTCCTTTACCCAGACTTGGAACCAGCAGTAATTCTAGAAGAGTTACGAGCGGAGTCACGCCCCCCTAAGTCTTAAAGAATATTGAATAACAATGAATTTCATCGTACAGAATCATTGGTTAACAATAACCACATACATTCATTAAATCTAACCTCGTCCCT]
[-] EMBL CD124410             [ GGGACGACATGGATTAGGACAGAGAAATGAAAATGGGGAGAGATTTGCACCTATAAAGAGTGTTGCTCTGGTTGTTAGAAGGTGCATCGGCCTCGTGAATTCCGAAGAATTTCGGCTTTCCTCATGAGGCATCATAATTCTTCCTTTAACTCCCAGAGCACAGTTTAAATAGTTTGAATTATTTTTTCTGGTTAGTGTTTTTTTAGTGAGTTAGTTTTTCTACAGGATGAGGTCGCTAACGTCATGCCCAATCCTCCTCCTTTACCCAGACTTGGAACCAGCAGT                                                                                                                                    ]




>consensus_10171#2
AGGGACGACATGGATTAGGACAGAGAAATGAAAATGGGGAGAGATTTGCACCTATAAAGA
GTGTTGCTCTGGTTGTTAGAAGGTGCATCGGCCTCGTGAATTCCGAAGAATTTCGGCTTT
CCTCATGAGGCATCATAATTCTTCCTTTAACTCCCAGAGCACAGTTTAAATAGTTTGAAT
TATTTTTTCTGGTTAGTGTTTTTTTAGCGAGTTAGTTTTTCTACAGGATGAGGTCGCTAA
CCTCATGCCCAATCCTCCTCCTTTACCCAGACTTGGAACCAGCAGTAATTCTAGAAGAGT
TACGAGCGGAGTCACGCCCCCCTAAGTCTTAAAGAATATTGAATAACAATGAATTTCATC
GTACAGAATCATTGGTTAACAATAACCACATACATTCATTAAATCTAACCTCGTCCCT

consensusID : consensus_10171#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 367
fasta sequence

                              [TGTTACATGTGTATGTGGTTGATGGTGAGCGTTGTATTTGGTGTGATTGAGTATGTTATTATGTTTTGTAGGGTGTGCTATGTATTGGTGTTGCTGTTGTTGTTGTTGTTTAGACGAGTGACGTATGTGTATGAGATAAGTATAGATGTATGTATACATGTGTATATTTGATTATATGTGAATAAATAAACATTTGTTTATCATCTGCCTGTCTGTCTGTTTATAATTAGCGGTGCAGATATTTATGTAAATACACATAGATTTGTGTGTACGGGAGTGTAGATAGATGAGTGTATAGTGTGTGTGTGTGTGTTTGTGCGAGCGTGCTGATCTAGCATAAGTTATGTAGTGAATGTGTTTGTTGGTG]

[+] EMBL CD085302             [TGTTACATGTGTATGTGGTTGATGGTGAGCGTTGTATTTGGTGTGATTGAGTATGTTATTATGTTTTGTAGGGTGTGCTATGTATTGGTGTTGCTGTTGTTGTTGTTGTTTAGACGAGTGACGTATGTGTATGAGATAAGTATAGATGTATGTATACATGTGTATATTTGATTATATGTGAATAAATAAACATTTGTTTATCATCTGCCTGTCTGTCTGTTTATAATTAGCGGTGCAGATATTTATGTAAATACACATAGATTTGTGTGTACGGGAGTGTAGATAGATGAGTGTATAGTGTGTGTGTGTGTGTTTGTGCGAGCGTGCTGATCTAGCATAAGTTATGTAGTGAATGTGTTTGTTGGTG]




>consensus_10171#3
TGTTACATGTGTATGTGGTTGATGGTGAGCGTTGTATTTGGTGTGATTGAGTATGTTATT
ATGTTTTGTAGGGTGTGCTATGTATTGGTGTTGCTGTTGTTGTTGTTGTTTAGACGAGTG
ACGTATGTGTATGAGATAAGTATAGATGTATGTATACATGTGTATATTTGATTATATGTG
AATAAATAAACATTTGTTTATCATCTGCCTGTCTGTCTGTTTATAATTAGCGGTGCAGAT
ATTTATGTAAATACACATAGATTTGTGTGTACGGGAGTGTAGATAGATGAGTGTATAGTG
TGTGTGTGTGTGTTTGTGCGAGCGTGCTGATCTAGCATAAGTTATGTAGTGAATGTGTTT
GTTGGTG

consensusID : consensus_10171#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 352
fasta sequence

                              [AACTGGAAAGAAATAACAAGGACTGCCCAGGACAGGGTCGAATGGAGAATGCTGGTGGGCGGCCTATGCTCCACCACGAGGGGTAACAGGCGTAAGTTGGGACTAAAGGGTTTAGAAGTTGTGGAAAGATGTCTAGTATTTTATCTATATGGTGTGTAAAACCCGCATACATTTTCGTTCGTTCGAGAGCGGGAAGTCTGTTGACCGATTTAAGATGCTTTCATACAGCTGAATGTTTTAGCCTACAACGAGAGCTCTGTTCGAACAAGATGGCAACGATCGATGCTATTGTGGCTAGTGTATTGCCGAAAGAAACGGTATAAATGTAAAGTTTAACGTCCAACGTTTGTTA]

[+] EMBL CD184159             [AACTGGAAAGAAATAACAAGGACTGCCCAGGACAGGGTCGAATGGAGAATGCTGGTGGGCGGCCTATGCTCCACCACGAGGGGTAACAGGCGTAAGTTGGGACTAAAGGGTTTAGAAGTTGTGGAAAGATGTCTAGTATTTTATCTATATGGTGTGTAAAACCCGCATACATTTTCGTTCGTTCGAGAGCGGGAAGTCTGTTGACCGATTTAAGATGCTTTCATACAGCTGAATGTTTTAGCCTACAACGAGAGCTCTGTTCGAACAAGATGGCAACGATCGATGCTATTGTGGCTAGTGTATTGCCGAAAGAAACGGTATAAATGTAAAGTTTAACGTCCAACGTTTGTTA]
[+] EMBL CD113036             [                                           GGAGAATGCTGGTGGGCGGCCTATGCTCCACCACGAGGGGTAACAGGCGTAAGTTGGGACTAAAGGGTTTAGAAGTTGTGGAAAGATGTCTAGTATTTTATCTATATGGTGTGTAAAACCCGCATACATTTTCGTTCGTTCGAGAGCGGGAAGTCTGTTGACCGATTTAAGATGCTTTCATACAGCTGAATGTTTTAGCCTACAACGAGAGCTCTGTTCGAACAAGATGG                                                                               ]
[+] EMBL CD113080             [                                           GGAGAATGCTGGTGGGCGGCCTATGCTCCACCACGAGGGGTAACAGGCGTAAGTTGGGACTAAAGGGTTTAGAAGTTGTGGAAAGATGTCTAGTATTTTATCTATATGGTGTGTAAAACCCGCATACATTTTCGTTCGTTCGAGAGCGGGAAGTCTGTTGACCGATTTAAGATGCTTTCATACAGCTGAATGTTTTAGCCTACAACGAGAGCTCTGTTCGAACAAGATGG                                                                               ]
[+] EMBL CD113123             [                                           GGAGAATGCTGGTGGGCGGCCTATGCTCCACCACGAGGGGTAACAGGCGTAAGTTGGGACTAAAGGGTTTAGAAGTTGTGGAAAGATGTCTAGTATTTTATCTATATGGTGTGTAAAACCCGCATACATTTTCGTTCGTTCGAGAGCGGGAAGTCTGTTGACCGATTTAAGATGCTTTCATACAGCTGAATGTTTTAGCCTACAACGAGAGCTCTGTTCGAACAAGATGG                                                                               ]
[+] EMBL CD180613             [                                                                                                                TAGAAGTTGTGGAAAGATGTCTAGTATTTTATCTATATGGTGTGTAAAACCCGCATACATTTTCGTTCGTTCGAGAGCGGGAAGTCTGTTGACCGATTTAAGATGCTTTCATACAGCTGAATGTTTTAGCCTACAACGAGAGCTCTGTTCGAACAAGATGGCAACGATCGATGCTATTGTGGCTAGTGTATTGCCGAAAGAAACGGTATAAATGTA                        ]




>consensus_10171#4
AACTGGAAAGAAATAACAAGGACTGCCCAGGACAGGGTCGAATGGAGAATGCTGGTGGGC
GGCCTATGCTCCACCACGAGGGGTAACAGGCGTAAGTTGGGACTAAAGGGTTTAGAAGTT
GTGGAAAGATGTCTAGTATTTTATCTATATGGTGTGTAAAACCCGCATACATTTTCGTTC
GTTCGAGAGCGGGAAGTCTGTTGACCGATTTAAGATGCTTTCATACAGCTGAATGTTTTA
GCCTACAACGAGAGCTCTGTTCGAACAAGATGGCAACGATCGATGCTATTGTGGCTAGTG
TATTGCCGAAAGAAACGGTATAAATGTAAAGTTTAACGTCCAACGTTTGTTA

consensusID : consensus_10171#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 226
fasta sequence

                              [TACGATTCTCTGGATCATGCCAAGAAGTTCGAAATGAAATACCGTCTTGCTAGGAATAAACTAGTGACAGTTCCACCGAAAGGAAGAAAGTTAAGGAAAGAAAGGAAAAACAAGGCCAAAAAGATTCTCTGGATCATGCCAAGAAGTTCGAAATGAAATACCGTCTTGCTAGGAATAAACTAGTGACAGTTCCACCGAAAGGAAGAAAGTTAAGGAAAGAAAGGAA]

[+] EMBL CD185106             [TACGATTCTCTGGATCATGCCAAGAAGTTCGAAATGAAATACCGTCTTGCTAGGAATAAACTAGTGACAGTTCCACCGAAAGGAAGAAAGTTAAGGAAAGAAAGGAAAAACAAGGCCAAAAAGATTCTCTGGATCATGCCAAGAAGTTCGAAATGAAATACCGTCTTGCTAGGAATAAACTAGTGACAGTTCCACCGAAAGGAAGAAAGTTAAGGAAAGAAAGGAA]
[+] EMBL CD185429             [TACGATTCTCTGGATCATGCCAAGAAGTTCGAAATGAAATACCGTCTTGCTAGGAATAAACTAGTGACAGTTCCACCGAAAGGAAGAAAGTTAAGGAAAGAAAGGAAAAACAAGGCCAAAAAGATTCTCTGGATCATGCCAAGAAGTTCGAAATGAAATACCGTCATGCTAGGAATAAACTAGTGACAGTTCCACCGAAAGGAAGAAAGTTAAGGAAAGAAAGGAA]




>consensus_10171#5
TACGATTCTCTGGATCATGCCAAGAAGTTCGAAATGAAATACCGTCTTGCTAGGAATAAA
CTAGTGACAGTTCCACCGAAAGGAAGAAAGTTAAGGAAAGAAAGGAAAAACAAGGCCAAA
AAGATTCTCTGGATCATGCCAAGAAGTTCGAAATGAAATACCGTCTTGCTAGGAATAAAC
TAGTGACAGTTCCACCGAAAGGAAGAAAGTTAAGGAAAGAAAGGAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10171#0      ------------------------------------------------------------
consensus_10171#4      AACTGGAAAGAAATAACAAGGACTGCCCAGGACAGGGTCGAATGGAGAATGCTGGTGGGC 60
consensus_10171#3      ------------------------------------------------------------
consensus_10171#5      ------------------------------------------------------------
consensus_10171#1      ----------------------------------------------------GCNCGCCC 8
consensus_10171#2      ------------------------------------------------------------
                                                                                   

consensus_10171#0      --------CCGCGCCGGTCTGGGGTAACAGGCGTAAGTTGGGACTAAAGGGTTTAAAAGT 52
consensus_10171#4      GGCCTATGCTCCACCA-CGAGGGGTAACAGGCGTAAGTTGGGACTAAAGGGTTTAGAAGT 119
consensus_10171#3      ------TGTTACATGTGTATGTGGTTGATGGTGAGCGTTGTATTTGGTGTGATTGAGTAT 54
consensus_10171#5      ---------------------------------------------TACGATTCTCTGGAT 15
consensus_10171#1      ATATGCTCTCACGGGAATCGACTGAAGGGAGTATCTGGGAAGCATTAGCCTTCTCATCAT 68
consensus_10171#2      -AGGGACGACATGGATTAGGACAGAGAAATGAAAATGGGGAGAGATTTGCACCTATAAAG 59
                                                                            *      

consensus_10171#0      TGTGGAAAGATGTCTAGTATTTTAT-CTATATGGTGTGTAAAACCCGCATACATTTTCGT 111
consensus_10171#4      TGTGGAAAGATGTCTAGTATTTTAT-CTATATGGTGTGTAAAACCCGCATACATTTTCGT 178
consensus_10171#3      GTTATTATGTTTTGTAGGGTGTGCT-ATGTATTG-GTGTTG---CTGTTGTTGTTGTTGT 109
consensus_10171#5      CATGCCAAGAAGTTCGAAATGAAATACCGTCTTGCTAGGAA----TAAACTAGTGACAGT 71
consensus_10171#1      TTTACAAACTGGATAATCTTGTTATAATATTCGACGGTAATCGCCTTGGACAAAGTCAGC 128
consensus_10171#2      AGTGTTGCTCTGGTTGTTAGAAGGT-GCATCGGCCTCGTGAATTCCGAAGAATTTCGGCT 118
                         *                     *    *                              

consensus_10171#0      TCGTTCGAGAGCGGGAA-GTCTGTTGACCGATTTAAGATGCTTTCATACAGCTGAATGTT 170
consensus_10171#4      TCGTTCGAGAGCGGGAA-GTCTGTTGACCGATTTAAGATGCTTTCATACAGCTGAATGTT 237
consensus_10171#3      TTAGACGAGTGACGTAT-GTGTATGAGATAAGTATAGATGTATGTATACATGTGTATATT 168
consensus_10171#5      TCCACCGAAAGGAAGAA-AGTTAAGGAAAGA--AAGGAAAAACAAGGCCAAAAAGATTCT 128
consensus_10171#1      CGACACAACTGCAACACCATTTAGAAGCTTATCGACTACGGACTGAAGCATTTGGGTGTC 188
consensus_10171#2      TTCCTCATGAGGCATCATAATTCTTCCTTTAACTCCCAGAGCACAGTTTAAATAGTTTGA 178
                            *    *          *        *      *           *      *   

consensus_10171#0      TTAGCCTACAACGAGAGCTC--TGTTCGAACAAGATGGCAACGATCGATGCTATTGTG-G 227
consensus_10171#4      TTAGCCTACAACGAGAGCTC--TGTTCGAACAAGATGGCAACGATCGATGCTATTGTG-G 294
consensus_10171#3      TGATTATATGTGAATAAATAAACATTTGTTTATCATC-TGCCTGTCTGTCTGTTTATA-A 226
consensus_10171#5      CTGGATCATGCCAAGAAGTTCGAAATGAAATACCGTC-TTGCTAGGAATAAACTAGTG-A 186
consensus_10171#1      --ATTCTATAGTGGTAGATGGTCATAACATTGAGGAG-TTACTTAAAGCATTTTCATGTG 245
consensus_10171#2      ATTATTTTTTCTGGTTAGTG-TTTTTTTAGCGAGTTAGTTTTTCTACAGGATGAGGTC-G 236
                                         *                                     *   

consensus_10171#0      CTAGTGTATTGCCGAAAGAAACG-GTATAAATGTAAAGTTTAACGTCCAACGTTTGTTAG 286
consensus_10171#4      CTAGTGTATTGCCGAAAGAAACG-GTATAAATGTAAAGTTTAACGTCCAACGTTTGTTA- 352
consensus_10171#3      TTAGCG--GTGCAGATATTTATGTAAATACACATAGATTTGTGTGTACGGGAGTGTAGAT 284
consensus_10171#5      C-AGTT--CCACCGAAAGGAAGAAAGTTAAGGAAAGAAAGGAA----------------- 226
consensus_10171#1      CTCGTACGGT-CAAAAATAAACCTGTTGCTTTAATTTGTAAAACGTACAAAGGTCAAGAT 304
consensus_10171#2      CTAACCTCATGCCCAATCCTCCTCCTTTACCCAGACT-TGGAACCAGCAGTAATTCTAGA 295
                                  *  *                                             

consensus_10171#0      ATT--TGGATCCAGCCTAAAGGTACCTTCTATGCTGGGAGAGTGTGGAGAACCGTATGTG 344
consensus_10171#4      ------------------------------------------------------------
consensus_10171#3      AGA--TGAGTGTATAGTGTGTGTGTGTGTGTTTGTGCGAGCGTGCTGATCTAGCATAAGT 342
consensus_10171#5      ------------------------------------------------------------
consensus_10171#1      TTCCCTGGTATTGCTGATCAGGAGAATTGGCATGGTAAACCCCTTGGAGTTAAGGCGAAG 364
consensus_10171#2      AGAGTTACGAGCGGAG-TCACGCCCCCCTAAGTCTTAAAGAATATTGAATAACAATGAAT 354
                                                                                   

consensus_10171#0      GATCTGGGAAATAATA-CAACCGAAGAAAAAAGGGGCCGAAAACTCAGTAAGCATATAGA 403
consensus_10171#4      ------------------------------------------------------------
consensus_10171#3      TATGTAGTGAATGTGT-TTGTTGGTG---------------------------------- 367
consensus_10171#5      ------------------------------------------------------------
consensus_10171#1      GAAGTTTTGGATTACC-TCAATGCTCAATTAAGCAATACTTCAGTTGGTAGTTATTCTCT 423
consensus_10171#2      TTCATCGTACAGAATCATTGGTTAACAATAACCACATACATTCATTAAATCTAACCTCGT 414
                                                                                   

consensus_10171#0      ATGTGCATACGTTAAATAATGAGAACAATCGACACCAATAAGAATTAAAACTTCGTTTTT 463
consensus_10171#4      ------------------------------------------------------------
consensus_10171#3      ------------------------------------------------------------
consensus_10171#5      ------------------------------------------------------------
consensus_10171#1      ACCT-------------------------------------------------------- 427
consensus_10171#2      CCCT-------------------------------------------------------- 418
                                                                                   

consensus_10171#0      AAGAAACCTGGTAATCGAAACTGAGAGTTGGGGTACTTTCCATATCCCGTCCGC 517
consensus_10171#4      ------------------------------------------------------
consensus_10171#3      ------------------------------------------------------
consensus_10171#5      ------------------------------------------------------
consensus_10171#1      ------------------------------------------------------
consensus_10171#2      ------------------------------------------------------