|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10173#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1351 fasta sequence
[CCCTCCGAGGCCAANAATTCGGCACGAGGAAAAGTTGAGAAGAAAATTGGAACTAAAATTACATTCTCTTATGAAACTGAAGCAATGGGAACTGCCGGTCCAATCGCCTTAGCTAAAGATATGCTCCTCGTGGACGATAGTCCATTTTTTGTGCTCAACAGTGATATCATGTGTGATTTCCCGTTCAAGGCAATCATGGCATTTCACAAAAATCATGGGAAGTCAGGAACTATTTTGGTGACACAAGTTGAAGAACCTTCAAAATATGGTGTTGTTGTTTACGATCAAGCAACTGGACGTGTGGATCGTTTTGTTGAAAAACCAATTGAATTTGTTGGTAATAAGATAAATGCCGGTATATACTTACTTAATCCTAGTGTTATTGATAGGATCCCTCTACGTCCAACTTCCATTGAGAAAGAGATATTCCCAGAAATGGCGAACGAGAAACAACTCTATTGCATGACATTATCAGGGTTCTGGATGGATGTTGGACAACCTCATGATTTTCTCAAAGGTACAAATTTGTATCTAAATTACTTAAAACAATCAGATCATTCGAAGGAACTAGCAACTGGATCTAATATTNCATGGGAATGTTTTAATACATCCAACTGCTTCAGTTTCACCTACTTGTGTTCTTGGACCGAGTGTTGTTATTGGACCAAAGTGTATAGTTGAAGATGGAGTAAGAATTCGTAATTCAACCTTACTTCAAGGGAGTATTATTCGTTCGCATTCTTGGCTAGAAACTTGTATTATTGGTTGGCGGTGTACTGTTGGGCAGTGGGTGAGAATGGAAAATGTCACCGTCTTAGGTGAAGATGTCATTGTATCTGATGAATTATTTGTAAATGGTGCACGTGTACTACCACACAAAAGCATTGCTCAATCAGTTGTTGAACCGCAAATTATTATGTAATATGCCTGGGATGAAAACTCTTGTAAAAGTGCTGTGATCAAAACTCTTTCTTCTTTTCCTATACTCGTACTATTCTTATAATCGGTGCTATTCTATCGCCTTTTTATTTCAACAGTTTGTTTACTACATAGGAATATTATTTTTTTTTTGTGTTCCACCGACTGCTGTTATAATTTTTATTTTGNTTAATTTCTTTCTTTTTTGTTCAATTGAAAAATTGCCTTTCACTTATTTTGGACATTTTTATTACCAATGTATGGAACAAAATTTTTATTTGTGATCCAGTGCTGTTTTTTTTTCTATTTTTGTTTTATGTTGTTAAAAGTTGATAGGATTTCGTGTGTTTTAATCAGTTGTTAGATTCAATACTGTTGAATAGTTTGCTTTTTGTGTTTTTTTATTATTTCTGTATTTAAA-TATATGCATCAT]
[+] EMBL CD082017 [CCCTCCGAGGCCAANAATTCGGCACGAGGAAAAGTTGAGAAGAAAATTGGAACTAAAATTACATTCTCTTATGAAACTGAAGCAATGGGAACTGCCGGTCCAATCGCCTTAGCTAAAGATATGCTCCTCGTGGACGATAGTCCATTTTTTGTGCTCAACAGTGATATCATGTGTGATTTCCCGTTCAAGGCAATCATGGCATTTCACAAAAATCATGGGAAGTCAGGAACTATTTTGGTGACACAAGTTGAAGAACCTTCAAAATATGGTGTTGTTGTTTACGATCAAGCAACTGGACGTGTGGATCGTTTTGTTGAAAAACCAATTGAATTTGTTGGTAATAAGATAAATGCCGGTATATACTTACTTAATCCTAGTGTTATTGATAGGATCCCTCTACGTCCAACTTCCATTGAGAAAGAGATATTCCCAGAAATGGCGAACGAGAAACAACTCTATTGCATGACATTATCAGGGTTCTGGATGGATGTTGGACAACCTCATGATTTTCTCAAAGGTACAAATTTGTATCTAAATTACTTAAAACAATCAGATCATTCGAAGGAACTAGCAACTGGATCTAATATTNCATGGGAATGTTTTAATACATCCAACTGCTTCAGTTTCACCTACTTGTGTTCTTGGACCGAGTGTTGTTATTGGACCAAAGTGTATAGTTGAAGATGGAGTAAGAATTCGTAATTCA ]
[+] EMBL CD079305 [ AGGGTTCTGGATGGATGTTGGACAACCTCATGATTTTCTCAAAGGTACAAATTTGTATCTAAATTACTTAAAACAATCAGATCATTCGAAGGAACTAGCAACTGGATCTAATATT CATGGGAATGTTTTAATACATCCAACTGCTTCAGTTTCACCTACTTGTGTTCTTGGACCGAGTGTTGTTATTGGACCAAAGTGTATAGTTGAAGATGGAGTAAGAATTCGTAATTCAACCTTACTTCAAGGGAGTATTATTCGTTCGCATTCTTGGCTAGAAACTTGTATTATTGGTTGGCGGTGTACTGTTGGGCAGTGGGTGAGAATGGAAAATGTCACCGTCTTAGGTGAAGATGTCATTGTATCTGATGAATTATTTGTAAATGGTGCACGTGTACTACCACACAAAAGCATTGCTCAATCAGTTGTTGAACCGCAAATTATTATGTAATATGCCTGGGATGAAAACTCTTGTAAAAGTGCTGTGATCAAAACTCTTTCTTCTTTTCCTATACTCGTACTATTCTTATAATCGGTGCTATTCTATCGCCTTTTTATTTCAACAGTTTGTTTACTACATAGGAATATTATTTTTTTTTTGTGTTCCACCGACTGCTGTTATAATTTTTATTNTGNTTAATTTCT ]
[-] EMBL CD077059 [ CTTGGCTAGAAACTTGTATTATTGGTTGGCGGTGTACTGTTGGGCAGTGGGTGAGAATGGAAAATGTCACCGTCTTAGGTGAAGATGTCATTGTATTTGATGAATTATTTGTAAATGGTGCACGTGTACTACCACACAAAAGCATTGCTCAATCAGTTGTTGAACCACAAATTATTATGTAATATGCCTGGGATGAAAACTCTTGTAAAAGTGCTGTGATCAAAACTCTTTCTTCTTTTCCTATACTCGTACTATTTTTATAATCGGTGCTATTCTATCGCCTTTTTATTTCAACAGTTTGTTTACTACATAGGAATATTATTTTTTTTTTGTGTTCCACCGACTG ]
[-] EMBL CD073585 [ CACAAAAGCATTGGTCAATCAGTTGTTGAACCGCCAATTATTATGTAATATGCCTGGGATGAAAACTTTTGTAAAAGTGCTGTGATCAAAACTCTTTTTTTTTTTCCTATACTCGGACTATTTTTATAATCGGTGGTATTTTATCGCCTTTTTATTTCAACAGTTTGTTTACTACATAGGAATATTATTTTTTTTTTGTGTTCCCCCGACTGCTGTTATAATTTTTATTTTGGTTAATTTCTTTCTTTTTTGTTCAATTGAAAAATTGCCTTTCACTTATTTTGGACATTTTTATTACCAATGTATGGAACAAAATTTTTATTTGTGA ]
[-] EMBL AW017127 [ GCTCAATCAGTTGTTGAACCACAAATTATTATGTAATATGCCTGGGATGAAAACTCTTGTAAAAGTGCTGTGATCAAAACTCTTTCTTCTTTTCCTATACTGGTACTATTCTTATAATCGGTGCTATTCTATCGCCTTTTTATTTCAACAGTTTGTTTACTACATAGGAATATTATTTTTTTTTTGTGTTCCACCGACTGCTGTTATAATTTTTATTTTGTTTAATTTCTTTCCTTTTTGTTCAATTGAAAAATTGCCTCTCACTTATTTTGGACATTCTTATTACCAATGTATGGAACAAAATTTTTATTTGTGATCCAGTGCTGTTTTTTTTTCTATTTTTGTTTTATGTTGTTAAAAGTTGATAGGATTTCGTGTGTTTTAATCAGTTGTTAGATTCAATACTGTTGAATAGTTTGCTTTTTGTGTTTTTTTATTATTTCTGTATTTAAA TATATGCATCAT]
[-] EMBL CD077058 [ AAGTTGATAGGATTTCGTGTGTTTTAATCAGTTGTTAGATTCAATACTGTTGAATAGTTTGCTTTTTGTGTTTTTTTATTATTTCTGTATTTAAAGGATATGCATCAT]
[-] EMBL CD073584 [ AAGTTGATAGGATTTTGTGTGTTTTAATCAGTTGTTAGATTCAATACTGTTGAATAGTTTGCTTTTTGTGTTTTTTTATTATTTCTGTATTTAAA TATATGCATCA ]
consensusID : consensus_10173#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 663 fasta sequence
[GATATTACGCGCGAATTCGCCCTTCGTGACCTCGATTATATGCAGAGGTCATTTATCCTCTTCCATCTGTGATTTTTCGAATGTTTGATTACACTGATGTAATTAATCAAGATGAAAACGAGATTGTTGGCCTATGTTCTTGTGTTTGTGGTTCATGATGTGTCGTTTGCACCATAGGCATAACAACAGGCTGTGCTAAGAAATCTGTTTGTGTAGCCATGTTCTCTAGTGTTCGGACGACTATAGCCTGTAACTTCTTGGGAACGGATTGAACAGGTCTTGTTTCATGATACACACTCGCATCTTTAGTCGCAACCACTGGCCTATGTTCTTGTGGTGTTTGTGTTTCTGAATTTATCGTGACTGTGCCTGCTTGTGTGTGGACGTCGAATACTTTTGGTGGCAAGATAAGCGGTGGTGGTCTCTCTACCATCGTCTGAGTCTCAGTGTCTATTGTCGGTGGTTGTACTATTGCTTGTAGTTTTTTTGTGTACAATTGGCTCTGGACGTTTCTCGTGTTGTGTAATCAAATCTTTCACTTCGATTATTGGCCTATGTTCTTGTGGTGTTTGTGTTTCTGAATTTATCGTGACTGTTCCTGATTGTGTTTGGACGTCGAATACTTTTGGTGGCAAGATAATCGCCGTCAGCGAGATAAGGACG]
[+] EMBL CD060531 [GATATTACGCGCGAATTCGCCCTTCGTGACCTCGATTATATGCAGAGGTCATTTATCCTCTTCCATCTGTGATTTTTCGAATGTTTGATTACACTGATGTAATTAATCAAGATGAAAACGAGATTGTTGGCCTATGTTCTTGTGTTTGTGGTTCATGATGTGTCGTTTGCACCATAGGCATAACAACAGGCTGTGCTAAGAAATCTGTTTGTGTAGCCATGTTCTCTAGTGTTCGGACGACTATAGCCTGTAACTTCTTGGGAACGGATTGAACAGGTCTTGTTTCATGATACACACTCGCATCTTTAGTCGCAACCACTGGCCTATGTTCTTGTGGTGTTTGTGTTTCTGAATTTATCG ]
[+] EMBL CD060529 [ TCATTTATCCTCTTCCATCTGTGATTTTTCGAATGTTTGATTACACTGATGTAATTCATCAAGATGAAAACGAGATTGTTGGCCTATGTTCTTGTGTTTGTGGTTCATGATGTGTCGTTTGCACCATAGGCATAACAACAGGCTGTGCTAAGAAATCTGTTTGTGTATCCATGTTCTCTAGTGTTCGGACGACTATAGCCTGTAACTTCTTGGGAACGGATTGAACAGGTCTTGTTTCATGATACACACTCGCATCTTTAGTCGCAAGCACTGGCCTATGTTCTTGTGGTGTTTGTGTATCTGAATTTATCGTGACTGTGCCTGCTTGTGTGTGGACGTCGAATACTTTTGGTGGCAAGATAAGCGGTGGTGGTCTCTCTACCATCGTCTGAGTCTCAGTGTCTATTGTCGGTGGTTGTACTAT ]
[-] EMBL CD060536 [ CCTGTAACTTCTTGGGAACGGATTGTACAGGTCTTGTTTCATGATACACACTCGCATCTTTAGTCGCAACCACTGGCCGATGTTCTTGTGGTGTTTGTGTTTCTGAATTTATCGTGACTGTTCCTGATTGTGTTTGGACGTCGAATACTTTTGGTGGCAAGATAACCGGTGGTGGTCTCTCTACCATCGTCTGAGTCTCAGTGTTAATTGTCGGTGGTTGTACTATTGCTTGTAGTTTTTTTGTGTACAATTGGCTCTGGACGTTTCTCGTGTTGTGTAATCAAATCTTTCACTTCGATTATTGGCCTATGTTCTTGTGGTGTTTGTGTTTCTGAATTTATCGTGACTGTTCCTGATTGTGTTTGGACGTCGAATACTTTTGGTGGCAAGATAATCGCCGTCAGCGAGATAAGGACG]
consensusID : consensus_10173#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 531 fasta sequence
[AAACTACAAGCAATAGTACAACCACCGACAATTAACACTGAGACTCAGACGATGGTAGAGAGACCACCACCGATTATCTTGCCACCAAAAGTATTCGACGTCCAAACACAATCAGGATCAGTCACGATAAATTCAGAAACACAAACACCACAAGAACATAGGCCAATAATCGAAGTGAAAGATTTGATTACACAACACGAGAAACGTCCAGAGCCAATTGTACACAAAAAACTACAAGCAATAGTACAACCACCGACAATTAACACTGAGACTCAGACGATGGTAGAGAGACCACCACCGGTTATCTTGCCACCAAAAGTATTCGACGTCCAAACACAATCAGGAACAGTCACGATAAATTCAGAAACACAAACACCACAAGAACATAGGCCAATAATCGAAGTGAAAGATTTGATTACACAACACGAGAAACGTCCAGAGCCAATTGTACACAAAAAACTACAAGCAATAGTACAACCACCGACAATTAACACTGAGACTCAGACGATGGTAGAGAGACCACCACCGGTT]
[+] EMBL CD170529 [AAACTACAAGCAATAGTACAACCACCGACAATTAACACTGAGACTCAGACGATGGTAGAGAGACCACCACCGATTATCTTGCCACCAAAAGTATTCGACGTCCAAACACAATCAGGATCAGTCACGATAAATTCAGAAACACAAACACCACAAGAACATAGGCCAATAATCGAAGTGAAAGATTTGATTACACAACACGAGAAACGTCCAGAGCCAATTGTACACAAAAAACTACAAGCAATAGTACAACCACCGACAATTAACACTGAGACTCAGACGATGGTAGAGAGACCACCACCGGTTATCTTGCCACCAAAAGTATTCGACGTCCAAACACAATCAGGAACAGTCACGATAAATTCAGAAACACAAACACCACAAGAACATAGGCCAATAATCGAAGTGAAAGATTTGATTACACAACACGAGAAACGTCCAGAGCCAATTGTACACAAAAAACTACAAGCAATAGTACAACCACCGACAATTAACACTGAGACTCAGACGATGGTAGAGAGACCACCACCGGTT]
consensusID : consensus_10173#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 492 fasta sequence
[CACAAGAACATAGGCCAATAATCGAAGTGAAAGATTTGATTACACAACACGAGAAACGTCCAGAGCCAATTGTACACAACAAAACTACAAGCAATCAGTACAACCACCGAACAATTAACACTAGAAACTCAGCACGATGGTAGAGAAGACCACCACCGGATTATCGTTGCCACCATAAAGTATTCCGACGTCCCAAACACAATCCAGGAACAGTCACGCATAAATTCACGAAACACAACACACCCACAAGAAACATAAGGCCACATAATCCGAAGTGCAAAGATTTGATTGACACAACACGGAGAAACGTGCAGAGCCAATTGTACACAAGAGAGCTACAAGCAATAGTACAACCACCGAAAATTAACACTGAGACTCAGACGATGGGTAGAGAGACCACCACCGGTTATCTTGACACCAAAAGTATTCGACGTCCAAACACAATCAGGAACAGTCACGATAAATTCAGAAACACAAACACCACAAGAACAT]
[+] EMBL CD060550 [CACAAGAACATAGGCCAATAATCGAAGTGAAAGATTTGATTACACAACACGAGAAACGTCCAGAGCCAATTGTACACAACAAAACTACAAGCAATCAGTACAACCACCGAACAATTAACACTAGAAACTCAGCACGATGGTAGAGAAGACCACCACCGGATTATCGTTGCCACCATAAAGTATTCCGACGTCCCAAACACAATCCAGGAACAGTCACGCATAAATTCACGAAACACAACACACCCACAAGAAACATAAGGCCACATAATCCGAAGTGCAAAGATTTGATTGACACAACACGGAGAAACGTGCAGAGCCAATTGTACACAAGAGAGCTACAAGCAATAGTACAACCACCGAAAATTAACACTGAGACTCAGACGATGGGTAGAGAGACCACCACCGGTTATCTTGACACCAAAAGTATTCGACGTCCAAACACAATCAGGAACAGTCACGATAAATTCAGAAACACAAACACCACAAGAACAT]
consensusID : consensus_10173#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 403 fasta sequence
[CTGTGGAGATTTTAGTAATTTTATATAGTTGAGATTCGATGCGCACTGCTGAGGAGTCCCACAATAGGACGAAACGGCCGTCCAGTGCTTCCACGTTTTCCATGGTGGTCTAGCTTCAATTGACTCATGATCTCAACTATATAAAGTTAAAGAACAATTAGAAAAGAAATCCGGGATACATATGACGACTTGTTTAATCTTCCTTTGAGATTTCTCAACAGTTCATATTCAAAGAATAGAACTACAGACTATCACATGTAGAGGCTACTAGGCATACTGAATTAGAATTCAATAGTCAGCATTTACTATTTGACATTCATTATTGCCCTGTTCTTTGCTTGGTGAAAATAAGACAGTAACCATAGATCAACTGAGGTGTACTAGATTATACTTTTTTGTACAA]
[+] EMBL CD084755 [CTGTGGAGATTTTAGTAATTTTATATAGTTGAGATTCGATGCGCACTGCTGAGGAGTCCCACAATAGGACGAAACGGCCGTCCAGTGCTTCCACGTTTTCCATGGTGGTCTAGCTTCAATTGACTCATGATCTCAACTATATAAAGTTAAAGAACAATTAGAAAAGAAATCCGGGATACATATGACGACTTGTTTAATCTTCCTTTGAGATTTCTCAACAGTTCATATTCAAAGAATAGAACTACAGACTATCACATGTAGAGGCTACTAGGCATACTGAATTAGAATTCAATAGTCAGCATTTACTATTTGACATTCATTATTGCCCTGTTCTTTGCTTGGTGAAAATAAGACAGTAACCATAGATCAACTGAGGTGTACTAGATTATACTTTTTTGTACAA]
consensusID : consensus_10173#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 384 fasta sequence
[CCACCACCGGTTATCTTGCCACCAAAAGTATTCGACGTCCAAACACAATCAGGAACAGTCACGATAAATTCAGAAACACAAACACCACAAGAACATAGGCCAGTGGTTGCGACTAAAGATGCGAGTGTGTATCATGAAACAAGACCTGTTCAATCCGTTCCCAAGAAGTTACAGGCTATAGTCGTCCGACCACTAGAGAACATGGCTACACAAACAGATTTCTTAGCACAGCCTGTTGTTATGCCTATGGTGCAAACGACACATCATGAACCAATTGTACACAAAAAAACTACAAGCAATAGTACAACCACCGACAATTAACGCTGAGACTCAGACGATGGTAGAGAGACCACCACCGGTTATCTTGCCACCAAAAGTATTCGA]
[+] EMBL CD170607 [CCACCACCGGTTATCTTGCCACCAAAAGTATTCGACGTCCAAACACAATCAGGAACAGTCACGATAAATTCAGAAACACAAACACCACAAGAACATAGGCCAGTGGTTGCGACTAAAGATGCGAGTGTGTATCATGAAACAAGACCTGTTCAATCCGTTCCCAAGAAGTTACAGGCTATAGTCGTCCGACCACTAGAGAACATGGCTACACAAACAGATTTCTTAGCACAGCCTGTTGTTATGCCTATGGTGCAAACGACACATCATGAACCAATTGTACACAAAAAAACTACAAGCAATAGTACAACCACCGACAATTAACGCTGAGACTCAGACGATGGTAGAGAGACCACCACCGGTTATCTTGCCACCAAAAGTATTCGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10173#2 ------------------------------------------------------------
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 CCCTCCGAGGCCAANAATTCGGCACGAGGAAAAGTTGAGAAGAAAATTGGAACTAAAATT 60
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 ------------------------------------------------------------
consensus_10173#2 ------------------------------------------------------------
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 ACATTCTCTTATGAAACTGAAGCAATGGGAACTGCCGGTCCAATCGCCTTAGCTAAAGAT 120
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 ------------------------------------------------------------
consensus_10173#2 ------------------------------------------------------------
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 ATGCTCCTCGTGGACGATAGTCCATTTTTTGTGCTCAACAGTGATATCATGTGTGATTTC 180
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 ------------------------------------------------------------
consensus_10173#2 ------------------------------------------------------------
consensus_10173#3 --------------CACAAGAACATAGGCCAATAATCGAAGTGAAAGATTTGATTACACA 46
consensus_10173#5 ------------------------------------------CCACCACCGGTTATCTTG 18
consensus_10173#0 CCGTTCAAGGCAATCATGGCATTTCACAAAAATCATGGGAAGTCAGGAACTATTTTGGTG 240
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 -GATATTACGCGCGAATTCGCCCTTCGTGACCTCGATTATATGCAGAGGTCATTTATCCT 59
consensus_10173#2 -----------------------------------AAACTACAAGCAAT-AGTACAACCA 24
consensus_10173#3 ACACGAGAAACGTCCAGAGCCAATTGTACACAACAAAACTACAAGCAATCAGTACAACCA 106
consensus_10173#5 CCACCAAAAGTATTCGACGTCCA--------AACACAATCAGGAACAGTCACGATAAATT 70
consensus_10173#0 ACACAAGTTGAAGAACCTTCAAAATATGGTGTTGTTGTTTACGATCAAGCAACTGGACGT 300
consensus_10173#4 --------------------------------------------------------CTGT 4
consensus_10173#1 CTTCCATCTGTGATTTTTCGAATGTTTGATTACACTGAT-GTAATTAATCAAGATGAAAA 118
consensus_10173#2 CCGA-CAATTAACACT---GA--GACTCAG-ACGATG-GTAGAGA-GACCACCACCG-AT 74
consensus_10173#3 CCGAACAATTAACACTA--GA--AACTCAGCACGATG-GTAGAGAAGACCACCACCGGAT 161
consensus_10173#5 CAGAAACACAAACACCACAAG--AACATAGGCCAGTG-GTTGCGACTAAAGATGCGAGTG 127
consensus_10173#0 GTGGATCGTTTTGTTGAAAAACCAATTGAATTTGTTG-GTAATAA-GATAAATGCCGGTA 358
consensus_10173#4 GGAGATTTTAGTAATTTTATATAGTTGAGATTCGATGCGCACTGCTGAGGAGTCCCACAA 64
consensus_10173#1 CGAGATTGTTGGCCTATGTTC----TTGTGTTTGTGGTTCATGATGTGTCGTTTGCACCA 174
*
consensus_10173#2 TATC-TTGC--CACCA-AAAGTATTC-GAC-GTCC-AAACACAATC-AGGA--TCAGTCA 124
consensus_10173#3 TATCGTTGC--CACCATAAAGTATTCCGAC-GTCCCAAACACAATCCAGGA--ACAGTCA 216
consensus_10173#5 TGTATCATG--AAACAAGACCTGTTCAATCCGTTCCCAAGAAGTTACAGGCT-ATAGTCG 184
consensus_10173#0 TATACTTACTTAATCCTAGTGTTATTGATAGGATCCCTCTACGTCCAACTTCCATTGAGA 418
consensus_10173#4 TAGGACGAAACGGCCGTCCAGTGCTTCCACGTTTTCCATGGTGGTCTAGCTT--CAATTG 122
consensus_10173#1 TAGGCATAA--CAACAGGCTGTGCTAAGAAATCTGTTTGTGTAGCCATGTTCTCTAGTGT 232
* * * *
consensus_10173#2 CG-ATAAATTCA-GAAACACAA--ACACC-ACAAGAA-CATA-GGCCA-ATAATC-GAAG 175
consensus_10173#3 CGCATAAATTCACGAAACACAAC-ACACCCACAAGAAACATAAGGCCACATAATCCGAAG 275
consensus_10173#5 TCCGACCACTAG-AGAACATGGCTACACAAACAGATTTCTTA-----GCACAGCCTGTTG 238
consensus_10173#0 AAGAGATATTCCCAGAAATGGCGAACGAGAAACAACTCTATTGCATGACATTATCAGGGT 478
consensus_10173#4 ACTCATGATCTCAACTATATAAAGTTAAAGAACAATTAGA------AAAGAAATCCGGGA 176
consensus_10173#1 TCGGACGACTATAGCCTGTAACTTCTTGGGAACGGATTGAACAGGTCTTGTTTCATGATA 292
* * *
consensus_10173#2 TG-AAAGATTTGATT-ACA-CAACA--CG-AGAAACGTCCAGAGCCAATT--GTACACAA 227
consensus_10173#3 TGCAAAGATTTGATTGACA-CAACA--CGGAGAAACGTGCAGAGCCAATT--GTACACAA 330
consensus_10173#5 TT-ATGCCTATGGTGCAAA-CGACA--CA--------TCATGAACCAATT--GTACACAA 284
consensus_10173#0 TCTGGATGGATGTTGGACAACCTCA--TGATTTTCTCAAAGGTACAAATTT-GTATCTAA 535
consensus_10173#4 TACATATG-ACGACTTGTTTAATCT--TCCTTTGAGATTTCTCAACAGTTC-ATATTCAA 232
consensus_10173#1 CACACTCGCATCTTTAGTCGCAACCACTGGCCTATGTTCTTGTGGTGTTTGTGTTTCTGA 352
* ** * *
consensus_10173#2 AAAA-CTACAAGCAATAGTACAACC------ACCGACAATTAACACTGAGACTCA--GAC 278
consensus_10173#3 GAGAGCTACAAGCAATAGTACAACC------ACCGAAAATTAACACTGAGACTCA--GAC 382
consensus_10173#5 AAAAACTACAAGCAATAGTACAACC------ACCGACAATTAACGCTGAGACTCA--GAC 336
consensus_10173#0 ATTACTTAAAACAATCAGATCATTCGAAGGAACTAGCAACTGGATCTAATATTNCATGGG 595
consensus_10173#4 AGAA--TAGAACTA-CAGACTATC-------ACATGTAGAGGCTACTAGGCATACTGAAT 282
consensus_10173#1 ATTTATCGTGACTGTGCCTGCTTGTGTGTGGACGTCGAATACTTTTGGTGGCAAGATAAG 412
* ** *
consensus_10173#2 GATGG-TAGAGAGACCACCACCGGTTATCTTGCCACCAAAAGTATTCGACGTCCAAACAC 337
consensus_10173#3 GATGGGTAGAGAGACCACCACCGGTTATCTTGACACCAAAAGTATTCGACGTCCAAACAC 442
consensus_10173#5 GATGG-TAGAGAGACCACCACCGGTTATCTTGCCACCAAAAGTATTCGA----------- 384
consensus_10173#0 AATGTTTTAATACATC-CAACTGCTTCAGTTTCACCTACTTGTGTTCTTGGACCGAGTGT 654
consensus_10173#4 TAGAATTCAATA-GTCAGCATTTACTATTTGACATTCATTATTGCCCT--GTTC---TTT 336
consensus_10173#1 CGGTGGTGGTCTCTCTACCATCGTCTGAGTCTCAGTGTCTATTGTCGGTGGTTGTACTAT 472
* * * * *
consensus_10173#2 AATCAGGAACAGTCA-CGATAAATTCAGAAACACAAACACCACAAGAACATAGGCCAATA 396
consensus_10173#3 AATCAGGAACAGTCA-CGATAAATTCAGAAACACAAACACCACAAGAACAT--------- 492
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 TGTTATTGGACCAAA-GTGTATAGTTGAAGATGGAGTAAGAATTCGTAATTCAACCTTAC 713
consensus_10173#4 GCTTGGTGAAAATAA-GACAGTAACCATAGATCAACTGAGGTGTACTAGATTATACTTTT 395
consensus_10173#1 TGCTTGTAGTTTTTTTGTGTACAATTGGCTCTGGACGTTTCTCGTGTTGTGTAATCAAAT 532
consensus_10173#2 ATCGAAGTGAAAGATTTGATTACACAACACGAGAAACGTCCAGAGCCAATTGTACACAAA 456
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 TTCAAGGGAGTATTATTCGTTCGCATTCTTGGCTAGAAACTTGTATTATTGGTTGGCGGT 773
consensus_10173#4 TTGTACAA---------------------------------------------------- 403
consensus_10173#1 CTTTCACTTCGATTATTGGCCTATGTTCTTGTGGTGTTTGTGTTTCTGAATTTATCGTGA 592
consensus_10173#2 AAACTACAAGCAATAGTACAACCACCGACAATTAACACTGAGACTCAGACGATGGTAGAG 516
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 GTACTGTTGGGCAGTGGGTGAGAATGGAAAATGTCACCGTCTTAGGTGAAGATGTCATTG 833
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 CTGTTCCTGATTGTGTTTGGACGTCGAATACTTTTGGTGGCAAGATAATCGCCGTCAGCG 652
consensus_10173#2 AGACCACCACCGGTT--------------------------------------------- 531
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 TATCTGATGAATTATTTGTAAATGGTGCACGTGTACTACCACACAAAAGCATTGCTCAAT 893
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 AGATAAGGACG------------------------------------------------- 663
consensus_10173#2 ------------------------------------------------------------
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 CAGTTGTTGAACCGCAAATTATTATGTAATATGCCTGGGATGAAAACTCTTGTAAAAGTG 953
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 ------------------------------------------------------------
consensus_10173#2 ------------------------------------------------------------
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 CTGTGATCAAAACTCTTTCTTCTTTTCCTATACTCGTACTATTCTTATAATCGGTGCTAT 1013
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 ------------------------------------------------------------
consensus_10173#2 ------------------------------------------------------------
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 TCTATCGCCTTTTTATTTCAACAGTTTGTTTACTACATAGGAATATTATTTTTTTTTTGT 1073
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 ------------------------------------------------------------
consensus_10173#2 ------------------------------------------------------------
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 GTTCCACCGACTGCTGTTATAATTTTTATTTTGNTTAATTTCTTTCTTTTTTGTTCAATT 1133
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 ------------------------------------------------------------
consensus_10173#2 ------------------------------------------------------------
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 GAAAAATTGCCTTTCACTTATTTTGGACATTTTTATTACCAATGTATGGAACAAAATTTT 1193
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 ------------------------------------------------------------
consensus_10173#2 ------------------------------------------------------------
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 TATTTGTGATCCAGTGCTGTTTTTTTTTCTATTTTTGTTTTATGTTGTTAAAAGTTGATA 1253
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 ------------------------------------------------------------
consensus_10173#2 ------------------------------------------------------------
consensus_10173#3 ------------------------------------------------------------
consensus_10173#5 ------------------------------------------------------------
consensus_10173#0 GGATTTCGTGTGTTTTAATCAGTTGTTAGATTCAATACTGTTGAATAGTTTGCTTTTTGT 1313
consensus_10173#4 ------------------------------------------------------------
consensus_10173#1 ------------------------------------------------------------
consensus_10173#2 --------------------------------------
consensus_10173#3 --------------------------------------
consensus_10173#5 --------------------------------------
consensus_10173#0 GTTTTTTTATTATTTCTGTATTTAAATATATGCATCAT 1351
consensus_10173#4 --------------------------------------
consensus_10173#1 --------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||