cluster # 10181

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Schistosoma mansoni
cluster # 10181 cluster # 10181 Sequences # 14 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10181#0 length = 1506 sequences # 9

consensus_10181#1 length = 679 sequences # 4
consensus_10181#2 length = 456 sequences # 1

consensusID : consensus_10181#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1506
fasta sequence

                              [TACGATCATCAAGCATCATTATAACTGTGCCACGTGTATCTTTTCCTCGACGACCCGCGCGTCCTGACATCTGAATATATTCCCCAGGTGAAAGTAAACGGAAGTCGCGTCCATCAAACTTTCGAGTAGACGTGAATAACACAGATCGAGCAGGCATATTAAGACCCATCGCGAATGTTTCAGTAGCATACAATACTTTTATAAAACCCTCAGCAAATAGCACTTCAACAATTTCCTTGAGTATAGGCAACAACCCGCCATGATGAATACCGATTCCACGACGTAATACGGGTAATAAAATCTGAACCTGAGGAAGATTTCGATCGTCAACGGAAAGACTCTCAATGGCATTATTAAATACAAGTTCAATAGCCGCCTTTTCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCATAGCATAGAATTCACAATCCATCTTGCTAAATGAAAACACAATAAGCGGCTCCAAATTTTGGTCCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCATTACGTCCACGGGATTTCGTATCGGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTAAAGCAAGATTGAAGTTAGATTCAATAAACTCACGCTGGAAAACAAGCGATTAGAAACGAAAGAACGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGTTGTAATGGAACAGGACGACAATCAGTGTAAACAACGTGGCACGGTTTTCTATGTAAAAACACTATCCATTCAGCGAATTCACGAGCATTTGGAATTGTTGCACTTAGAAAAACAAGCCCAACACTATCAGGTAATAAAATGATGGTTTCCTCCCAGATAACACCGCGTTCTTTTTCCCTCATATAATGAATTTCATCAAAAATAACCCAGCCAACCTCACGAGTTACATCAGAGCTTCTGTACAACATAGATCTCAATATTTCTGTTGTCATTATAAGAACAGTTGCTTCTTGGTTGATAGTTATATCTCCAGTCATTAGGCCAACATCTTTAAAAATCTCCGAAAATTCGCGAAACTTCTGATTGCTCAGGGCCTTGATAGGCGTCGTGTAAATAACGCGCTGGTTTTGGTTCAGACTTTTAGCAACCGCGTACTCAGCAACTACGGTTTTACCAGCAGATGTATGGGCAGATACCATAACAGACTGCTCGTTTTCAATACACAGGATGGCACGTTGCTGAAATGGATCCAAAGTAAAGGGATAATTCCTTGCAGGATGTGCAAGATTTTTCAATTCATTGAGTGCACAATCAGCAGGATAGACAACCTCATGAATGCAACCGCTACCTGATAAAAGCACGTATGTTTGGAACTTTGGAAACTTTTTGAGACATCGTTTAACTTCGATTGAACCATCGGGAGCTTCTTTACATCTTAAGTTAAAAGAATTACCAATCTTAAAACAAATAATCTTTTGCCAAAACGTTTAGCTTCATGAAAAGCAAATG]

[+] EMBL CD158912             [TACGATCATCAAGCATCATTATAACTGTGCCACGTGTATCTTTTCCTCGACGACCCGCGCGTCCTGACATCTGAATATATTCCCCAGGTGAAAGTAAACGGAAGTCGCGTCCATCAAACTTTCGAGTAGACGTGAATAACACAGATCGAGCAGGCATATTAAGACCCATCGCGAATGTTTCAGTAGCATACAATACTTTTATAAAACCCTCAGCAAATAGCACTTCAACAATTTCCTTGAGTATAGGCAACAACCCGCCATGATGAATACCGATTCCACGACGTAATACGGGTAATAAAATCTGAACCTGAGGAAGATTTCGATCGTCAACGGAAAGACTCTCAATGGCATTATTAAATACAAGTTCAATAGCCGCCTTTTCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCATAGCATAGAATTCACAATCCATCTTGCTAAATGAAAACACAATAAGCGGCTCCAAATTTTGGTCCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCATTACGTCCACGGGATTTCGTATCGGAAATTGAATTGCCAGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD064458             [                    ATAACTGTGCCACGTGTATCTTTTCCTCGACGACCCGCGCGTCCTGACATCTGAATATATTCCCCAGGTGAAAGTAAACGGAAGTCGCGTCCATCAAACTTTCGAGTAGACGTGAATAACACAGATCGAGCAGGCATATTAAGACCCATCGCGAATGTTTCAGTAGCATACAATACTTTTATAAAACCCTCAGCAAATAACACTTCAACAATTTCCTTGAGTATAGGCAACAACCCGCCATGATGAATACCGATTCCACGACGTAATACGGGTAATAAAATCTGAACCTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD160744             [                                                                                                                                                                                                                                                                                                                                                          GGCATTATTAAATACAAGTTCAATAGCCGCCTTTTCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCATAGCATAGAATTCACAATCCATCTTGCTAAATGAAAACACAATAAGCGGCTCCAAATTTTGGTCCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCATTACGTCCACGGGATTTCGTATCAGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTAAAGCAAGATTGAAGTTAGATTCAATAAACTCACGCTGGAAAACAAGCGATTAGAAACGAAAGAACGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGTTGTAATGGAACAGGACGACAATCAGTGTAAACAACGTGGCACGGTTTTCTATGTAAAAACACTATCCATTCAGCGAATTCACGAGCATTTGGAATTGTTGCACTTAGAAAAACAAGCCCAACACTATCAGGTAATAAAATGATGGTTTCCTCCCAGATAACACCGCGTTCTTTTTCCCTCATATAATGAATTTCATCANAAATAACCCAGCCAACCTCACGAGTTACATCAGAGCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD161774             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGTTGTAATGGAACAGGACGACAATCAGTGTAAACAACGTGGCACGGTTTTCTATGTAAAAACACTATCCATTCAGCGAATTCACGAGCATTTGGAATTGTTGCACTTAGAAAAACAAGCCCAACACTATCAGGTAATAAAATGATGGTTTCCTCCCAGATAACACCGCGTTCTTTTTCCCTCATATAATGAATTTCATCAAAAATAACCCAGCCAACCTCACGAGTTACATCAGAGCTTCTGTACAACATAGATCTCAATATTTCTGTTGTCATTATAAGAACAGTTGCTTCTTGGTTGATAGTTATATCTCCAGTCATTAGGCCAACATCTTTAAAAATCTCCGAAAATTCGCGAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD165819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCCTCATATAATGAATTTCATCAAAAATAACCCAGCCAACCTCACGAGTTACATCAGAGCTTCTGTACAACATAGATCTCAATATTTCTGTTGTCATTATAAGAACAGTTGCTTCTTGGTTGATAGTTATATCTCCAGTCATTAGGCCAACATCTTTAAAAATCTCCGAAAATTCGCGAAACTTCTGATTGCTCAGGGCCTTGATAGGCGTCGTGTAAATAACGCGCTGGTTTTGGTTCAGACTTTTAGCAACCGCGTACTCAGCAACTACGGTTTTACCAGCAGATGTATGGGCAGATACCATAACAGACTGCTCGTTTTCAATACACAGGATGGCACGTTGCTGAAATGGATCCAAAGTAAAGGGATAATTCCTTGCAGGATGTGCAAGATTTTTCAATTCATTGAGTGCACAATCAGCAGGATAGACAACCTCATGAATGCAACCG                                                                                                                                                                     ]
[+] EMBL CD165915             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCCTCATATAATGAATTTCATCAAAAATAACCCAGCCAACCTCACGAGTTACATCAGAGCTTCTGTACAACATAGATCTCAATATTTCTGTTGTCATTATAAGAACAGTTGCTTCTTGGTTGATAGTTATATCTCCAGTCATTAGGCCAACATCTTTAAAAATCTCCGAAAATTCGCGAAACTTCTGATTGCTCAGGGCCTTGATAGGCGTCGTGTAAATGACGCGCTGGTTTTGGTTCAGACTTTTAGCAACCGCGTACTCAGCAACTACGGTTTTACCAGCAGATGTATGGGCAGATACCATAACAGACTGCTCGTTTTCAATACACAGGATGGCACGTTGCTGAAATGGATCCAAAGTAAAGGGATAATTCCTTGCAGGATGTGCAAGATTTTTCAATTCATTGAGTGCACAATCAGCAGGATAGACAACCTCATGAATGCAACCGCTACCTGATAAAAGCACGTATGTTTGG                                                                                                                                          ]
[+] EMBL CD136738             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCATCAAAAATAACCCAGCCAACCTCACGAGTTACATCAGAGCTTCTGTACAACATAGATCTCAATATTTCTGTTGTCATTATAAGAACAGTTGCTTCTTGGTTGATAGTTATATCTCCAGTCATTAGGCCAACATCTTTAAAAATCTCCGAAAATTCGCGAAACTTCTGATTGCTCAGGGCCTTGATAGGCGTCGTGTAAATAACGCGCTGGTTTTGGTTCAGACTTTTAGCAACCGCGTACTCAGCAACTACGGTTTTACCAGCAGATGTATGGGCAGATACCATAACAGACTGCTCGTTTTCAATACACAGGATGGCACGTTGCTGAAATGGATCCAAAATAAAGGGATAATTCCTTGCAGGATGTGCAAGATTTTTCAATTCATTGAGTGCACAATCAGCAGGATAGACA                                                                                                                                                                                       ]
[-] EMBL CD193851             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATGTATGGGCAGATACCATAACAGACTGCTCGTTTTCAATACACAGGATGGCACGTTGCTGAAATGGATCCAAAGTAAAGGGATAATTCCTTGCAGGATGTGCAAGATTTTTCAATTCATTGAGTGCACAATCAGCAGGATAGACAACCTCATGAATGCAACCGCTACCTGATAAAAGCACGTATGTTTGGAACTTTGGAAACTTTTTGAGACATCGTTTAACTTCGATTGAACCATCGGGAGCTT                                                                                   ]
[+] EMBL CD068993             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCATGAATGCAACCGCTACCTGATAAAAGCACGTATGTTTGGAACTTTGGAAACTTCTTGAGACATCGTTTAACTTCGATTGAACCATCGGGAGCTTCTTTACATCTTAAGTTAAAAGAATTACCAATCTTAAAACAAATAATCTTTTGCCAAAACGTTTAGCTTCATGAAAAGCAAATG]




>consensus_10181#0
TACGATCATCAAGCATCATTATAACTGTGCCACGTGTATCTTTTCCTCGACGACCCGCGC
GTCCTGACATCTGAATATATTCCCCAGGTGAAAGTAAACGGAAGTCGCGTCCATCAAACT
TTCGAGTAGACGTGAATAACACAGATCGAGCAGGCATATTAAGACCCATCGCGAATGTTT
CAGTAGCATACAATACTTTTATAAAACCCTCAGCAAATAGCACTTCAACAATTTCCTTGA
GTATAGGCAACAACCCGCCATGATGAATACCGATTCCACGACGTAATACGGGTAATAAAA
TCTGAACCTGAGGAAGATTTCGATCGTCAACGGAAAGACTCTCAATGGCATTATTAAATA
CAAGTTCAATAGCCGCCTTTTCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCATAG
CATAGAATTCACAATCCATCTTGCTAAATGAAAACACAATAAGCGGCTCCAAATTTTGGT
CCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCATTAC
GTCCACGGGATTTCGTATCGGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTAAAG
CAAGATTGAAGTTAGATTCAATAAACTCACGCTGGAAAACAAGCGATTAGAAACGAAAGA
ACGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGTTGT
AATGGAACAGGACGACAATCAGTGTAAACAACGTGGCACGGTTTTCTATGTAAAAACACT
ATCCATTCAGCGAATTCACGAGCATTTGGAATTGTTGCACTTAGAAAAACAAGCCCAACA
CTATCAGGTAATAAAATGATGGTTTCCTCCCAGATAACACCGCGTTCTTTTTCCCTCATA
TAATGAATTTCATCAAAAATAACCCAGCCAACCTCACGAGTTACATCAGAGCTTCTGTAC
AACATAGATCTCAATATTTCTGTTGTCATTATAAGAACAGTTGCTTCTTGGTTGATAGTT
ATATCTCCAGTCATTAGGCCAACATCTTTAAAAATCTCCGAAAATTCGCGAAACTTCTGA
TTGCTCAGGGCCTTGATAGGCGTCGTGTAAATAACGCGCTGGTTTTGGTTCAGACTTTTA
GCAACCGCGTACTCAGCAACTACGGTTTTACCAGCAGATGTATGGGCAGATACCATAACA
GACTGCTCGTTTTCAATACACAGGATGGCACGTTGCTGAAATGGATCCAAAGTAAAGGGA
TAATTCCTTGCAGGATGTGCAAGATTTTTCAATTCATTGAGTGCACAATCAGCAGGATAG
ACAACCTCATGAATGCAACCGCTACCTGATAAAAGCACGTATGTTTGGAACTTTGGAAAC
TTTTTGAGACATCGTTTAACTTCGATTGAACCATCGGGAGCTTCTTTACATCTTAAGTTA
AAAGAATTACCAATCTTAAAACAAATAATCTTTTGCCAAAACGTTTAGCTTCATGAAAAG
CAAATG

consensusID : consensus_10181#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 679
fasta sequence

                              [CAGGCATATTAAGACCCATCGCGAATGTTNCAGTAGCATACAATACTTTTATAAAACCCTCAGCAAATAACACTTCAACAATTTCCTTGAGTATAGGCAACAACCCGCCATGATGAATACCGATTCCACGACGTAATACGGGTAATANAATCTGAACCTGAGGAAGATTTCGATCGTCAACGGAAAGACTCTCAATGGCATTATTAAATACAAGTTCAATAGCCGCCTTTTCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCATAGCATAGAATTCACAATCCATCTTGCTAAATGAAAACACAATAAGCGGCTCCAAATTTTGGTCCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCATTACGTCCACGGGATTTCGTATCAGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTAAAGCAAGATTGAAGTTAGATTCAATAAACTCACGGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGTTGTAATGGAACAGGACGACAATCAGTGTAAACAACGTGGCACGGTTTTCTATGTAAAAACACTATCCATTCAGCGAATTCACGAGCATTTGGAATTGTTGCACTTAGAAAAACAAGGCCAACACTATCAGGTAATAAAATGAT]

[-] EMBL CD159034             [CAGGCATATTAAGACCCATCGCGAATGTTNCAGTAGCATACAATACTTTTATAAAACCCTCAGCAAATAACACTTCAACAATTTCCTTGAGTATAGGCAACAACCCGCCATGATGAATACCGATTCCACGACGTAATACGGGTAATANAATCTGAACCTGAGGAAGATTTCGATCGTCAACGGAAAGACTCTCAATGGCATTATTAAATACAAGTTCAATAGCCGCCTTTTCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCATAGCATAGAATTCACAATCCATCTTGCTAAATGAAAACACAATAAGCGGCTCCAAATTTTGGTCCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCATTACGTCCACGGGATTTCGTATCAGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTAAAGCAAGATTGAAGTTAGATTCAATAAACTCACGGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGTTGTAATGGAACAGGACGACAATCAGTGTAAACAACGTGGCACGGTTTTCTATGTAAA                                                                                      ]
[-] EMBL CD159001             [                                      TACAATACTNTTATAAAACCCTCAGCGAATANCACTTCAACAATTTCCTTGAGTATAGGCAACAACCCGCCATGATGAATACCGATTCCACGACGTAATACGGGTAATAAAATCTGAACCTGAGGAAGATTTCGATCGTCAACGGAAAGACTCTCAATGGCATTATTAAATACAAGTTCAATAGCCGCCTTTTCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCATAGCATAGAATTCACAATCCATCTTGCTAAATGAAAACACAATAAGCGGCTCCAAATTTTGGTCCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCATTACGTCCACGGGATTTCGTATCAGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTAAAGCAAGATTGAAGTTAGATTCAATAAACTCACGGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGTTGTAATGGAACAGGACGACAATCAGTGTAAACAACGTGGCACGGTTTTCTATGTAAA                                                                                      ]
[+] EMBL CD188215             [                                                                                                                                                                                                                                                         CCATTTTGTTTAGTTGCATAGCATAGAATTCACAATCCATCTTGCTAAATGAAAACACAATGAGCGGCTCCAAATTTTGGTCCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCATTACGTCCACGGGATTTCGTATCAGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTAAAGCAAGATTGAAGTTAGATTCAATAAACTCACGGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGTTGTAATGGAACAGGACGACAATCAGTGTAAACAACGTGGCACGGTTTTCTATGTAAAAACACTATCCATTCAGCGAATTCACGAGCATTTGGAATTGTTGCACTTAGAAAAACAAGGCCAACACTATCAGGTAATAAAATGAT]
[-] EMBL CD064034             [                                                                                                                                                                                                                                                                                                                                                                  cGCATTATGGTTGAGGACGGGTGCTGCCACCATTACGTCCGCGGGATTTCGTATCAGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTAAAGCAAGATTGAAGTTAGATTCAATAAACTCACGGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGTCGTAATGGAACAGGACGACAATCAGTGTAAACA                                                                                                              ]




>consensus_10181#1
CAGGCATATTAAGACCCATCGCGAATGTTNCAGTAGCATACAATACTTTTATAAAACCCT
CAGCAAATAACACTTCAACAATTTCCTTGAGTATAGGCAACAACCCGCCATGATGAATAC
CGATTCCACGACGTAATACGGGTAATANAATCTGAACCTGAGGAAGATTTCGATCGTCAA
CGGAAAGACTCTCAATGGCATTATTAAATACAAGTTCAATAGCCGCCTTTTCTGATTCTG
TACTAAAATCCATTTTGTTTAGTTGCATAGCATAGAATTCACAATCCATCTTGCTAAATG
AAAACACAATAAGCGGCTCCAAATTTTGGTCCATTACCAACTTAACTAACTTCGAGCAAT
ATGGTTGAGGACGGGTGCTGCCACCATTACGTCCACGGGATTTCGTATCAGAAATTGAAT
TGCCAGCCGCATTTTGTAAAGTATTTAAAGCAAGATTGAAGTTAGATTCAATAAACTCAC
GGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGTTGTA
ATGGAACAGGACGACAATCAGTGTAAACAACGTGGCACGGTTTTCTATGTAAAAACACTA
TCCATTCAGCGAATTCACGAGCATTTGGAATTGTTGCACTTAGAAAAACAAGGCCAACAC
TATCAGGTAATAAAATGAT

consensusID : consensus_10181#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 456
fasta sequence

                              [TGCTCCCGGTCGCCATGGCGGNAATTCGATTTTTATTGTANAGGAACCGGAGGAAGATTTCGATCGTCAACGGAAAGACTCTCAATGGCATTATTAAATACAAGTTCAATAGCCGCCTTTTCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCATAGCATAGAATTCGCAATCCATCTTGCTGAATGAAAACACAATAAGCGGCTCCAAATTTTGGTCCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCATTACGTCCACGGGATTTCGTATCAGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTAAAGCAAGATTGAAGTTAGATTCAATAAACTCACGGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGTTGTAATGGAACAGGACGACAATCAGTGTAA]

[+] EMBL CD161772             [TGCTCCCGGTCGCCATGGCGGNAATTCGATTTTTATTGTANAGGAACCGGAGGAAGATTTCGATCGTCAACGGAAAGACTCTCAATGGCATTATTAAATACAAGTTCAATAGCCGCCTTTTCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCATAGCATAGAATTCGCAATCCATCTTGCTGAATGAAAACACAATAAGCGGCTCCAAATTTTGGTCCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCATTACGTCCACGGGATTTCGTATCAGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTAAAGCAAGATTGAAGTTAGATTCAATAAACTCACGGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGTTGTAATGGAACAGGACGACAATCAGTGTAA]




>consensus_10181#2
TGCTCCCGGTCGCCATGGCGGNAATTCGATTTTTATTGTANAGGAACCGGAGGAAGATTT
CGATCGTCAACGGAAAGACTCTCAATGGCATTATTAAATACAAGTTCAATAGCCGCCTTT
TCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCATAGCATAGAATTCGCAATCCATC
TTGCTGAATGAAAACACAATAAGCGGCTCCAAATTTTGGTCCATTACCAACTTAACTAAC
TTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCATTACGTCCACGGGATTTCGTATCA
GAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTAAAGCAAGATTGAAGTTAGATTCA
ATAAACTCACGGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACA
TAGTGTTGTAATGGAACAGGACGACAATCAGTGTAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10181#0      TACGATCATCAAGCATCATTATAACTGTGCCACGTGTATCTTTTCCTCGACGACCCGCGC 60
consensus_10181#1      ------------------------------------------------------------
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      GTCCTGACATCTGAATATATTCCCCAGGTGAAAGTAAACGGAAGTCGCGTCCATCAAACT 120
consensus_10181#1      ------------------------------------------------------------
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      TTCGAGTAGACGTGAATAACACAGATCGAGCAGGCATATTAAGACCCATCGCGAATGTTT 180
consensus_10181#1      ------------------------------CAGGCATATTAAGACCCATCGCGAATGTTN 30
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      CAGTAGCATACAATACTTTTATAAAACCCTCAGCAAATAGCACTTCAACAATTTCCTTGA 240
consensus_10181#1      CAGTAGCATACAATACTTTTATAAAACCCTCAGCAAATAACACTTCAACAATTTCCTTGA 90
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      GTATAGGCAACAACCCGCCATGATGAATACCGATTCCACGACG-TAATACGGGTAATAAA 299
consensus_10181#1      GTATAGGCAACAACCCGCCATGATGAATACCGATTCCACGACG-TAATACGGGTAATANA 149
consensus_10181#2      -----------------------TGCTCCCGGTCGCCATGGCGGNAATTCGATTTTTATT 37
                                              **    * *   *** * **  *** **  *  **  

consensus_10181#0      ATCT--GAACCTGAGGAAGATTTCGATCGTCAACGGAAAGACTCTCAATGGCATTATTAA 357
consensus_10181#1      ATCT--GAACCTGAGGAAGATTTCGATCGTCAACGGAAAGACTCTCAATGGCATTATTAA 207
consensus_10181#2      GTANAGGAACCGGAGGAAGATTTCGATCGTCAACGGAAAGACTCTCAATGGCATTATTAA 97
                        *    ***** ************************************************

consensus_10181#0      ATACAAGTTCAATAGCCGCCTTTTCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCA 417
consensus_10181#1      ATACAAGTTCAATAGCCGCCTTTTCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCA 267
consensus_10181#2      ATACAAGTTCAATAGCCGCCTTTTCTGATTCTGTACTAAAATCCATTTTGTTTAGTTGCA 157
                       ************************************************************

consensus_10181#0      TAGCATAGAATTCACAATCCATCTTGCTAAATGAAAACACAATAAGCGGCTCCAAATTTT 477
consensus_10181#1      TAGCATAGAATTCACAATCCATCTTGCTAAATGAAAACACAATAAGCGGCTCCAAATTTT 327
consensus_10181#2      TAGCATAGAATTCGCAATCCATCTTGCTGAATGAAAACACAATAAGCGGCTCCAAATTTT 217
                       ************* ************** *******************************

consensus_10181#0      GGTCCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCAT 537
consensus_10181#1      GGTCCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCAT 387
consensus_10181#2      GGTCCATTACCAACTTAACTAACTTCGAGCAATATGGTTGAGGACGGGTGCTGCCACCAT 277
                       ************************************************************

consensus_10181#0      TACGTCCACGGGATTTCGTATCGGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTA 597
consensus_10181#1      TACGTCCACGGGATTTCGTATCAGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTA 447
consensus_10181#2      TACGTCCACGGGATTTCGTATCAGAAATTGAATTGCCAGCCGCATTTTGTAAAGTATTTA 337
                       ********************** *************************************

consensus_10181#0      AAGCAAGATTGAAGTTAGATTCAATAAACTCACGCTGGAAAACAAGCGATTAGAAACGAA 657
consensus_10181#1      AAGCAAGATTGAAGTTAGATTCAATAAACTCACG-------------------------- 481
consensus_10181#2      AAGCAAGATTGAAGTTAGATTCAATAAACTCACG-------------------------- 371
                       **********************************                          

consensus_10181#0      AGAACGTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGT 717
consensus_10181#1      -----GTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGT 536
consensus_10181#2      -----GTTCTGATTGACTACCAAATGAATTCCATCTCCACCACATGGGTAAACATAGTGT 426
                            *******************************************************

consensus_10181#0      TGTAATGGAACAGGACGACAATCAGTGTAAACAACGTGGCACGGTTTTCTATGTAAAAAC 777
consensus_10181#1      TGTAATGGAACAGGACGACAATCAGTGTAAACAACGTGGCACGGTTTTCTATGTAAAAAC 596
consensus_10181#2      TGTAATGGAACAGGACGACAATCAGTGTAA------------------------------ 456
                       ******************************                              

consensus_10181#0      ACTATCCATTCAGCGAATTCACGAGCATTTGGAATTGTTGCACTTAGAAAAACAAGCCCA 837
consensus_10181#1      ACTATCCATTCAGCGAATTCACGAGCATTTGGAATTGTTGCACTTAGAAAAACAAGGCCA 656
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      ACACTATCAGGTAATAAAATGATGGTTTCCTCCCAGATAACACCGCGTTCTTTTTCCCTC 897
consensus_10181#1      ACACTATCAGGTAATAAAATGAT------------------------------------- 679
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      ATATAATGAATTTCATCAAAAATAACCCAGCCAACCTCACGAGTTACATCAGAGCTTCTG 957
consensus_10181#1      ------------------------------------------------------------
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      TACAACATAGATCTCAATATTTCTGTTGTCATTATAAGAACAGTTGCTTCTTGGTTGATA 1017
consensus_10181#1      ------------------------------------------------------------
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      GTTATATCTCCAGTCATTAGGCCAACATCTTTAAAAATCTCCGAAAATTCGCGAAACTTC 1077
consensus_10181#1      ------------------------------------------------------------
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      TGATTGCTCAGGGCCTTGATAGGCGTCGTGTAAATAACGCGCTGGTTTTGGTTCAGACTT 1137
consensus_10181#1      ------------------------------------------------------------
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      TTAGCAACCGCGTACTCAGCAACTACGGTTTTACCAGCAGATGTATGGGCAGATACCATA 1197
consensus_10181#1      ------------------------------------------------------------
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      ACAGACTGCTCGTTTTCAATACACAGGATGGCACGTTGCTGAAATGGATCCAAAGTAAAG 1257
consensus_10181#1      ------------------------------------------------------------
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      GGATAATTCCTTGCAGGATGTGCAAGATTTTTCAATTCATTGAGTGCACAATCAGCAGGA 1317
consensus_10181#1      ------------------------------------------------------------
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      TAGACAACCTCATGAATGCAACCGCTACCTGATAAAAGCACGTATGTTTGGAACTTTGGA 1377
consensus_10181#1      ------------------------------------------------------------
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      AACTTTTTGAGACATCGTTTAACTTCGATTGAACCATCGGGAGCTTCTTTACATCTTAAG 1437
consensus_10181#1      ------------------------------------------------------------
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      TTAAAAGAATTACCAATCTTAAAACAAATAATCTTTTGCCAAAACGTTTAGCTTCATGAA 1497
consensus_10181#1      ------------------------------------------------------------
consensus_10181#2      ------------------------------------------------------------
                                                                                   

consensus_10181#0      AAGCAAATG 1506
consensus_10181#1      ---------
consensus_10181#2      ---------