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Schistosoma mansoni
cluster # 10182 cluster # 10182       Sequences # 14       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10182#0 length = 1047 sequences # 5  
consensus_10182#1 length = 601 sequences # 2  
consensus_10182#2 length = 570 sequences # 3  
consensus_10182#3 length = 340 sequences # 3  
consensus_10182#4 length = 239 sequences # 1  

consensusID : consensus_10182#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1047
fasta sequence
                              [TAATATTTATTTCAATGCAAATTACCTTTTACATTTATTTAATGAAGTTGGGATATAGGAAATACCAAAAAAAGAGTAAAAAATATTGGAAAAATATAACTGATTTTAGCCACTATGGCCACTGAAATGTTTCTGATGCAAAGAGTGTATCAGGAAGTTCATCACGTTTCAGGTAACTAGATTGTGTCCCTTTTTTACGGATTGATTGGCTGGCAACCCAAACCGATCGTCTTATTTGTTCAGCCAGAGTAATGTCCTCGTGACACGCGACAAAGTAAGCTAGTGAGCCAACAAAACAGTCTCCTGCTCCTGTTGTGTCAACAACATCAAAGTTACTGGGTGCTGAGAAGTGTACTACCAACTTCTCTTGGTTTTCAAAAGTAATACGAGCCACTTCGCTAGCGTCTTTGGCATATATATTTGCCATATCTTGTTCAGATAAAATTGCAATAACTCCTTTACTCCCTAGAGTTACTATGGGGCATTTGATTTTCTTTTCAAGTAAGTAGGCAAGACCAGGAATAAAAGCATCTATATTCAGTGAGCCAATCTCATTTTTGGAAAAAAAGTGATCCAGAGTCAGACTCGGTTATGGAACAAAATTCGGACTCATTTGGACACACAAAATCACAATTTGGTAAAATATCTTCCATTAATTCGTAATTCCCCAAAATCTCAGGATTTCCAGAAGCCACTGGCGCAGGTGCGGGATTTAAAATTGTCTTTGCACCTTTGGCACGACCAAGCCTCAAACTATAGAGTGTTGCAGATGGATTGATTTCAAACTGGCAAACTATTACTTTTGTATCCAAGAGGGTTAGTTTCTCTGCAAAGGAAATGTCTTTTTCTGATACAAGCATATTTGCACCTGGGACGATGATAATTTGATTTCCACCTGTTCCTGTTTCAACTGTAATTGATGCAACTCCAGTACTATTCATTGATGATCTTGATATACCGTCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTG]

[+] EMBL CD076920             [TAATATTTATTTCAATGCAAATTACCTTTTACATTTATTTAATGAAGTTGGGATATAGGAAATACCAAAAAAAGAGTAAAAAATATTGGAAAAATATAACTGATTTTAGCCACTATGGCCACTGAAATGTTTCTGATGCAAAGAGTGTATCAGGAAGTTCATCACGTTTCAGGTAACTAGATTGTGTCCCTTTTTTACGGATTGATTGGCTGGCAACCCAAACCGATCGTCTTATTTGTTCAGCCAGAGTAATGTCCTCGTGACACGCGACAAAGTAAGCTAGTGAGCCAACAAAACAGTCTCCTGCTCCTGTTGTGTCAACAACATCAAAGTTACTGGGTGCTGAGAAGTGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD115258             [                                                                                                                                                                                 TAGATTGTGTCCCTTTTTTACGGATTGATTGGCTGGCAACCCAAACCGATCGTCTTATTTGTTCAGCCAGAGTAATGTCCTCGTGACACGCGACAAAGTAAGCTAGTGAGCCAACAAAACAGTCTCCTGCTCCTGTTGTGTCAACAACATCAAAGTTACTGGGTGCTGAGAAGTGTACTACCAACTTCTCTTGGTTTTCAAAAGTAATACGAGCCACTTCGCTAGCGTCTTTGGCATATATATTTGCCATATCTTGTTCAGATAAAATTGCAATAACTCCTTTACTCCCTAGAGTTACTATGGGGCATTTGATTTTCTTTTCAAGTAAGTAGGCAAGACCAGGAATAAAAGCATCTATATTCAGTGAGCCAATCTCATTTTTGGAAAAAAAGTGATCCAGAGTCAGACTCGGTTATGGAACAAAATTCGGACTCATTTGGACACACAAAATCACAATTTGGTAAAATATCTTCCATTAATTCGTAATTCCCCAAAATCTCAGGATTTCCAGAAGCCACTGGCGCAGGTGCGGGATTTAAAATTGTCTTTGCACCTTTGGCACGACCAAGCC                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD185148             [                                                                                                                                                                                                              TGGCTGGCAACCCAAACCGATCGTCTTATTTGTTCAGCCAGAGTAATGTCCTCGTGACACGCGACAAAGTAAGCTAGTGAGCCAACAAAACAGTCTCCTGCTCCTGTTGTGTCAACAACATCAAAGTTACTGGGTGCTGAGAAGTGTACTACCAACTTCTCTTGGTTTTCAAAAGTAATACGAGCCACTTCGCTAGCGTCTTTGGCATATATATTTGCCATATCTTGTTCAGATAAAATTGCAATAACTCCTTTACTCCCTAGAGTTACTATGGGGCATTTGATTTTCTTTTCAAGTAAGTAGGCAAGACCAGGAATAAAAGCATCTATATTCAGTGAGCCAATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD195206             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TATGGAACAAATGTCGGACTCATTTGGACACACAGAATCGCAATTTGGTAATATATCTTCCATTAATTCGTAATTCCCCAAAATCTCAGGATTTCCAGAAGCCACTGGCGCAGGTGCGGGATTTAAAATTGTCTTTGCACCTTTGGCACGACCAAGCCTCAAACTATAGAGTGTTGCAGATGGATTGATTTCAAACTGGCAAACTATTACTTTTGTATCCAAGAGGGTTAGTTTCTCTGCAAAGGAAATGTCTTTTTCTGATACAAGCATATTTGCACCTGGGACGATGATAATTTGATTTCCACCTGTTCCTGTTTCAACTGTAATTGATGCAACTCCAGTACTATTCATTGATGATCTTGATATACCGTCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTG]
[-] EMBL CD195364             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   gatagctaaTCAAATCAT GA   TTGCA ACAAAGTCACTTCAAACTGGCAAACTATTACTTTTGTATCCAAGAGGGTTAGTTTCTCTGCAAAGGGAATGTCTTTTTCTGATACAAGCATATTTGCACCTGGGACGATGATAATTTGATTTCCACCTGTTCCTGTTTCAACTGTAATTGATGCAACTCCAGTACTACTCATTGATGATCTTGATATACCGTCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTG]


>consensus_10182#0 TAATATTTATTTCAATGCAAATTACCTTTTACATTTATTTAATGAAGTTGGGATATAGGA AATACCAAAAAAAGAGTAAAAAATATTGGAAAAATATAACTGATTTTAGCCACTATGGCC ACTGAAATGTTTCTGATGCAAAGAGTGTATCAGGAAGTTCATCACGTTTCAGGTAACTAG ATTGTGTCCCTTTTTTACGGATTGATTGGCTGGCAACCCAAACCGATCGTCTTATTTGTT CAGCCAGAGTAATGTCCTCGTGACACGCGACAAAGTAAGCTAGTGAGCCAACAAAACAGT CTCCTGCTCCTGTTGTGTCAACAACATCAAAGTTACTGGGTGCTGAGAAGTGTACTACCA ACTTCTCTTGGTTTTCAAAAGTAATACGAGCCACTTCGCTAGCGTCTTTGGCATATATAT TTGCCATATCTTGTTCAGATAAAATTGCAATAACTCCTTTACTCCCTAGAGTTACTATGG GGCATTTGATTTTCTTTTCAAGTAAGTAGGCAAGACCAGGAATAAAAGCATCTATATTCA GTGAGCCAATCTCATTTTTGGAAAAAAAGTGATCCAGAGTCAGACTCGGTTATGGAACAA AATTCGGACTCATTTGGACACACAAAATCACAATTTGGTAAAATATCTTCCATTAATTCG TAATTCCCCAAAATCTCAGGATTTCCAGAAGCCACTGGCGCAGGTGCGGGATTTAAAATT GTCTTTGCACCTTTGGCACGACCAAGCCTCAAACTATAGAGTGTTGCAGATGGATTGATT TCAAACTGGCAAACTATTACTTTTGTATCCAAGAGGGTTAGTTTCTCTGCAAAGGAAATG TCTTTTTCTGATACAAGCATATTTGCACCTGGGACGATGATAATTTGATTTCCACCTGTT CCTGTTTCAACTGTAATTGATGCAACTCCAGTACTATTCATTGATGATCTTGATATACCG TCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACCAAAATAGTCATCG CCAACTTTTCCTACCAGTGCAGTGTTG



consensusID : consensus_10182#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 601
fasta sequence
                              [TTTCACTCTCATAATAAATACGACTGGAAGCTACAGCACGATCGTCACAGTTTAGAATAACGAGAGTTCTTGATGACATGGTGTAAACTGGAACTTTTGTGGTGAGATAAGGCCAAAGATGACTTCAGATAAGCCATTGAGTGGGTTCCCTTAAGCATACATGAGGAGAAATATATATGAAAATGCCACATATTTATTTTGCTTACGCTAAGAAGTATGTGATTTATTACACAAGCCAATGAGAATTCCCGTTTCTTCAGCAATAAGACAAAGAACAACTTGGTTAAACCCTGAAACCCAAAAATCGTTCCTTGTGTGTGTNTGAAGTAGACAGGAGTTTATGATTTATTACAACACTAACAAGGCGTGTATATGCAACGTTGAGCTAGTCTACAGTCCTCTATATGCTCGATTTTTGTTGTCGATGAAGTTGAAGACGCTTTTGCTTGGTGTGTGTATTCGTATGATTGTTTACAATTTTACTGAGATGTCTAGGCAATGAACCTTAGCGTTCGCATCATACGAAAACATACTAAGCTCAATAGACATGTTAGGGTTTGCGGCATAATTGATAGCTAATCAAATCATGATTGCTACAAAC]

[+] EMBL CD196718             [TTTCACTCTCATAATAAATACGACTGGAAGCTACAGCACGATCGTCACAGTTTAGAATAACGAGAGTTCTTGATGACATGGTGTAAACTGGAACTTTTGTGGTGAGATAAGGCCAAAGATGACTTCAGATAAGCCATTGAGTGGGTTCCCTTAAGCATACATGAGGAGAAATATATATGAAAATGCCACATATTTATTTTGCTTACGCTAAGAAGTATGTGATTTATTACACAAGCCAATGAGAATTCCCGTTTCTTCAGCAATAAGACAAAGAACAACTTGGTTAAACCCTGAAACCCAAAAATCGTTCCTTGTGTGTGTNTGAAGTAGACAGGAGTTTATGATTTATTACAACACTAACAAGGCGTGTATATGCAACGTTGAGCTAGTCTACAGTCCTCTATATGCTCGAT                                                                                                                                                                                            ]
[-] EMBL CD069507             [                                                                                                                               GATAAGCCATTGAGTGGGTTCCCTCAAGCATACATGAGGAGAAATATATATGAAAATGCCACATATTTATTTTGCTTACGCTAAGAAGTATGTGATTTATTACACAAGCCAATGAGAATTCCCGTTTCTTCAGCAATAAGACTAAGAACAACTTGGTTAAACCCTGAAACCCAAAAATCGTTCCTTGTGTGTGTTTGAAGTAGACAGGAGTTTATGATTTATTACAACACTAACAAGGCGTGTATATGCAACGTTGAGCTAGTCTACAGTCCTCTATATGCTCGATTTTTGTTGTCGATGAAGTTGAAGACGCTTTTGCTTGGTGTGTGTATTCGTATGATTGTTTACAATTTTACTGAGATGTCTAGGCAATGAACCTTAGCGTTCGCATCATACGAAAACATACTAAGCTCAATAGACATGTTAGGGTTTGCGGCATAATTGATAGCTAATCAAATCATGATTGCTACAAAC]


>consensus_10182#1 TTTCACTCTCATAATAAATACGACTGGAAGCTACAGCACGATCGTCACAGTTTAGAATAA CGAGAGTTCTTGATGACATGGTGTAAACTGGAACTTTTGTGGTGAGATAAGGCCAAAGAT GACTTCAGATAAGCCATTGAGTGGGTTCCCTTAAGCATACATGAGGAGAAATATATATGA AAATGCCACATATTTATTTTGCTTACGCTAAGAAGTATGTGATTTATTACACAAGCCAAT GAGAATTCCCGTTTCTTCAGCAATAAGACAAAGAACAACTTGGTTAAACCCTGAAACCCA AAAATCGTTCCTTGTGTGTGTNTGAAGTAGACAGGAGTTTATGATTTATTACAACACTAA CAAGGCGTGTATATGCAACGTTGAGCTAGTCTACAGTCCTCTATATGCTCGATTTTTGTT GTCGATGAAGTTGAAGACGCTTTTGCTTGGTGTGTGTATTCGTATGATTGTTTACAATTT TACTGAGATGTCTAGGCAATGAACCTTAGCGTTCGCATCATACGAAAACATACTAAGCTC AATAGACATGTTAGGGTTTGCGGCATAATTGATAGCTAATCAAATCATGATTGCTACAAA C



consensusID : consensus_10182#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 570
fasta sequence
                              [AATTTGATTTCCACCTGTTCCTGTTTCAACTGTAATTGATGCAACTCCAGTACTATTCATTGATGA-TCTTGATATACCGTCTAAGTTTAAATCAGAATATTGTCAATTAATATACTAGTACACAATATGACAATGAAATCGACAAAAGAACTAAATTACTATTTGTACGGGAGTGATTAGGACTGGAACTAGTAAGAAATGTCTTGATAAAGGCGAGTAAGAGCAACTAGGATGGGTTGTCGAATTAGGCGTGTTACAAAAAATCCTAATTACTTCTCGAAATAGTTTGAAAAGATTAACTACGCGTGCTTAGTGAATAATGACAGGATATAAATTGTTTCGATAGTGTTGGCTGTTTTTTTTACACTTGTGGGGTGTAGGAAATGGGAATTAATTGCATGTAAATATTGTTAGATCATTGACGTTTCTCTCAAATTTCACTTACCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTGCATCCCAGTACTCTGGAAGCACACACTGATTTGCTCCTT]

[+] EMBL CD189719             [AATTTGATTTCCACCTGTTCCTGTTTCAACTGTAATTGATGCAACTCCAGTACTATTCATTGATGA TCTTGATATACCGTCTAAGTTTAAATCAGAATATTGTCAATTAATATACTAGTACACAATATGACAATGAAATCGACAAAAGAACTAAATTACTATTTGTACGGGAGTGATTAGGACTGGAACTAGTAAGAAATGTCTTGATAAAGGCGAGTAAGAGCAACTAGGATGGGTTGTCGAATTAGGCGTGTTACAAAAAATCCTAATTACTTCTCGAAATAGTTTGAAAAGATTAACTACGCGTGCTTAGTGAATAATGACAGGATATAAATTGTTTCGATAGTGTTGGCTGTTTTTTTTACACTTGTGGGGTGTAGGAAATGGGAATTAATTGCATGTAAATATTGTTAGATCATTGACGTTTCTCTCAAATTTCACTTACCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTGCATCCCAGTACTCTGGAAGCACACACTGATTTGCTCCTT]
[-] EMBL CD195129             [                                 AAATGATGCAACTCCAGTACTATTCATTGATGA TCTTGATATACCGTCTAAGTTTAAATCAGAATATTGTCAATTAATATACTAGTACACAATATGACAATGAAATCGACAAAAGAACTAAATTACTATTTGTACGGGAGTGATTAGGACTGGAACTAGTAAGAAATGTCTTGATAAAGGCGAGTAAGAGCAACTAGGATGGGTTGTCGAATTAGGCGTGTTACAAAAAATCCTAATTACTTCTCGAAATAGTTTGAAAAGATTAACTACGCGTGCTTAGTGAATAATGACAGGATATAAATTGTTTCGATAGTGTTGGCTGTTTTTTTTACACTTGTGGGGTGTAGGAAATGGGAATTAATTGCATGTAAATATTGTTAGATCATTGACGTTTCTCTCAAATTTCACTTACCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTG                                       ]
[-] EMBL CD195113             [                                      ATGCAACTCCAGTACTATTCA TGATGATTCTTGATATACCGTCTAAGTTTAAATCAGAATATTGTCAATTAATATACTAGTACACAATATGACAATGAAATCGACAAAAGAACTAAATTACTATTTGTACGGGAGTGATTAGGACTGGAACTAGTAAGAAATGTCTTGATAAAGGCGAGTAAGAGCAACTAGGATGGGTTGTCGAATTAGGCGTGTTACAAAAAATCCTAATTACTTCTCGAAATAGTTTGAAAAGATTAACTACGCGTGCTTAGTGAATAATGACAGGATATAAATTGTTTCGATAGTGTTGGCTGTTTTTTTTACACTTGTGGGGTGTAGGAAATGGGAATTAATTGCATGTAAATATTGTTAGATCATTGACGTTTCTCTCAAATTTCACTTACCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTG                                       ]


>consensus_10182#2 AATTTGATTTCCACCTGTTCCTGTTTCAACTGTAATTGATGCAACTCCAGTACTATTCAT TGATGATCTTGATATACCGTCTAAGTTTAAATCAGAATATTGTCAATTAATATACTAGTA CACAATATGACAATGAAATCGACAAAAGAACTAAATTACTATTTGTACGGGAGTGATTAG GACTGGAACTAGTAAGAAATGTCTTGATAAAGGCGAGTAAGAGCAACTAGGATGGGTTGT CGAATTAGGCGTGTTACAAAAAATCCTAATTACTTCTCGAAATAGTTTGAAAAGATTAAC TACGCGTGCTTAGTGAATAATGACAGGATATAAATTGTTTCGATAGTGTTGGCTGTTTTT TTTACACTTGTGGGGTGTAGGAAATGGGAATTAATTGCATGTAAATATTGTTAGATCATT GACGTTTCTCTCAAATTTCACTTACCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATA AACATCTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTGCATCCCAGT ACTCTGGAAGCACACACTGATTTGCTCCTT



consensusID : consensus_10182#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 340
fasta sequence
                              [ATGGTGTAAACTGGAACTTTTGTGGTGAGATAAGGCCAAAGATGACTTCAGATAAGCCATTGAGTGGGTTCCTTCAAACTGGCAAACTATTACTTTTGTATCCAAGAGGGTTAGTTTCTCTGCAAAGGAAATGTCTTTTTCTGATACAAGCATATTTGCACCTGGGACGATGATAATTTGATTTCCACCTGTTCCTGTTTCAACTGTAATTGATGCAACTCCAGTACTATTCATTGATGATCTTGATATACCGTCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTG]

[-] EMBL CD195351             [ATGGTGTAAACTGGAACTTTTGTGGTGAGATAAGGCCAAAGATGACTTCAGATAAGCCATTGAGTGGGTTCCTTCAAACTGGCAAACTATTACTTTTGTATCCAAGAGGGTTAGTTTCTCTGCAAAGGAAATGTCTTTTTCTGATACAAGCATATTTGCACCTGGGACGATGATAATTTGATTTCCACCTGTTCCTGTTTCAACTGTAATTGATGCAACTCCAGTACTATTCATTGATGATCTTGATATACCGTCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTG]
[-] EMBL CD194917             [ATGGTGTAAACTGGAACTTTTGTGGTGAGATAAGGCCAAAGATGACTTCAGATAAGCCATTGAGTGGGTTCCTTCAAACTGGCAAACTATTACTTTTGTATCCAAGAGGGTTAGTTTCTCTGCAAAGGAAATGTCTTTTTCTGATACAAGCATATTTGCACCTGGGACGATGATAATTTGATTTCCACCTGTTCCTGTTTCAACTGTAATTGATGCAACTCCAGTACTATTCATTGATGATCTTGATATACCGTCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTG]
[-] EMBL CD194979             [                                                                    TTCCTTCAAACTGGCAAACTATTACTTTTGTATCCAAGAGGGTTAGTTTCTCTGCAAAGGAAATGTCTTTTTCTGATACAAGCATATTTGCACCTGGGACGATGATAATTTGATTTCCACCTGTTCCTGTTTCAACTGTAATTGATGCAACTCCAGTACTATTCATTGATGATCTTGATATACCGTCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTG]


>consensus_10182#3 ATGGTGTAAACTGGAACTTTTGTGGTGAGATAAGGCCAAAGATGACTTCAGATAAGCCAT TGAGTGGGTTCCTTCAAACTGGCAAACTATTACTTTTGTATCCAAGAGGGTTAGTTTCTC TGCAAAGGAAATGTCTTTTTCTGATACAAGCATATTTGCACCTGGGACGATGATAATTTG ATTTCCACCTGTTCCTGTTTCAACTGTAATTGATGCAACTCCAGTACTATTCATTGATGA TCTTGATATACCGTCAGTGCTCACCCCAAGTTGTTTCAAGTGCTGAATAAACATCTCACC AAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTGTTG



consensusID : consensus_10182#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 239
fasta sequence
                              [AGGGCCAAGATTCGGCACGAGGGACCTTGAGACAACCCACCTGCTTATAGGGTCTCTAAATCAGAAATTCGCTATTATGAAAAAATCGCACGTCACAGTTGTTGGCTCACTCAACGTTGACCTATCCATATTCACAAATATCATTCCAAAGGTAGGAGAGACAGTAACTGGTTCGAATTTTCTTCTTGGTTACGGGGGTAAAGGAGCAAATCAGTGTGTGGCTTCCAGAGTACTGGGAT]

[+] EMBL CD078025             [AGGGCCAAGATTCGGCACGAGGGACCTTGAGACAACCCACCTGCTTATAGGGTCTCTAAATCAGAAATTCGCTATTATGAAAAAATCGCACGTCACAGTTGTTGGCTCACTCAACGTTGACCTATCCATATTCACAAATATCATTCCAAAGGTAGGAGAGACAGTAACTGGTTCGAATTTTCTTCTTGGTTACGGGGGTAAAGGAGCAAATCAGTGTGTGGCTTCCAGAGTACTGGGAT]


>consensus_10182#4 AGGGCCAAGATTCGGCACGAGGGACCTTGAGACAACCCACCTGCTTATAGGGTCTCTAAA TCAGAAATTCGCTATTATGAAAAAATCGCACGTCACAGTTGTTGGCTCACTCAACGTTGA CCTATCCATATTCACAAATATCATTCCAAAGGTAGGAGAGACAGTAACTGGTTCGAATTT TCTTCTTGGTTACGGGGGTAAAGGAGCAAATCAGTGTGTGGCTTCCAGAGTACTGGGAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10182#0      TAATATTTATTTCAATGCAAATTACCTTTTACATTTATTTAATGAAGTTGGGATATAGGA 60
consensus_10182#3      ------------------------------------------------------------
consensus_10182#2      ------------------------------------------------------------
consensus_10182#1      ------------------------------------------------------------
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      AATACCAAAAAAAGAGTAAAAAATATTGGAAAAATATAACTGATTTTAGCCACTATGGCC 120
consensus_10182#3      ------------------------------------------------------------
consensus_10182#2      ------------------------------------------------------------
consensus_10182#1      ------------------------------------------------------------
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      ACTGAAATGTTTCTGATGCAAAGAGTGTATCAGGAAGTTCATCACGTTTCAGGTAACTAG 180
consensus_10182#3      ------------------------------------------------------------
consensus_10182#2      ------------------------------------------------------------
consensus_10182#1      ------------------------------------------------------------
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      ATTGTGTCCCTTTTTTACGGATTGATTGGCTGGCAACCCAAACCGATCGTCTTATTTGTT 240
consensus_10182#3      ------------------------------------------------------------
consensus_10182#2      ------------------------------------------------------------
consensus_10182#1      ------------------------------------------------------------
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      CAGCCAGAGTAATGTCCTCGTGACACGCGACAAAGTAAGCTAGTGAGCCAACAAAACAGT 300
consensus_10182#3      ------------------------------------------------------------
consensus_10182#2      ------------------------------------------------------------
consensus_10182#1      ------------------------------------------------------------
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      CTCCTGCTCCTGTTGTGTCAACAACATCAAAGTTACTGGGTGCTGAGAAGTGTACTACCA 360
consensus_10182#3      ------------------------------------------------------------
consensus_10182#2      ------------------------------------------------------------
consensus_10182#1      ------------------------------------------------------------
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      ACTTCTCTTGGTTTTCAAAAGTAATACGAGCCACTTCGCTAGCGTCTTTGGCATATATAT 420
consensus_10182#3      ------------------------------------------------------------
consensus_10182#2      ------------------------------------------------------------
consensus_10182#1      ------------------------------------------------------------
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      TTGCCATATCTTGTTCAGATAAAATTGCAATAACTCCTTTACTCCCTAGAGTTACTATGG 480
consensus_10182#3      ------------------------------------------------------------
consensus_10182#2      ------------------------------------------------------------
consensus_10182#1      ------------------------------------------------------------
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      GGCATTTGATTTTCTTTTCAAGTAAGTAGGCAAGACCAGGAATAAAAGCATCTATATTCA 540
consensus_10182#3      ------------------------------------------------------------
consensus_10182#2      -----------------------------------------------------AATTTGA 7
consensus_10182#1      -------------------TTTCACTCTCATAATAAATACGACTGGAAGCTACAGCACGA 41
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      GTGAGCCAATCTCATTTTTGGAAAAAAAGTGATC-CAGAGTCAGACTCGGTTATGGAACA 599
consensus_10182#3      ------------------------------------------------------------
consensus_10182#2      TTTCCACCTGTTCCTGTTTCAACTGTAATTGATG-CAACTCCAGTACTATTCATTGATGA 66
consensus_10182#1      TCGTCACAGTTTAGAATAACGAGAGTTCTTGATGACATGGTGTAAACTGGAACTTTTGTG 101
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      AAATTCGGACTCATTTGGACACACAAAATCACAATTTGGTAAAATATCTTCCATTAATTC 659
consensus_10182#3      ------------------------------------------------------------
consensus_10182#2      TCTTGATATACCGTCTAAGTTTAAATCAGAATATTGTCAATTAATATACTAGTACACAAT 126
consensus_10182#1      GTGAGATAAGGCCAAAGATGACTTCAGATAAGCCATTGAGTGGGTTCCCTTAAGCATACA 161
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      GTAATTCCCCAAAATCTCAGGATTTCCAGAAGCCACTGGCGCAGGTGCGG---GATTTAA 716
consensus_10182#3      -------------------------------------------ATGGTGT---AAACTGG 14
consensus_10182#2      ATGACAATGAAATCGACAAAAGAACTAAATTACTATTTGTACGGGAGTGATTAGGACTGG 186
consensus_10182#1      TGAGGAGAAATATATATGAAAATGCCACATATTTATTTTGCTTACGCTAAGAAGTATGTG 221
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      AATTGTCT-----TTGCACCTTTGGCACGACCAAGC-CTCAAACTATAGAGTGTTGC--- 767
consensus_10182#3      AACTTTTG-----TGGTGAGATAAGGCCAAAGATGA-CTTCAG--ATAAGCCATTG---- 62
consensus_10182#2      AACTAGTAAGAAATGTCTTGATAAAGGCGAGTAAGAGCAACTAGGATGGGTTGTCG---- 242
consensus_10182#1      ATTTATTAC---ACAAGCCAATGAGAATTCCCGTTT-CTTCAGCAATAAGACAAAGAACA 277
consensus_10182#4      ------------------------------------------------------------
                                                                                   

consensus_10182#0      AGATGGATTGATTTCAAACTGGCA-AACTATTACTTTTGT--ATCCAAGAGGGTTAGTTT 824
consensus_10182#3      -AGTGGGTTC-CTTCAAACTGGCA-AACTATTACTTTTGT--ATCCAAGAGGGTTAGTTT 117
consensus_10182#2      AATTAGGCGTGTTACAAAAAATCCTAATTACTTCTCGAAATAGTTTGAAAAGATTAACTA 302
consensus_10182#1      ACTTGGTTAAACCCTGAAACCCAAAAATCGTTCCTTGTGTGTGTNTGAAGTAGACAGGAG 337
consensus_10182#4      -------------------------------------------------AGGGCCAAGAT 11
                                                                              *    

consensus_10182#0      CTC-TGCAAAGGAAATGTCTTTTTCTGATACAAGCATATTTGCACCTGGGACGATGATAA 883
consensus_10182#3      CTC-TGCAAAGGAAATGTCTTTTTCTGATACAAGCATATTTGCACCTGGGACGATGATAA 176
consensus_10182#2      CGCGTGCTTAGTGAATAA-------TGACAGGATATAAATTGTTTCGATAGTGTTGGCTG 355
consensus_10182#1      TTTATGATTTATTACAACACTAACAAGGCGTGTATATG-CAACGTTGAGCTAGTCTACAG 396
consensus_10182#4      TCGGCACGAGGGACCTTGAGACAACCCACCTGCTTATA-GGGTCTCTAAATCAGAAATTC 70
                                                                                   

consensus_10182#0      TTTGATTTCCACCTGTTCC-TGTTTCAACTGT-AATTGATGCAACTCCAGTACTATT--- 938
consensus_10182#3      TTTGATTTCCACCTGTTCC-TGTTTCAACTGT-AATTGATGCAACTCCAGTACTATT--- 231
consensus_10182#2      TTTTTTTTACACTTGTGGGGTGTAGGAAATGGGAATTAATTGCATGTAAATATTGTTAGA 415
consensus_10182#1      TCCTCTATATGCTCGATTTTTGTTGTCGATGA-AGTTGAAGACGCTTTTGCTTGGTGTGT 455
consensus_10182#4      GCTATTATGAAAAAATCGCACGTCACAGTTGTTGGCTCACTCAACGTTGAC-CTATCCAT 129
                            * *             **      **     * *                *    

consensus_10182#0      -CATTG--ATGATCTTGATATACC------GTCAGTGCTCACCCCAAGTTGT----TTCA 985
consensus_10182#3      -CATTG--ATGATCTTGATATACC------GTCAGTGCTCACCCCAAGTTGT----TTCA 278
consensus_10182#2      TCATTG--ACGTTTCTCTCAAATTTCACTTACCAGTGCTCACCCCAAGTTGT----TTCA 469
consensus_10182#1      GTATTCGTATGATTGTTTACAATTTTACTGAGATGTCTAGGCAATGAACCTTAGCGTTCG 515
consensus_10182#4      ATTCACAAATATCATTCCAAAGGTAGGAGAGACAGTAACTGGTTCGAATTTT--CTTCTT 187
                               *      *                  **          *    *    *   

consensus_10182#0      AGTGCTGAATAAACAT-CTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTG 1044
consensus_10182#3      AGTGCTGAATAAACAT-CTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTG 337
consensus_10182#2      AGTGCTGAATAAACAT-CTCACCAAAATAGTCATCGCCAACTTTTCCTACCAGTGCAGTG 528
consensus_10182#1      CATCATACGAAAACATACTAAGCTCAATAGACAT-GTTAGGGTTTGCGGCATAATTGATA 574
consensus_10182#4      GGTTACGGGGGTAAAG---GAGCAAATCAGT----GTGTGGCTTCCAGAGTACTGGGAT- 239
                         *         * *     * *  *  **     *      **              * 

consensus_10182#0      TTG--------------------------------------- 1047
consensus_10182#3      TTG--------------------------------------- 340
consensus_10182#2      TTGCATCCCAGTACTCTGGAAGCACACACTGATTTGCTCCTT 570
consensus_10182#1      GCTAATCAAATCATGATTGCTACAAAC--------------- 601
consensus_10182#4      ------------------------------------------
                                                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)