cluster # 10188

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Schistosoma mansoni
cluster # 10188 cluster # 10188 Sequences # 14 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10188#0 length = 807 sequences # 7
consensus_10188#1 length = 760 sequences # 3

consensus_10188#2 length = 603 sequences # 2
consensus_10188#3 length = 511 sequences # 1
consensus_10188#4 length = 505 sequences # 1

consensusID : consensus_10188#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 807
fasta sequence

                              [AGACGATTTTGATAGACTACGTCTGATATGAATACTGGTAATCATGTACTGTTTCTAAACCCGCAAGAAGAGAACGTAGCTGTTGTTCTAAACTAGAGGCCATGCTTAAATTGAGAGTGGAATAACGACCAGGATGGTCTTTTGGAAGCGGTGGGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACAGTTCTTGATTATCAACGATTTCAGTCAAAAGGATGTTTACGAGATGTGAATTATGAATCACAACTGGTATCTCTTCTAGAACACGAGTAAAACTGCTGCGACCTACACTGCTTGCCGCTTCACATTCCCATGGGACCTCGGGACCCTTGTGGCCCATCAGACGAAGACGATCTTCAGCCTCGGATCTTGCAGCGAGAACATCATCAGACAGACGATACGCTTTCAGACCAATTTGACCTCTGCTAGTTCTTGTTGGGTCATAAGTCAGCAACACAGATTCAGGGAGATTAATTTGACGTTGATAAATGTTTTCAATATTAGCACGGTTAATAGAGACGCCCCCAGGACCAGCTTGATAAAATCCTACATTGAGGTAATCTGTTTGTAGTTGTCTTAAATTACGTATCATATTAGCTTCATAAGTGACCAAAGCCTCGTTGGCATTTGGATCATCTTCTTGAGTCTTAGGTAATGGGAAGCAATTAGTGATTTCAAGTTGACTGCCTTGTGCAAGCCCTAACAATACACCATTGACAAAATTTTGGCTAGATACAGATTCTTCTTCATAGTGCTTAATCATTTTTAAGAACACCTTTCC-TTCGAACT]

[+] EMBL CD069562             [AGACGATTTTGATAGACTACGTCTGATATGAATACTGGTAATCATGTACTGTTTCTAAACCCGCAAGAAGAGAACGTAGCTGTTGTTCTAAACTAGAGGCCATGCTTAAATTGAGAGTGGAATAACGACCAGGATGGTCTTTTGGAAGCGGTGGGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACAGTTCTTGATTATCAACGATTTCAGTCAAAAGGATGTTTACGAGATGTGAATTATGAATCACAACTGGTATCTCTTCTAGAACACGAGTAAAACTGCTGCGACCTACACTGCTTGCCGCTTCACATTCCCATGGGACCTCGGGACCCTTGTGGCCCATCAGACGAAGACGATCTTCAGCCTCGGATCTTGCAGCGAGAACATCATCAGACAGACGATACGCTTTCAGACCAATTTGACCTCTGCTAGTTCTTGTTGGGTCATAAGTCAGCAACACAGATTCAGGGAGATTAA                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD147662             [                                                                                                                                                         aGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACAGTTCTTGATTATCAACGATTTCAGTCAAAAGGATGTTTACGAGATGTGAATTATGAATCACAACTGGTATCTCTTCTAGAACACGAGTAAAACTGCTGCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD159916             [                                                                                                                                                                                                                                                                                                                                                                                                   TTGCAGCGAGAACATCATCAGACAGACGATACGCTTTCAGACCAATTTGACCTCTGCTAGTTCTTGTTGGGTCATAAGTCAGCAACACAGATTCAGGGAGATTAATTTGACGTTGATAAATGTTTTCAATATTAGCACGGTTAATAGAGACGCCCCCAGGACCAGCTTGATAAAATCCTACATTGAGGTAATCTGTTTGTAGTTGTCTTAAATTACGTATCATATTAGCTTCATAAGTGACCAAAGCCTCGTTGGCATTTGGATCATCTTCTTGAGTCTTAGGTAATGGGAAGCAATTAGTGATCTCAAGTTGACTGCCTTGTGCAAGCCCTAACAATACACCATTGACAAAATTTTGGCTAGATACAGATTCTTCTTCATAGTGCTTCATCATTTTTAAGAACAGCTTTCC TTCGAACT]
[+] EMBL CD159907             [                                                                                                                                                                                                                                                                                                                                                                                                   TTGCAGCGAGAACATCATCAGACAGACGGTACGCTTTCAGACCAATTTGACCTCTGCTAGTTCTTGTTGGGTCATAAGTCAGCAACACAGATTCAGGGAGATTAATTTGACGTTGATAAATGTTTTCAATATTAGCACGGTTATTAGAGACGCCCCCAGGACCAGCTTGATAAAATCCTACATTGAGGTAATCTGTTTGTAGTTGTCTTAAATTACGTATCATATTAGCTTCATAAGTGACCAAAGCCTCGTTGGCATTTGGATCATCTTCTTGAGTCTTAGGTAATGGGAAGCAATTAGTGATTTCAAGTTGACTGCCTTGTGCAAGCCCTAACAATACACCATTGACAAAATTTTGGCTAGATACAGATTCTTCTTCATAGTGCTTAATCATTTTTAAGAACAACTTTCC TTTGAACT]
[+] EMBL CD159951             [                                                                                                                                                                                                                                                                                                                                                                                                   TTGCAGCGAGAACATCATCAGACAGACGATACGCTTTCAGACCAATTTGACCTCTGCTAGTTCCTGTTGGGTCATAAGTCAGCAACACAGATTCAGGGAGATTAATTTGACGTTGATAAATGTTTTCAATATTAGCACGGTTAATAGAGACGCCCCCAGGACCAGCTTGATAAAATCCTACATTGAGGTAATCTGTTTGTAGTTGTCTTAAATTACGTATCATATTAGCTTCATAAGTGACCAAAGCCTCGTTGGCATTTGGATCATCTTCTTGAGTCTTAGGTAATGGGAAGCAATTAGTGATTTCAAGTTGACTGCCTTGTGCAAGCCCTAACAATACACCATTGACAAAATTTTGGCTAGATACAGATTCTTCTTCATAGTGCTTAATCATTTTTAAGAACACCTNTCCTTTCGAct ]
[+] EMBL CD159815             [                                                                                                                                                                                                                                                                                                                                                                                                   TTGCAGCGAGAACATCATCAGACAGACGATACGCTTTCAGACCAATTTGACCTCTGCTAGTTCTTGTTGGGTCATAAGTCAGCAACACAGATTCAGGGAGATTAATTTGACGTTGATAAATGTTTTCAATATTAGCACGGTTAATAGAGACGCCCCCAGGACCAGCTTGATAAAATCCTACATTGAGGTAATCTGTTTGTAGTTGTCTTAAATTACGTATCATATTAGCTTCATAAGTGACCAAAGCCTCGTTGGCATTTGGATCATCTTCTTGAGTCTTAGGTAATGGGAAGCAATTAGTGATTTCAAGTTGACTGCCTTGTGCAAGCCCTAACAATACACCATTGACAAAATTTTGGCTAGATACAGATTCTTCTTCATAGTGCTTAATCATTTTTAAGAACACCTTTCC TTCGAACT]
[-] EMBL CD181880             [                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTCTTGNTGGGTCATAAGTCAGCAACACAGATTCAGGGAGATTAATTTGACGCTGATAAATGTTTTCAATATTAGCACGGTTAATAGAGACGCCCCCAGGACCAGCTTGATAAAATCCTACATTGAGGTAATCTGTTTGTAGTTGTCTTAAATTACGTATCATATTAGCTTCATAAGTGACCAAAGCCTCGTTGGCATTTGGATCATCTTCTTGAGTCTTAGGTAATGGGAAGCAATTAGTGATTTCAAGTTGACTGCCTTGTGCAAGCCCTAACAATACACCATTGACAAAATTTTGtcagtggg                                                       ]




>consensus_10188#0
AGACGATTTTGATAGACTACGTCTGATATGAATACTGGTAATCATGTACTGTTTCTAAAC
CCGCAAGAAGAGAACGTAGCTGTTGTTCTAAACTAGAGGCCATGCTTAAATTGAGAGTGG
AATAACGACCAGGATGGTCTTTTGGAAGCGGTGGGGCCAGATCTAGCATTGATGAATTTG
TAGAAAGCTCCGATCGCGACAGTTCTTGATTATCAACGATTTCAGTCAAAAGGATGTTTA
CGAGATGTGAATTATGAATCACAACTGGTATCTCTTCTAGAACACGAGTAAAACTGCTGC
GACCTACACTGCTTGCCGCTTCACATTCCCATGGGACCTCGGGACCCTTGTGGCCCATCA
GACGAAGACGATCTTCAGCCTCGGATCTTGCAGCGAGAACATCATCAGACAGACGATACG
CTTTCAGACCAATTTGACCTCTGCTAGTTCTTGTTGGGTCATAAGTCAGCAACACAGATT
CAGGGAGATTAATTTGACGTTGATAAATGTTTTCAATATTAGCACGGTTAATAGAGACGC
CCCCAGGACCAGCTTGATAAAATCCTACATTGAGGTAATCTGTTTGTAGTTGTCTTAAAT
TACGTATCATATTAGCTTCATAAGTGACCAAAGCCTCGTTGGCATTTGGATCATCTTCTT
GAGTCTTAGGTAATGGGAAGCAATTAGTGATTTCAAGTTGACTGCCTTGTGCAAGCCCTA
ACAATACACCATTGACAAAATTTTGGCTAGATACAGATTCTTCTTCATAGTGCTTAATCA
TTTTTAAGAACACCTTTCCTTCGAACT

consensusID : consensus_10188#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 760
fasta sequence

                              [ATGAAAATAAGGCTTTTTATTACTNTGTGAGTAAAGAGAGAACAATGAGGAGCTCTTCTAAAGAGATACTCGTGTTACCGTTATTGACTATTTGGAAACGAACTCATAAAACTATCAATGAGAAGAATAGAAAGGCTTTTAACCAAGATCAAATGAGAAATAACTATACAGATGAAAACAAATATCAACATAACACCACTTTGTTTATTATGTTATACAAGTTATTTAGATCTGTGTATCGTTTAAATTTTTTGAGATTTAGGAGCTCCGGATGAACTTGTTTTTTGTACAGCTTGTGTTAACATTAATTTACCAATTGTTTGACCTGCCATCTGAGCAAGACTGTTGCAGTAGAAATCAAGCTGAGCTGAAACCAACGCAGTATCCAAACGTATTGGAGCCAACTCCCGATTACGTGTTTCTGTTGCGGTCTTGCCAGCTACCGTAGTTTGAGATTTTGATAGACTACGTTGATATGAATACTGGTAATCATGTACTGTTTCTAAACCCGCAAGAAGAGAACGTAGCTGTTGTTCTAAACTAGAGGCCATGCTTAAATTGAGAGTGGAATAACGACCAGGATGGTCTTTTGGAAGCGGTGGGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACAGTTCTTGATTATCAACGATTTCAGTCAAAAGGATGTTTACGAGATGTGAATTATGAATCACAACTGG-ATCTCTTATAGAACACGAGTAAAACCCGCGTGCCGAATTAATGG]

[-] EMBL CD081725             [ATGAAAATAAGGCTTTTTATTACTNTGTGAGTAAAGAGAGAACAATGAGGAGCTCTTCTAAAGAGATACTCGTGTTACCGTTATTGACTATTTGGAAACGAACTCATAAAACTATCAATGAGAAGAATAGAAAGGCTTTTAACCAAGATCAAATGAGAAATAACTATACAGATGAAAACAAATATCAACATAACACCACTTTGTTTATTATGTTATACAAGTTATTTAGATCTGTGTATCGTTTAAATTTTTTGAGATTTAGGAGCTCCGGATGAACTTGTTTTTTGTACAGCTTGTGTTAACATTAATTTACCAATTGTTTGACCTGCCATCTGAGCAAGACTGTTGCAGTAGAAATCAAGCTGAGCTGAAACCAACGCAGTATCCAAACGTATTGGAGCCAACTCCCGATTACGTGTTTCTGTTGCGGTCTTGCCAGCTACCGTAGTTTGAGATTTTGATAGACTACGTTGATATGAATACTGGTAATCATGTACTGTTTCTAAACCCGCAAGAAGAGAACGTAGCTGTTGTTCTAAACTAGAGGCCATGCTTAAATTGAGAGTGGAATAACGACCAGGATGGTCTTTTGGAAGCGGTGGGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACAGTTCTTGATTATCAACGATTTCAGTCAAAAGGATGTTTACGAGATGTGAATTATGAATCACAACTGG ATCTCTTATAGAACACGAGTAAAACCCGCGTGCCGAATTAATGG]
[+] EMBL CD074238             [                                                                                                                                                                                                   CCACTTTGTTTATTATGTTATACAAGTTATTTAAATCTGGGTTTCGTTTAAATTTTTTGAAATTTAGGAGCTCCGGATGAACTTGTTTTTTGTACAGCTTGGGTTAACATTAATTTACCAATTGTTTGACCTGCCATTTGAGCAAAACTGTTGCAGTAAAAATCAAGCTGAGCTGAAACCAACGCAGTATCCAAACGTTTTGGAGCCAACTCCCGATTACGTGTTTTTGTTGCGGTCTTGCCAGCTACCGTAGTTTGAAATTTTGATAAACTACGTTGATATGAATACTGGTAATCATGTACTGTTT                                                                                                                                                                                                                                                                   ]
[+] EMBL CD198532             [                                                                                                                                                                                                                                                                                           TTTGTACAGCTTGTGTTAACATTAATTTACCAATTGTTTGACCTGCCATCTGAGCAAGACTGTTGCAGTAGAAATCAAGCTGAGCTGAAACCAACGCAGTATCCAAACGTATTGGAGCCAACTCCCGATTACGTGTTTCTGTTGCGGTCCTGCCAGCTACCGTAGTTTGAGATTTTGATAGACTACGTTGATATGAATACTGGTAATCATGTACTGTTTCTAAACCCGCAAGAAGAGAACGTAGCTGTTGTTCTAAACTAGAGGCCATGCTTAAATTGAGAGTGGAATAACGACCAGGATGGTCTTTTGGAAGCGGTGGGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACAGTTCTTGATTATCAACGATTTCAGTCAAAAGGATGTCTACGAGATGTGAATTATGAATCACAACTGGTATCTCTT                                     ]




>consensus_10188#1
ATGAAAATAAGGCTTTTTATTACTNTGTGAGTAAAGAGAGAACAATGAGGAGCTCTTCTA
AAGAGATACTCGTGTTACCGTTATTGACTATTTGGAAACGAACTCATAAAACTATCAATG
AGAAGAATAGAAAGGCTTTTAACCAAGATCAAATGAGAAATAACTATACAGATGAAAACA
AATATCAACATAACACCACTTTGTTTATTATGTTATACAAGTTATTTAGATCTGTGTATC
GTTTAAATTTTTTGAGATTTAGGAGCTCCGGATGAACTTGTTTTTTGTACAGCTTGTGTT
AACATTAATTTACCAATTGTTTGACCTGCCATCTGAGCAAGACTGTTGCAGTAGAAATCA
AGCTGAGCTGAAACCAACGCAGTATCCAAACGTATTGGAGCCAACTCCCGATTACGTGTT
TCTGTTGCGGTCTTGCCAGCTACCGTAGTTTGAGATTTTGATAGACTACGTTGATATGAA
TACTGGTAATCATGTACTGTTTCTAAACCCGCAAGAAGAGAACGTAGCTGTTGTTCTAAA
CTAGAGGCCATGCTTAAATTGAGAGTGGAATAACGACCAGGATGGTCTTTTGGAAGCGGT
GGGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACAGTTCTTGATTA
TCAACGATTTCAGTCAAAAGGATGTTTACGAGATGTGAATTATGAATCACAACTGGATCT
CTTATAGAACACGAGTAAAACCCGCGTGCCGAATTAATGG

consensusID : consensus_10188#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 603
fasta sequence

                              [AAATCAAGCTGAGCTGAAACCAACGCAGTATCCAAACGTATTGGAGCCAACTCCCGATTACGTGTTTCTGTTGCGGTCTTGCCAGCTACCGTAGTTTGAGATTTTGATAGACTACGTTGATATGAATACTGGTAATCATGTACTGTTTCTAAACCCGCAAGAAGAGAACGTAGCTGTTGTTCTAAACTAGAGGCCATGCTTAAATTGAGAGTGGAATAACGACCAGGATGGTCTTTTGGAAGCGGTGGGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACAGTTCTTGATTATCAAAGATTTCAGTCAAAAGGATGTTTACGAGATGTGAATTATGAATCACAACTGGTATCTCTTCTAGAACACGAGTAAAACTGCTGCGACCTACACTGCTTGCCGCTTCACATTCCCATGGGACCTCGGGACCCTTGTGGCCCATCAGACGAAAACGATCTTCAGCCTCGGATCTTGCAGCGAGAACATCATCAGACAGACGATACGCTTTCAGACCAATTTGACCTCTGCTAGTTCTTGTTGGGTCATAAGGTCAGCAACACAGATTCAGGCCTCGTGCCGAATNTTGGCCTNGA]

[-] EMBL CD080319             [AAATCAAGCTGAGCTGAAACCAACGCAGTATCCAAACGTATTGGAGCCAACTCCCGATTACGTGTTTCTGTTGCGGTCTTGCCAGCTACCGTAGTTTGAGATTTTGATAGACTACGTTGATATGAATACTGGTAATCATGTACTGTTTCTAAACCCGCAAGAAGAGAACGTAGCTGTTGTTCTAAACTAGAGGCCATGCTTAAATTGAGAGTGGAATAACGACCAGGATGGTCTTTTGGAAGCGGTGGGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACAGTTCTTGATTATCAAAGATTTCAGTCAAAAGGATGTTTACGAGATGTGAATTATGAATCACAACTGGTATCTCTTCTAGAACACGAGTAAAACTGCTGCGACCTACACTGCTTGCCGCTTCACATTCCCATGGGACCTCGGGACCCTTGTGGCCCATCAGACGAAAACGATCTTCAGCCTCGGATCTTGCAGCGAGAACATCATCAGACAGACGATACGCTTTCAGACCAATTTGACCTCTGCTAGTTCTTGTTGGGTCATAAGGTCAGCAACACAGATTCAGGCCTCGTGCCGAATNTTGGCCTNGA]
[+] EMBL CD074239             [                                                                                                                                                                                    TCTAAACTAAAGGCCATGCTTAAATTGAGAGGGGAATAACGACCAGGATGGTCTTTTGGAAGCGGGGGGGCCAAATCTAGCATTGATGAATTTGTAAAAAGCTCCGATCGCGACAGTTTTTGATTATCAAAGATTTCAGTCAAA                                                                                                                                                                                                                                                                                       ]




>consensus_10188#2
AAATCAAGCTGAGCTGAAACCAACGCAGTATCCAAACGTATTGGAGCCAACTCCCGATTA
CGTGTTTCTGTTGCGGTCTTGCCAGCTACCGTAGTTTGAGATTTTGATAGACTACGTTGA
TATGAATACTGGTAATCATGTACTGTTTCTAAACCCGCAAGAAGAGAACGTAGCTGTTGT
TCTAAACTAGAGGCCATGCTTAAATTGAGAGTGGAATAACGACCAGGATGGTCTTTTGGA
AGCGGTGGGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACAGTTCT
TGATTATCAAAGATTTCAGTCAAAAGGATGTTTACGAGATGTGAATTATGAATCACAACT
GGTATCTCTTCTAGAACACGAGTAAAACTGCTGCGACCTACACTGCTTGCCGCTTCACAT
TCCCATGGGACCTCGGGACCCTTGTGGCCCATCAGACGAAAACGATCTTCAGCCTCGGAT
CTTGCAGCGAGAACATCATCAGACAGACGATACGCTTTCAGACCAATTTGACCTCTGCTA
GTTCTTGTTGGGTCATAAGGTCAGCAACACAGATTCAGGCCTCGTGCCGAATNTTGGCCT
NGA

consensusID : consensus_10188#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 511
fasta sequence

                              [TTGCAGTATAAATCAAGCTGAGCTGAGACCAACGCAGTATTCAAACGTATTGGAGCCAACTCCCGATTACGTGTTTCTGTTGCGGTCTTGCCAGCTACCGTGGTTTGAGATTTTGATAGACTACGTTGATATGAATACTGGTAATCATGTACTGATTCTAAACCCGCAAGAATAGAACGTGAATGTTGTTCTAAACTAGAGGCCATGCTTAAATTGAGAGTGGAATATCGACCATGATGGTCTGTTGGAAGCGGGGGGGTCAGATCTAGCATCTATGAATGTGTCGAAAGCTCCGATCGCGACAGAATTTGATAATCAACGATTTGAGTCAATATGATGCTTACTAAATGCTGCGAAAAGAATACCGCTGCAACTTTTATATATGATGAATTATATCTATGATGGAAGATATAGCATGTCAAGTAATTGAGTTAAAATAGTAAATGGGTCGTGATGCGCTACCTTCATTCTTTTGGCTAAAACATGGTGATATGATGTCATCCACCAATTT]

[+] EMBL CD152528             [TTGCAGTATAAATCAAGCTGAGCTGAGACCAACGCAGTATTCAAACGTATTGGAGCCAACTCCCGATTACGTGTTTCTGTTGCGGTCTTGCCAGCTACCGTGGTTTGAGATTTTGATAGACTACGTTGATATGAATACTGGTAATCATGTACTGATTCTAAACCCGCAAGAATAGAACGTGAATGTTGTTCTAAACTAGAGGCCATGCTTAAATTGAGAGTGGAATATCGACCATGATGGTCTGTTGGAAGCGGGGGGGTCAGATCTAGCATCTATGAATGTGTCGAAAGCTCCGATCGCGACAGAATTTGATAATCAACGATTTGAGTCAATATGATGCTTACTAAATGCTGCGAAAAGAATACCGCTGCAACTTTTATATATGATGAATTATATCTATGATGGAAGATATAGCATGTCAAGTAATTGAGTTAAAATAGTAAATGGGTCGTGATGCGCTACCTTCATTCTTTTGGCTAAAACATGGTGATATGATGTCATCCACCAATTT]




>consensus_10188#3
TTGCAGTATAAATCAAGCTGAGCTGAGACCAACGCAGTATTCAAACGTATTGGAGCCAAC
TCCCGATTACGTGTTTCTGTTGCGGTCTTGCCAGCTACCGTGGTTTGAGATTTTGATAGA
CTACGTTGATATGAATACTGGTAATCATGTACTGATTCTAAACCCGCAAGAATAGAACGT
GAATGTTGTTCTAAACTAGAGGCCATGCTTAAATTGAGAGTGGAATATCGACCATGATGG
TCTGTTGGAAGCGGGGGGGTCAGATCTAGCATCTATGAATGTGTCGAAAGCTCCGATCGC
GACAGAATTTGATAATCAACGATTTGAGTCAATATGATGCTTACTAAATGCTGCGAAAAG
AATACCGCTGCAACTTTTATATATGATGAATTATATCTATGATGGAAGATATAGCATGTC
AAGTAATTGAGTTAAAATAGTAAATGGGTCGTGATGCGCTACCTTCATTCTTTTGGCTAA
AACATGGTGATATGATGTCATCCACCAATTT

consensusID : consensus_10188#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 505
fasta sequence

                              [GAAAGCAAAGTGGATGATATACGGTCCATTGGACACAAAAGTAAATATCGGTGATACTTTGCGCCTGTTTTGTATTATACGACGAATGCAAGAACCATTTTTTGTTCACTGGACACATAATGGACAAATATTGAAAAATTCAGCACTAACTAATCAAACAACTGGTATACAAACCTGGGCAAATTATCCTAAGAATGGATTTTATACTTTAGAATTAAAATCTGTATGTGTACAAGACAAAGGATTTTATGGAGTGACTGTATCTAGAGTACTCGATATATCTGGTAAAATGGTAAACGAAACAATANAAGAAGCTGTTTGTTGGGTTGATGTTGAAGGTCAAAAATGCTCGGAAAAGAAAACCGCTCCAGCATTTATAGATGATGAATTTTCTCCGATGATGGAAGTAATAGCATGTCAAGTAGTTGAGTTAAAATGTAAAGTGGTTGGTATCCGGTACCTTCATTCTTTTGGCTAAAAGATGGTGATATGATGTCATCAACCA]

[+] EMBL CD152527             [GAAAGCAAAGTGGATGATATACGGTCCATTGGACACAAAAGTAAATATCGGTGATACTTTGCGCCTGTTTTGTATTATACGACGAATGCAAGAACCATTTTTTGTTCACTGGACACATAATGGACAAATATTGAAAAATTCAGCACTAACTAATCAAACAACTGGTATACAAACCTGGGCAAATTATCCTAAGAATGGATTTTATACTTTAGAATTAAAATCTGTATGTGTACAAGACAAAGGATTTTATGGAGTGACTGTATCTAGAGTACTCGATATATCTGGTAAAATGGTAAACGAAACAATANAAGAAGCTGTTTGTTGGGTTGATGTTGAAGGTCAAAAATGCTCGGAAAAGAAAACCGCTCCAGCATTTATAGATGATGAATTTTCTCCGATGATGGAAGTAATAGCATGTCAAGTAGTTGAGTTAAAATGTAAAGTGGTTGGTATCCGGTACCTTCATTCTTTTGGCTAAAAGATGGTGATATGATGTCATCAACCA]




>consensus_10188#4
GAAAGCAAAGTGGATGATATACGGTCCATTGGACACAAAAGTAAATATCGGTGATACTTT
GCGCCTGTTTTGTATTATACGACGAATGCAAGAACCATTTTTTGTTCACTGGACACATAA
TGGACAAATATTGAAAAATTCAGCACTAACTAATCAAACAACTGGTATACAAACCTGGGC
AAATTATCCTAAGAATGGATTTTATACTTTAGAATTAAAATCTGTATGTGTACAAGACAA
AGGATTTTATGGAGTGACTGTATCTAGAGTACTCGATATATCTGGTAAAATGGTAAACGA
AACAATANAAGAAGCTGTTTGTTGGGTTGATGTTGAAGGTCAAAAATGCTCGGAAAAGAA
AACCGCTCCAGCATTTATAGATGATGAATTTTCTCCGATGATGGAAGTAATAGCATGTCA
AGTAGTTGAGTTAAAATGTAAAGTGGTTGGTATCCGGTACCTTCATTCTTTTGGCTAAAA
GATGGTGATATGATGTCATCAACCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10188#0      ------------------------------------------------------------
consensus_10188#2      ------------------------------------------------------------
consensus_10188#1      ATGAAAATAAGGCTTTTTATTACTNTGTGAGTAAAGAGAGAACAATGAGGAGCTCTTCTA 60
consensus_10188#3      ------------------------------------------------------------
consensus_10188#4      ------------------------------------------------------------
                                                                                   

consensus_10188#0      ------------------------------------------------------------
consensus_10188#2      ------------------------------------------------------------
consensus_10188#1      AAGAGATACTCGTGTTACCGTTATTGACTATTTGGAAACGAACTCATAAAACTATCAATG 120
consensus_10188#3      ------------------------------------------------------------
consensus_10188#4      ------------------------------------------------------------
                                                                                   

consensus_10188#0      ------------------------------------------------------------
consensus_10188#2      ------------------------------------------------------------
consensus_10188#1      AGAAGAATAGAAAGGCTTTTAACCAAGATCAAATGAGAAATAACTATACAGATGAAAACA 180
consensus_10188#3      ------------------------------------------------------------
consensus_10188#4      ------------------------------------------------------------
                                                                                   

consensus_10188#0      ------------------------------------------------------------
consensus_10188#2      ------------------------------------------------------------
consensus_10188#1      AATATCAACATAACACCACTTTGTTTATTATGTTATACAAGTTATTTAGATCTGTGTATC 240
consensus_10188#3      ------------------------------------------------------------
consensus_10188#4      ------------------------------------------------------------
                                                                                   

consensus_10188#0      ------------------------------------------------------------
consensus_10188#2      ------------------------------------------------------------
consensus_10188#1      GTTTAAATTTTTTGAGATTTAGGAGCTCCGGATGAACTTGTTTTTTGTACAGCTTGTGTT 300
consensus_10188#3      ------------------------------------------------------------
consensus_10188#4      ------------------------------------------------------------
                                                                                   

consensus_10188#0      ------------------------------------------------------------
consensus_10188#2      ------------------------------------------------------AAATCA 6
consensus_10188#1      AACATTAATTTACCAATTGTTTGACCTGCCATCTGAGCAAGACTGTTGCAGTAGAAATCA 360
consensus_10188#3      ---------------------------------------------TTGCAGTATAAATCA 15
consensus_10188#4      -----------------------------------------------------GAAAGCA 7
                                                                                   

consensus_10188#0      ------------------------------------------------------------
consensus_10188#2      AGCTGAGCTGAAACCAACGCAGTATCCAAACGTATTGGAGCCAACTCCCGATTACGTGTT 66
consensus_10188#1      AGCTGAGCTGAAACCAACGCAGTATCCAAACGTATTGGAGCCAACTCCCGATTACGTGTT 420
consensus_10188#3      AGCTGAGCTGAGACCAACGCAGTATTCAAACGTATTGGAGCCAACTCCCGATTACGTGTT 75
consensus_10188#4      AAGTGGATGATATACGGTCCATTGGACACAAAAGTAAATATCGGTGATACTTTGCGCCTG 67
                                                                                   

consensus_10188#0      -----------------------------AGACGATTTTGATAGACTACGTCTGATATGA 31
consensus_10188#2      TCTGTTGCGGTCTTGCCAGCTACCGTAGTTTGAGATTTTGATAGACTACGT-TGATATGA 125
consensus_10188#1      TCTGTTGCGGTCTTGCCAGCTACCGTAGTTTGAGATTTTGATAGACTACGT-TGATATGA 479
consensus_10188#3      TCTGTTGCGGTCTTGCCAGCTACCGTGGTTTGAGATTTTGATAGACTACGT-TGATATGA 134
consensus_10188#4      TTTTGTATTATACGACGAATGCAAGAACCATTTTTTGTTCACTGGACACATAATGGACAA 127
                                                          * ** *  *   ** *     *  *

consensus_10188#0      ATACTGGTAA-TCATGTACTGTTTC-TAAACCCGCAAGAAGA-GAACGTAGCTG--TTGT 86
consensus_10188#2      ATACTGGTAA-TCATGTACTGTTTC-TAAACCCGCAAGAAGA-GAACGTAGCTG--TTGT 180
consensus_10188#1      ATACTGGTAA-TCATGTACTGTTTC-TAAACCCGCAAGAAGA-GAACGTAGCTG--TTGT 534
consensus_10188#3      ATACTGGTAA-TCATGTACTGATTC-TAAACCCGCAAGAATA-GAACGTGAATG--TTGT 189
consensus_10188#4      ATATTGAAAAATTCAGCACTAACTAATCAAACAACTGGTATACAAACCTGGGCAAATTAT 187
                       *** **  ** *   * ***   *  * ** *  *  * * *  *** *       ** *

consensus_10188#0      TCTAA-ACTAGAGGCCATGCTT--AAATTGAGAGTGGAATAACGACCAGG--ATGGTCTT 141
consensus_10188#2      TCTAA-ACTAGAGGCCATGCTT--AAATTGAGAGTGGAATAACGACCAGG--ATGGTCTT 235
consensus_10188#1      TCTAA-ACTAGAGGCCATGCTT--AAATTGAGAGTGGAATAACGACCAGG--ATGGTCTT 589
consensus_10188#3      TCTAA-ACTAGAGGCCATGCTT--AAATTGAGAGTGGAATATCGACCATG--ATGGTCTG 244
consensus_10188#4      CCTAAGAATGGATTTTATACTTTAGAATTAAAATCTGTATGTGTACAAGACAAAGGATTT 247
                        **** * * **    ** ***   **** * *   * **    ** *    * **  * 

consensus_10188#0      TTGGAAGCGGTGGGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACA 201
consensus_10188#2      TTGGAAGCGGTGGGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACA 295
consensus_10188#1      TTGGAAGCGGTGGGGCCAGATCTAGCATTGATGAATTTGTAGAAAGCTCCGATCGCGACA 649
consensus_10188#3      TTGGAAGCGGGGGGGTCAGATCTAGCATCTATGAATGTGTCGAAAGCTCCGATCGCGACA 304
consensus_10188#4      TATGGAGTGACTGTATCTAGAGTAC--TCGATATATCTG-GTAAAATGGTAAACGAAACA 304
                       *  * ** *   *   *     **   *  **  ** **   ***      * **  ***

consensus_10188#0      GTTCTTGATTATCAACGATTTCAGTCAAAAGGATGTTTACGAGATGTGAATTATGAATCA 261
consensus_10188#2      GTTCTTGATTATCAAAGATTTCAGTCAAAAGGATGTTTACGAGATGTGAATTATGAATCA 355
consensus_10188#1      GTTCTTGATTATCAACGATTTCAGTCAAAAGGATGTTTACGAGATGTGAATTATGAATCA 709
consensus_10188#3      GAATTTGATAATCAACGATTTGAGTCAATATGATGCTTACTAAATGCTGCGAAAAGAATA 364
consensus_10188#4      ATANAAGA--AGCTGTTTGTTGGGTTGATGTTGAAGGTCAAAAATGCTCGGAAAAGAAAA 362
                             **  * *      **  **  *         *   * ***      *   *  *

consensus_10188#0      CAACTGGTATCTCTTCTAGAACACGAGTAAAACTGCTGCGACCTACACTGCTTGCCGCTT 321
consensus_10188#2      CAACTGGTATCTCTTCTAGAACACGAGTAAAACTGCTGCGACCTACACTGCTTGCCGCTT 415
consensus_10188#1      CAACTGG-ATCTCTTATAGAACACGAGTAAAAC--CCGCGTGCCGAATTAATGG------ 760
consensus_10188#3      CCGCTGC-AACTTTTATATATGATGAATTATAT--CTATGATGGAAGATATAGCATGTCA 421
consensus_10188#4      CCGCTCC-AGCATTTATAGATGATGAATTTTCTC-CGATGATGGAAGTAATAGCATGTCA 420
                       *  **   * *  ** ** *  * ** *       *   *                    

consensus_10188#0      CACATTCCCATGGGACCTCGGGACCCTTGTGGCCCATCAGACGAAGACGATCTTCAGCCT 381
consensus_10188#2      CACATTCCCATGGGACCTCGGGACCCTTGTGGCCCATCAGACGAAAACGATCTTCAGCCT 475
consensus_10188#1      ------------------------------------------------------------
consensus_10188#3      AGTAATTGAGTTAAAATAGTAAA----TGGGTCGTGATGCGCTACCTTCATTCTTTTGGC 477
consensus_10188#4      AGTAGTTGAGTTAAAATGTAAAG-----TGGTTGGTATCCGGTACCTTCATTCTTTTGGC 475
                                                                                   

consensus_10188#0      CGGATCTTGCAGCGAGAACATCATCAGACAGACGATACGCTTTCAGACCAATTTGACCTC 441
consensus_10188#2      CGGATCTTGCAGCGAGAACATCATCAGACAGACGATACGCTTTCAGACCAATTTGACCTC 535
consensus_10188#1      ------------------------------------------------------------
consensus_10188#3      TAAAACATGGTGATATGATGTCATCCACCAATTT-------------------------- 511
consensus_10188#4      TAAAAGATGGTGATATGATGTCATCAACCA------------------------------ 505
                                                                                   

consensus_10188#0      TGCTAGTTCTTGTTGGGTCATAAG-TCAGCAACACAGATTCAGGGAGATTAATTTGACGT 500
consensus_10188#2      TGCTAGTTCTTGTTGGGTCATAAGGTCAGCAACACAGATTCAGG--------CCTCGTGC 587
consensus_10188#1      ------------------------------------------------------------
consensus_10188#3      ------------------------------------------------------------
consensus_10188#4      ------------------------------------------------------------
                                                                                   

consensus_10188#0      TGATAAATGTTTTCAATATTAGCACGGTTAATAGAGACGCCCCCAGGACCAGCTTGATAA 560
consensus_10188#2      CGAATNTTGGCCTNGA-------------------------------------------- 603
consensus_10188#1      ------------------------------------------------------------
consensus_10188#3      ------------------------------------------------------------
consensus_10188#4      ------------------------------------------------------------
                                                                                   

consensus_10188#0      AATCCTACATTGAGGTAATCTGTTTGTAGTTGTCTTAAATTACGTATCATATTAGCTTCA 620
consensus_10188#2      ------------------------------------------------------------
consensus_10188#1      ------------------------------------------------------------
consensus_10188#3      ------------------------------------------------------------
consensus_10188#4      ------------------------------------------------------------
                                                                                   

consensus_10188#0      TAAGTGACCAAAGCCTCGTTGGCATTTGGATCATCTTCTTGAGTCTTAGGTAATGGGAAG 680
consensus_10188#2      ------------------------------------------------------------
consensus_10188#1      ------------------------------------------------------------
consensus_10188#3      ------------------------------------------------------------
consensus_10188#4      ------------------------------------------------------------
                                                                                   

consensus_10188#0      CAATTAGTGATTTCAAGTTGACTGCCTTGTGCAAGCCCTAACAATACACCATTGACAAAA 740
consensus_10188#2      ------------------------------------------------------------
consensus_10188#1      ------------------------------------------------------------
consensus_10188#3      ------------------------------------------------------------
consensus_10188#4      ------------------------------------------------------------
                                                                                   

consensus_10188#0      TTTTGGCTAGATACAGATTCTTCTTCATAGTGCTTAATCATTTTTAAGAACACCTTTCCT 800
consensus_10188#2      ------------------------------------------------------------
consensus_10188#1      ------------------------------------------------------------
consensus_10188#3      ------------------------------------------------------------
consensus_10188#4      ------------------------------------------------------------
                                                                                   

consensus_10188#0      TCGAACT 807
consensus_10188#2      -------
consensus_10188#1      -------
consensus_10188#3      -------
consensus_10188#4      -------