cluster # 10194

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Schistosoma mansoni
cluster # 10194 cluster # 10194 Sequences # 14 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10194#0 length = 656 sequences # 4
consensus_10194#1 length = 546 sequences # 1
consensus_10194#2 length = 524 sequences # 1

consensus_10194#3 length = 498 sequences # 1
consensus_10194#4 length = 425 sequences # 4
consensus_10194#5 length = 358 sequences # 1
consensus_10194#6 length = 94 sequences # 2

consensusID : consensus_10194#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 656
fasta sequence

                              [ATTCCTCTGCCACTCCAACTGTGCTCTTCACGTCCGTTACCTCTACCACTCCTTTGCTCACAATTGAGACCGGGACTGTCTCCGATTCCACTGGGGTCTTGTCGACCACGGCCTCCTTCTTAACAGTCACAGTCTCCTTGGACTCCGCCACCTGCTCCACAACCAAAGTCTCCTGTTCCGCCACACTACCAGATTCCTCTGCCACTCCAACTGTGCTCTTCACGTCCGTTACCTCTACCACTCCTTTGCTCACAATTGAGACCGGGACTTTCTCTTTTTCCACTAAGGTCTCTTTTAGTGTGATCTTTTTATATGTCACCTTCTCAGTTTGTTTTTCATCTGTTTCAAATTTCTTCATGGCTTGGCATTCTTCTTCTATTTTAGTGGTTTTGTTTTTTTCGAGTTCATTTTTTGTGCTTACCTCTGTCATTTCAGTTTGTTCGGCTTGAATTTCATTTTTCATTTGTTTGTCAGATGTTTCTTCACCCGTAATATCATTTGATTGAATTTGATATTCTTTTTCAGGCAATTTTTGTTTTTCTTCCTGTGTTAATACATTGGCGTCTATAGGTTTTAATTCTGTTTCATTTACATCTGAAACTGCGGCTAAAGAAACGTCATGTAAGGAAATTTCAGTTACACTTGGAATGGACAGA]

[+] EMBL CD091793             [ATTCCTCTGCCACTCCAACTGTGCTCTTCACGTCCGTTACCTCTACCACTCCTTTGCTCACAATTGAGACCGGGACTGTCTCCGATTCCACTGGGGTCTTGTCGACCACGGCCTCCTTCTTAACAGTCACAGTCTCCTTGGACTCCGCCACCTGCTCCACAACCAAAGTCTCCTGTTCCGCCACACTACCAGATTCCTCTGCCACTCCAACTGTGCTCTTCACGTCCGTTACCTCTACCACTCCTTTGCTCACAATTGAG                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD092985             [                                                                                                                             GTCACAGTCTCCTTGGACTCCGCCACCTGCTCCACAACCAAAGTCTCCTGTTCCGCCACACTACCAGATTCCTCTGCCACTCCAACTGTGCTCTTCACGTCCGTTACCTCTACCACTCCTTTGCTCACAATTGAGACCGGGACTTTCTCTTTTTCCACTAAGGTCTCTTTTAGTGTGATCTTTTTATATGTCACCTTCTCAGTTTGTTTTTCATCTGTTTCAAATTTCTTCATGGCTTGGCATTCTTCTTCTATTTTAGTGGTTTTGTTTTTTTCGAGTTCATTTTTTGTGCTTACCTCTGTCATTTCAGTTTGTTCGGCTTGAATTTCATTTTTCATTTGTTTGTCAGATGTT                                                                                                                                                                                 ]
[+] EMBL CD144420             [                                                                                                                                                             CACGACCAAAGTCTCCTGTTCCGCCACACTACCAGATTCCTCTGCCACTCCAACTGTGCTCTTCACGTCCGTTACCTCTACCACTCCTTTGCTCACAATTGAGACCGGGACTTTCTCTTTTTCCACTAAGGTCTCTTTTAGTGTGATCTTTTTATATGTCACCTTCTCAGTTTGTTTTTCATCTGTTTNCAATTTCTTCATGGCTTGGCATTCTTCTTCTATNTTAGTGGTTTTGTTTTTTTCGAGNTCATTTTTTGTGC                                                                                                                                                                                                                                               ]
[-] EMBL CD185378             [                                                                                                                                                                                                                            ttttgtgcTTACCTCTGTCATTTCTTTGCTCACAATTGAGACCGGGACTTTCTCTTTTTCCACTAAGGTCTCTTTTAGTGTGATCTTTTTATATGTCACCTTCTCAGTTTGTTTTTCATCTGTTTCAAATTTCTTCATGGCTTGGCATTCTTCTTCTATTTTAGTGGTTTTGTTTTTTTCGAGTTCATTTTTTGTGCTTACCTCTGTCATTTCAGTTTGTTCGGCTTGAATTTCATTTTTCATTTGTTTGTCAGATGTTTCTTCACCCGTAATATCATTTGATTGAATTTGATATTCTTTTTCAGGCAATTTTTGTTTTTCTTCCTGTGTTAATACATTGGCGTCTATAGGTTTTAATTCTGTTTCATTTACATCTGAAACTGCGGCTAAAGAAACGTCATGTAAGGAAATTTCAGTTACACTTGGAATGGACAGA]




>consensus_10194#0
ATTCCTCTGCCACTCCAACTGTGCTCTTCACGTCCGTTACCTCTACCACTCCTTTGCTCA
CAATTGAGACCGGGACTGTCTCCGATTCCACTGGGGTCTTGTCGACCACGGCCTCCTTCT
TAACAGTCACAGTCTCCTTGGACTCCGCCACCTGCTCCACAACCAAAGTCTCCTGTTCCG
CCACACTACCAGATTCCTCTGCCACTCCAACTGTGCTCTTCACGTCCGTTACCTCTACCA
CTCCTTTGCTCACAATTGAGACCGGGACTTTCTCTTTTTCCACTAAGGTCTCTTTTAGTG
TGATCTTTTTATATGTCACCTTCTCAGTTTGTTTTTCATCTGTTTCAAATTTCTTCATGG
CTTGGCATTCTTCTTCTATTTTAGTGGTTTTGTTTTTTTCGAGTTCATTTTTTGTGCTTA
CCTCTGTCATTTCAGTTTGTTCGGCTTGAATTTCATTTTTCATTTGTTTGTCAGATGTTT
CTTCACCCGTAATATCATTTGATTGAATTTGATATTCTTTTTCAGGCAATTTTTGTTTTT
CTTCCTGTGTTAATACATTGGCGTCTATAGGTTTTAATTCTGTTTCATTTACATCTGAAA
CTGCGGCTAAAGAAACGTCATGTAAGGAAATTTCAGTTACACTTGGAATGGACAGA

consensusID : consensus_10194#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 546
fasta sequence

                              [GGTATGAAAAGGATGAATGTTAACTGGAAGGAACTGGAAAGGATCGCCCAGGACAGGGTTGGATGGAGAATACTGGCGGGTGGCCTATACTCCTCCATGAGGGTTAACAGGCGTAAGTAAGTAATACAATCTACAGTGTAATTTCAGGAGACCAAAATCGATATTTTATGGATTCGAATAATAAGTGTCGATTGTAAAACGAAAGGGATTTTCAGGATTACTGATGACCATATTGTCACTTAGAGCAGAGGAAAATGTGAAGGACTCATAAATATTAGAAGCTATAGTCAGGCTTTAGAAGTACGTACGAAACTAACCTTTTACAACTAATTGCATCGTATAATAATGTATACTGGATGGTGAGTTAAAACGTACGTGACCTCAAAGCCCAAGTATATCTATCTGAGGTTATCATGCGCTGTAATTCTAGAGATAGTTGTTTTATGGCTCACAACTTGAATTTATGTAGGAAAAAGGATTCTAATCTTGGAATTGTGTTTCTCTAACCTCTCACAATGCTCAGTCACCATGGACAGAGTTTTCGCC]

[+] EMBL CD127310             [GGTATGAAAAGGATGAATGTTAACTGGAAGGAACTGGAAAGGATCGCCCAGGACAGGGTTGGATGGAGAATACTGGCGGGTGGCCTATACTCCTCCATGAGGGTTAACAGGCGTAAGTAAGTAATACAATCTACAGTGTAATTTCAGGAGACCAAAATCGATATTTTATGGATTCGAATAATAAGTGTCGATTGTAAAACGAAAGGGATTTTCAGGATTACTGATGACCATATTGTCACTTAGAGCAGAGGAAAATGTGAAGGACTCATAAATATTAGAAGCTATAGTCAGGCTTTAGAAGTACGTACGAAACTAACCTTTTACAACTAATTGCATCGTATAATAATGTATACTGGATGGTGAGTTAAAACGTACGTGACCTCAAAGCCCAAGTATATCTATCTGAGGTTATCATGCGCTGTAATTCTAGAGATAGTTGTTTTATGGCTCACAACTTGAATTTATGTAGGAAAAAGGATTCTAATCTTGGAATTGTGTTTCTCTAACCTCTCACAATGCTCAGTCACCATGGACAGAGTTTTCGCC]




>consensus_10194#1
GGTATGAAAAGGATGAATGTTAACTGGAAGGAACTGGAAAGGATCGCCCAGGACAGGGTT
GGATGGAGAATACTGGCGGGTGGCCTATACTCCTCCATGAGGGTTAACAGGCGTAAGTAA
GTAATACAATCTACAGTGTAATTTCAGGAGACCAAAATCGATATTTTATGGATTCGAATA
ATAAGTGTCGATTGTAAAACGAAAGGGATTTTCAGGATTACTGATGACCATATTGTCACT
TAGAGCAGAGGAAAATGTGAAGGACTCATAAATATTAGAAGCTATAGTCAGGCTTTAGAA
GTACGTACGAAACTAACCTTTTACAACTAATTGCATCGTATAATAATGTATACTGGATGG
TGAGTTAAAACGTACGTGACCTCAAAGCCCAAGTATATCTATCTGAGGTTATCATGCGCT
GTAATTCTAGAGATAGTTGTTTTATGGCTCACAACTTGAATTTATGTAGGAAAAAGGATT
CTAATCTTGGAATTGTGTTTCTCTAACCTCTCACAATGCTCAGTCACCATGGACAGAGTT
TTCGCC

consensusID : consensus_10194#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 524
fasta sequence

                              [ACAGAGAAATCATCGAACTACATCACGAGGCAGGCCCTGGCTTGGAATCCTGAAGGGAAGCGGAAAGAAGGAAAGCTGAAGAACACATTACGTCTGGAAATAGAAACAGATATGAAAAGGATGAATGTTAACTGGAAAGAACTGGAAAGTATTGCCCAGGACAGGGTTGGATGGAGAATTCTGGTGGGCGGCCTATGCTCCTCCACGAGAGGTAACAGGCGTAAAGTAAGTAATATAACAGTATATTATTTACAAATGATAACTGGTATTTTTGGCGATACTATTTTCTCATAAACAAAAAGTTAGAAAACAACATTCATAAAATTAGCAGTAAAACTTATTTCAAAATGCCATTCAAGAGAACAAAATGAATATTCATAAGGAAAATATGTGGTGTGGAAAGAAGGAAAGCTGAAGAACACATTACGTCTGGAAATAGAAACAGATATGAAAAGGATGAATGTTAACTGGAAAGAACTGGAAAGTATTGCCCAGGACAGGGTTGGATGGAGAATTCTGGTGGG]

[+] EMBL CD085997             [ACAGAGAAATCATCGAACTACATCACGAGGCAGGCCCTGGCTTGGAATCCTGAAGGGAAGCGGAAAGAAGGAAAGCTGAAGAACACATTACGTCTGGAAATAGAAACAGATATGAAAAGGATGAATGTTAACTGGAAAGAACTGGAAAGTATTGCCCAGGACAGGGTTGGATGGAGAATTCTGGTGGGCGGCCTATGCTCCTCCACGAGAGGTAACAGGCGTAAAGTAAGTAATATAACAGTATATTATTTACAAATGATAACTGGTATTTTTGGCGATACTATTTTCTCATAAACAAAAAGTTAGAAAACAACATTCATAAAATTAGCAGTAAAACTTATTTCAAAATGCCATTCAAGAGAACAAAATGAATATTCATAAGGAAAATATGTGGTGTGGAAAGAAGGAAAGCTGAAGAACACATTACGTCTGGAAATAGAAACAGATATGAAAAGGATGAATGTTAACTGGAAAGAACTGGAAAGTATTGCCCAGGACAGGGTTGGATGGAGAATTCTGGTGGG]




>consensus_10194#2
ACAGAGAAATCATCGAACTACATCACGAGGCAGGCCCTGGCTTGGAATCCTGAAGGGAAG
CGGAAAGAAGGAAAGCTGAAGAACACATTACGTCTGGAAATAGAAACAGATATGAAAAGG
ATGAATGTTAACTGGAAAGAACTGGAAAGTATTGCCCAGGACAGGGTTGGATGGAGAATT
CTGGTGGGCGGCCTATGCTCCTCCACGAGAGGTAACAGGCGTAAAGTAAGTAATATAACA
GTATATTATTTACAAATGATAACTGGTATTTTTGGCGATACTATTTTCTCATAAACAAAA
AGTTAGAAAACAACATTCATAAAATTAGCAGTAAAACTTATTTCAAAATGCCATTCAAGA
GAACAAAATGAATATTCATAAGGAAAATATGTGGTGTGGAAAGAAGGAAAGCTGAAGAAC
ACATTACGTCTGGAAATAGAAACAGATATGAAAAGGATGAATGTTAACTGGAAAGAACTG
GAAAGTATTGCCCAGGACAGGGTTGGATGGAGAATTCTGGTGGG

consensusID : consensus_10194#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 498
fasta sequence

                              [AAACAGTGCATCGATGCACTATTCGTCGGATATTTAGGGGAAAATCGGAAATTTAGCGACATTTGAAAAACAGAGCGACAGAAAGGGGAAATTACGCTTTATTTCCCCCGCACAGGCGAAAAAGCAGACATTTTGGCGCATTTCCCCTTTATTTACGACTTATTTTCCAATGCATTTTCCGCTTTATTTCCCCTTTGTTCGCCTTTATTTCCCCTTTATTGGTTGTTTGGGTCACAGTGTTTTACGAGGACAAGTTCAAATTCTCAATAATGTCGTATCACTAAATAATCTCAAAACGTTTTCTACTTACAACTTGTAGTGTTTTTTCGTTTTAAACTCATTTTATATAACAGCTTAATGAGATCGTTTCTCAGCTCAGCGTTCACTTACTGTGTGTGTATCAACTCCTTTTTTAATTCATACACACTGTGGTGCATGACATCAAAAGCGTAGGTTAATAGTGTGGAAACTGTNTGAAATCCTTAACTCTTCATTAAC]

[+] EMBL BG931580             [AAACAGTGCATCGATGCACTATTCGTCGGATATTTAGGGGAAAATCGGAAATTTAGCGACATTTGAAAAACAGAGCGACAGAAAGGGGAAATTACGCTTTATTTCCCCCGCACAGGCGAAAAAGCAGACATTTTGGCGCATTTCCCCTTTATTTACGACTTATTTTCCAATGCATTTTCCGCTTTATTTCCCCTTTGTTCGCCTTTATTTCCCCTTTATTGGTTGTTTGGGTCACAGTGTTTTACGAGGACAAGTTCAAATTCTCAATAATGTCGTATCACTAAATAATCTCAAAACGTTTTCTACTTACAACTTGTAGTGTTTTTTCGTTTTAAACTCATTTTATATAACAGCTTAATGAGATCGTTTCTCAGCTCAGCGTTCACTTACTGTGTGTGTATCAACTCCTTTTTTAATTCATACACACTGTGGTGCATGACATCAAAAGCGTAGGTTAATAGTGTGGAAACTGTNTGAAATCCTTAACTCTTCATTAAC]




>consensus_10194#3
AAACAGTGCATCGATGCACTATTCGTCGGATATTTAGGGGAAAATCGGAAATTTAGCGAC
ATTTGAAAAACAGAGCGACAGAAAGGGGAAATTACGCTTTATTTCCCCCGCACAGGCGAA
AAAGCAGACATTTTGGCGCATTTCCCCTTTATTTACGACTTATTTTCCAATGCATTTTCC
GCTTTATTTCCCCTTTGTTCGCCTTTATTTCCCCTTTATTGGTTGTTTGGGTCACAGTGT
TTTACGAGGACAAGTTCAAATTCTCAATAATGTCGTATCACTAAATAATCTCAAAACGTT
TTCTACTTACAACTTGTAGTGTTTTTTCGTTTTAAACTCATTTTATATAACAGCTTAATG
AGATCGTTTCTCAGCTCAGCGTTCACTTACTGTGTGTGTATCAACTCCTTTTTTAATTCA
TACACACTGTGGTGCATGACATCAAAAGCGTAGGTTAATAGTGTGGAAACTGTNTGAAAT
CCTTAACTCTTCATTAAC

consensusID : consensus_10194#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 425
fasta sequence

                              [GCGCGGGATTCGATTGCCCNGACTCTACAATGTTTTCTGTGTGATATGTTTGTGAAGGCCTTGAG---TGTTGTTGTTGTTGTTGTTGTTGTTGTTGAATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTAGGTGTTTCGTATGAGTGAGGGTGTGAATGTGTTTAGAATAGTTGATTGTTTGATTGATTGATGTATGAATGTGTGGATGAATTGATGTAGTTGAGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGAATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTAGGTGTTTCGTATGAGTGAGGGTGTGAATGTGTTTAGAATAGTTGATTGTTTGATTGATTGATGTA]

[+] EMBL CD135275             [GCGCGGGATTCGATTGCCCNGACTCTACAATGTTTTCTGTGTGATATGTTTGTGAAGGCCTTGAGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGAATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTAGGTGTTTCGTATGAGTGAGGGTGTGAATGTGTTTAGAATAGTTGATTGTTTGATTGATTGATGTATGAATGTGTGGATG                                                                                                                                                                                     ]
[+] EMBL CD085321             [                                                 TTGTGAAGGCCTTGAG   TGTTGTTGTTGTTGTTGTTGTTGTTGTTGAATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTAGGTGTTTCGTATGAGTGAGGGTGTGAATGTGTTTAGAATAGTTGATTGTTTGATTGATTGATGTATGAATGTGTGGATGAATTGATGTAGTTGAGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGAATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTAGGTGTTTCGTATGAGTGAGGGTGTGAATGTGTTTAGAATAGTTGATTGTTTGATTGATTGATGTA]
[+] EMBL CD085293             [                                                 TTGTGAAGGCCTTGAG   TGTTGTTGTTGTTGTTGTTGTTGTTGTTGAATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTAGGTGTTTCGTATGAGTGAGGGTGTGAATGTGTTTAGAATAGTTGATTGTTTGATTGATTGATGTATGAATGTGTGGATGAATTGATGTAGTTGAGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGAATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTAGGTGTTTCGTATGAGTGAGGGTGTGAATGTGTTTAGAATAGTTGATTGTTTGATTGATTGATGTA]
[+] EMBL CD085154             [                                                 TTGTGAAGGCCTTGAG      TGTTGTTGTTGTTGTTGTTGTTGTTGCATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTAGGTGTTTCGTATGAGTGAGGGTGTGAATGTGTTTAGAATAGTTGATTGTTTGATTGATTGATGTATGAATGTGTGGATGAATTGATGTAGTTGAGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGAATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTAGGTGTTTCGTATGAGTGAGGGTGTGAATGTGTTTAGAATAGTTGATTGTTTGA            ]




>consensus_10194#4
GCGCGGGATTCGATTGCCCNGACTCTACAATGTTTTCTGTGTGATATGTTTGTGAAGGCC
TTGAGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGAATAGATGTAATAGTTTGGAGTTTAT
GTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTAGGTGTTTCGTATGAG
TGAGGGTGTGAATGTGTTTAGAATAGTTGATTGTTTGATTGATTGATGTATGAATGTGTG
GATGAATTGATGTAGTTGAGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGAATAGATGTAA
TAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTA
GGTGTTTCGTATGAGTGAGGGTGTGAATGTGTTTAGAATAGTTGATTGTTTGATTGATTG
ATGTA

consensusID : consensus_10194#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 358
fasta sequence

                              [TGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTAATGAGTACATCAGTGAAGTACAATCTGGCCGTTGCTATGGTAATCCTGTTTAGTACGAGAGGAACCGCAGGTTCAGATAATTGGTATATGTGCCTGGTCGAAAGGCCAATGGTGCGAAGCTACCATCTGAGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCAAATTTGCAACGGTACATTCTGTATCCGACACGTGGCTGGGCAAGCTTACGTATTCCTTTTGGTGTCTGGACTGGACCATGTGTTCGGCTAGTCCACAGTCTATCACCGTACCA]

[+] EMBL BG931992             [TGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTAATGAGTACATCAGTGAAGTACAATCTGGCCGTTGCTATGGTAATCCTGTTTAGTACGAGAGGAACCGCAGGTTCAGATAATTGGTATATGTGCCTGGTCGAAAGGCCAATGGTGCGAAGCTACCATCTGAGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCAAATTTGCAACGGTACATTCTGTATCCGACACGTGGCTGGGCAAGCTTACGTATTCCTTTTGGTGTCTGGACTGGACCATGTGTTCGGCTAGTCCACAGTCTATCACCGTACCA]




>consensus_10194#5
TGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTT
AGTTTTACCCTACTAATGAGTACATCAGTGAAGTACAATCTGGCCGTTGCTATGGTAATC
CTGTTTAGTACGAGAGGAACCGCAGGTTCAGATAATTGGTATATGTGCCTGGTCGAAAGG
CCAATGGTGCGAAGCTACCATCTGAGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCC
GTCCAAATTTGCAACGGTACATTCTGTATCCGACACGTGGCTGGGCAAGCTTACGTATTC
CTTTTGGTGTCTGGACTGGACCATGTGTTCGGCTAGTCCACAGTCTATCACCGTACCA

consensusID : consensus_10194#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 94
fasta sequence

                              [ACGGTGATAGACTGAGGGCTGGAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGGCTTGCAATTATTC]

[+] EMBL BG932010             [ACGGTGATAGACTGAGGGCTGGAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGGCTTGCAATTATTC]
[+] EMBL BG932014             [ACTGTGATAAACTGAGGGCTGGAAAGCTGGCCCGAAAGGGTTGGGCAAACTGTATCATCACCGTTGTGACTGGGATCGGGGCTTGCAATTATTC]




>consensus_10194#6
ACGGTGATAGACTGAGGGCTGGAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCA
CCGTCGTGACTGGGATCGGGGCTTGCAATTATTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10194#1      ------------------------------------------------------------
consensus_10194#2      ACAGAGAAATCATCGAACTACATCACGAGGCAGGCCCTGGCTTGGAATCCTGAAGGGAAG 60
consensus_10194#6      ------------------------------------------------------------
consensus_10194#0      --------ATTCCTCTGCCACTCCAACTGTGCTCTTCACGTCCGTTACCTCTACCACTCC 52
consensus_10194#4      ------------------------------------------------------------
consensus_10194#3      ------------------------------------------------------------
consensus_10194#5      ------------------------------------------------------------
                                                                                   

consensus_10194#1      ------------------------------------------------GGTATGAAAAGG 12
consensus_10194#2      CGGAAAGAAGGAAAGCTGAAGAACACATTACGTCTGGAAATAGAAACAGATATGAAAAGG 120
consensus_10194#6      ------------------------------------------------------------
consensus_10194#0      TTTGCTCACAATTGAGACCGGGACTGTCTCCGATTCCACTGGGGTCTTGTCGACCACGGC 112
consensus_10194#4      ----------------------------------------------------------GC 2
consensus_10194#3      --------------------AAACAGTGCATCGATGCACTATTCGTCGGATATTTAGGGG 40
consensus_10194#5      --------------------------------------------------------TGGA 4
                                                                                   

consensus_10194#1      ATGAATGTTAACTGGAAGGAACT----GGAAAGGATCGCCCAGGACAGGGTTGGA--TGG 66
consensus_10194#2      ATGAATGTTAACTGGAAAGAACT----GGAAAGTATTGCCCAGGACAGGGTTGGA--TGG 174
consensus_10194#6      ACGGTGATAGACTG---AGGGCT----GGAAACC-TGGCCC--GAAAGGGTTGGG--CAA 48
consensus_10194#0      CTCCTTCTTAACAGTCACAGTCTCCTTGGACTCCGCCACCTGCTCCACAACCAAAG-TCT 171
consensus_10194#4      GCGGGATTCGATTGCCCNGACTC---TACAATGTTTTCTGTGTGATATGTTTGTGA-AGG 58
consensus_10194#3      AAAATCGGAAATTTAGCGACATT---TGAAAAACAGAGCGACAGAAAGGGGAAATTACGC 97
consensus_10194#5      TTGTTCACCCACTAATAGGGAAC-----GTGAGCTGGGTTTAGACCGTCGTGAGA--CAG 57
                                 *                                                 

consensus_10194#1      AGAATACTGGCGG-GTGGCCTATACTCCTC-CATGAGGGTTAACAGGCGTAA-GTAAGTA 123
consensus_10194#2      AGAATTCTGGTGG-GCGGCCTATGCTCCTC-CACGAGAGGTAACAGGCGTAAAGTAAGTA 232
consensus_10194#6      ACTGTTTCATCA---CCGTCGTGACTGGG---ATCGGGGCTTGCAATTATTC-------- 94
consensus_10194#0      CCTGTTCCGCCAC-ACTACC-AGATTCCTC-TGCCACTCCAACTGTGCTCTTCACGTCCG 228
consensus_10194#4      CCTTGAGTGTTGTTGTTGTTGTTGTTGTT---GTTGTTGAATAGATGTAATAGTTTGGAG 115
consensus_10194#3      TTTATTTCCCCCGCACAGGCGAAAAAGCAGACATTTTGGCGCATTTCCCCTTTATTTACG 157
consensus_10194#5      GTTAGTTTTACCCTACTAATGAGTACATCA--GTGAAGTACAATCTGGCCGTTGCTATGG 115
                                                                                   

consensus_10194#1      ATACAATCTACAGTGTAATTTCAGG---AGACCAAAATCGATATTTTATGGATTCGAATA 180
consensus_10194#2      ATATAA----CAGTATATTATTTAC---AAATGATAACTGGTATTTT-TGGC----GATA 280
consensus_10194#6      ------------------------------------------------------------
consensus_10194#0      TTACCTCTACCACTCCTTTGCTCAC---A-ATTGAGACCGGGACTTTCTCTTTTTCCACT 284
consensus_10194#4      TTTATGTGTTGATGTGAATGTTGGT---AAATTGTTGTGTAGTGTTTCTGGTAGGTGTTT 172
consensus_10194#3      ACTTATTTTCCAATGCATTTTCCGCTTTATTTCCCCTTTGTTCGCCTTTATTTCCCCTTT 217
consensus_10194#5      TAATCCTGTTTAGTACGAGAGGAACCGCAGGTTCAGATAATTGGTATATGTGCCTGGTCG 175
                                                                                   

consensus_10194#1      ATAAGTGTCGATTG-TAAAACGAAAGGGATTTTCAGGATTACTGATGACCATAT-TGTCA 238
consensus_10194#2      CTATTTTCTCATAAACAAAAAGTTAGAAAA---CAACATTCATAAAATTAGCAG-TAAAA 336
consensus_10194#6      ------------------------------------------------------------
consensus_10194#0      AAGGTCTCTTTTAGTGTGATCTTTTTATATGTCACCTTCTCAGTTTGTTTTTCA-TCTGT 343
consensus_10194#4      CGTATGAGTGAGGGTGTGAATGTGTTTAGAATAGTTGATTGTTTGATTGATTGA-TGTA- 230
consensus_10194#3      ATTGGTTGTTTGGGTCACAGTGTTTTACGAGGACAAGTTCAAATTCTCAATAAT-GTCGT 276
consensus_10194#5      AAAGGCCAATGGTGCGAAGCTACCATCTGAGGGATTAAGACTGAACGCCTCTAAGTCTGA 235
                                                                                   

consensus_10194#1      CTTAGAGCAGAGGAAAATGTGAAGGACTCATAAATATTAGAAGCTATAGTCAGGCTTTAG 298
consensus_10194#2      CTTATTTCAAAATGCCATTCAAGAGA---ACAAA-ATGAATATTCATAAGGAAAATAT-G 391
consensus_10194#6      ------------------------------------------------------------
consensus_10194#0      TTCAAATTTCTTCATGGCTTGGCATTCTTCTTCTATTTTAGTGGTTTTGTTTTTTTCGAG 403
consensus_10194#4      --TGAATGTGTGGATGAATTGATGTAGTTGAGTGTTGTTGTTGTTGTTGTTGTTGTT--G 286
consensus_10194#3      ATCACTAAATAATCTCAAAACGTTTTCTACTTACAACTTGTAGTGTTTTTTCGTTTTAAA 336
consensus_10194#5      ATCCCGTCCAAATTTGCAACGGTACATTCTGTATCCGACACGTGGCTGGGCAAGCTTACG 295
                                                                                   

consensus_10194#1      AAGTACGTACGAAACTAACCTTTTACAACTAATTGCATCGTATAATAATGTATACTGG-A 357
consensus_10194#2      TGGTGTGGAAAGAAGGAAAGCTGAAGAACACATTACGTC---TGGAAATAGAAACAGATA 448
consensus_10194#6      ------------------------------------------------------------
consensus_10194#0      TTCATTTTTTGTGCTTACCTCTGTCATTTCAGTTTGTTCGGCTTGAATTTCATTTTTCAT 463
consensus_10194#4      TTGAATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTG 346
consensus_10194#3      CTCATTTTATATAACAGCTTAATGAGATCGTTTCTCAGC---TCAGCGTTCACTTACTGT 393
consensus_10194#5      TATTCCTTTTGGTGTCTGGACTGGACCATGTGTTCGGCTAGTCCACAGTCTATCACCGTA 355
                                                                                   

consensus_10194#1      TGGTGAGTTAAAA-CGTACGTGACCTCAAAGCCCAA--GTATATCTATCTGAGGTTATCA 414
consensus_10194#2      TGAAAAGGATGAA-TGT---TAACTGGAAAGAACTG--GAAAGTATTGCCCAGGACAGGG 502
consensus_10194#6      ------------------------------------------------------------
consensus_10194#0      TTGTTTGTCAGAT-GTTTCTTCACCCGTAATATCAT--TTGATTGAATTTGATATTCTTT 520
consensus_10194#4      TAGTGTTTCTGGTAGGTGTTTCGTATGAGTGAGGGT--GTGAATGTGTTTAGAATAGTTG 404
consensus_10194#3      GTGTGTATCAACTCCTTTTTTAATTCATACACACTGTGGTGCATGACATCAAAAGCGTAG 453
consensus_10194#5      CCA--------------------------------------------------------- 358
                                                                                   

consensus_10194#1      TGCGCTGTA--ATTCTAGAGATAGTTGTTTTATGGCTCACAACTTGAATTTATGTAGGAA 472
consensus_10194#2      TTGGATGGAGAATTCTGGTGGG-------------------------------------- 524
consensus_10194#6      ------------------------------------------------------------
consensus_10194#0      TTCAGGCAATTTTTGTTTTTCTTCCTGTGTTAATACATTGGCGTCTATAGGTTTTAATTC 580
consensus_10194#4      ATTGTTTGATTGATTGATGTA--------------------------------------- 425
consensus_10194#3      GTTAATAGTGTGGAAACTGTNTGAAATCCTTAACTCTTCATTAAC--------------- 498
consensus_10194#5      ------------------------------------------------------------
                                                                                   

consensus_10194#1      AAAGGATTCTAATCTTGGAATTGTGTTTCTCTAACCTCTCACAATGCTCAGTCACCATGG 532
consensus_10194#2      ------------------------------------------------------------
consensus_10194#6      ------------------------------------------------------------
consensus_10194#0      TGTTTCATTTACATCTGAAACTGCGGCTAAAGAAACGTCATGTAAGGAAATTTCAGTTAC 640
consensus_10194#4      ------------------------------------------------------------
consensus_10194#3      ------------------------------------------------------------
consensus_10194#5      ------------------------------------------------------------
                                                                                   

consensus_10194#1      ACAGAGTTTTCGCC-- 546
consensus_10194#2      ----------------
consensus_10194#6      ----------------
consensus_10194#0      ACTTGGAATGGACAGA 656
consensus_10194#4      ----------------
consensus_10194#3      ----------------
consensus_10194#5      ----------------