cluster # 10198

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Schistosoma mansoni
cluster # 10198 cluster # 10198 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10198#0 length = 926 sequences # 2
consensus_10198#1 length = 749 sequences # 8

consensus_10198#2 length = 613 sequences # 2
consensus_10198#3 length = 414 sequences # 2

consensusID : consensus_10198#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 926
fasta sequence

                              [GAGGTGGACTTTTGATGTGCAATCTATGAAACAGTGCTTACTTCAATATCCTAGTCTCTTAGAACGAATGGCTTCATTAATGAATATAAATACTTTAAATGAACCAAATGAGGATATCGCTTCAGATATTTGTAAAAATGTATGGAAATATTGTAGATATTATAAATTATCAACACAGGAGAATATGTCATTGTTATCACAAGTACCTGAGTTACAACAAACAATGTGGTATGTATTGGATGAAGTTGGATCACGTATTCAACATTCTGATGAGCCTACAGGTATTTACATATATATATGAGCGTGACTACTATTATGTAAATTTAAATTGGTAAATTTCTACCAGGCATTTATAAGATAAACAAACAACGTCAACTGTTTAAAGAAACTTTTTCTCAACAATTTTCACTCAAGGTTCTATAGTTATTAAGTCTGTATATTTTCAGAATGATACCAAGCGTATGTATATATTCGGTGTTTGGAGGTTGTCAGCGGGGAACTCTGGACTTGGTTTTCGTGCTGTTCGATACTCATAAACAAGCTCGTATGGTACCATTTTACTATGTACCACGTAACTTATGTTACTCTGTGTTCTGGCCCATTANAGATTTACANAGAAATGATAGTATCACAACTGACTATGTAGAACATGTAAAAAATCCTGAATTACGACCCTATTATTTATTACCTTGGGAATCAGAAGATTTTTCTATTGAACCTATTGAACATACATACATTTTGACAGATGAATATTTTACATCTCATCGAGTACANAAAAAATTACCCATTTGTCAAATCAATG-ACCCATTTAACGGGGATAATTTTATTGTTAATACTGGATTGGAA-CAAGTCCAACAATA-TTAACTCATTCCCAA-TTACTTTTG-TGAATC-CCAGA-AAAGCTTGA-ATTA-TTGAATG-GTACCCTTTTC]

[+] EMBL CD079373             [GAGGTGGACTTTTGATGTGCAATCTATGAAACAGTGCTTACTTCAATATCCTAGTCTCTTAGAACGAATGGCTTCATTAATGAATATAAATACTTTAAATGAACCAAATGAGGATATCGCTTCAGATATTTGTAAAAATGTATGGAAATATTGTAGATATTATAAATTATCAACACAGGAGAATATGTCATTGTTATCACAAGTACCTGAGTTACAACAAACAATGTGGTATGTATTGGATGAAGTTGGATCACGTATTCAACATTCTGATGAGCCTACAGGTATTTACATATATATATGAGCGTGACTACTATTATGTAAATTTAAATTGGTAAATTTCTACCAGGCATTTATAAGATAAACAAACAACGTCAACTGTTTAAAGAAACTTTTTCTCAACAATTTTCACTCAAGGTTCTATAGTTATTAAGTCTGTATATTTTCAGAATGATACCAAGCGTATGTATATATTCGGTGTTTGGAGGTTGTCAGCGGGGAACTCTGGACTTGGTTTTCGTGCTGTTCGATACTCATAAACAAGCTCGTATGGTACCATTTTACTATGTACCACGTAACTTATGTTACTCTGTGTTCTGGCCCATTANAGATTTACANAGAAATGATAGTATCACAACTGACTATGTAGAACATGTAAAAAATCCTGAATTACGACCCTATTATTTATTACCTTGGGAATCAGAAGATTTTTCTATTGAACCTATTGAACATACATACATTTTGACAGATGAATATTTTACATCTCATCGAGTACANAAAAAATTACCCATTTGTCAAATCAATG ACCCATTTAACGGGGATAATTTTATTGTTAATACTGGATTGGAA CAAGTCCAACAATA TTAACTCATTCCCAA TTACTTTTG TGAATC CCAGA AAAGCTTGA ATTA TTGAATG GTACCCTT   ]
[-] EMBL CD073650             [                                                                                                                                                                                                                                                                                                                                                                                                         TCTCAACAATTTTCACTCAAGGTTCTATAGTTATTAAGTCTGTATATTTTCAGAATGATACCAAGCGTATGTATATATTCGGTGTTTGGAGGTTGTCAACGGGGAACTCTGGACTTGGTTTTCGTGCTGTTCGATACTCATAAACAAGCTCGTATGGTACCATTTTACTATGTACCACGTAACTTATGTTACTCTGTGTTCTGGCCCATTAAAGATTTACAAAGAAATGATAGTATCCCAACTGACTATGTAGAACATGTAAAAAATCCTGAATTACGACCTTATTATTTATTACCTTGGGAATCAGAAGATTTTTTTATTGAACCTATTGAACATACATACATTTTGACAGATGAATATTTTACATTTCATCGAGTACAAGAAAAATTACCAATATGTCAAATCAATGAACCAATTAAACGGGAAT ATTTTACTGTTTATACT GATTTGAATCAAGTCAAACAATATTTAACTCATTCACAATTTACTTTTGTTGATTCACCAGATAAAGC TGATATTATTTGGATGTATACACATTTC]




>consensus_10198#0
GAGGTGGACTTTTGATGTGCAATCTATGAAACAGTGCTTACTTCAATATCCTAGTCTCTT
AGAACGAATGGCTTCATTAATGAATATAAATACTTTAAATGAACCAAATGAGGATATCGC
TTCAGATATTTGTAAAAATGTATGGAAATATTGTAGATATTATAAATTATCAACACAGGA
GAATATGTCATTGTTATCACAAGTACCTGAGTTACAACAAACAATGTGGTATGTATTGGA
TGAAGTTGGATCACGTATTCAACATTCTGATGAGCCTACAGGTATTTACATATATATATG
AGCGTGACTACTATTATGTAAATTTAAATTGGTAAATTTCTACCAGGCATTTATAAGATA
AACAAACAACGTCAACTGTTTAAAGAAACTTTTTCTCAACAATTTTCACTCAAGGTTCTA
TAGTTATTAAGTCTGTATATTTTCAGAATGATACCAAGCGTATGTATATATTCGGTGTTT
GGAGGTTGTCAGCGGGGAACTCTGGACTTGGTTTTCGTGCTGTTCGATACTCATAAACAA
GCTCGTATGGTACCATTTTACTATGTACCACGTAACTTATGTTACTCTGTGTTCTGGCCC
ATTANAGATTTACANAGAAATGATAGTATCACAACTGACTATGTAGAACATGTAAAAAAT
CCTGAATTACGACCCTATTATTTATTACCTTGGGAATCAGAAGATTTTTCTATTGAACCT
ATTGAACATACATACATTTTGACAGATGAATATTTTACATCTCATCGAGTACANAAAAAA
TTACCCATTTGTCAAATCAATGACCCATTTAACGGGGATAATTTTATTGTTAATACTGGA
TTGGAACAAGTCCAACAATATTAACTCATTCCCAATTACTTTTGTGAATCCCAGAAAAGC
TTGAATTATTGAATGGTACCCTTTTC

consensusID : consensus_10198#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 749
fasta sequence

                              [TAAAGAATTCATCAAATTACACGATGATCAACTAAGAGCAAGTGGAATTCCTAGTCTATTTTGGCGTAGACTACANCGAAAAACTTTTACATGAGGTGTTGTATTTGATTTTGTTACTTTGCATAATATTTTTTACAGATATATGATGCTAACACAAGTGTTATGATGCAACAAATCGAATATACAAATGACGAAGGTGATGATAATGAAATTGGAAGCGAAGAGTTGACTGTTAATCGTGACTGGAATATCTTAGTTTGTAGTGATCAACTTTTAGTGTCAGATAGTAATAATATATTTCTCGTTGACCATGCGTGGACTTTTGATGTGCAATCTATGAAACAGTGCTTACTTCAATATCCTAGTCTCTTAGAACGAATGGCTTCATTAATGAATATAAATACTTTAAATGAACCAAATGAGGATATCGCTTCAGATATTTGTAAAAATGAGAATATGTCATTGTTATCACAAGTACCTGAGTTACAACAAACAATGTGGTATGTATTGGATGAAGTTGGATCACGTATTCAACATTCTGATGAGCCTACAGGCATTTATAAGATAAACAAACAACGTCAACTGTTTAAAGAAACTTTTTCTCAACAATTTTCACTCAAGAATGATACCAAGCGTATGTATATATTCGGTGTTTGGAGGTTGTCAGCGGGGAACTCTGGACTTGGTTTTCGTGCTGTTCGATACTCATAAACAAGCTCGTATGGTACCATTTTACTATGTACCACGTA]

[+] EMBL CD179613             [TAAAGAATTCATCAAATTACACGATGATCAACTAAGAGCAAGTGGAATTCCTAGTCTATTTTGGCGTAGACTACANCGAAAAACTTTTACATGAGGTGTTGTATTTGATTTTGTTACTTTGCATAATATTTTTTACAGATATATGATGCTAACACAAGTGTTATGATGCAACAAATCGAATATACAAATGACGAAGGTGATGATAATGAAATTGGAAGCGAAGAGTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD120072             [                                                                                                                                                                TTATGATGCATCAAATCGAATATACAAATGACGAAGGTGATGATAATGAAATTGGAAGCGAAGAGTTGACTGTTAATCGTGACTGGAATATCTTAGTTTGTAGTGATCAACTTTTAGTGTCAGATAGTAATAATATATTTCTCGTTGACCATGCGTGGACTTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD120053             [                                                                                                                                                                 TATGATGCAACAAATCGAATATACAAATGACGAAGGTGATGATAATGAAATTGGAAGCGAAGAGTTGACTGTTAATCGTGACTGGAATATCTTAGTTTGTAGTGATCAACTTTTAGTGTCAGATAGTAATAATATATTTCTCGTTGACCATGCGTGGACTTTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD120274             [                                                                                                                                                                 TATGATGCAACAAATCGAATATACAAATGACGAAGGTGATGATAATGAAATTGGAAGCGAAGAGTTGACTGTTAATCGTGACTGGAATATCTTAGTTTGTAGTGATCAACTTTTAGTGTCAGATAGTAATAATATATTTCTCGTTGACCATGCGTGGACTTTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD152633             [                                                                                                                                                                                                                              GAGTTGACTGTTAATCGTGACTGGAATATCTTAGTTTGTAGTGATCAACTTTTAGTGTCAGATAGTAATAATATATTTCTCGTTGACCATGCGTGGACTTTTGATGTGCAATCTATGAAACAGTGCTTACTTCAATATCCTAGTCTCTTAGAACGAATGGCTTCATTAATGAATATAAATACTTTAAATGAACCAAATGAGGATATCGCTTCAGATATTTGTAAAAATGAGAATATGTCATTGTTATCACAAGTACCTGAGTTACAACAAACAATGTGGTATGTATTGGATGAAGTTGGATCACGTATTCAACATTCTGATGAGCCTACAGGCATTTATAAGATAAACAAACAACGTCAACTGTTTAAAGAAACTTTTTCTCAACAATTTTCACTCAAGAATGATACCAAGCGTATGTATATATTCGGTGTTTGGAGGTTGTCAGCGGGGAACTCTGGACTTGGTTTTCGTGCTGTTCGATACTCATAAACAAGCTCGTATGGTACCATTTTACTATGTACCACGTA]
[+] EMBL CD152948             [                                                                                                                                                                                                                              GAGTTGACTGTTAATCGTGACTGGAATATCTTAGTTTGTAGTGATCAACTTTTAGTGTCAGATAGTAATAATATATTTCTCGTTGACCATGCGTGGACTTTTGATGTGCAATCTATGAAACAGTGCTTACTTCAATATCCTAGTCTCTTAGAACGAATGGCTTCATTAATGAATATAAATACTTTAAATGAACCAAATGAGGATATCGCTTCAGATATTTGTAAAAATGAGAATATGTCATTGTTATCACAAGTACCTGAGTTACAACAAACAATGTGGTATGTATTGGATGAAGTTGGATCACGTATTCAACATTCTGATGAGCCTACAGGCATTTATAAGATAAACAAACAACGTCAACTGTTTAAAGAAACTTTTTCTCAACAATTTTCACTCAAGAATGATACCAAGCGTATGTATATATTCGGTGTTTGGAGGTTGTCAGCGGGGAACTCTGGACTTGGTTTTCGTGCTGTTCGATACTCATAAACAAGCTCGTATGGTACCATTTTACTATGTACCACGTA]
[+] EMBL CD152638             [                                                                                                                                                                                                                              gtGTTGACTGTTAATCGTGACTGGAATATCTTAGTTTGTAGTGATCAACTTTTAGTGTCAGATAGTAATAATATATTTCTCGTTGACCATGCGTGGACTTTTGATGTGCAATCTATGAAACAGTGCTTACTTCAATATCCTAGTCTCTTAGAACGAATGGCTTCATTAATGAATATAAATACTTTAAATGAACCAAATGAGGATATCGCTTCAGATATTTGTAAAAATGAGAATATGTCATTGTTATCACAAGTACCTGAGTTACAACAAACAATGTGGTATGTATTGGATGAAGTTGGATCACGTATTCAACATTTTGATGA                                                                                                                                                                                                            ]
[+] EMBL CD152655             [                                                                                                                                                                                                                              gtGTTGACTGTTAATCGTGACTGGAATATCTTAGTTTGTAGTGATCAACTTTTAGTGTCAGATAGTAATAATATATTTCTCGTTGACCATGCGTGGACTTTTGATGTGCAATCTATGAAACAGTGCTTACTTCAATATCCTAGTCTCTTAGAACGAATGGCTTCATTAATGAATATAAATACTTTAAATGAACCAAATGAGGATATCGCTTCAGATATTTGTAAAAATGAGAATATGTCATTGTTATCACAAGTACCTGAGTTACAACAAACAATGTGGTATGTATTGGATGAAGTTGGATCACGTATTCAACATTCTGATGAGCCTACAGGCATTTATAAGATAAACAAACAACGTCAACTGTTTAAAGAAACTTTTTCTCAACAATTTTCACTCAAGAATGATACCAAGCGTATGTATATATTCGGTGTTTGGAGGTTGTCANCGGGGAACTCTGGACTTGGTTTTCGTGCTGTTCGATACTCATAAACAAGCTCGTATGGTACCATTTTACTATGTACCACGTA]




>consensus_10198#1
TAAAGAATTCATCAAATTACACGATGATCAACTAAGAGCAAGTGGAATTCCTAGTCTATT
TTGGCGTAGACTACANCGAAAAACTTTTACATGAGGTGTTGTATTTGATTTTGTTACTTT
GCATAATATTTTTTACAGATATATGATGCTAACACAAGTGTTATGATGCAACAAATCGAA
TATACAAATGACGAAGGTGATGATAATGAAATTGGAAGCGAAGAGTTGACTGTTAATCGT
GACTGGAATATCTTAGTTTGTAGTGATCAACTTTTAGTGTCAGATAGTAATAATATATTT
CTCGTTGACCATGCGTGGACTTTTGATGTGCAATCTATGAAACAGTGCTTACTTCAATAT
CCTAGTCTCTTAGAACGAATGGCTTCATTAATGAATATAAATACTTTAAATGAACCAAAT
GAGGATATCGCTTCAGATATTTGTAAAAATGAGAATATGTCATTGTTATCACAAGTACCT
GAGTTACAACAAACAATGTGGTATGTATTGGATGAAGTTGGATCACGTATTCAACATTCT
GATGAGCCTACAGGCATTTATAAGATAAACAAACAACGTCAACTGTTTAAAGAAACTTTT
TCTCAACAATTTTCACTCAAGAATGATACCAAGCGTATGTATATATTCGGTGTTTGGAGG
TTGTCAGCGGGGAACTCTGGACTTGGTTTTCGTGCTGTTCGATACTCATAAACAAGCTCG
TATGGTACCATTTTACTATGTACCACGTA

consensusID : consensus_10198#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 613
fasta sequence

                              [TGTTACTAGGATGAATATTTTACATCTCATCGAGTACAAGAAAAATTACCAATATGTCAAATCAATGAACCAATTAAACGGGAATATTTTACTGTTTATACTGATTTGAATCAAGTCAAACAATATTTAACTCATTCACAATTTACTTTTGTTGATTCACCAGATAAAGCTGATATTATCTGGATGTATACACATTTCAAGGATTTTGAACGATTATCTATAGACAGTCCAAATACGTATATTAATCAGTTCCCTGGTGAGTACGTCTTCACCGTTAAGGATTATCTAGCTAGTTTAGCAGCAAGTTTAGCTAAAGAAACTTATATGCAACAATCTAACGATCTAATGTATGATAATATTGATGCAAAACTTTCAACCAATTGGTATCCAGTTACATTTAACTTAGTGTACGAACTTCCACAATTTTGTGCTTATTTCCAATCGAATTATAATAAAATCATTAGTACTAATGAAGAACCTGGAAGAAATGATAGACATAATTTATGGATATTGAAGCCTTGGAATCTTGGTCGAGGTGTGGGGATTGTGATTACTGACAATTTGGATAGGATAATAAAAACTTGTGATGGTAACCCAATGATCGCTAGTACAA]

[+] EMBL CD134261             [TGTTACTAGGATGAATATTTTACATCTCATCGAGTACAAGAAAAATTACCAATATGTCAAATCAATGAACCAATTAAACGGGAATATTTTACTGTTTATACTGATTTGAATCAAGTCAAACAATATTTAACTCATTCACAATTTACTTTTGTTGATTCACCAGATAAAGCTGATATTATCTGGATGTATACACATTTCAAGGATTTTGAACGATTATCTATAGACAGTCCAAATACGTATATTAATCAGTTCCCTGGTGAGTACGTCTTCACCGTTAAGGATTATCTAGCTAGTTTAGCAGCAAGTTTAGCTAAAGAAACTTATATGCAACAATCTAACGATCTAATGTATGATAATATTGATGCAAAACTTTCAACCAATTGGTATCCAGTTACATTTAACTTAGTGTACGAACTTCCACAATTTTGTGCTTATTTCCAATCGAATTATAATAAAATCATTAGTACTAATGAAGAACCTGGAAGAAATGATAGACATAATTTATGGATATTGAAGCCTTGGAATCTTGGTCGAGGTGTGGGGATTGTGATTACTGACAATTTGGATAGGATAATAAAAACTTGTGATGGTAACCCAATGATCGCTAGTACAA]
[-] EMBL CD064964             [                                                                      CAATTAAACGGGAATATTTTACTGTTTATACTGATTTGAATCAAGTCAAACAATATTTAACTCATTCACAATTTACTTTTGTTGATTCACCAGATAAAGCTGATATTATCTGGATGTATACACATTTCAAGGATTTTGAACGATTATCTATAGACAGTCCAAATACGTATATTAATCAGTTCCCTGGTGAGTACGTCTTCACCGTTAAGGATTATCTAGCTAGTTTAGCAGCAAGTTTAGCTAAAGAAACTTATATGCAACAATCTAACGATCTAATGTATGATAATATTGATGCAAAACTTTCAACCAATTGGTATCCAGTTACATTTAACTTAGTGTATGTACTTCCACAATTTTGTGCTTATTTCCAATCGAATTATAATAAAATCATTAGTACTAATGAAGAACCTGGAAGAAATGATAGACATAATTTATGGATATTGAAGCCTTGGAATCTTGGTCGAGGTGTGGGGATTGTGATTACTGACAATTTGGATAGGAT                                         ]




>consensus_10198#2
TGTTACTAGGATGAATATTTTACATCTCATCGAGTACAAGAAAAATTACCAATATGTCAA
ATCAATGAACCAATTAAACGGGAATATTTTACTGTTTATACTGATTTGAATCAAGTCAAA
CAATATTTAACTCATTCACAATTTACTTTTGTTGATTCACCAGATAAAGCTGATATTATC
TGGATGTATACACATTTCAAGGATTTTGAACGATTATCTATAGACAGTCCAAATACGTAT
ATTAATCAGTTCCCTGGTGAGTACGTCTTCACCGTTAAGGATTATCTAGCTAGTTTAGCA
GCAAGTTTAGCTAAAGAAACTTATATGCAACAATCTAACGATCTAATGTATGATAATATT
GATGCAAAACTTTCAACCAATTGGTATCCAGTTACATTTAACTTAGTGTACGAACTTCCA
CAATTTTGTGCTTATTTCCAATCGAATTATAATAAAATCATTAGTACTAATGAAGAACCT
GGAAGAAATGATAGACATAATTTATGGATATTGAAGCCTTGGAATCTTGGTCGAGGTGTG
GGGATTGTGATTACTGACAATTTGGATAGGATAATAAAAACTTGTGATGGTAACCCAATG
ATCGCTAGTACAA

consensusID : consensus_10198#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 414
fasta sequence

                              [AATCAGGTCTAAGGGAATTAGAAGTTCTTAAAAAACTCAACGATGCTGACCCGCAAGATCGTTTTCATTGCCTGCGACTTTATATTAATCAGTTCCCTGGTGAGTACGTCTTCACCGTTAAGGATTATCTAGCTAGTTTAGCAGCAAGTTTAGCTAAAGAAACTTATATGCAACAATCTAACGATCTAATGTATGATAATATTGATGCAAAACTTTCAACCAATTGGTATCCAGTTACATTTAACTTAGTGTATGAACTTCCACAATTTTGTGCTTATTTCCAATCGAATTATAATAAAATCATTAGTACTAATGAAGAACCTGGAAGAAATGATAGACATAATTTATGGATATTGAAGCCTTGGAATCTTGGTCGAGGTGTGGGGATTGTGATTACTGACAATTTGGATAGGA]

[+] EMBL CD167033             [AATCAGGTCTAAGGGAATTAGAAGTTCTTAAAAAACTCAACGATGCTGACCCGCAAGATCGTTTTCATTGCCTGCGACTTTATATTAATCAGTTCCCTGGTGAGTACGTCTTCACCGTTAAGGATTATCTAGCTAGTTTAGCAGCAAGTTTAGCTAAAGAAACTTATATGCAACAATCTAACGATCTAATGTATGATAATATTGATGCAAAACTTTCAACCAATTGGTATCCAGTTACATTTAACTTAGTGTATGAACTTCCACAATTTTGTGCTTATTTCCAATCGAATTATAATAAAATCATTAGTACTAATGAAGAACCTGGAAGAAATGATAGACATAATTTATGGATATTGAAGCCTTGGAATCTTGGTCGAGGTGTGGGGATTGTGATTACTGACAATTTGGATAGGA]
[+] EMBL CD119364             [                                                                                                                                                accGTCTAGCTAAAGAAACTTATATGCAACAATCTAACGATCTAATGTATGATAATATTGATGCAAAACTTTCAACCAATTGGTATCCAGTTACATTTAACTTAGTGTATGAACTTCCACAATTTTGCGCTTATTTCCAATCGAATTATAATAAAATCATTAGTACTAATGAAGAACCTG                                                                                          ]




>consensus_10198#3
AATCAGGTCTAAGGGAATTAGAAGTTCTTAAAAAACTCAACGATGCTGACCCGCAAGATC
GTTTTCATTGCCTGCGACTTTATATTAATCAGTTCCCTGGTGAGTACGTCTTCACCGTTA
AGGATTATCTAGCTAGTTTAGCAGCAAGTTTAGCTAAAGAAACTTATATGCAACAATCTA
ACGATCTAATGTATGATAATATTGATGCAAAACTTTCAACCAATTGGTATCCAGTTACAT
TTAACTTAGTGTATGAACTTCCACAATTTTGTGCTTATTTCCAATCGAATTATAATAAAA
TCATTAGTACTAATGAAGAACCTGGAAGAAATGATAGACATAATTTATGGATATTGAAGC
CTTGGAATCTTGGTCGAGGTGTGGGGATTGTGATTACTGACAATTTGGATAGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10198#2      ------------------------------------------------------------
consensus_10198#3      ------------------------------------------------------------
consensus_10198#0      GAGGTGGACTTTTGATGTGCAATCTATGAAACAGTGCTTACTTCAATATCCTAGTCTCTT 60
consensus_10198#1      ------------------------------------------------------------
                                                                                   

consensus_10198#2      ------------------------------------------------------------
consensus_10198#3      ------------------------------------------------------------
consensus_10198#0      AGAACGAATGGCTTCATTAATGAATATAAATACTTTAAATGAACCAAATGAGGATATCGC 120
consensus_10198#1      ------------------------------------------------------------
                                                                                   

consensus_10198#2      ------------------------------------------------------------
consensus_10198#3      ------------------------------------------------------------
consensus_10198#0      TTCAGATATTTGTAAAAATGTATGGAAATATTGTAGATATTATA-AATTATCAACACAGG 179
consensus_10198#1      ----------------------TAAAGAATTCATCAA-ATTACACGATGATCAAC-TAAG 36
                                                                                   

consensus_10198#2      ------------------------------------------------------------
consensus_10198#3      ------------------------------------------------------------
consensus_10198#0      AGAATATGTCATTGTTATCACAAGT--ACCTGAGTTACAACAAACAATGTGGTATGTATT 237
consensus_10198#1      AGCAAGTGGAATTCCTAGTCTATTTTGGCGTAGACTACANCGAAAAACTTT-TACATGAG 95
                                                                                   

consensus_10198#2      ------------------------------------------------TGTTACTAGGAT 12
consensus_10198#3      ------------------------------------------------------------
consensus_10198#0      GGATGAAGTTGGATCACGT-ATTCAACATTCTGATGAGCCTACAGGTATTTACATATATA 296
consensus_10198#1      GTGTTGTATTTGATTTTGTTACTTTGCATAATATT--TTTTACAGATATATG-------A 146
                                                                                   

consensus_10198#2      GAATATTTTACATCTCATCGAGTACAAGAAAAATTACCAATATGTCAA--ATCAATGAAC 70
consensus_10198#3      ------------------------------------------------------------
consensus_10198#0      TATGAGCGTGACTACTATTATGTAA--ATTTAAATTGGTAAATTTCTACCAGGCATTTAT 354
consensus_10198#1      TGCTAACACAAGTGTTATGATGCAACAAATCGAATATACAAATGACGA--AGGTGATGAT 204
                                                                                   

consensus_10198#2      CAATTAAACGGGAATATTTTACTGTTTATACTGATTTGAATCAAGTCAAACAATATTTAA 130
consensus_10198#3      ------------------------------------------------------------
consensus_10198#0      AAGATAAACAAACAACGTCAACTGTTTAAAGAAACTTTTTCTCAACAATTTTCACTCAAG 414
consensus_10198#1      AATG-AAATTGGAAGCG--AAGAGTTGACTG----TTAATCGTGACTGGAATATCTTAG- 256
                                                                                   

consensus_10198#2      CTCATTCACAATTTACTTTTGTTGATTCACCAGATAAAGCTGATATTATCTGGA-TGTAT 189
consensus_10198#3      -------------------------------AATCAGGTCTAAGGGAATTAGAAGTTCTT 29
consensus_10198#0      GTTCTATAGTTATTAAGTCTGTATATTTTCAGAATGATACCAAGCGTATGTATA--TATT 472
consensus_10198#1      --TTTGTAGTGATCAACTTT---TAGTGTCAGA-TAGTAATAA-TATATTTCT---CGTT 306
                                                                 *    **          *

consensus_10198#2      ACACATTTCAAGGATTTTGAACGATTA---TCTATAGACAGTCCAAATACGTATATTAAT 246
consensus_10198#3      AAAAAACTCAACGATGCTGACCCGCAAGATCGTTTTCATTGCCTGCGACTTTATATTAAT 89
consensus_10198#0      CGGTGTTTGGAGGTTGTCAGCGGGGAA--CTCTGGACTTGGTTTTCGTGCTGTTCGATAC 530
consensus_10198#1      GACCATGCGTGGACTTTTGATGTGCAA--TCTATGAAACAGTGCT--TACTTCAATATCC 362
                                     *           *             *                   

consensus_10198#2      CAGTTCCCTGGTGAGTACGTCTTCACC--GTTAAGGATTA-----TCTAGCTAGTTTAGC 299
consensus_10198#3      CAGTTCCCTGGTGAGTACGTCTTCACC--GTTAAGGATTA-----TCTAGCTAGTTTAGC 142
consensus_10198#0      TCATAAACAAGCTCGTATGGTACCATTTTACTATGTACCACGTAACTTATGTTACTCTGT 590
consensus_10198#1      TAGTCTCTTAGAACGAATGGCTTCATT--AATGAATATAA-ATACTTTAAATGAACCAAA 419
                          *      *   * * *    **      *    *  *       **  *        

consensus_10198#2      AGCAAGTTTAGCTAAAGAAACTTATATGCA--ACAATCTAACGATCTAATGTATGATAAT 357
consensus_10198#3      AGCAAGTTTAGCTAAAGAAACTTATATGCA--ACAATCTAACGATCTAATGTATGATAAT 200
consensus_10198#0      GTTCTGGCCCATTANAGATTTACANAGAAATGATAGTATCACAACTGACTATGTAGAACA 650
consensus_10198#1      TGAGGATATCGCTTCAGATATTTGTAAAAATGAGAATATGTCA--TTGTTATCACAAGTA 477
                                   *  ***       *   *  * * * *  *       * *        

consensus_10198#2      ATTGATGCAAAACTTTCAACCAAT-TGGTATCCAGTTACATTTAACTTAGTGTACGAACT 416
consensus_10198#3      ATTGATGCAAAACTTTCAACCAAT-TGGTATCCAGTTACATTTAACTTAGTGTATGAACT 259
consensus_10198#0      TGTAAAAAATCCTGAATTACGACCCTATTATTTATTACCTTGGGAATCAGAAGATTTTTC 710
consensus_10198#1      CCTGAGTTACAACAAACAATG----TGGTATGTATTGGAT--GAAGTTGGATCACGTATT 531
                         * *   *         *      *  ***  * *        * *  *   *      

consensus_10198#2      TCCACAATTT--TGTGCTTATTTCCAATCGAA-TTATAATAAAAT--CATTAGTACTAAT 471
consensus_10198#3      TCCACAATTT--TGTGCTTATTTCCAATCGAA-TTATAATAAAAT--CATTAGTACTAAT 314
consensus_10198#0      TATTGAACCTATTGAACATACATACATTTTGACAGATGAATATTTTACATCTCATCGAGT 770
consensus_10198#1      CAAC-ATTCTGATGAGCCTACAGGCATTTATA-AGATAAACAAACAACGTCA-ACTGTTT 588
                            *   *  **  * **    ** *   *   ** *  *     * *         *

consensus_10198#2      GAAGAACCTGGAAGAAATGATAGACATAATTTATGGATATTGA-AGCCTTGGAATCTTGG 530
consensus_10198#3      GAAGAACCTGGAAGAAATGATAGACATAATTTATGGATATTGA-AGCCTTGGAATCTTGG 373
consensus_10198#0      ACANAAAAAATTACCCATTTGTCAAATCAATGACCCATT-TAACGGGGATAATTTTATTG 829
consensus_10198#1      AAAGAAACTTTTTCTCAACAATT--TTCACTCAAGAATGATACCAAGCGTATGTATATAT 646
                         * **          *         * * * *   **  *        *       *  

consensus_10198#2      TCGAGGTGTGGGGATTGTGATTACTGACAATTTGGATAGGATAATAAAAACTTGTGATGG 590
consensus_10198#3      TCGAGGTGTGGGGATTGTGATTACTGACAATTTGGATAGGA------------------- 414
consensus_10198#0      TTAATACTGGATTGGAACAAGTCC-AACAATATTAACTCATTCCCAATTACTTTTGTGAA 888
consensus_10198#1      TCGGTGTTTGGAGGTTGTCAGCGG-GGAACTCTGGACTTGGTTTTCGTGCTGTTCGATAC 705
                       *        *         *        * * *  *                        

consensus_10198#2      TAACCCAATGATCGCTAGTACAA--------------------- 613
consensus_10198#3      --------------------------------------------
consensus_10198#0      TCCCAGAAAAGCTTGAATTATTGAATGGTACCCTTTTC------ 926
consensus_10198#1      TCATAAACAAGCTCGTATGGTACCATTTTACTATGTACCACGTA 749