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Schistosoma mansoni
cluster # 10205 cluster # 10205       Sequences # 14       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10205#0 length = 1120 sequences # 10  
consensus_10205#1 length = 616 sequences # 1  
consensus_10205#2 length = 576 sequences # 1  
consensus_10205#3 length = 508 sequences # 2  

consensusID : consensus_10205#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1120
fasta sequence
                              [CGTTACTCTCTTGGTAGTCGCGCATGTCTGAACTTCACTTCAAAATTCTTGTCCCTAATGTTGCTGCTGGGGCGATCATTGGAAAAAAAGGAGAAGCTATCGAAACAATCAAGCGTCAAACTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAACCACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTCAAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTTGTTATACAAATTGCTCTTATTCTCAAGTCAGGGAACCAGTGGCCAGTGCATTTTCAATAGGTTCTCCATTTGCAATTACGTACCACCCTCCAGTAGATATGAATTACTCAAATATAAATTCGGAGTGCAAGTCAAACATTTCAGCCTCAAGTCTTCCTGATGCAAGTCCAACAACTTTAACCTTCGGACACGAGTCCAATACCAATAAAATCGATCCCCTTCTTTGTAATCAGTCTTTATCGATGCCACTTGCAAATGCCAATCTTGATTCAAGTAAGTATTTCTATTCTCAGTCATTTATCGCTGACAGCAATAAGTAATATGTGATATCGTCCTGGATTCCACTGCTAGCCACCATCCGTCTTTGCTCATAATATTTGTTTCTGTTGTTCGATAGTAACTAAATTGCAGTTTTAAACGACAAACTAGCAACTAGCCCATGGATTTTGAAAATGCTTGGTTTCCTGTCAAATATTACTCACATTGCATGTTTTGTTTACAATTTTAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCCTTGAGAATCGCTGATTCCAC]

[+] EMBL CD185754             [CGTTACTCTCTTGGTAGTCGCGCATGTCTGAACTTCACTTCAAAATTCTTGTCCCTAATGTTGCTGCTGGGGCGATCATTGGAAAAAAAGGAGAAGCTATCGAAACAATCAAGCGTCAAACTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAACCACTGAAAGAGTTTGTCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD129323             [                                                                                                     GAAACAATCAAGCGTCAAACTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAACCACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTCAAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTTGTTATACAAATTGCTCTTATTCTCAAGTCAGGGAACCAGTGGCCAGTGCATTTTCAATAGGTTCTCCATTTGCAATTACGTACCACCCTCCAGTAGATATGAATTACTCAAATATAAATTCGGAGTGCAAGTCAAACATTTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD129279             [                                                                                                     GAAACAATCAAGCGTCAAACTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAACCACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTCAAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTTGTTATACAAATTGCTCTTATTCTCAAGTCAGGGAACCAGTGGCCAGTGCATTTTCAATAGGTTCTCCATTTGCAATTACGTACCACCCTCCAGTAGATATGAATTACTCAAATATAAATTCGGAGTGCAAGTCAAACATTTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD129527             [                                                                                                      AAACAATCAAGCGTCAAACTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAACCACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACTTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTCAAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD188625             [                                                                                                                                    TGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAACCACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGGACGTCATAAGCAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTCAAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD187579             [                                                                                                                                                                                        TCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTCAAAGGCCCAAAGATATAAGATTGTTTGAACGCTACATTGTAATAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTTGTTATACAAATTGCTCTTATTCTCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD186896             [                                                                                                                                                                                        TCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTCAAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTTGTTATACAAATTGCTCTTATTCTCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD187225             [                                                                                                                                                                                        TCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTGTCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTCAAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTTGTTATACAAATTGCTCTTATTCTCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD190945             [                                                                                                                                                                                                                                                                                                               GTCATAAGCAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTCAAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTTAAAAGAGAGGAGAAAGGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTTGTTATACAAATTGCTCTTATTCTCAAGTCAGGGAACCAGTGGCCAGTGCATTTTCAATAGGTTCTCCATTTGCAATTACGTACCACCCTCCAGTAGATATGAATTACTCAAATATAAATTCGGAGTGCAAGTCAAACATTTCAGCCTCAAGTCTTCCTGATGCAAGTCCAACAACTTTAACCTTCGGACACGAGTCCAATACCAATAAAATCGATCCCCTTCTTTGTAATCA                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD129378             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGAGAATCCTGATTCAGCTTGTTATACAAATTGCTCTTATTCTCAAGTCAGGGAACCAGTGGCCAGTGCATTTTCAATAGGTTCTCCATTTGCAATTACGTACCACCCTCCAGTAGATATGAATTACTCAAATATAAATTCGGAGTGCAAGTCAAACATTTCAGCCTCAAATCTTCCTGATGCAAGTCCAACAACTTTAACCTTCGGACACGAGTCCAATACCAATAAAATCGATCCCCTTCTTTGTAATCAGTCTTTATCGATGCCACTTGCAAATGCCAATCTTGATTCAAGTAAGTATTTCTATTCTCAGTCATTTATCGCTGACAGCAATAAGTAATATGTGATATCGTCCTGGATTCCACTGCTAGCCACCATCCGTCTTTGCTCATAATATTTGTTTCTGTTGTTCGATAGTAACTAAATTGCAGTTTTAAACGACAAACTAGCAACTAGCCCATGGATTTTGAAAATGCTTGGTTTCCTGTCAAATATTACTCACATTGCATGTTTTGTTTACAATTTTAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCCTTGAGAATCGCTGATTCCAC]


>consensus_10205#0 CGTTACTCTCTTGGTAGTCGCGCATGTCTGAACTTCACTTCAAAATTCTTGTCCCTAATG TTGCTGCTGGGGCGATCATTGGAAAAAAAGGAGAAGCTATCGAAACAATCAAGCGTCAAA CTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAACCACTGAAAGAG TGTGTCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCA AAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGG AACGTCATAAGCAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAA AGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTC AAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTTAAAAG AGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTT GTTATACAAATTGCTCTTATTCTCAAGTCAGGGAACCAGTGGCCAGTGCATTTTCAATAG GTTCTCCATTTGCAATTACGTACCACCCTCCAGTAGATATGAATTACTCAAATATAAATT CGGAGTGCAAGTCAAACATTTCAGCCTCAAGTCTTCCTGATGCAAGTCCAACAACTTTAA CCTTCGGACACGAGTCCAATACCAATAAAATCGATCCCCTTCTTTGTAATCAGTCTTTAT CGATGCCACTTGCAAATGCCAATCTTGATTCAAGTAAGTATTTCTATTCTCAGTCATTTA TCGCTGACAGCAATAAGTAATATGTGATATCGTCCTGGATTCCACTGCTAGCCACCATCC GTCTTTGCTCATAATATTTGTTTCTGTTGTTCGATAGTAACTAAATTGCAGTTTTAAACG ACAAACTAGCAACTAGCCCATGGATTTTGAAAATGCTTGGTTTCCTGTCAAATATTACTC ACATTGCATGTTTTGTTTACAATTTTAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAA ATGATATTGTATAAAATCCCTTGAGAATCGCTGATTCCAC



consensusID : consensus_10205#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 616
fasta sequence
                              [TTTTGCGTTACTCTCTTGGTAGTCGCGCATGTCTGAACTTCACTTCAAAATTCTTGTCCCTAATGTTGCTGCTGGGGCGATCATTGGAAAAAAAAGGAGAAGCTATCGAAACAATCAAGCGTCAAACTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAACCACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGGCAAGTTGCCTCTAACTACTTAGCTTTTGATACTGAAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTCTCATTCAAGTTTCTCANAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTANTAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTTGTTATACAAATTGCTCTTATTNCTCAGTCAGG]

[+] EMBL CD188660             [TTTTGCGTTACTCTCTTGGTAGTCGCGCATGTCTGAACTTCACTTCAAAATTCTTGTCCCTAATGTTGCTGCTGGGGCGATCATTGGAAAAAAAAGGAGAAGCTATCGAAACAATCAAGCGTCAAACTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAACCACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGGCAAGTTGCCTCTAACTACTTAGCTTTTGATACTGAAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTCTCATTCAAGTTTCTCANAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTANTAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTTGTTATACAAATTGCTCTTATTNCTCAGTCAGG]


>consensus_10205#1 TTTTGCGTTACTCTCTTGGTAGTCGCGCATGTCTGAACTTCACTTCAAAATTCTTGTCCC TAATGTTGCTGCTGGGGCGATCATTGGAAAAAAAAGGAGAAGCTATCGAAACAATCAAGC GTCAAACTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAACCACTG AAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGA TGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATT GCATGGAACGTCATAAGCAGGCAAGTTGCCTCTAACTACTTAGCTTTTGATACTGAAGGT TAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTAT TGAAAGAATTAAGGAAGAAAGCAATGCTCTCATTCAAGTTTCTCANAGGCCCAAAGATAT AAGATTGTTTGAACGCTGCATTGTANTAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGT AGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTTGTTATACAAATTGCTC TTATTNCTCAGTCAGG



consensusID : consensus_10205#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 576
fasta sequence
                              [CTATCGAAACAATCAAGCGTCAAACTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAACCACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTCAAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTTGTTATACAAATTGCTCTTATTCTCAAGTCAGGGAACCAGTGGCCAGTGCATTTTCAATAGGTTCTCCATTTGCAATTACGTACCACCCTCCAGTAGATATGAATTACTCAAATATAAATTCGGAGTGCAAGTCAAACATTTCAGC]

[-] EMBL CD129454             [CTATCGAAACAATCAAGCGTCAAACTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAACCACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCATACAGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAACTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGTTCCGGACAGTACAGCTGGTATTATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTCAAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCCTGATTCAGCTTGTTATACAAATTGCTCTTATTCTCAAGTCAGGGAACCAGTGGCCAGTGCATTTTCAATAGGTTCTCCATTTGCAATTACGTACCACCCTCCAGTAGATATGAATTACTCAAATATAAATTCGGAGTGCAAGTCAAACATTTCAGC]


>consensus_10205#2 CTATCGAAACAATCAAGCGTCAAACTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACT TTTATCCGGGAACCACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCATAC AGTTACACGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGCTATAATAA CTCCAACGGGAGTTAATTGCATGGAACGTCATAAGCAGTTCCGGACAGTACAGCTGGTAT TATCATTGGAAAGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCAT TCAAGTTTCTCAAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGG CGAGTTAAAAGAGAGGAGAAAAGCAGTAGAAATGATATTGTATAAAATCCTTGAGAATCC TGATTCAGCTTGTTATACAAATTGCTCTTATTCTCAAGTCAGGGAACCAGTGGCCAGTGC ATTTTCAATAGGTTCTCCATTTGCAATTACGTACCACCCTCCAGTAGATATGAATTACTC AAATATAAATTCGGAGTGCAAGTCAAACATTTCAGC



consensusID : consensus_10205#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 508
fasta sequence
                              [AAGTCAAACATTTCAGCCTCAAATCTTCCTGATGCAAGTCCAACAACTTTAACCTTCGGACACGAGTCCAATACCAATAAAATCGATCCCCTTCTTTGTAATCAGTCTTTATCAATGCCACTTGCAAATGCCAATCTTGATTCAATAATTCCTGTTATTCCTTGGATCGATCAAAGTTTTGTATATAGAAGCGCTAATGCAGTTGTCAATTTGACATCATGTGACACTGTTTCTCAACCGTTAGTGGCCCAATCGAATTTAACTAATCAGTCAGAACCTGTTCATTCTGACTTGGGTTTAAACCAAGTCTTTTGTGTCGGACATCCTTCTGCTTGCTGTCCAAGTTTTATGCCACAAACGTATGGTATTCAAAACTATATTCCACAGTCATTGATGAAAGTAAATGGAAAGATCTCTGTAGCGCCGACATTAGCACCTATAACGCAAACCACTGTTGAAATCACTCCTTTGAGTGACCTTTATTACTTTATACCAGGTGGTCAACAGG]

[+] EMBL CD178927             [AAGTCAAACATTTCAGCCTCAAATCTTCCTGATGCAAGTCCAACAACTTTAACCTTCGGACACGAGTCCAATACCAATAAAATCGATCCCCTTCTTTGTAATCAGTCTTTATCAATGCCACTTGCAAATGCCAATCTTGATTCAATAATTCCTGTTATTCCTTGGATCGATCAAAGTTTTGTATATAGAAGCGCTAATGCAGTTGTCAATTTGACATCATGTGACACTGTTTCTCAACCGTTAGTGGCCCAATCGAATTTAACTAATCAGTCAGAACCTGTTCATTCTGACTTGGGTTTAAACCAAGTCTTTTGTGTCGGACATCCTTCTGCTTGCTGTCCAAGTTTTATGCCACAAACGTATGGTATTCAAAACTATATTCCACAGTCATTGATGAAAGTAAATGGAAAGATCTCTGTAGCGCCGACATTAGCACCTATAACGCAAACCACTGTTGAAATCACTCCTTTGAGTGACCTTTATTACTTTATACCAGGTGGTCAACAGG]
[+] EMBL CD190172             [                                                                   CCAATACCAATAAAATCGATCCCCTTCTTTGTAATCAGTCTTTATCAATGCCACTTGCAAATGCCAATCTTGATTCAATAATTCCTGTTATTCCTTGGATCGATCAAAGTTTTGTATATAGAAGCGCTAATGCAGTTGTCAATTTGACATCATGTGACACTGTTTCTCAACCGTTAGTGGCCCAATCGAATTTAACTAATCAGTCAGAACCTGTTCATTCTGACTTGGGTTTAAACCAAGTCTTTTGTGTCGGACATCCTTCTGCTTGCTGTCCAAGTTTTATGCCACAAACGTATGGTATTCAAAACTATATTCCACAGTCATTGATGAAAGTAAATGGAAAGATCTCTGTAGCGCCGACATTAGCACCTATAACGCAAACCACTGTTGAAATCACTCCTTTGAGTGACCTTTA                          ]


>consensus_10205#3 AAGTCAAACATTTCAGCCTCAAATCTTCCTGATGCAAGTCCAACAACTTTAACCTTCGGA CACGAGTCCAATACCAATAAAATCGATCCCCTTCTTTGTAATCAGTCTTTATCAATGCCA CTTGCAAATGCCAATCTTGATTCAATAATTCCTGTTATTCCTTGGATCGATCAAAGTTTT GTATATAGAAGCGCTAATGCAGTTGTCAATTTGACATCATGTGACACTGTTTCTCAACCG TTAGTGGCCCAATCGAATTTAACTAATCAGTCAGAACCTGTTCATTCTGACTTGGGTTTA AACCAAGTCTTTTGTGTCGGACATCCTTCTGCTTGCTGTCCAAGTTTTATGCCACAAACG TATGGTATTCAAAACTATATTCCACAGTCATTGATGAAAGTAAATGGAAAGATCTCTGTA GCGCCGACATTAGCACCTATAACGCAAACCACTGTTGAAATCACTCCTTTGAGTGACCTT TATTACTTTATACCAGGTGGTCAACAGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10205#1      TTTTGCGTTACTCTCTTGGTAGTCGCGCATGTCTGAACTTCACTTCAAAATTCTTGTCCC 60
consensus_10205#2      ------------------------------------------------------------
consensus_10205#0      -----CGTTACTCTCTTGGTAGTCGCGCATGTCTGAACTTCACTTCAAAATTCTTGTCCC 55
consensus_10205#3      ------------------------------------------------------------
                                                                                   

consensus_10205#1      TAATGTTGCTGCTGGGGCGATCATTGGAAAAAAAAGGAGAAGCTATCGAAACAATCAAGC 120
consensus_10205#2      ------------------------------------------CTATCGAAACAATCAAGC 18
consensus_10205#0      TAATGTTGCTGCTGGGGCGATCATTGGAAAAAAA-GGAGAAGCTATCGAAACAATCAAGC 114
consensus_10205#3      -------------------------------------------AAGTCAAACATTTCAGC 17
                                                                   *   ***** *  ***

consensus_10205#1      GTCAAA-----CTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAAC 175
consensus_10205#2      GTCAAA-----CTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAAC 73
consensus_10205#0      GTCAAA-----CTGGAGCAAGGCTGAAAATGTCTCGAGCAGATGACTTTTATCCGGGAAC 169
consensus_10205#3      CTCAAATCTTCCTGATGCAAGTCCAACAAC--TTTAACCTTCGGACACGAGTCCAATACC 75
                        *****     ***  ***** *  * **    *  * *    ***     ***   * *

consensus_10205#1      CACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCA---TACAGTTACA--- 229
consensus_10205#2      CACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCA---TACAGTTACA--- 127
consensus_10205#0      CACTGAAAGAGTGTGTCTCATTATTGGTACACTTGAAGCATGCA---TACAGTTACA--- 223
consensus_10205#3      AATAAAATCGATCCCCTTCTTTGTAATCAGTCTTTATCAATGCCACTTGCAAATGCCAAT 135
                        *   **    *     ** ** *    *  *** *   ****    * **  * *    

consensus_10205#1      --CGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGC-TATAATAACTCC 286
consensus_10205#2      --CGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGC-TATAATAACTCC 184
consensus_10205#0      --CGATTATGTGATGGCCAAAATAAGCAAACGACCTCAGAATATAGC-TATAATAACTCC 280
consensus_10205#3      CTTGATTCAATAATTCCTGTTATTCCTTGGATCGATCAAAGTTTTGTATATAGAAGCGCT 195
                          ****   * **  *    **            *** * * * *  ****  * * * 

consensus_10205#1      AACGGGA--GTTAATTGCATGGAACGTCATAAGCAGGCAAGTTGCCTCTAACTACTTAGC 344
consensus_10205#2      AACGGGA--GTTAATTGCATGGAACGTCATAAGCAG------------------------ 218
consensus_10205#0      AACGGGA--GTTAATTGCATGGAACGTCATAAGCAGG----------------------- 315
consensus_10205#3      AATGCAGTTGTCAATTTGACATCATGTGACA--CTGTT---------------------- 231
                       ** *     ** ****  *    * ** * *  * *                        

consensus_10205#1      TTTTGATACTGAAGGTTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAA 404
consensus_10205#2      ---------------------------TTCCGGACAGTACAGCTGGTATTATCATTGGAA 251
consensus_10205#0      ---------------TTAAAATTTTAGTTCCGGACAGTACAGCTGGTATTATCATTGGAA 360
consensus_10205#3      ---------------------TCTCAACCGTTAGTGGCCCAATCGAATTTA--ACTAATC 268
                                                           *  **   *   ***  * *    

consensus_10205#1      AGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTCTCATTCAAGTTTCTC 464
consensus_10205#2      AGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTC 311
consensus_10205#0      AGTTCGGGAACTTTATTGAAAGAATTAAGGAAGAAAGCAATGCTTTCATTCAAGTTTCTC 420
consensus_10205#3      AGTC--AGAACCTGTTCATTCTGACTTGGGTTTAAACCAAGTCTTTTGTGTCGGACATCC 326
                       ***    **** *  *       * *  **   *** ***  ** *  *    *     *

consensus_10205#1      ANAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTANTAACAGGCGAGTT--AAA 522
consensus_10205#2      AAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTT--AAA 369
consensus_10205#0      AAAGGCCCAAAGATATAAGATTGTTTGAACGCTGCATTGTAATAACAGGCGAGTT--AAA 478
consensus_10205#3      TTCTGCTTGCTGTCCAAGTTTTATGCCACAAACGTATGGTATTCAAAACTATATTCCACA 386
                           **     *    *   ** *   *     * ** *** * * *      **  * *

consensus_10205#1      AGAGAGGAGAAAAGCAGTAGAAATGATAT-TGTATAAAATCCTTGAGAATCC-TGATTCA 580
consensus_10205#2      AGAGAGGAGAAAAGCAGTAGAAATGATAT-TGTATAAAATCCTTGAGAATCC-TGATTCA 427
consensus_10205#0      AGAGAGGAGAAAAGCAGTAGAAATGATAT-TGTATAAAATCCTTGAGAATCC-TGATTCA 536
consensus_10205#3      GTCATTGATGAAAGTAAATGGAAAGATCTCTGTAGCGCCGACATTAGCACCTATAACGCA 446
                             **  **** *   * ** *** * ****       * * ** * *  * *  **

consensus_10205#1      GCTTGTTATACAAATTGCTCTTATTNCTCAGTCAGG------------------------ 616
consensus_10205#2      GCTTGTTATACAAATTGCTCTTATTCTCAAGTCAGGGAACCAGTGGCCAGTGCATTTTCA 487
consensus_10205#0      GCTTGTTATACAAATTGCTCTTATTCTCAAGTCAGGGAACCAGTGGCCAGTGCATTTTCA 596
consensus_10205#3      AACCACTGTTGAAATCACTCCTTTGAGTGACCTTTATTACTTTATACCAG---GTGGTCA 503
                             * *  ****  *** * *     *                              

consensus_10205#1      ------------------------------------------------------------
consensus_10205#2      ATAGGTTCTCCATTTGCAATTACGTACCACCCTCCAGTAGATATGAATTACTCAAATATA 547
consensus_10205#0      ATAGGTTCTCCATTTGCAATTACGTACCACCCTCCAGTAGATATGAATTACTCAAATATA 656
consensus_10205#3      ACAGG------------------------------------------------------- 508
                                                                                   

consensus_10205#1      ------------------------------------------------------------
consensus_10205#2      AATTCGGAGTGCAAGTCAAACATTTCAGC------------------------------- 576
consensus_10205#0      AATTCGGAGTGCAAGTCAAACATTTCAGCCTCAAGTCTTCCTGATGCAAGTCCAACAACT 716
consensus_10205#3      ------------------------------------------------------------
                                                                                   

consensus_10205#1      ------------------------------------------------------------
consensus_10205#2      ------------------------------------------------------------
consensus_10205#0      TTAACCTTCGGACACGAGTCCAATACCAATAAAATCGATCCCCTTCTTTGTAATCAGTCT 776
consensus_10205#3      ------------------------------------------------------------
                                                                                   

consensus_10205#1      ------------------------------------------------------------
consensus_10205#2      ------------------------------------------------------------
consensus_10205#0      TTATCGATGCCACTTGCAAATGCCAATCTTGATTCAAGTAAGTATTTCTATTCTCAGTCA 836
consensus_10205#3      ------------------------------------------------------------
                                                                                   

consensus_10205#1      ------------------------------------------------------------
consensus_10205#2      ------------------------------------------------------------
consensus_10205#0      TTTATCGCTGACAGCAATAAGTAATATGTGATATCGTCCTGGATTCCACTGCTAGCCACC 896
consensus_10205#3      ------------------------------------------------------------
                                                                                   

consensus_10205#1      ------------------------------------------------------------
consensus_10205#2      ------------------------------------------------------------
consensus_10205#0      ATCCGTCTTTGCTCATAATATTTGTTTCTGTTGTTCGATAGTAACTAAATTGCAGTTTTA 956
consensus_10205#3      ------------------------------------------------------------
                                                                                   

consensus_10205#1      ------------------------------------------------------------
consensus_10205#2      ------------------------------------------------------------
consensus_10205#0      AACGACAAACTAGCAACTAGCCCATGGATTTTGAAAATGCTTGGTTTCCTGTCAAATATT 1016
consensus_10205#3      ------------------------------------------------------------
                                                                                   

consensus_10205#1      ------------------------------------------------------------
consensus_10205#2      ------------------------------------------------------------
consensus_10205#0      ACTCACATTGCATGTTTTGTTTACAATTTTAGGCGAGTTAAAAGAGAGGAGAAAAGCAGT 1076
consensus_10205#3      ------------------------------------------------------------
                                                                                   

consensus_10205#1      --------------------------------------------
consensus_10205#2      --------------------------------------------
consensus_10205#0      AGAAATGATATTGTATAAAATCCCTTGAGAATCGCTGATTCCAC 1120
consensus_10205#3      --------------------------------------------
                                                                   




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)