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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10210#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1629 fasta sequence
[ATTTTTATTTATTATCCAATAATCTGGGAGCACTGGGTACAAATCAGAAAAATTTACTTACTATAATCACAAGATAATGATGATATTTCTTCAGAAATACAAATATAGTAATGAACAGAATGAAGAGTATGATTCGTTAAGAAAGAAAGAAAAATATGACAAAGTGTAGTAAGAACATTTAGAAGTTTCATAAATCAAGCCACGAACGAATTGTTTGTACCTCAATTTGACGAACTTGACGTGCTGATGGAGGGTCGTTTGGATCTGGTGATCTTAAATCAAGATGATGAGCTCCACCATCTAGTACCAAGGAGATGACTTTCTCTGATTGATCAGTTAAAATTCCACCACCCATCCATGGATCCAAATTTCCATTTGAAAATATAATATTACTTGAAGTTTTCCAAATATTATCACCATAAAATGTTGACAACTGATTAAACGCTGGTGTAACACCCCACCTTCGTTGACAATAACTTGTTACTTGTTGTTTTGTTAGAGGTAAAGAGACGAACATATCATTTTGTAGTACTATCCGAGTCATCGTGTAAATTTCATTTCGGTACAACTCTGAAAATCCCAAGCAAGTGAATCACTACCTAGACCACATCCTGTTATATCAGCACATTCAATAAACTGGGTTTTATAGTCGAAACACGGGAGAGATTGTGAACTGTTGTAGAAAACTCCAACAGCCTCACGAAGGGTCGGGATGAGATCAGTTACTGTTAATGCATTTTTGCACGAGACATTTACAGGATTAGCAGGTAGAC-TTGCCATAAATGATGCCTTGTAGGGATAATCTAACATAGCCATCATAACAAATGCATTGCGAGCCCATTTCAGTACCCAGTAAAATTCGAAATCATTTTGGATAGGTTTACATAACCGTAGGTCATTAGAGAGTTGTTTGTAACCGATATCAGGTTTCTGAGATAGTTGAACAGCTAAATTAAAGGCGTTTTTAA-TTTTTTCTGAACATTTTGGATCAGCATCACGATAGTCCTTAGTGACACTTTCAAAAAAGTCATGAAAATTCCCCTCGCCTGCAACCCATCTAACTGGTGCACTTGAAGCTAAAGCACCTTTAATTATATGAGGATATTTAGCTCTCATATACGCTGCAAGCATGCCTCCATAGCTTCCACCAAATGCAACAACAAGGGATCTAGTCATGTTGAATGTACTTTTGATACCTTCAATTAAATAAGCATAATCTGCTAATGCTTGGTCAATTGAAAGGTATTGAATATATGGCTGCTGGAAGCTTGTATTAAATGGGAGACTTTTCCCATAGTATCTATGTTCAGCAAACAGGACGAAAGCATTGAAACTAGGTGCTAATTCGAATATTAGCCCTGTATTGTTCCAGAAACCATCGATTCCTCCTTCGTTTCCACAATAAAAGAAGATGGGTCCGTTTGGTTTGAACCATTTATCTTCATACAGGTACCGCTGTTTGAAAGTCAGGTTTCTTGCTTGAAAATTAAAGTGATCCAAAGTTTGATCAAAATAGTTTTCTTTCGGTGGCCACGGTATGGATGACGATGAGACATATAAAGTGCAAACAAACAGGAAGAATTGCAAAACAGGGTTTTGATGAACCATGAACCCAAGAGCTGCCTCCAC]
[+] EMBL CD076909 [ATTTTTATTTATTATCCAATAATCTGGGAGCACTGGGTACAAATCAGAAAAATTTACTTACTATAATCACAAGATAATGATGATATTTCTTCAGAAATACAAATATAGTAATGAACAGAATGAAGAGTATGATTCGTTAAGAAAGAAAGAAAAATATGACAAAGTGTAGTAAGAACATTTAGAAGTTTCATAAATCAAGCCACGAACGAATTGTTTGTACCTCAATTTGACGAACTTGACGTGCTGATGGAGGGTCGTTTGGATCTGGTGATCTTAAATCAAGATGATGAGCTCCACCATCTAGTACCAAGGAGATGACTTTCTCTGATTGATCAGTTAAAATTCCACCACCCATCCATGGATCCAAA ]
[+] EMBL BF936826 [ AATAATCTGGGAGCACTGGGTACAAATCAGAAAAATTTACTTACTATAATCACAAGATAATGATGATATTTCTTCAGAAATACAAATATAGTAATGAACAGAATGAAGAGTATGATTCGTTAAGAAAGAAAGAAAAATATGACAAAGTGTAGTAAGAACATTTAGAAGTTTCATAAATCAAGCCACGAACGAATTGTTTGTACCTCAATTTGACGAACTTGACGTGCTGATGGAGGGTCGTTTGGATCTGGTGATCTTAAATCAAGATGATGAGCTCCACCATCTAGTACCAAGGAGATGACTTTCTCTGATTGATCAGTTAAAATTCCACCACCCATCCATGGATCCAAATTTCCATTTGAAAATATAATATTACTTGAAGTTTTCCAAATATTATCACCATAAAATGTTGACAACTGATTAAACGCTGGTGTAACACCCCACCTTCGTTGACAATAACTTGTTACTTGTTGTTTTGTTAGAGGTAAAGAGACGAACATATCATTTTGTAGTACTATCCGAGTCATCGTGTAAATTTCATTTCGGTACAACTCTGAAAATCCCAAGCAAGTGAATCACTACCTAGACCACATCCTGTTATATCAGCACATTCAATAAACTGGGTTTTATAGTCGAAACACGGGAGAGATTGTGAACTGTTGTAGAAAACTCCAACAGCCTCACGAAGGGTCGGGATGAGATCAGTTAC ]
[+] EMBL AI067561 [ TGGGAGCACTGGGTACAAATCACAAAAATTTACTTACTATAATCACAAGATAATGATGATATTTCTTCAGAAATACAAATATAGTAATGAACAGAATGAAGAGTATGATTCGTTAAGAAAGAAAGAAAAATATGACAAAGTGTAGTAAGAACATTTAGAAGTTTCATAAATCAAGCCACGAACGAATTGTTTGTACCTCAATTTGACGAACTTGACGTGCTGATGGAGGGTCGCTTGGATCTGGTGATCTTAAATCAAGATGATGAGCTCCACCATCTAGTACCAAGGAGATGACTTTCTCTGATTGATCAGTTAAAATTCCACCACCCATCCATGGATCCAAATTTCCATTTGAAAATATAATATTACTTGAAGTTTTCCAAATATTATCACCATAAAATGTTGACAACTGATTAAACGCTGGGGTAACACCCCACCTTCGTTGACAAT ]
[+] EMBL CD071567 [ GAAAAATTTACTTACTATAATCACAAGATAATGATGATTTTTCTTCAGAAATACAAATATAGTAATGAACAGAATGAAGAGTATGATTCGTTAAGAAAGAAAGAAAAATATGACAAAGTGTAGTAAGAACATTTAGAAGTTTCATAAATCAAGCCACGAACGAATTGTTTGTACCTCAATTTGACGAACTTGACGTGCTGATGGAGGGTCGTTTGGATCTGGTGATCTTAAATCAAGATGATGAGCTCCACCATCTAGTACCAAGGAGATGACTTTCTCTGATTGATCAGTTAAAATTCCACCACCCATCCATGGATCCAAATNTCCATTTGAAAATATAATATTACTTGAAGTTTTCCAAATATTATCACCATAAAATGT ]
[-] EMBL CD072712 [ AAAAATTTACTTACTATAATCACAAGATAATGATGATATTTCTTCAGAAATACAAATATAGTAATGAACAGAATGAAGAGTATGATTCGTTAAGAAAGAAAGAGAAATATGACAAAGTGTAGTAAGAACATTTAGAAGTTTCATAAATCAAGCCACGAACGAATTGTTTGTACCTCAATTTGACGAACTTGACGTGCTGATGGAGGGTCGTTTGGATCTGGTGATCTTAAATCAAGATGATGAGCTCCACCATCTAGTACCAAGGAGATGACTTTCTCTGATTGATCAGTTAAA ]
[-] EMBL SMRAP119 [ ACCACCCATCCATGGATCCAAATTTCCATTTGAAAATATAATATTACTTGAAGTTTTCCAAATATTATCACCATAAAA ]
[-] EMBL CD080101 [ AGTGAATCTCTACGTAGACCACATCCTGTTATATCAGCACATTCAATAAACTGGGTTTTATAGTCGAAACACGGGAGAGATTGTGAACTGTTGTAGAAAACTCCAACAGCCTCACGAAGGGTCGGGATGAGATCAGTTACTGTTAATGCATTTTTGCACGAGACATTTACAGGATTAGCAGGTAGAC TTGCCATAAATGATGCCTTGTAGGGATAATCTAACATAGCCATCATAACAAATGCATTGCGAGCCCATTTCAGTACCCAGTAAAATTCGAAATCATTTTGGATAGGTTTACATAACCGTAGGTCATTAGAGAGTTGTTTGTAACCGATATCAGGTTTCTGAGATAGTTGAACAGCTAAATTAAAGGCGTTTTTAA TTTTTTCTGAACATTTTGGATCAGCATCACGATAGTCCTTAGTGACACTTTCAAAAAAGTCATGAAAATTCCCCTCGCCTGCAACCCATCTAACTGGTGCACTTGAAGCTAAAGCACCTTTAATTATATGAGGATATTTAGCTCTCATATACGCTGCAAGCATGCCTCCATAGCTTCCACCAAATGCAACAACAAGGGATCTAGTCATGTTGAATGTACTTTTGATACCTTCAATTAAATAAGCATAATCTGC ]
[-] EMBL CD185731 [ GGATTAGCAGGTAGACTTTGCCATAAATGATGCCTTGTAGGGATAATCTAACATAGCCATCATAACAAATGCATTGCGAGCCCATTTCAGTACCCAGTAAAATTCGAAATCATTTTGGATAGGTTTACATAACCGTAGGTCATTAGAGAGTTGTTTGTAACCGATATCAGGTTTATGAGATAGTTGAACAGCTAAATTAAAGGCGTTTTTAA TTTTTTCTGAACATTTTGGATCAGCATCACGATAGTCCTTAGTGACACTTTCAAAAAAGTCATGAAAATTCCCCTCGCCTGCAACCCATCTAACTGGTGCACTTGAAGCTAAAGCACCTTTAATTATATGAGGATATTTAGCTCTCATATACGCTGC ]
[-] EMBL CD127251 [ GTAGGTCATTAGAGAGTTGTTTGTAACCGATATCAGGTTTCTGAGATAGTTGAACAGCTAAATTAAAGGCGTTTTTAATTTTTTTCTGAACATTTTGGATCAGCATCACGATAGTCCTTAGTGACACTTTCAAAAAAGTCATGAAAATTCCCCTCGCCTGCAACCCATATAACTGGTGCACTTGAAGCTAAAGCACCTTTAATTATATGAGGATATTTAGCTCTCATATACGCTGCAAGCATGCCTCCATAGCTTCCACCAAATGCAACAACAAGGGATCTAGTCATGTTGAATGTGCTTTTGATACCTTCAATTAAATAAGAATAATCTGCTAATGac ]
[+] EMBL CD127370 [ GTTGTTTGTAACCGATATCAGGTTTCTGAGATAGTTGAACAGCTAAATTAAAGGCGTTTTTAA TTTTTTCTGAACATTTTGGATCAGCATCACGATAGTCCTTAGTGACACTTTCAAAAAAGTCATGAAAATTCCCCTCGCCTGCAACCCATCTAACTGGTGCACTTGAAGCTAAAGCACCTTTAATTATATGAGGATATTTAGCTCTCATATACGCTGCAAGCATGCCTCCATAGCTTCCACCAAATGCAACAACAAGGGATCTAGTCATGTTGAATGTACTTTTGATACCTTCAATTAAATAAGCATAATCTGCTAATGCTTGGTCAATTGAAAGGTATTGAATATATGGCTGCTGGAAGCTTGTATTAAATGGGAGACTTTTCCCATAGTATCTATGTTCAGCAAACAGGACGAAAGCATTGAAACTAGGTGCTAATTCGAATATTAGCCCTGTATTGTTCCAGAAAC ]
[-] EMBL CD127319 [ TTGTTTGTAACCGATATCAGGTTTCTGAGATAGTTGAACAGCTAAATTAAAGGCG TTTTAA TTTTTTCTGAACATTTTGGATCAGCATCACGATAGTCCTTAGTGACACTTTCAAAAAAGTCATGAAAATTCCCCTCGCCTGCAACCCATCTAACTGGTGCACTTGAAGCTAAAGCACCTTTAATTATATGAGGATATTTAGCTCTCATATACGCTGCAAGCATGCCTCCATAGCTTCCACCAAATGCAACAACAAGGGATCTAGTCATGTTGAATGTACTTTTGATACCTTCAATTAAATAAGCATAATCTGCTAATGCTTGGTCAATTGAAAGGTATTGAATATATGGCTGCTGGAAGCTTGTATTAAATGGGAGACTTTTCCCATAGTATCTATGTTCAGCAAACAGGACGAAAGCATTGAAACTAGGTGCTAATTCGAATATTAGCCCTGTATTGTTCCAGAAACC ]
[-] EMBL CD061871 [ TTGAATGTACTTTTGATACCTTCAATTAAATAAGCATAATCTGCTAATGCTTGGTCAATTGAAAGGTATTGAATATATGGCTGCTGGAAGCTTGTATTAAATGGGAGACTTTTCCCATAGTATCTATGTTCAGCAAACAGGACGAAAGCATTGAAACTAGGTGCTAATTCGAATATTAGCCCTGTATTGTTCCAGAAACCATCGATTCCTCCTTCGTTTCCACAATAAAAGAAGATGGGTCCGTTTGGTTTGAACCATTTATCTTCATACAGGTACCGCTGTTTGAAGGTCAGGTTTCTTGCTTGAAAATTAAAGTGATCCAAAGTTTGATCAAAATAGTTTTCTTTCGGTGGC ]
[+] EMBL CD111409 [ GAATATTAGCCCTGTATTGTTCCAGAAACCATCGATTCCTCCTTCGTTTCCACAATAAAAGAGGATGGGTCCGTTTGGTTTGAACCATTTATCTTCATACAGGTACCGCTGTTTGAAAGTCAGGTTTCTTGCTTGAAAATTAAAGTGATCCAAAGTTTGATCAAAATAGTTTTCTTTCGGTGGCCACGGTATGGATGACGATGAGACATATAAAGTGCAAACAAACAGGAAGAATTGCAAAACAGGGTTTTGATGAACCATGAACCCAAGAGCTGCCTCCAC]
[+] EMBL CD062213 [ AAGAA ATGGGTCCGTTTGGTTTGAACCATTTATCTTCATACAGGTACCGCTGTTTGAAAGTCAGGTTTCTTGCTTGAAAATTAAAGTGATCCAAAGTTTGATCAAAATAGTTTTCTTTCGGTGGCCACGGTATGGATGACGATGAGACATATAAAGTGCAAACAAACAGGAAGAATTGCAAAAC ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||