| These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs : 
 consensusID : consensus_10230#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1281 fasta sequence 
                              [CGAGGCCAAAAATTGCGGCACGAGGTCCAATCAGCGTTTAAAAATGTAAATTTAGCCTTAAATTATATGACAAAAGGTGATTATCAACAGTCAGCTGACTATTCAATGAAAGCTGTTAATTTATTCGAAAGAATCTTATCGGGTAAGTCGTTCTCAGATGTAAAGAATTTGATTAATTCATCGTCTCAACTAGACGATCGAAATGGTGAAACAATTTCAAAACCAAATGACAATCCCGCCTCTGTTGAGTCTAATGAACATAATCAAAATGAAAATGAGTTGGATGACAAAGAAAGCAATAGCATCACCACAAATTCAAATAATACTGACACCCTCAATAAAAATAAAACAAATGAATCTATTCAAGTGTATATTAAAGAAGTATATAATCAAATTTCACTTTTACACGCTACTTATCAAGCATTAGCTGGACGTTCTGAAGAAGCAAAAGAACGTTTTCAAAATATTGGTATGGTAGACTCTGGAGCTTCATTAGTGGTTCGCGTTAATGCATTGATTAAATCTGCATGCTTATCAATGTCAGTTGATCAAGATGTAGCTGCTTGCCTTTATGATTTTCAACGTGCACAAAATGTTTGGCCTGAATGTCCGGATGTTTATCTTCATCGAGGACAAATTAATTTATTAGCTGACCAATTAGATGAAGCATTGCATGATTTGAATACAGCTGTTAAATTAAAGCCGGAATTTTCAGTTGCACAGGCTCAACGTTTGTACACCCTATATCGATGCGCATTAACTGCCGGTGATATTAGCAAAGTGGATTCTCGTATTGAAGAGTTTCGTCGATTAGTGAAGAAATACCCCAATTGTTTAGAAACTCATTCCTTATTTGCTCAGATCCTGTCTGAACGTGGTGATTTTAAAGAAAGTGATAAAATATTTGCTGATTTAATAACCTTAGCACCAGATTCTGGATTAGCCTATGCAC-ATCG-GGTTTATTACAATTAAAATGGAAACAAGATCGTGATGCAGCATTATGTTTTTTTATAGAAGGTATACAAAAAGATCCTAAATGTGAATTAATACATGAATTACTTGGTCAATTATCAGTAGAAAAGGGTCAATTTAATGAAGCATTAAAACATTTTGATATGGCAATAAAACAAGCTAAAACACAAAATGATTTATCACATTTAATAGCATTACGTGAAGGTGTTAATGCCCAATTAAAAGTATGTGAACAATATAAAATATCAATACCGGATGTATTATCAAGTATACAACATGAACAACAAAGATTCTTGATGGCTATGCAAG]
[+] EMBL CD081300             [CGAGGCCAAAAATTGCGGCACGAGGTCCAATCAGCGTTTAAAAATGTAAATTTAGCCTTAAATTATATGACAAAAGGTGATTATCAACAGTCAGCTGACTATTCAATGAAAGCTGTTAATTTATTCGAAAGAATCTTATCGGGTAAGTCGTTCTCAGATGTAAAGAATTTGATTAATTCATCGTCTCAACTAGACGATCGAAATGGTGAAACAATTTCAAAACCAAATGACAATCCCGCCTCTGTTGAGACTAATGAACATAATCAAAATGAAAATGAGTTGGATGACAAAGAAAGCAATAGCATCACCACAAATTCAAATAATACTGACACCCTCAATAAAAATAAAACAAATGAATCTATTCAAGTGTATATTAAAGAAGTATATAATCAAATTTCACTTTTACACGCTACTTATCAAGCATTAGCTGGACGTTCTGAAGAAGCAAAAGAACGTTTTCAAAATATTGGTATGGTAGACTCTGGAGCTTCATTAGTGGTTCGCGTTAATGCCTTGATTAAATCTGCATGCTTATCAATGTCAGTTGATCAAGATGTAGCTGCTTGCCTTTATGATTTTCAACGTGCACAAAATGTTTGGCCTGAATGTCCGGATGTTTATCTTCATCGAGGACAAATTAATTTATTAGCTGACCAATTAGATGAAGCATTGCATGATTTGAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD154057             [                      ctcttCAATCAGCGTTTAAAAATGTAAATTTAGCCTTAAATTATATGACAAAAGGTGATTATCAACAGTCAGCTGACTATTCAATGAAAGCTGTTAATTTATTCGAAAGAATCTTATCGGGTAAGTCGTTCTCAGATGTAAAGAATTTGATTAATTCATCGTCTCAACTAGACGATCGAAATGGTGAAACAATTTCAAAACCAAATGACAATCCCGCCTCTGTTGAGTCTAATGAACATAATCAAAATGAAAATGAGTTGGATGACAAAGAAAGCAATAGCATCACCACAAATTCAAATAATACTGACACCCTCAATAAAAATAAAACAAATGAATCTATTCAAGTGTATATTAAAGAAGTATATAATCAAATTTCACTTTTACACGCTACTTATCAAGCATTAGCTGGACGTTCTGAAGAAGCAAAAGAACGTTTTCAAAATATTGGTATGGTAGACTCTGGAGCTTCATTAGTGGTTCGCGTTAATGCATTGATTAAATCTGCATGCTTATCAATGTCAGTTGATCAAGATGTAGCTGCTTGCCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AI976318             [                                                                                                                                                            GATGTAAAGAATTTGATTAATTCATCGTCTCAACTAGACGATCGAAATGGTGAAACAATTTCAAAACCAAATGACAATCCCGCCTCTGTTGAGTCTAATGAACATAATCAAAATGAAAATGAGTTGGATGACAAAGAAAGCAATAGCATCACCACAAATTCAAATAATACTGACACCCTCAATAAAAATAAAACAAATGAATCTATTCAAGTGTATATTAAAGAAGTATATAATCAAATTTCACTTTTACACGCTACTTATCAAGCATTAGCTGGACGTTCTGAAGAAGCAAAAGAACGTTTTCAAAATATTGGTATGGTAGACTCTGGAGCTTCATTAGTGGTTCGCGTTAATGCATTGATTAAATCTGCATGCTTATCAATGTCAGTTGATCAAGATGTAGCTGCTTGCCTTTATGATTTTCAACGTGCACAAAATGTTTGGCCTGAATGTCCGGATGTTTATCTTCATCGAGGACAAATTAATTTATTAGCTGACCAATTAGATGAAGCATTGCATGATTTGAATACAGCTGTTAAATTAAAGCCGGAATTTTCAGTTGCACAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD158479             [                                                                                                                                                                                                                                                                                                             GCATCACCACAAATTCAAATAATACTGACACCCTCAATAAAAATAAAACAAATGAATCTATTCAAGTGTATATTAAAGAAGTATATAATCAAATTTCACTTTTACACGCTACTTATCAAGCATTAGCTGGACGTTCTGAAGAAGCAAAAGAACGTTTTCAAAATATTGGTATGGTAGACTCTGGAGCTTCATTAGTGGTTCGCGTTAATGCATTGATTAAATCTGCATGCTTATCAATGTCAGTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD066265             [                                                                                                                                                                                                                                                                                                                               ATAATACTGACACCCTCAATAAAAATAAAACAAATGAATCTATTCAAGTGTATATTAAAGAAGTATATAATCAAATTTCACTTTTACACGCTACTTATCAAGCATTAGCTGGACGTTCTGAAGAAGCAAAAGAACGTTTTCAAAATATTGGTATGGTAGACTCTGGAGCTTCATTAGTGGTTCGCGTTAATGCATTGATTAAATCTGCATGCTTATCAATGTCAGTTGATCAAGATGTAGCTGCTTGCCTTTAAGATTTTCAACGTGCACAAAATGTTTGGCCTGAATGTCCGGATGTTTATCTTCATCGAGGACAAATTAATTTATTAGCTGACCAATTAGATGAAGCATTGCATGATTTGAATACAGCTGTTAAATTAAAGCCGGAATTTTCAGTTGCACAGGCTCAACGTTTGTACACCCTATATCGATGCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD162139             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGAACGTTTTCAAAATATTGGTATGGTAGACTCTGGAGCTTCATTAGTGGTTCGCGTTAATGCATTGATTAAATCTGCATGCTTATCAATGTCAGTTGATCAAGATGTAGCTGCTTGCCTTTATGATTTTCAACGTGCACAAAATGTTTGGCCTGAATGTCCGGATGTTTATTTTCATCGAGGACAAATTAATTTATTAGCTGACCAATTAGATGAAGCATTGCATGATTTGAATACAGCTGTTAAATTAAAGCCGGAATTTTCAGTTGCACAGGCTCAACGTTTGTACACCCTATATCGATGCGCATTAACTGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD183167             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCGCGTTAATGCATTGATTAAATCTGCATGCNTATCAATGTCAGTTGATCAAGATGTAGCTGCTGNCCTTTATGATTTTCAACGTGCACAAAATGTTTGGCCTGAATGTCCGGATGTTTATCTTCATCGAGGACAAATTAATTTATTAGCTGNCCAATTAGATGAAGCATTGCATGATTTGAATACAGCTGTTAAATTAAAGCCGGAATTTTCAGTTGCACAGGCTCAACGTTTGTACACCCTATATCGATGCGCATTAACTGCCGGTGATATTAGCAAAATGGATTCTCGTATTGAAGAGTTTCGTCGATTAGTGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD077829             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTTGATCAAGATGTAGCTGCTTGCCTTTATGATTTTCAACGTGCACAAAATGTTTGGCCTGAATGTCCGGATGTTTATCTTCATCGAGGACAAATTAATTTATTAGCTGACCAATTAGATGAAGCATTGCATGATTTGAATACAGCTGTTAAATTAAAGCCGGAATTTTCAGTTGCACAGGCTCAACGTTTGTACACCCTATATCGATGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AI976871             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGCACAAAATGTTTGGCCTGAATGTCCGGATGTTTATCTTCATCGAGGACAAATTAATTTATTAGCTGACCAATTAGATGAAGCATTGCATGATTTGAATACAGCTGTTAAATTAAAGCCGGAATTTTCAGTTGCACAGGCTCAACGTTTGTACACCCTATATCGATGCGCATTAACTGCCGGTGATATTAGCAAAGTGGATTCTCGTATTGAAGAGTTTCGTCGATTAGTGAAGAAATACCCCAATTGTTTAGAAACTCATTCCTTATTTGCTCAGATCCTGTCTGAACGTGGTGATTTTAAAGAAAGTGATAAAATATTTGCTGATTTAATAACCTTAGCACCAGATTCTGGATTAGCCTATGCACAATCG GGTTTATTACAATTAAAATGGAAACAAGATCGTGATGCAGCATTATGTTTTTTTATAGAACGTATACAAAAAGATCCTAAATGTGAATTAATACATGAATTACTTGGTCAATTATCAGTAGAA                                                                                                                                                                                                          ]
[+] EMBL AW017108             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTTTGGCCTGAATGTCCGGATGTTTATCTTCATCGAGGACAAATTAATTTATTAGCTGACCAATTAGATGAAGCATTGCATGATTTGAATACAGCTGTTAAATTAAAGCCGGAATTTTCAGTTGCACAGGCTCAACGTTTGTACACCCTATATCGATGCGCATTAACTGCCGGTGATATTAGCAAAGTGGATTCTCGTATTGAAGAGTTTCGTCGATTAGTGAAGAAATACCCCAATTGTTTAGAAACTCATTCCTTATTTGCTCAGATCCTGTCTGAACGTGGTGATTTTAAAGAAAGTGATAAAATATTTGCTGATTTAATAACCTTAGCACCAGATTCTGGATTAGCCTATGCAC ATCGTGGTTTATTACAATTAAAATGGAAACAAGATCGTGATGCAGCATTATGTTTTTTTATAGAAGGTATACAAAAAGATCCTAAATGTGAATTAATACATGAATTACTTGGTCAATTATCAGTAGAAAAGGGTCAATTTAATGAAGCATTAAAACATTTTGATATGGCAATAAAACAAGCTAAAACACAAAATGATTTATCACATTTAATAGCATTACGTGAAGGTGTTAATGCCCAATTAAAAGTATGTGAACAATATAAAA                                                                  ]
[+] EMBL BF936321             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAGCCGGAATTTTCAGTTGCACAGGCTCAACGTTTGTACACCCTATATCGATGCGCATTAACTGCCGGTGATATTAGCAAAGTGGATTCTCGTATTGAAGAGTTTCGTCGATTAGTGAAGAAATACCCCAATTGTTTAGAAACTCATTCCTTATTTGCTCAGATCCTGTCTGAACGTGGTGATTTTAAAGAAAGTGATAAAATATTTGCTGATTTAATAACCTTAGCACCAGATTCTGGATTAGCCTATGCACAATCG GGTTTATTACAATTAAAATGGAAACAAGATCGTGATGCAGCATTATGTTTTTTTATAGAAGGTATACAAAAAGATCCTAAATGTGAATTAATACATGAATTACTTGGTCAATTATCAGTAGAAAAAGGTCAATTTAATGAAGCATTAAAACATTTTGATATGGCAATAAAACAAGCTAAAACACANAATGATTTATCACATTTAAT                                                                                                                       ]
[-] EMBL CD075130             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATTNTCAGTTGCACAGGCTCAACGTTTGTACACCCTATATCGATGCGCATTAACTGCCGGTGATATTAGCAAAGTGGATTCTCGTATTGAAGAGTTTCGTCGATTAGTGAAGAAATACCCCAATTGTTTAGAAACTCATTCCTTATTTGCTCAGATCCTGTCTGAACGTGGTGATTTTAAAGAAAGTGATAAAATATTTGCTGATTTAATAACCTTAGCACCAGATTCTGGATTAGCCTATGCAC ATCGTGGTTTATTACAATTAAAATGGAAACAAGATCGTGATGCAGCATTATGTTTTTTTATAGAAGGTATACAAAAAGATCCTAAATGTGAATTAATACATGAATTACTTGGTCAATTATCAGTAGAAAAGGGTCAATTTAATGAAGCATTAAAACATTTTGATATGGCAATAAAACAAGCTAAAACACAAAATGATTTATCACATTTAATAGCATTACGTGAAGGTGTTAATGCCCAATTAAAAGTATGTGAACAATATAAAATATCAATACCGGATGTATTATCAAGTATACAACATGAACAACAAAGATTCTTGATGGCTATGCAAG]
[+] EMBL AI977661             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTGCTCAGATCCTGTCTGAACGTGGTGATTTTAAAGAAAGTGATAAAATATTTGCTGATTTAATAACCTTAGCACCAGATTCTGGATTAGCCTATGCAC ATCGTGGTTTATTACAATTAAAATGGAAACAAGATCGTGATGCAGCATTATGTTTTTTTATAGAAGGTATACAAAAAGATCCTAAATGTGAATTAATACATGAATTACTTGGTCAATTATCAGTAGAAAAGGGTCAATTTAATGAAGCATTAAAACATTTTGATATGGCAATAAAACAAGCTAAAACACAAAATGATTTATCACATTTAATAGCATTACGTGAAGGTGTTAATGCCCAATTAAAAGTATGTGAACAATATAAAATATCAATACCGGATGTATTATCAAGTATACAACATGAACAACANAAATTCTTGATGGCTATGCAA ]
consensusID : consensus_10230#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 356 fasta sequence 
                              [CCACACGTGAAACCGTAGATCAGACAGACAAGTAACTCCTTATGATCGCGATGAAGTTTCTTCTAATCCAGCTCAAAACAACAATGAAACACTAACTACTAATAGTACTATACGAAATACAATAAAACAAATCAAGTGCAACATTTCAAATTATTTATTCACTAGCCGAACTGAATCAAATCAAATGAAATTAAATTCCAATATGCACATAAATGATACTACTAATAAATCATCTTCTAAATTATCTAATCAAAATGAAAATGAGTTGGATGACAAAGAAAGCAATAGCATCACCACAAGTTCAAATAATACTGACACCCTCAATAAAAATAAAACAAATGAATCTATTCAAGTGG]
[+] EMBL CD061537             [CCACACGTGAAACCGTAGATCAGACAGACAAGTAACTCCTTATGATCGCGATGAAGTTTCTTCTAATCCAGCTCAAAACAACAATGAAACACTAACTACTAATAGTACTATACGAAATACAATAAAACAAATCAAGTGCAACATTTCAAATTATTTATTCACTAGCCGAACTGAATCAAATCAAATGAAATTAAATTCCAATATGCACATAAATGATACTACTAATAAATCATCTTCTAAATTATCTAATCAAAATGAAAATGAGTTGGATGACAAAGAAAGCAATAGCATCACCACAAGTTCAAATAATACTGACACCCTCAATAAAAATAAAACAAATGAATCTATTCAAGTGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10230#0      CGAGGCCAAAAATTGCGGCACGAGGTCCAATCAGCGTTTAAAAATGTAAATTTAGCCTTA 60
consensus_10230#1      ---------------CCACACGTGA---AACCGTAGATCAGACAGACAAGTAACTCCTTA 42
                                      *  **** *    ** *   * * * * *   ** *    *****
consensus_10230#0      AATTATATGACAAAAGGTGATT--ATCAACAGTCAGCTGACTATTCAATGAAAGCTGTTA 118
consensus_10230#1      TGAT-CGCGATGAAGTTTCTTCTAATCCAGCTCAAAACAACAATGAAACACTAACTACTA 101
                          *    **  **   *  *   *** *     *    ** **  **    * **  **
consensus_10230#0      ATT-TATTCGAAAGAATCTTATCGGGTAAGTCGTTCTCAGATGTAAAGAATTTGATTAAT 177
consensus_10230#1      ATAGTACTATACGAAATACAATAAAACAAATCAAGTGCA-ACATTTCAAATT--ATTTAT 158
                       **  ** *  *   ***   **     ** **     ** *  *    ****  *** **
consensus_10230#0      TCATCGTCTCAACTAGA-CGATCGAAATGGTGAAACAATTTCAAAACCAAATGACAATCC 236
consensus_10230#1      TCACTAGCCGAACTGAATCAAATCAAATG--AAATTAAATTCCAATATGCACATAAATGA 216
                       ***    *  ****  * * *   *****   **  ** *** **     *    ***  
consensus_10230#0      CGCCTCTGTTGAGTC------TAATGAACATAATCAAAATGAAAATGAGTTGGATGACAA 290
consensus_10230#1      TACTACTAATAAATCATCTTCTAAATTATCTAATCAAAATGAAAATGAGTTGGATGACAA 276
                         *  **  * * **      ***   *  ******************************
consensus_10230#0      AGAAAGCAATAGCATCACCACAAATTCAAATAATACTGACACCCTCAATAAAAATAAAAC 350
consensus_10230#1      AGAAAGCAATAGCATCACCACAAGTTCAAATAATACTGACACCCTCAATAAAAATAAAAC 336
                       *********************** ************************************
consensus_10230#0      AAATGAATCTATTCAAGTGTATATTAAAGAAGTATATAATCAAATTTCACTTTTACACGC 410
consensus_10230#1      AAATGAATCTATTCAAGTGG---------------------------------------- 356
                       *******************                                         
consensus_10230#0      TACTTATCAAGCATTAGCTGGACGTTCTGAAGAAGCAAAAGAACGTTTTCAAAATATTGG 470
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      TATGGTAGACTCTGGAGCTTCATTAGTGGTTCGCGTTAATGCATTGATTAAATCTGCATG 530
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      CTTATCAATGTCAGTTGATCAAGATGTAGCTGCTTGCCTTTATGATTTTCAACGTGCACA 590
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      AAATGTTTGGCCTGAATGTCCGGATGTTTATCTTCATCGAGGACAAATTAATTTATTAGC 650
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      TGACCAATTAGATGAAGCATTGCATGATTTGAATACAGCTGTTAAATTAAAGCCGGAATT 710
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      TTCAGTTGCACAGGCTCAACGTTTGTACACCCTATATCGATGCGCATTAACTGCCGGTGA 770
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      TATTAGCAAAGTGGATTCTCGTATTGAAGAGTTTCGTCGATTAGTGAAGAAATACCCCAA 830
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      TTGTTTAGAAACTCATTCCTTATTTGCTCAGATCCTGTCTGAACGTGGTGATTTTAAAGA 890
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      AAGTGATAAAATATTTGCTGATTTAATAACCTTAGCACCAGATTCTGGATTAGCCTATGC 950
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      ACATCGGGTTTATTACAATTAAAATGGAAACAAGATCGTGATGCAGCATTATGTTTTTTT 1010
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      ATAGAAGGTATACAAAAAGATCCTAAATGTGAATTAATACATGAATTACTTGGTCAATTA 1070
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      TCAGTAGAAAAGGGTCAATTTAATGAAGCATTAAAACATTTTGATATGGCAATAAAACAA 1130
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      GCTAAAACACAAAATGATTTATCACATTTAATAGCATTACGTGAAGGTGTTAATGCCCAA 1190
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      TTAAAAGTATGTGAACAATATAAAATATCAATACCGGATGTATTATCAAGTATACAACAT 1250
consensus_10230#1      ------------------------------------------------------------
                                                                                   
consensus_10230#0      GAACAACAAAGATTCTTGATGGCTATGCAAG 1281
consensus_10230#1      -------------------------------
                                                      
 | 
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||