Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10233 cluster # 10233       Sequences # 14       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10233#0 length = 879 sequences # 5  
consensus_10233#1 length = 531 sequences # 7  
consensus_10233#2 length = 458 sequences # 1  
consensus_10233#3 length = 296 sequences # 1  

consensusID : consensus_10233#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 879
fasta sequence
                              [GTAAGGCAAAGATTAGCAGCATTTATTCACTTTTACAAAAAAATTCCTAGCGTTTTTTTCAATTAATACGTGAGGAATTGTTATGTCAGAATCAAAAAGTGATAAATATAACATTGAAGAACGTGGATCAAATAATACTAATCCTTCACAGTCAGATCAGCTTGCTTTCACTTCTAGTCAAGTCACCCTAAAAGCATTTGATGGCAGTGATTCTGGTGATGTATCGACTGATGACCTGCCTAAACTTTGTACGCCTGGGTCACGTTTAGTACCAGCTGGAAGCCTAACCAACAGTGATAGTACTTCAAGCTATAAAAGTCGAGAGAAACGTCGTTCTAGTGTCCTAATTGACAAACGAGCCTATCATCAAAATCAACATCCTTCTTTGTCTTCAATTTCATCCGGTCAAGATGACTCATCATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTGTGTTCAAAAAATCCGCCAAGCTTCTTTTGGACGTAGAGAAATTGAAATAGCTGAACAAGAAATGCCTGGTTTGATGGCATTAAGAAAGCGTGCTAAAACTGATCAGCCATTAAAAGGAGCCAAAATTCTCGGTTGTACACATGTGACCGCGCATACAGCTGTACTACTTGAAACAATGGTATGTCTAGGCGCCCAAGTTCGATGGTGTGCTTGTAACATATATTCAACACAGAATGAAGTAGCAGCAGCGTTGGCTGAATCCGGTGTTCCTATTTATGCATGGAAGGGTGAAAATGAAGAGGATTTCTGGTGGTGTATTAATCGATGTATATCTGCTGA]

[+] EMBL CD131251             [GTAAGGCAAAGATTAGCAGCATTTATTCACTTTTACAAAAAAATTCCTAGCGTTTTTTTCAATTAATACGTGAGGAATTGTTATGTCAGAATCAAAAAGTGATAAATATAACATTGAAGAACGTGGATCAAATAATACTAATCCTTCACAGTCAGATCAGCTTGCTTTCACTTCTAGTCAAGTCACCCTAAAAGCATTTGATGGCAGTGATTCTGGTGATGTATCGACTGATGACCTGCCTAAACTTTGTACGCCTGGGTCACGTTTAGTACCAGCTGGAAGCCTAACCAACAGTGATAGTACTTCAAGCTATAAAAGTCGAGAGAAACGTCGTTCTAGTGTCCTAATTGACAAACGAGCCTATCATCAAAATCAACATCCTTCTTTGTCTTCAATTTCATCCGGTCAAGATGACTCATCATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTGTGTTC                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD131642             [GTAAGGCAAAGATTAGCAGCATTTATTCACTTTTACAAAAAAATTCCTAGCGTTTTTTTCAATTAATACGTGAGGAATTGTTATGTCAGAATCAAAAAGTGATAAATATAACATTGAAGAACGTGGATCAAATAATACTAATCCTTCACAGTCAGATCAGCTTGCTTTCACTTCTAGTCAAGTCACCCTAAAAGCATTTGATGGCAGTGATTCTGGTGATGTATCGACTGATGACCTGCCTAAACTTTGTACGCCTGGGTCACGTTTAGTACCAGCTGGAAGCCTAACCAACAGTGATAGTACTTCAAGCTATAAAAGTCGAGAGAAACGTCGTTCTAGTGTCCTAATTGACAAACGAGCCTATCATCAAAATCAACATCCTTCTTTGTCTTCAATTTCATCCGGTCAAGATGACTCATCATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATNTAATGATTTC                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD128947             [                                                                                                                                                                                                                                                                                                                                                                                                                                 ATCATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTGTGTTCAAAAAATCCGCCAAGCTTCTTTTGGACGTAGAGAAATTGAAATAGCTGAACAAGAAATGCCTGGTTTGATGGCATTAAGAAAGCGTGCTAAAACTGATCAGCCATTAAAAGGAGCCAAAATTCTCGGTTGTACACATGTGACCGCGCATACAGCTGTACTACTTGAAACAATGGTATGTCTAGGCGCCCAAGTTCGATGGTGTGCTTGTAACATATATTCAACACAGAATGAAGTAGCAGCAGCGTTAGCTGAATCCGGTGTTCCTATTTATGCATGGAAGGGTGAAAATGAAGAGGATTTCTGGTG                           ]
[+] EMBL CD064325             [                                                                                                                                                                                                                                                                                                                                                                                                                                   CATATACTGGATCTAG TCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTGTGTTCAAAAAATCCGCCAAGCTTCTTTTGGACGCAGAGAAATTGAAATAGCTGAACAAGAAATGCCTGGTTTGATGGCATTAAGAAAGCGTGCTAAAACTGATCAGCCATTAAAAGGAGCCAAAATTCTCGGTTGTACACATGTGACCGCGCATACAGCTGTACTACTTGAAACAATGGTATGTCTAGGCGCCCAAGTTCGATGGTGTGCTTGTAACATATATTCAATACAGAATGAAGTAGCAGCAGCGTTGGCTGAATCCGGTGTTCCTATTTATGCATGa                                                        ]
[+] EMBL AI975197             [                                                                                                                                                                                                                                                                                                                                                                                                                                          TGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTGTGTTCAAAAAATCCGCCAAGCTTCTTTTGGACGTAGAGAAATTGAAATAGCTGAACAAGAAATGCCTGGTTTGATGGCATTAAGAAAGCGTGCTAAAACTGATCAGCCATTAAAAGGAGCCAAAATTCTCGGTTGTACACATGTGACCGCGCATACAGCTGTACTACTTGAAACAATGGTATGTCTAGGCGCCCAAGTTCGATGGTGTGCTTGTAACATATATTCAACACAGAATGAAGTAGCAGCAGCGTTGGCTGAATCCGGTGTTCCTATTTATGCATGGAAGGGTGAAACTGAAGAGGATTTCTGGTGGTGTATTAATCGATGTATATCTGCTGA]


>consensus_10233#0 GTAAGGCAAAGATTAGCAGCATTTATTCACTTTTACAAAAAAATTCCTAGCGTTTTTTTC AATTAATACGTGAGGAATTGTTATGTCAGAATCAAAAAGTGATAAATATAACATTGAAGA ACGTGGATCAAATAATACTAATCCTTCACAGTCAGATCAGCTTGCTTTCACTTCTAGTCA AGTCACCCTAAAAGCATTTGATGGCAGTGATTCTGGTGATGTATCGACTGATGACCTGCC TAAACTTTGTACGCCTGGGTCACGTTTAGTACCAGCTGGAAGCCTAACCAACAGTGATAG TACTTCAAGCTATAAAAGTCGAGAGAAACGTCGTTCTAGTGTCCTAATTGACAAACGAGC CTATCATCAAAATCAACATCCTTCTTTGTCTTCAATTTCATCCGGTCAAGATGACTCATC ATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAA GGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTG TGTTCAAAAAATCCGCCAAGCTTCTTTTGGACGTAGAGAAATTGAAATAGCTGAACAAGA AATGCCTGGTTTGATGGCATTAAGAAAGCGTGCTAAAACTGATCAGCCATTAAAAGGAGC CAAAATTCTCGGTTGTACACATGTGACCGCGCATACAGCTGTACTACTTGAAACAATGGT ATGTCTAGGCGCCCAAGTTCGATGGTGTGCTTGTAACATATATTCAACACAGAATGAAGT AGCAGCAGCGTTGGCTGAATCCGGTGTTCCTATTTATGCATGGAAGGGTGAAAATGAAGA GGATTTCTGGTGGTGTATTAATCGATGTATATCTGCTGA



consensusID : consensus_10233#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 531
fasta sequence
                              [GTGTGATAATGAGTAGTGTACAGCTGAAGAGCGTGGACAAGGTACTTGAAGTGTCATCCACTCCAATACACTCTAGAGGTTGTAATTCTGGCTATGAGGAGCAAACTAAGGATTCGCGTCTCATATTATCTTCAGCGAAGAAAAGATTGTCCAGTAAATCAAACTCAGAAACCGGAAGCTTCGACTCAGCATCATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTGTGTTCAAAAAATCCGCCAAGCTTCT-TTTGGACGTAGAGAAATTGAAATAGCTGAACAAGAAATGCCTGGTTTGATGGCATTAAGAAAGCGTGCTAAAACTGATCAGCCATTAAAAGGAGCCAAAATTCTTCGTTGTACACATGTGACCGCGCATACAGCTGTACTACTTGAAACAATGTATGTCTAGGCGCCCAAGTTCGATGGGTGCTTGTAACATA]

[-] EMBL CD190014             [GTGTGATAATGAGTAGTGTACAGCTGAAGAGCGTGGACAAGGTACTTGAAGTGTCATCCACTCCAATACACTCTAGAGGTTGTAATTCTGGCTATGAGGAGCAAACTAAGGATTCGCGTCTCATATTATCTTCAGCGAAGAAAAGATTGTCCAGTAAATCAAACTCAGAAACCGGAAGCTTCGACTCAGCATCATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGT                                                                                                                                                                                                                                                                                ]
[+] EMBL AI976476             [                        TGAAGAGCGTGGACAAGGTACTTGAAGTGTCATCCACTCCAATACACTCTAGAGGTTGTAATTCTGGCTATGAGGAGCAAACTAAGGATTCGCGTCTCATATTATCTTCAGCGAAGAAGAGATTGTCCAGTAAATCAAACTCAGAAACCGGAAGCTTCGACTCAGCATCATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTGTGTTCAAAAAATCCGCCAAGCTTCT TTTGGACGTAGAGAAATTGAAATAGCTGAACAAGAAATGCCTGGTTTGATGGCATTAAGAAAGCGTGCTAAAACTGATCAGCCATTAAAAGGAGCCAAAATTCTTCGTTGTACACATGTGACCGCGCATACAGCTGTACTACTTGAAACAATGTATGTCTAGGCGCCCAAGTTCGATGGGTGCTTGTAACATA]
[-] EMBL CD155974             [                        TGCAGAGCGTGGACAAGGTACTTGAAGTGTCATCCACTCCAATACACTCTAGAGGTTGTAATTCTGGCTATGAGGAGCAAACTAAGGATTCGCGTCTCATATTATCTTCAGCGAAGAAAAGATTGTCCAGTAAATCAAACCCAGAAACCGGAAGCTTCGACTCAGCATCATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTGTGTTCAAAAAATCCGCCAAGCTT                                                                                                                                                                                                    ]
[+] EMBL CD121993             [                                                                             GGTTGTAATTCTGGCTATGAGGAGCGAACTAAGGATTCGCGTCTCATATTATCTTCAGCGAAGAAAAGATTGTCCAGTAAATCAAACTCAGAAACCGGAAGCTTCGACTCAGCATCATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTGTGTTCAAAAAATCCGCCAAGCTTCT TTTGGACGTAGAGAAATTGAAATAGCTGAACAAGAAATGCCTGGTTTGATGGCATTAAGAAAGCGTGCT                                                                                                                            ]
[-] EMBL CD122033             [                                                                              GTTGTAATTCTGGCTATGAGGAGCAAACTAAGGATTCGCGTCTCATATNATCTTCAGCGAAGAAAAGATTGTCCAGTAAATCAAACTCAGAAACCGGAAGCTTCGACTCAGCATCATATACTGGATCTAGTTCGGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTGTGTTCAAAAAATCCGCCAAGCTTCC TTTGGACGTAGAGAAATTGAAATAGCTGAACAAGAAATGCCTGGTTTGATGGCATTAAGAAAGCGTGCTA                                                                                                                           ]
[-] EMBL CD121882             [                                                                              GTTGTAATTCTGGCTATGAGGAGCAAACTAAGGATTCGCGTCTCATATTATCTTCAGCGAAGAAAAGATTGTCCAGTAAATCAAACTCAGAAACCGGAAGCTTCGACTCAGCATCATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTGTGTTCAAAAAATCCGCCAAGCTTCTATTTGGACGTAGAGAAATTGAAATAGCTGAACAAGAAATGCCTGGTTTGATGGCATTAAGAAAGCGTGCTA                                                                                                                           ]
[-] EMBL CD121963             [                                                                              GTTGTAATTCTGGCTATGAGGAGCAAACTAAGGATTCGCGTCTCATATNATCTTCAGCGAAGAAAAGATTGTCCAGTAAATCAAACTCAGAAACCGGAAGCTTCGACTCAGCATCATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAATGATTTCTGTGTTCAAAAAATCCGCCAAGCTTCT TTTGGACGTAGAGAAATTGAAATAGCTGAACAAGAAATGCCTGGTTTGATGGCATTAAGAAAGCGTGCTA                                                                                                                           ]


>consensus_10233#1 GTGTGATAATGAGTAGTGTACAGCTGAAGAGCGTGGACAAGGTACTTGAAGTGTCATCCA CTCCAATACACTCTAGAGGTTGTAATTCTGGCTATGAGGAGCAAACTAAGGATTCGCGTC TCATATTATCTTCAGCGAAGAAAAGATTGTCCAGTAAATCAAACTCAGAAACCGGAAGCT TCGACTCAGCATCATATACTGGATCTAGTTCAGATGATGATGATGATGAAAGTCAACAAC GTGAAAATCCAAAGGAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGAT TTAATGATTTCTGTGTTCAAAAAATCCGCCAAGCTTCTTTTGGACGTAGAGAAATTGAAA TAGCTGAACAAGAAATGCCTGGTTTGATGGCATTAAGAAAGCGTGCTAAAACTGATCAGC CATTAAAAGGAGCCAAAATTCTTCGTTGTACACATGTGACCGCGCATACAGCTGTACTAC TTGAAACAATGTATGTCTAGGCGCCCAAGTTCGATGGGTGCTTGTAACATA



consensusID : consensus_10233#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 458
fasta sequence
                              [AAGTGTCATCCACTCCAATACACTCTAGAGGTTGTAATTCTGGCTATGAGGAGCAAACTAAGGATGSTCCTCCATAATTWATTCTTCCAGGCCGRAAGAAAAAAGGATTTGTTCCCARGTTAAAATTCCAAAACTTCCAAGAAAAACCCGGGAAAGGCCTTTCCGGAACTTCARGGGTAATTTTTTCCGAAAAAAATTCCAGGTTTTTTTTTTACCCGGATTTAGGCCTTATTTTAAATGGCCATTCCAACCCAAATTCCTTTCCTAATTTCCTCCTTTGGTAACCCTAAAAACSGGGTTTAACTTTAATGGGGTTTCYTTTTAAAGAATTTTAAGGGGGRACGRATAATTTTGGCCTTGGCYTCCACMAATCMATTGGGGGTTAMCCGGAGGCCTCCGRAAATTTCCGTTAAATTYCATKGGGTYCMATWAGGCCTGGKTTTTCCCTGGTGGTGGAA]

[+] EMBL BE519440             [AAGTGTCATCCACTCCAATACACTCTAGAGGTTGTAATTCTGGCTATGAGGAGCAAACTAAGGATGSTCCTCCATAATTWATTCTTCCAGGCCGRAAGAAAAAAGGATTTGTTCCCARGTTAAAATTCCAAAACTTCCAAGAAAAACCCGGGAAAGGCCTTTCCGGAACTTCARGGGTAATTTTTTCCGAAAAAAATTCCAGGTTTTTTTTTTACCCGGATTTAGGCCTTATTTTAAATGGCCATTCCAACCCAAATTCCTTTCCTAATTTCCTCCTTTGGTAACCCTAAAAACSGGGTTTAACTTTAATGGGGTTTCYTTTTAAAGAATTTTAAGGGGGRACGRATAATTTTGGCCTTGGCYTCCACMAATCMATTGGGGGTTAMCCGGAGGCCTCCGRAAATTTCCGTTAAATTYCATKGGGTYCMATWAGGCCTGGKTTTTCCCTGGTGGTGGAA]


>consensus_10233#2 AAGTGTCATCCACTCCAATACACTCTAGAGGTTGTAATTCTGGCTATGAGGAGCAAACTA AGGATGSTCCTCCATAATTWATTCTTCCAGGCCGRAAGAAAAAAGGATTTGTTCCCARGT TAAAATTCCAAAACTTCCAAGAAAAACCCGGGAAAGGCCTTTCCGGAACTTCARGGGTAA TTTTTTCCGAAAAAAATTCCAGGTTTTTTTTTTACCCGGATTTAGGCCTTATTTTAAATG GCCATTCCAACCCAAATTCCTTTCCTAATTTCCTCCTTTGGTAACCCTAAAAACSGGGTT TAACTTTAATGGGGTTTCYTTTTAAAGAATTTTAAGGGGGRACGRATAATTTTGGCCTTG GCYTCCACMAATCMATTGGGGGTTAMCCGGAGGCCTCCGRAAATTTCCGTTAAATTYCAT KGGGTYCMATWAGGCCTGGKTTTTCCCTGGTGGTGGAA



consensusID : consensus_10233#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 296
fasta sequence
                              [CCAGCGGCTCAGGATCGATAGTACTCTAGACTGCTCGTACGGTTTCGTGTGTCACTGTCCCAGTCGATAAGTTGCTGCTCTCTAACTGGCGGTCTCATCACCTCACCCATCAACTAGGCATACACTCGGCCACAAGTATAACAGCAGCAGTATAACAGCAAATTTCGGTAAACTCTACAGGATTTAATGATTTCTGCGTTCAAAAAATCCGCCAAGCTTCTTTTGGACCTATACAAATTGAAATAGCTGAACAACGAATGCCTTGCGTTGATGGCATCTCAGTATAGCAGTGCTAC]

[+] EMBL CD090784             [CCAGCGGCTCAGGATCGATAGTACTCTAGACTGCTCGTACGGTTTCGTGTGTCACTGTCCCAGTCGATAAGTTGCTGCTCTCTAACTGGCGGTCTCATCACCTCACCCATCAACTAGGCATACACTCGGCCACAAGTATAACAGCAGCAGTATAACAGCAAATTTCGGTAAACTCTACAGGATTTAATGATTTCTGCGTTCAAAAAATCCGCCAAGCTTCTTTTGGACCTATACAAATTGAAATAGCTGAACAACGAATGCCTTGCGTTGATGGCATCTCAGTATAGCAGTGCTAC]


>consensus_10233#3 CCAGCGGCTCAGGATCGATAGTACTCTAGACTGCTCGTACGGTTTCGTGTGTCACTGTCC CAGTCGATAAGTTGCTGCTCTCTAACTGGCGGTCTCATCACCTCACCCATCAACTAGGCA TACACTCGGCCACAAGTATAACAGCAGCAGTATAACAGCAAATTTCGGTAAACTCTACAG GATTTAATGATTTCTGCGTTCAAAAAATCCGCCAAGCTTCTTTTGGACCTATACAAATTG AAATAGCTGAACAACGAATGCCTTGCGTTGATGGCATCTCAGTATAGCAGTGCTAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10233#0      GTAAGGCAAAGATTAGCAGCATTTATTCACTTTTACAAAAAAATTCCTAGCGTTTTTTTC 60
consensus_10233#1      ------------------------------------------------------------
consensus_10233#3      ------------------------------------------------------------
consensus_10233#2      ------------------------------------------------------------
                                                                                   

consensus_10233#0      AATTAATACGTGAGGAATTGTTATGTCAGAATCAAAAAGTGATAAATATAACATTGAAGA 120
consensus_10233#1      ------------------------------------------------------------
consensus_10233#3      ------------------------------------------------------------
consensus_10233#2      ------------------------------------------------------------
                                                                                   

consensus_10233#0      ACGTGGATCAAATAATACTAATCCTTCACAGTCAGATCAGCTTGCTTTCACTTCTAGTCA 180
consensus_10233#1      ------------------------------------------------------------
consensus_10233#3      ------------------------------------------------------------
consensus_10233#2      ------------------------------------------------------------
                                                                                   

consensus_10233#0      AGTCACCCTAAAAGCATTTGATGGCAGTGATTCTGGTGATGTATCGACTGATGACCTGCC 240
consensus_10233#1      -----------------------------------GTGTGATAATGAGTAGTGTACAGCT 25
consensus_10233#3      ------------------------------------------------------------
consensus_10233#2      ------------------------------------------------------------
                                                                                   

consensus_10233#0      TAAACTTTGTACGCCTGGGTCACGTTTAGTACCAGCTGGAAGCCTAACCAACAGTGATAG 300
consensus_10233#1      GAAGA---GCGTGGACAAGGTACTTGAAGTGTCATCCACTCCAATACACTCTAGAGGTTG 82
consensus_10233#3      ------------------------------------------------------------
consensus_10233#2      --------------------------AAGTGTCATCCACTCCAATACACTCTAGAGGTTG 34
                                                                                   

consensus_10233#0      TACTTCAAGCTATAAAAGTCGAGAGAAACGT-CGT-TCTAGTGTCC--TAATTGACAAAC 356
consensus_10233#1      TAATTCTGGCTATGAGGAGCAAACTAAGGATTCGCGTCTCATATTA--TCTTCAGCGAA- 139
consensus_10233#3      -----------------------CCAGCGGCTCAGGATCGATAGTA--CTCTAGACT--- 32
consensus_10233#2      TAATTCTGGCTATGAGGAGCAAACTAAGGATGSTCCTCCATAATTWATTCTTCCAGGCCG 94
                                                *                         *        

consensus_10233#0      GAGCCTATCATCAAAATCAACATCCTTCTTTGTCTTCAATTTCATCCGGTCAAGATGACT 416
consensus_10233#1      GAAAAGATTGTCCAGTAAATCAAACTCAGAAACCGGAAGCTTCGAC---TCAG------- 189
consensus_10233#3      GCTCGTACGGTTTCGTGTGTCACTGTCCCAGTCGATAAGTTGCTGCTCTCTAACTGGCGG 92
consensus_10233#2      RAAGAAAAAAGGATTTGTTCCCARGTTAAAATTCCAAAACTTCCAAGAAAAACCCGGGAA 154
                             *             *    *           *  * *        *        

consensus_10233#0      CATCATATACTGGATCT--AGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAA 474
consensus_10233#1      CATCATATACTGGATCT--AGTTCAGATGATGATGATGATGAAAGTCAACAACGTGAAAA 247
consensus_10233#3      TCTCAT-CACCTCACCC--A--TCAACTAGGCAT-------ACACTCGGCCACAAGTATA 140
consensus_10233#2      AGGCCTTTCCGGAACTTCARGGGTAATTTTTTCCGAAAAAAATTCCAGGTTTTTTTTTTA 214
                          * *   *   *          *  *             *                 *

consensus_10233#0      TCCAAAG--GAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAAT 532
consensus_10233#1      TCCAAAG--GAACGTTATTTAAAACCTGGACTTAGAGCTGTAAACTCTAGAGGATTTAAT 305
consensus_10233#3      ACAGCAG--CAGTATAACAGCAAATTTCG----------GTAAACTCTACAGGATTTAAT 188
consensus_10233#2      CCCGGATTTAGGCCTTATTTTAAATGGCCATTCCAACCCAAATTCCTTTCCTAATTTCCT 274
                        *   *        * *    ***                 *  *  *     ****  *

consensus_10233#0      GATTTCTGTGTTCAAAAAATCCG-CCAAGCTTCTTTTGGACGTAGAGAAATTGAAATAGC 591
consensus_10233#1      GATTTCTGTGTTCAAAAAATCCG-CCAAGCTTCTTTTGGACGTAGAGAAATTGAAATAGC 364
consensus_10233#3      GATTTCTGCGTTCAAAAAATCCG-CCAAGCTTCTTTTGGACCTATACAAATTGAAATAGC 247
consensus_10233#2      CCTTTGGTAACCCTAAAAACSGGGTTTAACTTTAATGGGGTTTCYTT---TTAAAGAATT 331
                         ***       * *****   *    * ***   * **   *       ** **  *  

consensus_10233#0      TGAACAAGAAATGCCTGGT-TTGATGGCATTAAGAAAGCGTGCTAAAACTGATCAGCCAT 650
consensus_10233#1      TGAACAAGAAATGCCTGGT-TTGATGGCATTAAGAAAGCGTGCTAAAACTGATCAGCCAT 423
consensus_10233#3      TGAACAACGAATGCCTTGCGTTGATGGCATCTCAGTATAGCAGTGCTAC----------- 296
consensus_10233#2      TTAAGGGGGRACGRATAATTTTGGC----CTTGGCYTCCACMAATCMATTGGGGGTTAMC 387
                       * **      * *  *    ***                        *            

consensus_10233#0      TAAAAGGAGCCAAAATTCTCGGTTGTACACATGTGACCGCGCATACAGCTGTACTACTTG 710
consensus_10233#1      TAAAAGGAGCCAAAATTCTTCGTTGTACACATGTGACCGCGCATACAGCTGTACTACTTG 483
consensus_10233#3      ------------------------------------------------------------
consensus_10233#2      CGGAGGCCTCCGRAAATTTCCGTTAAATTYCATKGGGTYCMATWAGGCCTGGKTTTTCCC 447
                                                                                   

consensus_10233#0      AAACAATGGTATGTCTAGGCGCCCAAGTTCGATGGTGTGCTTGTAACATATATTCAACAC 770
consensus_10233#1      AAACAATG-TATGTCTAGGCGCCCAAGTTCGATGG-GTGCTTGTAACATA---------- 531
consensus_10233#3      ------------------------------------------------------------
consensus_10233#2      TGGTGGTGGAA------------------------------------------------- 458
                                                                                   

consensus_10233#0      AGAATGAAGTAGCAGCAGCGTTGGCTGAATCCGGTGTTCCTATTTATGCATGGAAGGGTG 830
consensus_10233#1      ------------------------------------------------------------
consensus_10233#3      ------------------------------------------------------------
consensus_10233#2      ------------------------------------------------------------
                                                                                   

consensus_10233#0      AAAATGAAGAGGATTTCTGGTGGTGTATTAATCGATGTATATCTGCTGA 879
consensus_10233#1      -------------------------------------------------
consensus_10233#3      -------------------------------------------------
consensus_10233#2      -------------------------------------------------
                                                                        




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)