|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10238#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1230 fasta sequence
[ACTCCACACCACCAACCAGCAATAGAAGTAAAGCCTTCTTGACATCTTCGTGGCCATAAATTTCAGGAGCTAGGGATTGAGCCATTAGTGAGTAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCGGTTGCGCGTGTAACAACTCCACGAACCTGAATAAGATGTCCGATGCTGGAAGCCAATACATTCCGAACACACAACGGCTTTGCATCTGACCTACCGCAGAAATAAACCTCAAAACGTCGTAGAAGCTCAGGCGGGAACCTGGAACGAACTTCCGCCATATTCACAGGTTCAGGGTCGCGGGATACAGCACGTGGGGCTGTCTCTGCATCCGCAGCCCTGATTCTCTGTTCCATTCTGATCCTATGGTCGATAAATATGTCCAGAACATCTTGGGGAACAAGCTCAACTGTCCGAAAATCGGGTAGTAAGTCGTCAATAACTTCAGCAAATATCTTTGTGTAGCGAACAGCGTTGCATTCTATCGCGTTAGCTAAGTCGCTGGAGTGTTCAGCCACATCGTCTATAGAAACATACAGCACCGATTGTTCACGATTTGCAATGCGAGTCAGCTGTTCACTATAAACAAAGTGCTTATTCCCATAACTATCCATCTTGCTATAAAAACGCAGGAACTGGTCACAAGCTTTCTTGTCTTCATCATAATTCCTTACAGTAGACAAGGCCATAACGAGCTCTCAACTTATATTTCGCTCTTGTTACAGCTAAA]
[+] EMBL CD130715 [ACTCCACACCACCAACCAGCAATAGAAGTAAAGCCTTCTTGACATCTTCGTGGCCATAAATTTCAGGAGCTAGGGATTGAGCCATTAGTGA ]
[+] EMBL CD097696 [ TCTTCGTGGCCATAAATTTCAGGAGCTAGGGATTGAGCCATTAGTAAGTAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTGAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGT ]
[+] EMBL CD119068 [ ATAAATTTCAGGAGCTAGGGATTGAGCCATTAGTGAGTAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGAACACCAGCACCCGGTCCGGCATTCT ]
[-] EMBL CD118934 [ TAAATTTCAGGAGCTAGGGATTGAGCCATTAGTGAGTAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTT ]
[+] EMBL CD145218 [ TAAAACTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAGCTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCNGTTGCGCGTGTAACAACCCCACGAACCTGAATAAGATGTCCGATGCTGGAAG CAATACATTTCGAc ]
[+] EMBL CD145268 [ TAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGCACACTTGGCAGAAAAGCACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAATAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCGGTTGCGCGTGT ACAACTCCACGAACCTGAAT AGATGTCCGATGCTGGAAAGCAATACATTCCG ]
[+] EMBL CD202026 [ TAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAATAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATACGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTNTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCGGTTGCGC ]
[+] EMBL CD097706 [ TAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCACCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTC ]
[+] EMBL CD097679 [ TAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGAAATATGACCAATAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTT ]
[-] EMBL CD148345 [ AAAATCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTNCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACGAGAAGATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCGGTTGCGCGTGAAACAACTCCACGAACCTGAATAAGATGTCCGATGCTGGAAGCCAATACATTCCGA ]
[-] EMBL CD148335 [ GTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAGCCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCGGTTGCGCGTGTAACAACTCCACGAACCTGAATAAGATGTCCGATGCTGGAAGCCAATACATTCCGA ]
[+] EMBL CD124244 [ TCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCGGTTGCGCGTGTAACAACTCCACGAACCTGAATAAGATGTCCGATGCTGGAAGCCAATACATTCCGAACACACAACGGCTTTGCATCTGACCTACCGCAGAAATAAACCTCAAAACGTCGTAGAAGCTCAGGCGGGAACCTGGAACGAACTTCCGCCATATTCA ]
[-] EMBL CD118956 [ TCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTT ]
[-] EMBL CD124310 [ AATAAGATGTCCGATGCTGGAAGCCAATACATTCCGAACACACAACGGCTNTGCATCTGACCTACCGCAGAAATAAACCTCAAAACGTCGTAGAAGCTCAGGCGGGAACCTGGAACGAACTTCCGCCATATTCACAGGTTCAGGGTCGCGGGATACAGCACGTGGGGCTGTCTCTGCATCCGCAGCCCTGATTCTCTGTTCCATTCTGATCCTATGGTCGATAAATATGTCCAGAACATCTTGGGGAACAAGCTCAACTGTCCGAAAATCGGGTAGTAAGTCGTCAATAACTTCAGCAAATATCTTTGTGTAGCGAACAGCGTTGCATTCTATCGCGTTAGCTAAGTCGCTGGAGTGTTCAGCCACATCGTCTATAGAAACATACAGCACCGATTGTTCACGATTTGCAATGCGAGTCAGCTGTTCACTATAAACAAAGTGCTTATTCCCATAACTATCCATCTTGCTATAAAAACGCAGGAACTGGTCACAAGCTTTCTTGTCTTCATCATAATTCCTTACAGTAGACAAGGCCATAACGAGCTCTCAACTTATATTTCGCTCTTGTTACAGCTAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||