These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10238#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1230 fasta sequence [ACTCCACACCACCAACCAGCAATAGAAGTAAAGCCTTCTTGACATCTTCGTGGCCATAAATTTCAGGAGCTAGGGATTGAGCCATTAGTGAGTAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCGGTTGCGCGTGTAACAACTCCACGAACCTGAATAAGATGTCCGATGCTGGAAGCCAATACATTCCGAACACACAACGGCTTTGCATCTGACCTACCGCAGAAATAAACCTCAAAACGTCGTAGAAGCTCAGGCGGGAACCTGGAACGAACTTCCGCCATATTCACAGGTTCAGGGTCGCGGGATACAGCACGTGGGGCTGTCTCTGCATCCGCAGCCCTGATTCTCTGTTCCATTCTGATCCTATGGTCGATAAATATGTCCAGAACATCTTGGGGAACAAGCTCAACTGTCCGAAAATCGGGTAGTAAGTCGTCAATAACTTCAGCAAATATCTTTGTGTAGCGAACAGCGTTGCATTCTATCGCGTTAGCTAAGTCGCTGGAGTGTTCAGCCACATCGTCTATAGAAACATACAGCACCGATTGTTCACGATTTGCAATGCGAGTCAGCTGTTCACTATAAACAAAGTGCTTATTCCCATAACTATCCATCTTGCTATAAAAACGCAGGAACTGGTCACAAGCTTTCTTGTCTTCATCATAATTCCTTACAGTAGACAAGGCCATAACGAGCTCTCAACTTATATTTCGCTCTTGTTACAGCTAAA] [+] EMBL CD130715 [ACTCCACACCACCAACCAGCAATAGAAGTAAAGCCTTCTTGACATCTTCGTGGCCATAAATTTCAGGAGCTAGGGATTGAGCCATTAGTGA ] [+] EMBL CD097696 [ TCTTCGTGGCCATAAATTTCAGGAGCTAGGGATTGAGCCATTAGTAAGTAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTGAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGT ] [+] EMBL CD119068 [ ATAAATTTCAGGAGCTAGGGATTGAGCCATTAGTGAGTAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGAACACCAGCACCCGGTCCGGCATTCT ] [-] EMBL CD118934 [ TAAATTTCAGGAGCTAGGGATTGAGCCATTAGTGAGTAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTT ] [+] EMBL CD145218 [ TAAAACTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAGCTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCNGTTGCGCGTGTAACAACCCCACGAACCTGAATAAGATGTCCGATGCTGGAAG CAATACATTTCGAc ] [+] EMBL CD145268 [ TAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGCACACTTGGCAGAAAAGCACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAATAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCGGTTGCGCGTGT ACAACTCCACGAACCTGAAT AGATGTCCGATGCTGGAAAGCAATACATTCCG ] [+] EMBL CD202026 [ TAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAATAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATACGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTNTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCGGTTGCGC ] [+] EMBL CD097706 [ TAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCACCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTC ] [+] EMBL CD097679 [ TAAAATTCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGAAATATGACCAATAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTT ] [-] EMBL CD148345 [ AAAATCCAGATCACGTAAGCGTTCTATTTCCTCTTCACTCGGTTCGTTGGCATCCGTAACATCATCTGTCTTACTCAATAGTTGTACACTGTGAGCTTNCAAATAGGTATCAGTTAGTAAACCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACGAGAAGATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCGGTTGCGCGTGAAACAACTCCACGAACCTGAATAAGATGTCCGATGCTGGAAGCCAATACATTCCGA ] [-] EMBL CD148335 [ GTTGTACACTGTGAGCTTCCAAATAGGTATCAGTTAGTAAGCCACCAGAGACAGTATTCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCGGTTGCGCGTGTAACAACTCCACGAACCTGAATAAGATGTCCGATGCTGGAAGCCAATACATTCCGA ] [+] EMBL CD124244 [ TCAACGATACAGAAGCTTGATTTGTTCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTTACACGCAGCGGTACCACAAACAGTAAGTGGCATGAACGTTGGGTTATTTATTTCCTGATATGTTTCAGCACCACAACGATCACAAGTGTATGTCGCTGTTGTTATGAGAGGTTTGACTTCGGTTGCGCGTGTAACAACTCCACGAACCTGAATAAGATGTCCGATGCTGGAAGCCAATACATTCCGAACACACAACGGCTTTGCATCTGACCTACCGCAGAAATAAACCTCAAAACGTCGTAGAAGCTCAGGCGGGAACCTGGAACGAACTTCCGCCATATTCA ] [-] EMBL CD118956 [ TCGACCGCTACCAGAAAAGCTTGCTCCGCGTACACTTGGCAGAAAAACACCTGTAACAAGAATATGATCTCCAGGTTGAGCTGCCCGAGTGTTTTCACCTCGAAGATAAATGGTCAGTGCACGAGGAATATGACCAACAGGCACTTGATCAGATAATTCCTGGATACGAATCTCTTGGAATTTAAGGAACTTGGATCCTCGTGTCTGCATATGTAGTCGACCACCACCACCCGGTCCGGCATTCTT ] [-] EMBL CD124310 [ AATAAGATGTCCGATGCTGGAAGCCAATACATTCCGAACACACAACGGCTNTGCATCTGACCTACCGCAGAAATAAACCTCAAAACGTCGTAGAAGCTCAGGCGGGAACCTGGAACGAACTTCCGCCATATTCACAGGTTCAGGGTCGCGGGATACAGCACGTGGGGCTGTCTCTGCATCCGCAGCCCTGATTCTCTGTTCCATTCTGATCCTATGGTCGATAAATATGTCCAGAACATCTTGGGGAACAAGCTCAACTGTCCGAAAATCGGGTAGTAAGTCGTCAATAACTTCAGCAAATATCTTTGTGTAGCGAACAGCGTTGCATTCTATCGCGTTAGCTAAGTCGCTGGAGTGTTCAGCCACATCGTCTATAGAAACATACAGCACCGATTGTTCACGATTTGCAATGCGAGTCAGCTGTTCACTATAAACAAAGTGCTTATTCCCATAACTATCCATCTTGCTATAAAAACGCAGGAACTGGTCACAAGCTTTCTTGTCTTCATCATAATTCCTTACAGTAGACAAGGCCATAACGAGCTCTCAACTTATATTTCGCTCTTGTTACAGCTAAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||