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Schistosoma mansoni
cluster # 10240 cluster # 10240       Sequences # 14       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10240#0 length = 423 sequences # 14  

consensusID : consensus_10240#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 423
fasta sequence
                              [NGCATGAACTAAGAAACTAT-GGCACGTCATTAC-TTGTTCCCTGCTGTAAAATTACTCAAGAAGAAATGTCTTCCATCCCTCAGTGGAATGAAAAGTCAGAATTTTTCCAGTATGCTAATCGACGCAACAGAAGACGCTAACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGATTTTAGATGTTGGTTGTGGTGGAGGTATCCTA-GCGGAAGCA-CTATCTAT-GTTGGGAGCAGAAGTTTTGGGCATAGACCTAATAGAAGAAGGTATAAAAATCGCACAAGAACTTGTTGGAAGC]

[-] EMBL CD196302             [NGCATGANCTAAG AACTATGGGCACGTCA TACTTTGTTNCCTGCTGTAAAA TACTCAAGAAGAAATGTCTT CATCCCTCAGT GAATGAAAAGTCAG ATTTTTCCAGTATGCTAATCGACGCAACAGAAGACGCTGACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGATTTTAGATGTTGGTTGTGGTGGAGGTATCCTA GCGGAAGCA CTATCTAT GTTGGGAGCAGAAGTTTTGGGCATAGACCTAATAGAAGAAGGTA                             ]
[-] EMBL CD196338             [tGCATGANCTAAG AACTATGGGCACGTCATTAC  TGTTCCCTGCTGT AAATTACTCAGAAAGAAATGTCTTCCATCCCTCAGT GAATGAAAAGTCAG ATTTTTCCAGTATGCTAATCGACGCAACAGAAGACGCTAACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGATTTTAGATGTTGGTTGTGGTGGAAGTATCCTA GCGGAAGCA CTATCTAT GTTGGGAGCAGAAGTTTTGGGCATAGACCTAATAGAAGAAGGTA                             ]
[+] EMBL CD140265             [   ATGAACTAAGAAACTAT GGCACGTCATTAC TTGTTCCCTGCTGTAAAATTACTCAAGAAGAAATGTCTTCCATCCCTCAGTGGAATGAAAAGTCAGAATTTTTCCAGTATGCTAATCGACGCAACAGAAGACGCTAACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTATATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGATTTTAGATGTTGGTTGTGGTGGAGGTATCCTA GCGGAAGCA CTATCTAT GTTGGGAGCAGAAGTTTTGGGCATAGACCTAATAGAAGAAGGTATTAAAATCGCACAAG              ]
[+] EMBL CD196342             [   ATGAACTAAGAAACTAT GGCACGTCATTAC TTGTTCCCTGCTGTGAAATTACCCAAGAAGAAATGTCTTCCATCCCTCAGTGGAATGAAAAGTCAGAATTTTTCCAGTATGCTAATCGACGCAACAGAAGACGCTAACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGATTTTAGATGTTGGNTGTGGTGGAGGTATCCTA GCGGAAGCA CTATCTAT GNTGNGAGCAGAAGTTTTGNGCATAGACCTAATAGAAGAAAGTATAA                          ]
[+] EMBL CD140293             [   ATGAACTAAGAAACTAT GGCACGTCATTAC TTGTTCCCTGCTGTAAAATTACTCAAGAAGAAATGTCTTCCATCCCTCAGTGGAATGAAAAGTCAGAATTTTTCCAGTATGCTAATCGACGCAACAGAAGACGCTAACTTCAAACGCTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTCCCAAGATTTTAGATGTTGGTTGTGGTGGAGGTATCCTA GCGGAA                                                                                      ]
[+] EMBL CD140269             [   ATGAACTATGAAACTAT GGCACGTCATTAC TTGTTCCCTGCTGTATAATTACTCAAGAAGAAATGTCTTCCATCCCTCAGTGGAATGAAAAGTCGGAATTTTTCCAGTATGCTAATCGACGCAACAGAAGACGCTAACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGATTTTAGATGTTGGTTGTGGTGGAGGTATCCTA GCGGAAGCA CTATCTAT GTTGGGAGCAGAAGTTTTGGGCATAGACCTAATAGAAGAAGGT                              ]
[+] EMBL CD140280             [   ATGAACTAAGAAACTAT GGCACGTCATTAC TTGTTCCCTGCTGTAAAATTACTCAAGAAGAAATGTCTTCCATCCCTCAGTGGAATGAAAAGTCAGAATTTTTCCAGTATGCT ATCGACGCAACAGAAGACGCTAACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGATTTTAGATGTTGGTTGTGGTGGAGGTATCCTA GCGGAAGCA CTATCTAT GTTGGGAGCAGAAGTTTTGGGCATAGACCTAATAAAAGAAGGT                              ]
[+] EMBL CD196333             [   ATGAACTAAGAAACTAT GGCACGTCATTAC TTGTTCCCTGCTGTAAAATTACTCAAGAAGAAATGTCTTCCATCCCTCAGTGGAATGAAAAGTCAGAATTTTTCCAGTATGCTAATCGACGCAACAGAAGACGCTAACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGACTATTTACCTATGAAAGGTATAAAGATTTTAGATGTTGGATGTGGTGGAGGTATCCTA GCGGAAGCA  TATCTATAGTT GGAGCAGAAGNTTTGGGCATAGA CTAATAGAAG AGGTAT                            ]
[+] EMBL CD140237             [   ATGAACTAAGAAACTAT GGCACGTCATTAC TTGTTCCCTGCTGTAAAATTACTCAAGAAGAAATGTCTTCCATCCCTCAGTGGAATGAAAAGTCAGAATTTTTCCAGTATGCTAATCGACGCAACAGAAGACGCTAACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCGTTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGATTTTAGATGTTGGTTGTGGTGGAGGTATCCTA GCGGAAGCA CTATCTAT GTTGGGAGCCGAAGTTT                                                        ]
[+] EMBL CD140260             [   ATGAACTAAGAAACTAT GGCACGTCATTAC TTGTTCCCTGCTGTAAAATTACTCAAGAAGAAATGTCTTCCATCCCTCAGTGGAATGAAAAGTCAGAATTTTTCCAGTATGCTAATCGACGCAACAGAAGACGCTAACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGATTTTAGATGTTGGTTGTGGTGGAGGTATCCTA GCGGAAGCA CT                                                                                ]
[-] EMBL CD140167             [    TGAACTAAGAAACTAT GGCACGTCATTAC TTGTTCCCTGCTGTAAAATTACTCAAGAAGAAATGTCTTCCATCCCTCAGTGGAATGAAAAGTCAGAATTTGTCCAGTATGCTAATCGACGCAACAGAAGACGCTAACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGATTTTAGATGTTGGTTGTGGTGGAGGTATCCTA GCGGAAGCA CTATCTAT GTTGGGAGCAGAAGTTTTGGGCATAGACCTAATAGAAGAAGGTA                             ]
[-] EMBL CD140286             [    TGAACTAAGAAACTAT GGCACGTCATTAC TTGTTCCCTGCTGTAAAATTACTCAAGAAGAAATGTCTTCCATCCCTCAGTGGAATGAAAAGTCAGAATTTTTCCAGTATGCTAATCGACGCAACAGAAGACGCTAACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGATTTTAGATGTTGGTTGTGGTGGAGGTATCCTA GCGGAAGCA CTATCTAT GTTGGGAGCAGAAGTTTTGGGCATAGACCTAATAGAAGAAGGTA                             ]
[+] EMBL CD077805             [                                                                                                                                            gACTTCATACGTTTCGCCCAGCATTGGTGGGACTATGATGGAGATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTTTGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGNATTTAGATGTTGGTTG                                                                                                             ]
[+] EMBL BE431222             [                                                                                                                                                                                                                                       AAAATGGTAATAGTCCAAAAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAGATTTTAGATGTTGGTTGTGGTGGAGGTATCCTAGGCGGAA CACCTATCTAT GTTGGGAGCAGAAGTTTTGGGCATAGACCTAATAGAAGAAGGTATAAAAATCGCAGAAGAACTTGTTGGAAGC]


>consensus_10240#0 NGCATGAACTAAGAAACTATGGCACGTCATTACTTGTTCCCTGCTGTAAAATTACTCAAG AAGAAATGTCTTCCATCCCTCAGTGGAATGAAAAGTCAGAATTTTTCCAGTATGCTAATC GACGCAACAGAAGACGCTAACTTCAAACGTTTCGCCCAGCATTGGTGGGACTATGATGGA GATTTACAGCCATTACATACTATGAATCGTTTACGTGTACCATTTATTCAAAATGGTCTT TGTCCTATAACTTTATTATCTACAATGGATTCAGTCTATTTACCTTTGAAAGGTAAAAAG ATTTTAGATGTTGGTTGTGGTGGAGGTATCCTAGCGGAAGCACTATCTATGTTGGGAGCA GAAGTTTTGGGCATAGACCTAATAGAAGAAGGTATAAAAATCGCACAAGAACTTGTTGGA AGC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)