cluster # 10249

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10249 cluster # 10249 Sequences # 14 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10249#0 length = 1738 sequences # 13

consensus_10249#1 length = 238 sequences # 1

consensusID : consensus_10249#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1738
fasta sequence

                              [ATATTTTTATTCCATTCCAAATTACAGATAATCAAAACTTAGCAATCAGGAACTAATCAAAATAAAATACTTCAAAAGATTATACTAGAGTAGTCAATAAAATTTATACTCACATACGAATACGTTTACAATTACCAACCATCCAAATAAGATGCAATAATAATAATAATAAGGATGTTTTTCTCTTAATAGATAATGGATATTGAAATAATATATTAAGAAACTCTAGTCTTTTAATATGATGGGGATCTTTAAACTAGTATGAAAGTGTTGAAAACAATGTAGAACTAATTTAAAAGATGGCGTATACGAAATAACAGTAATTGACAGGCGAGTGATTTGTTGTTGCTTTATCGTTAATAAAGATTTTTATTGTACGAATATAAACTGTGTACACCACCTTCCAGTTGAGCTGATGAACTTCGAAGTTCAAAGCGTAACTTTCCACTTCTCGACATATTGTGCAATTCTGTTATACTTCTAGCGCCAATTTGTTGTAATCCATGTTTAACACCAGCTACTAAATACGGAACCAACTGATGAACTGAACCTCTATCAATAATTGTTCCAGAAACACCTTGGGCAACTTTAATACGATCTGATTCACTGAAATATCTTGCTTGACTTTCTGTATGCTGGGACATTGCTTCTAGACTCCCCATACCTCGGTATTTTTTCAATTTCACGCCATCCGAAAATATATATTCTCCAGCTGACTCCGTTGTACCAGCTAANAGTCCACCCATCATAACTGAAGATGCACCAAAACTCAAAGCTTTAACAATATGACCGGCATTTTGAATACCACCATCTGCTATCACAGGCACATCGTACTTATGAGCATATTCAGATACTTTATAAACAGCCTTAGCTTGTGATCTACCAATAGCAGTCACTTCTTGAGTAATACAAATTGACCCACTGCCCATTCCAACGCGTAACCCGTCCACACCAGCATCAATTAAATTTTTCGCTTGTGCACACGTAACAACATTTCCTCCAATTATTTGTAAATCTGGGAACACAGATTTTACGCGCTTTATCATATCCAGTTGATAGATGCTATTACCTTGGGAAGAATCTATAACAATAATATCGACTCCAGCGTTAACCAAAGCATTGACACGATCAAAATCACGCTCTTGTGTAGAAATAGCTGCACCAACAATTAACTGGTTTTCGGAATCTTTGGATGCTAGTGGATGATCTTGATTCTTTTTTAAGTCAGTTCGGGCAATCAATGCCACCAATTCACGATTTTCGTTAATAATTGGTAATTTACCTTTTTTGCTCTTTCGAAGAAGATCATTTGCTTCAGACAATGTCACACCGGAGAACGCTGTAACAAGATCATCAAATGGCGTCATTACTTTTTCAACAGGTGTGTTGAAATCATTCGGGTCCAAGAAATCCACATCACGAAGAGTGACTAAACCGACCAAGCGACTTCCCATATAACCATCTTCAGTCACAGGAATCCCACCAAATCCATATTTTTTCTTTATTTCAATGATATCATAAATGGGTTGTCTTGGTGAAACAACAACTGGAGAAAGGATGAACCCTTGATTATATTTCTTAACCTTCTTCACTTCATTTGCTTGGGCCTCAACAGAACAGTTGTTGTGTACAAAACCTATTGAACCACAAAGACTCATTGCTATAGCCATTTTTGCTTCAGTAACTGTATCCATGGGAGATGATGCAAAGGGAACTTTCAAAGAAAATCGTTTGCATA]

[+] EMBL BF936918             [ATATTTTTATTCCATTCCAAATTACAGATAATCAAAACTTAGCAATCAGGAACTAATCAAAATAAAATACTTCAAAAGATTATACTAGAGTAGTCAATAAAATTTATACTCACATACGAATACGTTTACAATTACCAACCATCCAAATAAGATGCAATAATAATAATAATAAGGATGTTTTTCTCTTAATAGATAATGGATATTGAAATAATATATTAAGAAACTCTAGTCTTTTAATATGATGGGGATCTTTAAACTAGTATGAAAGTGTTGAAAACAATGTAGAACTAATTTAAAAGATGGCGTATACGAAATAACAGTAATTGACAGGCGAGTGATTTGTTGTTGCTTTATCGTTAATAAAGATTTTTATTGTACGAATATAAACTGTGTACACCACCTTCCAGTTGAGCTGATGAACTTCGAAGTTCAAAGCGTAACTTTCCACTTCTCGACATATTGTGCAATTCTGTTATACTTCTAGCGCCAATTTGTTGTAATCCATGTTTAACACCAGCTACTAAATACGGAACCAACTGATGAACTGAACCTCTATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD076462             [ATATTTTTATTCCATTCCAAATTACAGATAATCAAAACTTAGCAATCAGGAACTAATCAAAATAAAATACTTCAAAAGATTATACTAGAGTAGTCAATAAAATTTATACTCACATACGAATACGTTTACAATTACCAACCATCCAAATAAGATGCAATAATAATAATAATAAGGATGTTTTTCTCTTAATAGATAATGGATATTGAAATAATATATTAAGAAACTCTAGTCTTTTAATATGATGGGGATCTTTAAACTAGTATGAAAGTGTTGAAAACAATGTAGAACTAATTTAAAAGATGGCGTATACGAAATAACAGTAATTGACAGGCGAGTGATTTGTTGTTGCTTTATCGTTAATAAAGATTTTTATTGTACGAATATAAACTGTGTACACCACCTTCCAGTTGAGCTGATGAACTTCGAAGTTCAAAGCGTAACTTTCCACTTCTCGACATATTGTGCAATTCTGTTATACTTCTAGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD075761             [                                                GGAACTAATCAAAATAAAATACTTCAAAAGATTATACTAGAGTAGTCAATAAAATTTATACTCACATACGAATACGTTTACAATTACCAACCATCCAAATAAGATGCAATAATAATAATAATAAGGATGTTTTTCTCTTAATAGATAATGGATATTGAAATAATATATTAAGAAACTCTAGTCTTTTAATATGATGGGGATCTTTAAACTAGTATGAAAGTGTTGAAAACAATGTAGAACTAATTTAAAAGATGGCGTATACGAAATAACAGTAATTGACAGGCGAGTGATTTGTTGTTGCTTTATCGTTAATAAAGATTTTTATTGTACGAATATAAACTGTGTACACCACCTTCCAGTTGAGCTGATGAACTTCGAAGTTCAAAGCGTAACTTTCCACTTCTCGACATATTGTGCAATTCTGTTATACTTCTAGCGCCAATTTGTTGTAATCCATGTTTAACACCAGCTACTAAATACGGAACCAACTGATGAACTGAACCTCTATCAATAATTGTTCCAGAAACACCTTGGGCAACTTTAATACGATCTGATTCACTGAAATATCTTGCTTGACTNTCTGTATGCTGGGACATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD074372             [                                                 GAACTAATCAAAATAAAATACTTCAAAAGATTATACTAGAGTAGTCAATAAAATTTATACTCACATACGAATACGTTTACAATTACCAACCATCCAAATAAGATGCAATAATAATAATAATAAGGATGTTTTTCTCTTAATAGATAATGGATATTGAAATAATATATTAAGAAACTCTAGTCTTTTAATATGATGGGGATCTTTAAACTAGTATGAAAGTGTTGAAAACAATGTAGAACTAATTTAAAAGATGGCGTATACAAAATAACAGTAATTGACAGGCGAGTGATTTGTTGTTGCTTTATCGTTAATAAAGATTTTTATTGTACGAATATAAACTGTGTACACCACCTTCCAGTTGAGCTGATGAACTTCGAAGTTCAAAGCGTAACTTTCCACTTCTCGACATATTGTGCAATTCTGTTATACTTCTAGCGCCAATTTGTTGTAATCCATGTTTAACACCAGCTACTAAATACGGAACCAACTGATGAACTGAACCTCTATCAATAATTGTTCCAGAAACACCTTGGGCAACTTTAATACGATCTGATTCACTGAAATATCTTGCTTGACTTTCTGTATGCTGGGACATTGCTTCTAGACTCCCCATACCTCGGTATTTTTTCAATTTCACGCCATCCGAAAATATATATTCTCCAGCTGACTCCGTTGTACCAGCTAANAGTCCACCCATCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD080461             [                                                                                                                                                                                                                                  TAGTCTTTTAATATGATGGGGATCTTTAAACTAGTATGAAAGTG TGAAAACAATGTAGAACTAATTTAAAAGATGGCGTATACAAAATAACAGTAATTGACAGGCGAGTGATTTGTTGTTGCTTTATCGTTAATAAAGATTTTTATTGTACGAATATAAACTGTGTACACCACCTTCCAGTTGAGCTGATGAACTTCGAAGTTCAAAGCGTAACTTTCCACTTCTCGACATATTGTGCAATTCTGTTATACTTCTAGCGCCAATTTGTTGTAATCCATGTTTAACACCAGCTACTAAATACGGAACCAACTGATGAACTGAACCTCTATCAATAATTGTTCCAGAAACACCTTGGGCAACTTTAATACGATCTGATTCACTGAAATATCTTGCTTGACTTTCTGTATGCTGGGACATTGCTTCTAGACTCCCCATACCTCGGTATTTTTTCAATTTCACGCCATCCGAAAATATATATTCTCCAGCTGACTCCGTTGTACCAGCTAAAAGTCCACCCATCATAACTGAAGATGCACCAAAACTCAAAGCTTTAACAATATGACCGGCATTTTGAATACCACCATCTGCTATCACAGGCACATCGTACTTATGAGCATATTCAGATACTTTATAAACAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BG931299             [                                                                                                                                                                                                                                                        TCTTTAAACTAGTATGAAAGTGTTGAAAACAATGTAGAACTAATTTAAAAGATGGCGTATACGAAATAACAGTAATTGACAGGCGAGTGATTAGTTGTTGCTTTATCGTTAATACAGATTTTTATTGTACGAATATAAACTGTGTACACCACCTTCCAGTTGAGCTGATGAACTTCGAAGTTCAAAGCGTAACTTTCCACTTCTCGACATATTGTGCAATTCTGTTATACTTTTAGCGCCAATTTGTTGTAATCCATGTTTAACACCAGCTACTAAATACGGAACCAATTGATGAACTGAc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BG930665             [                                                                                                                                                                                                                                                                                                                                     GACAGGCGAGTGATTTGTTGTTGCTTTATCGTTAATAAAGATTTTTATTGTACGAATATAAACTGTGTACACCACCTTCCAGTTGAGCTGATGAACTTCGAAGTTCAAAGCGTAACTTTCCACTTCTCGACATATTGTGCAATTCTGTTATACTTCTAGCGCCAATTTGTTGTAATCCATGTTTAACACCAGCTACTAAATACGGAACCAACTGATGAACTGAt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BG931115             [                                                                                                                                                                                                                                                                                                                                                                             ATTTTTATTGTACGAATATAAACTGTGTACACCACCTTCCAGTTGAGCTGATGAACTTCGAAGTTCAAAGCGTAACTTTCCACTTCTCGACATATTGTGCAATTCTGTTATACTTCTAGCGCCAATTTGTTGTAATCCATGTTTAACACCAGCTACTAAATACGGAACCAACTGATGAACTGAc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD082876             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACCAAAACTCAAAGCTTTAACAATATGACCGGCATTNTGAATACCACCATCTGCTATCACAGGCACATCGTACTTATGAGCATATTCAGATACTTTATAAACAGCTTTAGCTTGTGATCTACCAATAGCAGTCACTTCTTGAGTAATACAAATTGACCCACTGCCCATTCCAACGCGTAACCCGTCCACACCAGCATCAATTAAATTTTTCGCTTGTGCACACGTAACAACATTTCCTCCAATTATTTGTAAATCTGGGAACACAGATTTTACGCGCTTTATCATATCCAGTTGATAGATGCTATTACCTTGGGAAGAATCTATAACAATAATATCGACTCCAGCGTTAACCAAAGCATTGACACGATCAAAATCACGCTCTTGTGTAGAAATAGCTGCACCAACAATTAACTGGTTTTCGGAATCTTTGGATGCTAGTGGATGATCTTGATTCTTTTTTAAGTCAGTTCGGGCAATCAATGCCACCAATTCACGATTTTCGTTAATAATTGGTAATTTACCTTTTTTGCTCTTTCGAAGAAGATCATTTGCTTCAGACAATGTCACcct                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BF936977             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGCTGCACCAACAATTAACTGGTTTTCGGAATCTTTGGATGCTAGTGGATGATCTTGATTCTTTTTTAAGTCAGTTCGGGCAATCAATGCCACCAATTCACGATTTTCGTTAATAATTGGTAATTTACCTTTTTTGCTCTTTCGAAGAAGATCATTTGCTTCAGACAATGTCACACCGGAGAACGCTGTAACAAGATCATCAAATGGCGTCATTACTTTTTCAACAGGTGTGTTGAAATCATTCGGGTCCAAGAAATCCACATCACGAAGAGTGACTAAACCGACCAAGCGACTTCCCATATAACCATCTTCAGTCACAGGAATCCCACCAAATCCATATTTTTTCTTTATTTCAATGATATCATAAATGGGTTGTCTTGGTGAAACAACAACTGGAGAAAGGATGAACCCTTGATTATATTTCTTAACCTTCTTCACTTCATTTGCTTGGGCCTCAACAGAACAGTTGTTGTGTACAAAACCTATTGAACCACAAAGACTCATTG                                                                              ]
[-] EMBL AI975653             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTGCTTCAGACAATGTCACACAGGAGATCGCTGTAACAAGATCATCAAATGGCGTCATTACTTTTTCAACAGGTGTGTTGATATCATTCGGGTCCAAGAAATCCACATCACGAAGAGTGACTAAACCGACCAAGCGACTTCCCATATAACCATCTTCAGTCACAGGAATCCCACCAAATCCATATTTTTTCTTTATTTCAATGATATCATAAATGGGTTGTCTTGGTGAAGCTGCACCTGGAGAAAGTATGAACCCTTGATTATATTTCTTAACCTTCTTCACTTCATTTGCTTGGGCCTCAACAGAACAGTTGTTGTGTACAAAACCTATTGAACCACAAAGACTCATTG                                                                              ]
[+] EMBL CD192087             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CATCTTCAGTCACAGGAATCCCACCAAATCCATATTTTTTCTTTATTTCAATGATATCATAAATGGGTTGTCTTGGTGAAACAACAACTGGAGAAAGGATGAACCCTTGATTATATTTCTTAACCTTCTTCACTTCAATTGCTTGGGCCTCAACAGAACAGTTGTTGTGTACAAAACCTATTGAACCACACAGAC                                                                                    ]
[+] EMBL CD192139             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CATCTTCAGTCACAGGAATCCCACCAAATCCATATTTTTTCTTTATTTCAATGATATCATTAATGGGTTGTCTTGGTGAAACAACACTTGGAGAAAGGATGAACCCTTGATTATATTTCTTAACCTTCTTCACTTCAATTGCTTGGGCCTCAACAGAACAGTTGTTGTGTACAAAACCTATTGAACCACAAAGACTCATTGCTATAGCCATTTTTGCTTCAGTAACTGTATCCATGGGAGATGATGCAAAGGGAACTTTCAAAGAAAATCGTTTGCATA]




>consensus_10249#0
ATATTTTTATTCCATTCCAAATTACAGATAATCAAAACTTAGCAATCAGGAACTAATCAA
AATAAAATACTTCAAAAGATTATACTAGAGTAGTCAATAAAATTTATACTCACATACGAA
TACGTTTACAATTACCAACCATCCAAATAAGATGCAATAATAATAATAATAAGGATGTTT
TTCTCTTAATAGATAATGGATATTGAAATAATATATTAAGAAACTCTAGTCTTTTAATAT
GATGGGGATCTTTAAACTAGTATGAAAGTGTTGAAAACAATGTAGAACTAATTTAAAAGA
TGGCGTATACGAAATAACAGTAATTGACAGGCGAGTGATTTGTTGTTGCTTTATCGTTAA
TAAAGATTTTTATTGTACGAATATAAACTGTGTACACCACCTTCCAGTTGAGCTGATGAA
CTTCGAAGTTCAAAGCGTAACTTTCCACTTCTCGACATATTGTGCAATTCTGTTATACTT
CTAGCGCCAATTTGTTGTAATCCATGTTTAACACCAGCTACTAAATACGGAACCAACTGA
TGAACTGAACCTCTATCAATAATTGTTCCAGAAACACCTTGGGCAACTTTAATACGATCT
GATTCACTGAAATATCTTGCTTGACTTTCTGTATGCTGGGACATTGCTTCTAGACTCCCC
ATACCTCGGTATTTTTTCAATTTCACGCCATCCGAAAATATATATTCTCCAGCTGACTCC
GTTGTACCAGCTAANAGTCCACCCATCATAACTGAAGATGCACCAAAACTCAAAGCTTTA
ACAATATGACCGGCATTTTGAATACCACCATCTGCTATCACAGGCACATCGTACTTATGA
GCATATTCAGATACTTTATAAACAGCCTTAGCTTGTGATCTACCAATAGCAGTCACTTCT
TGAGTAATACAAATTGACCCACTGCCCATTCCAACGCGTAACCCGTCCACACCAGCATCA
ATTAAATTTTTCGCTTGTGCACACGTAACAACATTTCCTCCAATTATTTGTAAATCTGGG
AACACAGATTTTACGCGCTTTATCATATCCAGTTGATAGATGCTATTACCTTGGGAAGAA
TCTATAACAATAATATCGACTCCAGCGTTAACCAAAGCATTGACACGATCAAAATCACGC
TCTTGTGTAGAAATAGCTGCACCAACAATTAACTGGTTTTCGGAATCTTTGGATGCTAGT
GGATGATCTTGATTCTTTTTTAAGTCAGTTCGGGCAATCAATGCCACCAATTCACGATTT
TCGTTAATAATTGGTAATTTACCTTTTTTGCTCTTTCGAAGAAGATCATTTGCTTCAGAC
AATGTCACACCGGAGAACGCTGTAACAAGATCATCAAATGGCGTCATTACTTTTTCAACA
GGTGTGTTGAAATCATTCGGGTCCAAGAAATCCACATCACGAAGAGTGACTAAACCGACC
AAGCGACTTCCCATATAACCATCTTCAGTCACAGGAATCCCACCAAATCCATATTTTTTC
TTTATTTCAATGATATCATAAATGGGTTGTCTTGGTGAAACAACAACTGGAGAAAGGATG
AACCCTTGATTATATTTCTTAACCTTCTTCACTTCATTTGCTTGGGCCTCAACAGAACAG
TTGTTGTGTACAAAACCTATTGAACCACAAAGACTCATTGCTATAGCCATTTTTGCTTCA
GTAACTGTATCCATGGGAGATGATGCAAAGGGAACTTTCAAAGAAAATCGTTTGCATA

consensusID : consensus_10249#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 238
fasta sequence

                              [TCCATATAACCATCTTCAGTCACAGGAATCCCACCAAATCCATATTTTTTCTTTATTTCAATGATATCATAAATGGGTTGTCTTGGTGAAACAACAACTGGAGAAAGGATGAACCCTTGATTATATTTCTTAACCTTCTTCACTTCATTTGCTTGGGCAACTTTAATACGATCTGATTCACTGAAATATCTTGCTTGACTTTCTGTATGCTGGGACATTGCTTCTAGACTCCCTCGAC]

[-] EMBL CD125732             [TCCATATAACCATCTTCAGTCACAGGAATCCCACCAAATCCATATTTTTTCTTTATTTCAATGATATCATAAATGGGTTGTCTTGGTGAAACAACAACTGGAGAAAGGATGAACCCTTGATTATATTTCTTAACCTTCTTCACTTCATTTGCTTGGGCAACTTTAATACGATCTGATTCACTGAAATATCTTGCTTGACTTTCTGTATGCTGGGACATTGCTTCTAGACTCCCTCGAC]




>consensus_10249#1
TCCATATAACCATCTTCAGTCACAGGAATCCCACCAAATCCATATTTTTTCTTTATTTCA
ATGATATCATAAATGGGTTGTCTTGGTGAAACAACAACTGGAGAAAGGATGAACCCTTGA
TTATATTTCTTAACCTTCTTCACTTCATTTGCTTGGGCAACTTTAATACGATCTGATTCA
CTGAAATATCTTGCTTGACTTTCTGTATGCTGGGACATTGCTTCTAGACTCCCTCGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10249#0      ATATTTTTATTCCATTCCAAATTACAGATAATCAAAACTTAGCAATCAGGAACTAATCAA 60
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      AATAAAATACTTCAAAAGATTATACTAGAGTAGTCAATAAAATTTATACTCACATACGAA 120
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      TACGTTTACAATTACCAACCATCCAAATAAGATGCAATAATAATAATAATAAGGATGTTT 180
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      TTCTCTTAATAGATAATGGATATTGAAATAATATATTAAGAAACTCTAGTCTTTTAATAT 240
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      GATGGGGATCTTTAAACTAGTATGAAAGTGTTGAAAACAATGTAGAACTAATTTAAAAGA 300
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      TGGCGTATACGAAATAACAGTAATTGACAGGCGAGTGATTTGTTGTTGCTTTATCGTTAA 360
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      TAAAGATTTTTATTGTACGAATATAAACTGTGTACACCACCTTCCAGTTGAGCTGATGAA 420
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      CTTCGAAGTTCAAAGCGTAACTTTCCACTTCTCGACATATTGTGCAATTCTGTTATACTT 480
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      CTAGCGCCAATTTGTTGTAATCCATGTTTAACACCAGCTACTAAATACGGAACCAACTGA 540
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      TGAACTGAACCTCTATCAATAATTGTTCCAGAAACACCTTGGGCAACTTTAATACGATCT 600
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      GATTCACTGAAATATCTTGCTTGACTTTCTGTATGCTGGGACATTGCTTCTAGACTCCCC 660
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      ATACCTCGGTATTTTTTCAATTTCACGCCATCCGAAAATATATATTCTCCAGCTGACTCC 720
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      GTTGTACCAGCTAANAGTCCACCCATCATAACTGAAGATGCACCAAAACTCAAAGCTTTA 780
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      ACAATATGACCGGCATTTTGAATACCACCATCTGCTATCACAGGCACATCGTACTTATGA 840
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      GCATATTCAGATACTTTATAAACAGCCTTAGCTTGTGATCTACCAATAGCAGTCACTTCT 900
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      TGAGTAATACAAATTGACCCACTGCCCATTCCAACGCGTAACCCGTCCACACCAGCATCA 960
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      ATTAAATTTTTCGCTTGTGCACACGTAACAACATTTCCTCCAATTATTTGTAAATCTGGG 1020
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      AACACAGATTTTACGCGCTTTATCATATCCAGTTGATAGATGCTATTACCTTGGGAAGAA 1080
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      TCTATAACAATAATATCGACTCCAGCGTTAACCAAAGCATTGACACGATCAAAATCACGC 1140
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      TCTTGTGTAGAAATAGCTGCACCAACAATTAACTGGTTTTCGGAATCTTTGGATGCTAGT 1200
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      GGATGATCTTGATTCTTTTTTAAGTCAGTTCGGGCAATCAATGCCACCAATTCACGATTT 1260
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      TCGTTAATAATTGGTAATTTACCTTTTTTGCTCTTTCGAAGAAGATCATTTGCTTCAGAC 1320
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      AATGTCACACCGGAGAACGCTGTAACAAGATCATCAAATGGCGTCATTACTTTTTCAACA 1380
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      GGTGTGTTGAAATCATTCGGGTCCAAGAAATCCACATCACGAAGAGTGACTAAACCGACC 1440
consensus_10249#1      ------------------------------------------------------------
                                                                                   

consensus_10249#0      AAGCGACTTCCCATATAACCATCTTCAGTCACAGGAATCCCACCAAATCCATATTTTTTC 1500
consensus_10249#1      ---------TCCATATAACCATCTTCAGTCACAGGAATCCCACCAAATCCATATTTTTTC 51
                                 **************************************************

consensus_10249#0      TTTATTTCAATGATATCATAAATGGGTTGTCTTGGTGAAACAACAACTGGAGAAAGGATG 1560
consensus_10249#1      TTTATTTCAATGATATCATAAATGGGTTGTCTTGGTGAAACAACAACTGGAGAAAGGATG 111
                       ************************************************************

consensus_10249#0      AACCCTTGATTATATTTCTTAACCTTCTTCACTTCATTTGCTTGGGCCTCAACAGAACAG 1620
consensus_10249#1      AACCCTTGATTATATTTCTTAACCTTCTTCACTTCATTTGCTTGGGCAACTTTAATACGA 171
                       ***********************************************  *   *  **  

consensus_10249#0      TTGTTGTGTACAAAACCTATTGAACCACAAAGACTCATTGCTATAGCCATTTTTGCTTCA 1680
consensus_10249#1      TC-TGATTCACTGAAA-TATCTTGCTTGACTTTCTGTATGCTG-GGACATTGCTTCTAGA 228
                       *  *  *  **  **  ***    *   *    **   ****   * ****  * **  *

consensus_10249#0      GTAACTGTATCCATGGGAGATGATGCAAAGGGAACTTTCAAAGAAAATCGTTTGCATA 1738
consensus_10249#1      CTCCCTCGAC------------------------------------------------ 238
                        *  **  *