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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10250#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 710 fasta sequence
[TGTATGATTACACCTTTGTTTCACGTATACGGGACGACATCTTCTTCCGTATCTCCAGCTATACCATTTTCTGCCATACTTTATAGTCCATTGTCTGTATAGACCCTTTACACTATACGGAAATTGGCGTGGGCATCCACCTCCTGGACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATATCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTCCATCGCTGCATGAACACCACAACATACAAGAAGGCATAGTGTCGTCAGCGCTGTTAATGATGACTGACATTTCACAGTCATCTCGAAATGGATTGCCTTCCAATAACTTGATGAATAAATTAGACGTGTACAGTGGC]
[+] EMBL CD161333 [TGTATGATTACACCTTTGTTTCACGTATACGGGACGACATCTTCTTCCGTATCTCCAGCTATACCATTTTCTGCCATACTTTATAGTCCATTGTCTGTATAGACCCTTTACACTATACGGAAATTGGCGTGGGCATCCACCTCCTGGACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATATCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTNTAACAGCTTCTCTCTGGTGGCGTTGTCCATCGCTGCATGAACACANGCACATACAAGAAGGCATAATGTCGTCAGCGCTGGTAATGATGACTG ]
[+] EMBL CD161075 [TGTATGATTACACCTTTGTTTCACGTATACGGGACGACATCTTCTTCCGTATCTCCAGCTATACCATTTTCTGCCATACTTTATAGTCCATTGTCTGTATAGACCCTTTACACTATACGGAAATTGGCGTGGGCATCCACCTCCTGGACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATATCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTCAATGGTTNTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTCGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTC ]
[-] EMBL CD118744 [ GTATCTCCAGCTATACCATTTTCTGCCATACTTTATAGTCCATTGTCTGTATAGACCCTTTACACTATACGGAAATTGGCGTGGGCATCCACCTCCTGGACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGCAACCCAATATCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAtcgt ]
[-] EMBL CD096169 [ TCTGCCATACTTTATACTCCATTGTCTGTATAGACCCTNTACACTATACGGAAATTGACGTGGGCATCCACCTCCTGGACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGACTACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATTTCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCAGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTTAATGGTTTTATTGATGTGGCAATAGGTTGTCCTTCCAACTGTCCATGCATCACTGATATCCTTGCATTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCATTGTCCATCGCTGCATGAACACCACAACATACAAGAAGGCATAGTGTC ]
[-] EMBL CD096148 [ TCTGCCATACTTTATACTCCATTGTCTGTATAGACCCTTTACACTATACGGAAATTGACGTGGGCATCCACCTCCTGGACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGACTACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATTTCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCAGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTTAATGGTTTTATTGATGTGGCAATAGGTTGTCCTTCCAACTGTCCATGCATCACTGATATCCTTGCATTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCATTGTCCATCGCTGCATGAACACCACAACATACAAGAAGGCATAGTGTC ]
[-] EMBL CD116160 [ GACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACACTCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATATCAACTGTACTGGCACCAGCCCAATCTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAGGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTCCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTC ]
[-] EMBL CD116141 [ GACCATAATTGCACACAATGCTTAGTTTGAATGGGGAATGAGGACATGTAGCAACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATATCAACTGTACTGGCACCAGCCCAACTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTC ]
[-] EMBL CD123668 [ AATTGCACACAATGGTTAGTTTGAATGGGGAATGAGGACATGTAGCTACACCACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAGTACACCGACCAGCAAGACTCAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCATTGGAACCCAATTTCAGCTGTAGTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGTGTTATATTGCACTATCCGGTCCAAAGTAACATGTGTCAGCCAGCTTTTGCG ]
[-] EMBL CD116288 [ CACATCCGATATCTGTAGTGTTCTCCCACACGATCTGTGTGTAGTGAATACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATATCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTAGCGCTTTCTTCTCCAACCCCATGTTCCATTTCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTC ]
[-] EMBL CD097920 [ TCTCCCACACGATCTGTGTGTAGTGACTACACCGACCAACAAGACACAGTCGGTTGAAGAAATCGTAATTCTTGTATTCATTCAGCCATCGTTGGAACCCAATTTCAACTGTACTGGCACCAGCCCAATTTTGTCCGACGTTAGTAAAGCCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCAGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTTAATGGTTTTATTGATGTGGCAATAGGTTGTCCTTCCAACTGTCCATGCATCACTGATATCCTTGCATTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCATTGTCCATCGCTGCATGAACACCACAACATACAAGAAGGCATAGTGTCGTCAGCGCTGTTAATGATGACTGACATTTCACAGTCATCTCGAAATGGATTGCCTTCCAATAACTTGATGAATAAATTA ]
[-] EMBL CD118752 [ CCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTCCATCGCTGCATGAACACAGCAACATACAAGAAGGCATAATGTCGTCAGCGCTGTTAATGATGACTGACATTTCACAGTCATCTCAAGATGGATTGCCTTCCAACAACTTGATGAATAAATGAGACGTGTACAGTGGC]
[+] EMBL CD095324 [ CCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCAGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTTAATGGTTTTATTGATGTGGCAATAGGTTGTCCTTCCAACTGTCCATGCATCACTGATATCCTTGCATTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCATTGTCCATCGCTGCATGAACACCACAACATACAAGAAGGCATAGTGTCGTCAGCGCTGTTAATGATGACTGACATTTCACAGTCATCTCGAAATGGATTGCCTTCCAATAACTTGATGAATAAATTA ]
[-] EMBL CD118758 [ CCTGGTACTTTGCGTTCTATTGCACTATCCGGTCCAAAGTAACATGTGTCGGCCAGCATTTGCGCTTTCTTCTCCAACTCCATGTTCCATTTCAATGGTTTTATTGATTTGGCAATAGGTTGTCCTTCCAACCGCCCATGCATCACTGATATCCTTGCGTTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCGTTGTCCATCGCTGCATGAACACAGCAACATACAAGAAGGCATAATGTCGTCAGCGCTGTTAATGATGACTGACATTTCACAGTCATCTCAAGATGGATTGCCTTCCAACAACTTGATGA ]
[-] EMBL CD111990 [ CATGTGTCAGCCAGCATTTGCGCTTTCTTCTCCAACTCCACGTTCCATTTTAATGGTTTTATTGATGTGGCAATAGGTTGTCCTTCCAACTGTCCATGCATCACTGATATCCTTGCATTGTTATGCAGCTTTAACAGCTTCTCTCTGGTGGCATTGTCCATCGCTGCATGAACACCACAACATACAAGAAGGCATAGTGTCGTCAGCGCTGTTAATGATGACTGACATTTCACAGTCATCTCGAAATGGATTGCCTTCCAATAACTTGATGAATAAATTA ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||