cluster # 10264

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Schistosoma mansoni
cluster # 10264 cluster # 10264 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10264#0 length = 1342 sequences # 10
consensus_10264#1 length = 646 sequences # 1

consensus_10264#2 length = 626 sequences # 1
consensus_10264#3 length = 520 sequences # 2

consensusID : consensus_10264#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1342
fasta sequence

                              [CTCGAGGGCCAAAATTCGGCACGAGGAGCTACCAAACGTCGAGCTGAATGGTCATATATCAAAATAAATATTACACATTCATATTCATCAAATGACAAGTCATCTGAATTTGAAGAGGATAATCCAACTCAGAAACTCTCACCTGAATTCCAGAAAGCTATTGCCCATGGCCCAAGTCTTTCTGAATTTATCAAACTAAGCAATAACAATCAGTCAACTAAGGAAGATTTCTTCAGTTCCCCGAGTTCAGTTAATAAATCGGGAAAAAGCCTCCGTCTTCCAGAATGGTTAAAGACTGAGATACCGTGTGGCGGTAGTGTGGCGCGTTTGCAAAAACAGTTACGTTCCCTCAA-TTTGCATACCGTTTGTGAAGAAGCTCGATGTCCTAATATTAGTGAATGTTGGACTGCGGGAAAGTCTACAGCCGCTACGGCTACAATTATGATAATGGGTGATACATGTACTAGAGGTTGTCGGTTTTGTTCTGTTAAAACTTCACCGAATCCACCACCTCTTGATCCAGACGAACCAGTGAATACTGCAGAAGCCATAAGCAAATGGGATGTAGACTATATTGTCATAACATCAGTTGATCGTGATGACTTGGGAGATGGAGGGGCTCGACACATAGCTAAAACAATTCGCC-AATAAAAGTACGTAAACCATCAA-TTATAGTTGAATGCTTAGTACCAGATTTTCGAGGGTGTACAGACTCCATTCATACAGTTGTTCGTGCTAGTCCCGAAGTATATGCGCATAATATTGAAACTGTGGAGTCACTACAACGCGTTGTGAGGGATCACCGAGCTGGTTATATTCAGTCACTTCGAAGCCTAGAGACTGCAAAAGAACGTAGTAATAGGCTTGTGTCATCCGGAGATGCCGACTTTTTAGTCGTCACAAAAT-CCAGTATTATGTTGGGTCTTGGTGAGAAAGAAAAAGAAGTAATGATAGCTCTTAAAGACTTACGTCAGGCTGGAGTTGACTGTGTAACAATTGGACAATATGTACAACCGACTAAGCGTCATCTAAAAGTTAAAGAATATATTCATCCAGATAAATTTGATTATTGGGCGAAAATTGGCAATGATTTGGGATTTTTATATACAGCTAGTGGACCATTAGTTCGATCATCATATCGAGCAGGTGAATATTATATAAAACACATTATAGATCAACGTAAACGGAAAAACATATGATACGAGATTGAACAACTGAGCACACAAATACAGTTCATATGATGAGAACTTTGGAAATAATAAACCTTAGAGTATAGAAGTAAAGTGTATATAGTCAGTCAGGTTGACTTTTCTATTCAAATTACTTTTTAAACGTTCATTTC]

[+] EMBL CD080683             [CTCGAGGGCCAAAATTCGGCACGAGGAGCTACCAAACGTCGAGCTGAATGGTCATATATCAAAATAAATATTACACATTCATATTCATCAAATGACAAGTCATCTGAATTTGAAGAGGATAATCCAACTCAGAAACTCTCACCTGAATTCCAGAAAGCTATTGCCCATGGCCCAAGTCTTTCTGAATTTATCAAACTAAGCAATAACAATCAGTCAACTAAGGAAGATTTCTTCAGTTCCCCGAGTTCAGTTAATAAATCGGGAAAAAGCCTCCGTCTTCCAGAATGGTTAAAGACTGAGATACCGTGTGGCGGTAGTGTGGCGCGTTTGCAAAAACAGTTACGTTCCCTCAATTTTGCATACCGTTTGTGAAGAAGCTCGATGTCCTAATATTAGTGAATGTTGGACTGCGGGAAAGTCTACAGCCGCTACGGCTACAATTATGATAATGGGTGATACATGTACTAGAGGTTGTCGGTTTTGTTCTGTTAAAACTTCACCGAATCCACCACCTCTTGATCCAGACGAACCAGTGAATACTGCAGAAGCCATAAGCAAATGGGATGTAGACTATATTGTCATAACATCAGTTGATCGTGATGACTTGGGAGATGGAGGGGCTCGACACATAGCTAAAACAATTCGCC AATAAAAGTACGTAAACCATCAA TTATAGTTGAATGCTTAGTACCAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD065718             [                                                                                                                      ATAATCCAACTCAGAAACTCTCACCTGAATTCCAGAAAGCTATTGCCCATGGCCCAAGTCTTTCTGAATTTATCAAACTAAGCAATAACAATCAGTCAACTAAGGAAGATTTCTTCAGTTCCCCGAGTTCAGTTAATAAATCGGGGAAAAGCCTCCGTCTTCCAGAATGGTTAAAGACTGAGATACCGTGTGGCGGTAGTGTGGCGCGTTTGCAAAAACAGTTACGTTCCCTCAA TTTGCATACCGTTTGTGAAGAAGCTCGATGTCCTAATATTAGTGAATGTTGGACTGCGGGAAAGTCTACAGCCGCTACGGCTACAATTATGATAATGGGTGATACATGTACTAGAGGTTGTCGGTTTTGTTCTGTTAAAACTTCACCGAATCCACCACCTCTTGATCCAGACGAACCAGTGAATACTGCAGAAGCCATAAGCAAATGGGATGTAGACTATATTGTCATAACATCAGTTGATCGTGATGACTTGGGAGATGGAGGGGCTCGACACATAGCTAcat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD157769             [                                                                                                                                                                                                                                                                                                                                                         TCCCTCAA TTTGCATACCGTATGTGAAGAAGCTCGATGTCCTAATATTAGTGAATGTTGGACTGCGGGAAAGTCTACAGCCGCTACGGCTACAATTATGATAATGGGTGATACATGTACTAGAGGTTGTCGGTTTTGTTCTGTTAAAACTTCACCGAATCCACCACCTCTTGATCCAGACGAACCAGTGAATACTGCAGAAGCCATAAGCAAATGGGATGTAGACTATATTGTCATAACATCAGTTGATCGTGATGACTTGGGAGATGGAGGGGCTCGACACATAGCTAAAACAATTCGCC AA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD187040             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTAGAGGTTGTCGGTTTTGTTCTGTTAAAACTTCACCGAATCCACCACCTCTTGATCCAGACGAACCAGTGAATACTGCAGAAGCCATAAGCAAATGGGATGTAGACTATATTGTCATAACATCAGTTGATCGTGATGACTTGGGAGATGGAGGGGCTCGACACATAGCTAAAACAATTCGCCAAATAAAAGTACGTAAACCATCAA TTATAGTTGAATGCTTAGTACCAGATTTTCGAGGGTGTACAGACTCCATTCATACAGTTGTTCGTGCTAGTCCCGAAGTATATGCGCATAATATTGAAACTGTGGAGTCACTACAACGCGTTGTGAGGGATCACCGAGCTGGTTATATTCAGTCACTTCGAAGCCTAGAGACTGCAAAAGAACGTAGTAATAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BG931642             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCGGTTTTGTTCTGTTAAAACTTCACCGAATCCACCACCTCTTGATCCAGACGAACCAGTGAATACTGCAGAAGCCATAAGCAAATGGGATGTAGACTATATTGTCATAACATCAGTTGATCGTGATGACTTGGGAGATGGAGGGGCTCGACACATAGCTAAAACAATTCGCCAAATAAAAGTACGTAAACCATCAA TTATAGTTGAATGCTTAGTACCAGATTTTCGAGGGTGTACAGACTCCATTCATACAGTTGTTCGTGCTAGTCCCGAAGTATATGCGCATAATATTGAAACTGTGGAGTCACTACAACGCGTTGTGAGGGATCACCGAGCTGGTTATATTCAGTCACTTCGAAGCCTAGAGACTGCAAAAGAACGTAGTAATAGGCTTGTGTCATCCGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD113991             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCCAGACGACCCAGTGAATACTGCAGAAGCCATCAGCAAATGGCATGTAGACTATATTGTCATCACATCAGTTGATCGTGATGACTTGGGAGACGGAGGGGCTCGACACATAGCTAGCACTATTCGCCAAATAAAAGTACGTAAACCATCAAGTTATAGTTGTACGTTTAGTCCCAGATTTTCGAGGGTGCACAGACTCCATTCAGCCAGTTGTTCGTGCTAGTCCCGAAGTATATGCGCATAATATTGTAAGTGTGGCGTCGCTACTACGCGTTGTGAGGGATCACCGAGCTGGTTATATTCAGTCACTTCGAAGCCTAGAGGCTGCAAAAGtg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD078533             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAGATTTTCGAGGGTGTACAGACTCCATTCATACAGTTGTTCGTGCTAGTCCCGAAGTATATGCGCATAATATTGAAACTGTGGAGTCACTACAACGCGTTGTGAGGGATCACCGAGCTGGTTATATTCAGTCACTTCGAAGCCTAGAGACTGCAAAAGAACGTAGTAATAGGCTTGTGTCATCCGGAGATGCCGACTTTTTAGTCGTCACAAAAT CCAGTATTATGTTGGGTCTTGGTGAGAAAGAAAAAGAAGTAATGATAGCTCTTAAAGACTTACGTCAGGCTGGAGTTGACTGTGTAACAATTGGACAATATGTACAACCGACTAAGCGTCATCTAAAAGTTAAAGAATATATTCATCCAGATAAATTTGATTATTGGGCGAAAATTGGCAATGATTTGGGATTTTTATATACAGCTAGTGGACCATTAGTTCGATCATCATATCGAGCAGGTGAATATTATATAAAACACATTATAGATCAACGTANACGGAAAAACATATGATACGAGATTGAACAACTGAGCACACAAATACAGTTCATATGATGAGAACTTTGGAAATAATAAACCTTAGAGTATAGAAGTAAAGTGTATATAGTCAGTCAGGTTGACTTTTCTA                            ]
[+] EMBL CD135946             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTTGTTCGTGCTAGTCCCGAAGTATATGCGCATAATATTGAAACTGTGGAGTCACTACAACGCGTTGTGAGGGATCACCGAGCTGGTTATATTCAGTCACTTCGAAGCCTAGAGACTGCAAAAGAACGTAGTAATAGGCTTGTGTCATCCGGAGATGCCGACTTTTTAGTCGTCACAAAAT CCAGTATTATGTTGGGTCTTGGTGAGAAAGAAAAAGAAGTAATGATAGCTCTTAAAGACTTACGTCAGGCTGGAGTTGACTGTGTAACAATTGGACAATATGTACAACCGACTAAGCGTCATCTAAAAGTTAAAGAATATATTCATCCAGATAAATTTGATTATTGGGCGAAAATTGGCAATGATTTGGGATTTTTATATACAGCTAGTGG                                                                                                                                                                                                                                 ]
[-] EMBL CD075841             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       aanAATCCCAGTATTATGTTGGGTCTTGGTGAGAAAGAAAAAGAAGTAATGATAGCTCTTAAAGACTTACGTCAGGCTGGAGTTGACTGTGTAACAATTGGACAATATGTACAACCGACTAAGCGTCATCTAAAAGTTAAAGAATATATTCATCCAGATAAATTTGATTATTGGGCGAAAATTGGCAATGATTTGGGATTTTTATATACAGCTAGTGGACCATTAGTTCGATCATCATATCGAGCAGGTGAATATTATATAAAACACATTATAGATCAACGTAAACGGAAAAACATATGATACGAGATTGAACAACTGAGCACACAAATACAGTTCATATGATGAGAACTTTGGAAATAATAAACCTTAGAGTATAGAAGTAAAGTGTATATAGTCAGTCAGGTTGACTTTTCTATTCAAATTACTTTTTAAACGTTCATTTC]
[-] EMBL CD073002             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGTCAGGCTGGAGTTGACTGTGTAACAATTGGACAATATGTACAACCGACTAAGCGTCATCTAAAAGTTAAAGAATATATTCATCCAGATAAATTTGATTATTGGGCGAAAATTGGCAATGATTTGGGATTTTTATATACAGCTAGTGGACCATTAGTTCGATCATCATATCGAGCAGGTGAATATTATATAAAACACATTATAGATCAACGTAAACGGAAAAACATATGATACGAGATTGAACAACTGAGCACACAAATACAGTTCATATGATGAGAACTTTGGAAATAATAAACCTTAGAGTATAGAAGTAAAGTGTATATAGTCAGTCAGGTTGACTTTTCTATTCAAATTACTTTTTAAACGTTCATTTC]




>consensus_10264#0
CTCGAGGGCCAAAATTCGGCACGAGGAGCTACCAAACGTCGAGCTGAATGGTCATATATC
AAAATAAATATTACACATTCATATTCATCAAATGACAAGTCATCTGAATTTGAAGAGGAT
AATCCAACTCAGAAACTCTCACCTGAATTCCAGAAAGCTATTGCCCATGGCCCAAGTCTT
TCTGAATTTATCAAACTAAGCAATAACAATCAGTCAACTAAGGAAGATTTCTTCAGTTCC
CCGAGTTCAGTTAATAAATCGGGAAAAAGCCTCCGTCTTCCAGAATGGTTAAAGACTGAG
ATACCGTGTGGCGGTAGTGTGGCGCGTTTGCAAAAACAGTTACGTTCCCTCAATTTGCAT
ACCGTTTGTGAAGAAGCTCGATGTCCTAATATTAGTGAATGTTGGACTGCGGGAAAGTCT
ACAGCCGCTACGGCTACAATTATGATAATGGGTGATACATGTACTAGAGGTTGTCGGTTT
TGTTCTGTTAAAACTTCACCGAATCCACCACCTCTTGATCCAGACGAACCAGTGAATACT
GCAGAAGCCATAAGCAAATGGGATGTAGACTATATTGTCATAACATCAGTTGATCGTGAT
GACTTGGGAGATGGAGGGGCTCGACACATAGCTAAAACAATTCGCCAATAAAAGTACGTA
AACCATCAATTATAGTTGAATGCTTAGTACCAGATTTTCGAGGGTGTACAGACTCCATTC
ATACAGTTGTTCGTGCTAGTCCCGAAGTATATGCGCATAATATTGAAACTGTGGAGTCAC
TACAACGCGTTGTGAGGGATCACCGAGCTGGTTATATTCAGTCACTTCGAAGCCTAGAGA
CTGCAAAAGAACGTAGTAATAGGCTTGTGTCATCCGGAGATGCCGACTTTTTAGTCGTCA
CAAAATCCAGTATTATGTTGGGTCTTGGTGAGAAAGAAAAAGAAGTAATGATAGCTCTTA
AAGACTTACGTCAGGCTGGAGTTGACTGTGTAACAATTGGACAATATGTACAACCGACTA
AGCGTCATCTAAAAGTTAAAGAATATATTCATCCAGATAAATTTGATTATTGGGCGAAAA
TTGGCAATGATTTGGGATTTTTATATACAGCTAGTGGACCATTAGTTCGATCATCATATC
GAGCAGGTGAATATTATATAAAACACATTATAGATCAACGTAAACGGAAAAACATATGAT
ACGAGATTGAACAACTGAGCACACAAATACAGTTCATATGATGAGAACTTTGGAAATAAT
AAACCTTAGAGTATAGAAGTAAAGTGTATATAGTCAGTCAGGTTGACTTTTCTATTCAAA
TTACTTTTTAAACGTTCATTTC

consensusID : consensus_10264#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 646
fasta sequence

                              [CCTTCTACAGTTGTTCGTGCTAGTCCTGAAGTATATGCGCATAATATTGAAACTGTGGAGTCACTACAACGGTGAGTGTCTTTAATCAAAAATATGATTACTCACATACACCAGCTATATATATATATATATATATATATAAAGATGACCTACAAGCGGCTCTTATAAACAATCGTTTACTGTCGACCATTCTTCCGGTTCTGGACTATTCGTTATTTAATTAATGAATTGTCACTACAGGATTATTATGCAAAGCAGTTAAGTTTAATACTGCCTTTTTTGGGACTAAACTGCTTTCCAAAATATATCGCATGTTACTATGGGATCGTATTTTTGAAGATTGAAGAAATGTGTAACTATAATAGCTTAATCGTTAATGCAATATAAGGAGTTTTTCAGTTAAACTGCTAGTCTAACTGATATCTTAGCATCAAAACTAAATAAAAGGAATAATCAACCCAACGTTATCTGTTTGTATAATGTATTCAGTTTTCTTTATGATTATTGAGTGTTTTATATAATTTTATTCCAAGAACTTTTAAATTCTTTTAGCGTTGTGAGGGATCACCGAGCTGGTTATATTCAGTCACTTCGAAGCCTAGAGACTGCANAAGAACGTAGTAATAGGGCTTGTGTCATCCGGAGA]

[+] EMBL CD082230             [CCTTCTACAGTTGTTCGTGCTAGTCCTGAAGTATATGCGCATAATATTGAAACTGTGGAGTCACTACAACGGTGAGTGTCTTTAATCAAAAATATGATTACTCACATACACCAGCTATATATATATATATATATATATATAAAGATGACCTACAAGCGGCTCTTATAAACAATCGTTTACTGTCGACCATTCTTCCGGTTCTGGACTATTCGTTATTTAATTAATGAATTGTCACTACAGGATTATTATGCAAAGCAGTTAAGTTTAATACTGCCTTTTTTGGGACTAAACTGCTTTCCAAAATATATCGCATGTTACTATGGGATCGTATTTTTGAAGATTGAAGAAATGTGTAACTATAATAGCTTAATCGTTAATGCAATATAAGGAGTTTTTCAGTTAAACTGCTAGTCTAACTGATATCTTAGCATCAAAACTAAATAAAAGGAATAATCAACCCAACGTTATCTGTTTGTATAATGTATTCAGTTTTCTTTATGATTATTGAGTGTTTTATATAATTTTATTCCAAGAACTTTTAAATTCTTTTAGCGTTGTGAGGGATCACCGAGCTGGTTATATTCAGTCACTTCGAAGCCTAGAGACTGCANAAGAACGTAGTAATAGGGCTTGTGTCATCCGGAGA]




>consensus_10264#1
CCTTCTACAGTTGTTCGTGCTAGTCCTGAAGTATATGCGCATAATATTGAAACTGTGGAG
TCACTACAACGGTGAGTGTCTTTAATCAAAAATATGATTACTCACATACACCAGCTATAT
ATATATATATATATATATATAAAGATGACCTACAAGCGGCTCTTATAAACAATCGTTTAC
TGTCGACCATTCTTCCGGTTCTGGACTATTCGTTATTTAATTAATGAATTGTCACTACAG
GATTATTATGCAAAGCAGTTAAGTTTAATACTGCCTTTTTTGGGACTAAACTGCTTTCCA
AAATATATCGCATGTTACTATGGGATCGTATTTTTGAAGATTGAAGAAATGTGTAACTAT
AATAGCTTAATCGTTAATGCAATATAAGGAGTTTTTCAGTTAAACTGCTAGTCTAACTGA
TATCTTAGCATCAAAACTAAATAAAAGGAATAATCAACCCAACGTTATCTGTTTGTATAA
TGTATTCAGTTTTCTTTATGATTATTGAGTGTTTTATATAATTTTATTCCAAGAACTTTT
AAATTCTTTTAGCGTTGTGAGGGATCACCGAGCTGGTTATATTCAGTCACTTCGAAGCCT
AGAGACTGCANAAGAACGTAGTAATAGGGCTTGTGTCATCCGGAGA

consensusID : consensus_10264#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 626
fasta sequence

                              [CACGTTTTCGTATCGTTCTTACCTGCGAAGAACACATAACGGTGTGCCTTGACCCGAAAATATCAGTAACATCTAGCCGGAACAATGGGAAACTTCAAGACAAATTTGTTGTCCGTTGCTTAACGACTGTATATACGAAGGTATCTAAGGGAAAATAATTTGGAGTTGGACATAGTTAGCGAGCGTATACTCTACAAAGAATCATCAATCACAGAAGTCCTGTTACTTTATGTGCTTTTGGCAGGTATAGGGGTTAATGCACAAAAGCAGTCCGTACGTTTCCTACTGATAAATGGGTTTGTTGTTACCAAGAGGTTCGTATGTGTTTCCGGTATTGGCAAGTGTATCGGCAGCTACCAAACGTCGAGCTGAATGGTCATATATCAAAATAAATATTACACATTCATATTCATCAAATGACAAGTCATCTGAATTTGAAGAGGATAATCCAACTCAGAAACTCTCACCTGAATTCCAGAAAGCTATTGCCCATGGCCCAAGTCTTTCTGAATTTATCAAACTAAGCAATAACAATCAGTCAACTAAGGAAGATTTCTTCAGTTGCCCGAGTTCAGTTAATAAATCGGGAAAAAGGAAGCACTAATTTTAAGCATAAGGAGAGACAT]

[+] EMBL AI975938             [CACGTTTTCGTATCGTTCTTACCTGCGAAGAACACATAACGGTGTGCCTTGACCCGAAAATATCAGTAACATCTAGCCGGAACAATGGGAAACTTCAAGACAAATTTGTTGTCCGTTGCTTAACGACTGTATATACGAAGGTATCTAAGGGAAAATAATTTGGAGTTGGACATAGTTAGCGAGCGTATACTCTACAAAGAATCATCAATCACAGAAGTCCTGTTACTTTATGTGCTTTTGGCAGGTATAGGGGTTAATGCACAAAAGCAGTCCGTACGTTTCCTACTGATAAATGGGTTTGTTGTTACCAAGAGGTTCGTATGTGTTTCCGGTATTGGCAAGTGTATCGGCAGCTACCAAACGTCGAGCTGAATGGTCATATATCAAAATAAATATTACACATTCATATTCATCAAATGACAAGTCATCTGAATTTGAAGAGGATAATCCAACTCAGAAACTCTCACCTGAATTCCAGAAAGCTATTGCCCATGGCCCAAGTCTTTCTGAATTTATCAAACTAAGCAATAACAATCAGTCAACTAAGGAAGATTTCTTCAGTTGCCCGAGTTCAGTTAATAAATCGGGAAAAAGGAAGCACTAATTTTAAGCATAAGGAGAGACAT]




>consensus_10264#2
CACGTTTTCGTATCGTTCTTACCTGCGAAGAACACATAACGGTGTGCCTTGACCCGAAAA
TATCAGTAACATCTAGCCGGAACAATGGGAAACTTCAAGACAAATTTGTTGTCCGTTGCT
TAACGACTGTATATACGAAGGTATCTAAGGGAAAATAATTTGGAGTTGGACATAGTTAGC
GAGCGTATACTCTACAAAGAATCATCAATCACAGAAGTCCTGTTACTTTATGTGCTTTTG
GCAGGTATAGGGGTTAATGCACAAAAGCAGTCCGTACGTTTCCTACTGATAAATGGGTTT
GTTGTTACCAAGAGGTTCGTATGTGTTTCCGGTATTGGCAAGTGTATCGGCAGCTACCAA
ACGTCGAGCTGAATGGTCATATATCAAAATAAATATTACACATTCATATTCATCAAATGA
CAAGTCATCTGAATTTGAAGAGGATAATCCAACTCAGAAACTCTCACCTGAATTCCAGAA
AGCTATTGCCCATGGCCCAAGTCTTTCTGAATTTATCAAACTAAGCAATAACAATCAGTC
AACTAAGGAAGATTTCTTCAGTTGCCCGAGTTCAGTTAATAAATCGGGAAAAAGGAAGCA
CTAATTTTAAGCATAAGGAGAGACAT

consensusID : consensus_10264#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 520
fasta sequence

                              [CTNNNNACTGGAAAACACATAACGGTGTGCCTTGACCCGAAAATATCAGTAACATCTAGCCGGAACAATGGGAAACTTCAAGACAAATTTGTTGTCCGTTGCTTAACGNCTGTATATACGAAGTTATAGGGTTAATGCGCAAAAGCAGTACGTACGTTTCCTACTGATAAATGAGTTTGTTGTTACCAAAAGGTTCGTATGTGTTTCCGGTATTGGCAAGTGTATCGGCAGCCTNCCCAACGTCGAGCTGAATGGTCATATATCAAAATAAATATTACACATTCATATTCATCAAATGACAAGTCATCTGAATTTGAAGAGGATAATCCAACTCAGAAACTCTCACCTGAATTCCAGAAAGCTATTGCCCATGGCCCAAGTCTTTCTGAATTTATCAAACTAAGCAATAACAATCAGTCAACTAAGGAAGATTTCTTCAGTTCCCCGAGTTCAGTTAATAAATCGGGAAAAAGCCTCCGTCTTCCAGAATGGTTAAAGACTGAGATACCGTGTGGTGGTA]

[-] EMBL CD169246             [CTNNNNACTGGAAAACACATAACGGTGTGCCTTGACCCGAAAATATCAGTAACATCTAGCCGGAACAATGGGAAACTTCAAGACAAATTTGTTGTCCGTTGCTTAACGNCTGTATATACGAAGTTATAGGGTTAATGCGCAAAAGCAGTACGTACGTTTCCTACTGATAAATGAGTTTGTTGTTACCAAAAGGTTCGTATGTGTTTCCGGTATTGGCAAGTGTATCGGCAGCCTNCCCAACGTCGAGCTGAATGGTCATATATCAAAATAAATATTACACATTCATATTCATCAAATGACAAGTCATCTGAATTTGAAGAGGATAATCCAACTCAGAAACTCTCACCTGAATTCCAGAA                                                                                                                                                                 ]
[+] EMBL CD113855             [                                                                                       TTTGTTGTCCGTTGCTTAACGACTGTATATACGAAGTTATAGGGTTAATGCGCAAAAGCAGTACGTACGTTTCCTACTGATAAATGGGTTTGTTGTTACCAAGAGGTTCGTATGTGTTTCCGGTATTGGCAAGTGTATCGGCAG CTACCAAACGTCGAGCTGAATGGTCATATATCAAAATAAATATTACACATTCATATTCATCAAATGACAAGTCATCTGAATTTGAAGAGGATAATCCAACTCAGAAACTCTCACCTGAATTCCAGAAAGCTATTGCCCATGGCCCAAGTCTTTCTGAATTTATCAAACTAAGCAATAACAATCAGTCAACTAAGGAAGATTTCTTCAGTTCCCCGAGTTCAGTTAATAAATCGGGAAAAAGCCTCCGTCTTCCAGAATGGTTAAAGACTGAGATACCGTGTGGTGGTA]




>consensus_10264#3
CTNNNNACTGGAAAACACATAACGGTGTGCCTTGACCCGAAAATATCAGTAACATCTAGC
CGGAACAATGGGAAACTTCAAGACAAATTTGTTGTCCGTTGCTTAACGNCTGTATATACG
AAGTTATAGGGTTAATGCGCAAAAGCAGTACGTACGTTTCCTACTGATAAATGAGTTTGT
TGTTACCAAAAGGTTCGTATGTGTTTCCGGTATTGGCAAGTGTATCGGCAGCCTNCCCAA
CGTCGAGCTGAATGGTCATATATCAAAATAAATATTACACATTCATATTCATCAAATGAC
AAGTCATCTGAATTTGAAGAGGATAATCCAACTCAGAAACTCTCACCTGAATTCCAGAAA
GCTATTGCCCATGGCCCAAGTCTTTCTGAATTTATCAAACTAAGCAATAACAATCAGTCA
ACTAAGGAAGATTTCTTCAGTTCCCCGAGTTCAGTTAATAAATCGGGAAAAAGCCTCCGT
CTTCCAGAATGGTTAAAGACTGAGATACCGTGTGGTGGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10264#2      CACGTTTTCGTATCGTTCTTACCTGCGAAGAACACATAACGGTGTGCCTTGACCCGAAAA 60
consensus_10264#3      -----------------CTNNNNACTGGAAAACACATAACGGTGTGCCTTGACCCGAAAA 43
consensus_10264#0      ------------------------------------------------------------
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      TATCAGTAACATCTAGCCGGAACAATGGGAAACTTCAAGACAAATTTGTTGTCCGTTGCT 120
consensus_10264#3      TATCAGTAACATCTAGCCGGAACAATGGGAAACTTCAAGACAAATTTGTTGTCCGTTGCT 103
consensus_10264#0      ------------------------------------------------------------
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      TAACGACTGTATATACGAAGGTATCTAAGGGAAAATAATTTGGAGTTGGACATAGTTAGC 180
consensus_10264#3      TAACGNCTGTATATACGAAGTTAT------------------------------------ 127
consensus_10264#0      ------------------------------------------------------------
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      GAGCGTATACTCTACAAAGAATCATCAATCACAGAAGTCCTGTTACTTTATGTGCTTTTG 240
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      ------------------------------------------------------------
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      GCAGGTATAGGGGTTAATGCACAAAAGCAGTCCGTACGTTTCCTACTGATAAATGGGTTT 300
consensus_10264#3      ---------AGGGTTAATGCGCAAAAGCAGTACGTACGTTTCCTACTGATAAATGAGTTT 178
consensus_10264#0      ------------------------------------------------------------
consensus_10264#1      ------------------------------------------------------CCTTCT 6
                                                                                   

consensus_10264#2      GTTGTTACCAAGAGGTTCGTATGTGTTTCCGGTATTGGCAAGTGTATCGGCAGC-TACCA 359
consensus_10264#3      GTTGTTACCAAAAGGTTCGTATGTGTTTCCGGTATTGGCAAGTGTATCGGCAGCCTNCCC 238
consensus_10264#0      --------------------------CTCGAGGGCCAAAATTCGGCACGAGGAGCTACCA 34
consensus_10264#1      ACAGTTGTTCGTGCTAGTCCTGAAGTATATGCGCATAATATTGAAACTGTGGAGTCACTA 66
                                                  *           *        *        *  

consensus_10264#2      -AACGTCGAGCTGAATGGTCATATATCAAAATAAATATTACACATTCATATTCATCAAAT 418
consensus_10264#3      -AACGTCGAGCTGAATGGTCATATATCAAAATAAATATTACACATTCATATTCATCAAAT 297
consensus_10264#0      -AACGTCGAGCTGAATGGTCATATATCAAAATAAATATTACACATTCATATTCATCAAAT 93
consensus_10264#1      CAACGGTGAGT------GTCTTTAATCAAAAATATGATTACTCACATACACCAGCTATAT 120
                        ****  ***       *** *  *******  *  ***** **   * *      * **

consensus_10264#2      GACAAGTCATCTGAATTTGAAGAGGATAATCCAACTCAGAAACTCTCACCTGAATTCCAG 478
consensus_10264#3      GACAAGTCATCTGAATTTGAAGAGGATAATCCAACTCAGAAACTCTCACCTGAATTCCAG 357
consensus_10264#0      GACAAGTCATCTGAATTTGAAGAGGATAATCCAACTCAGAAACTCTCACCTGAATTCCAG 153
consensus_10264#1      ATATATATATATATATATATAAAG-ATGACCTA--CAAGCGGCTCTTA--TAAACAATCG 175
                           *   ** *  ** *  * ** ** * * *    **   **** *  * **     *

consensus_10264#2      AAAGCTATTGCCCATGGCCCAAGTCTTTCTGAATTTATCAAACTAAGCAATAACAATCAG 538
consensus_10264#3      AAAGCTATTGCCCATGGCCCAAGTCTTTCTGAATTTATCAAACTAAGCAATAACAATCAG 417
consensus_10264#0      AAAGCTATTGCCCATGGCCCAAGTCTTTCTGAATTTATCAAACTAAGCAATAACAATCAG 213
consensus_10264#1      TTTACTGTCGACCATTCTTCCGGTTCTGGACTATTCGTTAT-TTAATTAATGA--ATT-G 231
                           ** * * ****    *  **  *     ***  * *   ***  *** *  **  *

consensus_10264#2      TCAACTAAGGAAGATTTCTTCAGTTGCCCGAGTTCAGT--TAATAAATCGGGAAAAAGGA 596
consensus_10264#3      TCAACTAAGGAAGATTTCTTCAGTTCCCCGAGTTCAGT--TAATAAATCGGGAAAAAGCC 475
consensus_10264#0      TCAACTAAGGAAGATTTCTTCAGTTCCCCGAGTTCAGT--TAATAAATCGGGAAAAAGCC 271
consensus_10264#1      TCACTACAGGATTATTATGCAAAGCAGTTAAGTTTAATACTGCCTTTTTTGGGACTAAAC 291
                       ***    ****  ***     *        **** * *  *      *  ** *  *   

consensus_10264#2      AGCACTAATTTTAA-GCATAAGGAGAGACAT----------------------------- 626
consensus_10264#3      TCCGTCTTCCAGAATGGTTAAAGACTGAGATACCGTGTGGTGGTA--------------- 520
consensus_10264#0      TCCGTCTTCCAGAATGGTTAAAGACTGAGATACCGTGTGGCGGTAGTGTGGCGCGTTTGC 331
consensus_10264#1      T--GCTTTCCAAAA----TATATCGCATGTTACTATGGGATCGTATTTTTGAAGATT--- 342
                                   **    **          *                             

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      AAAAACAGTTACGTTCCCTCAATTTGCATACCGTTTGTGAAGAAGCTCGATGTCCTAATA 391
consensus_10264#1      --GAAGAAATGTGTAACTATAATAGCTTAATCGTTAATGCAATATAAGGAGTTTTTCA-- 398
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      TTAGTGAATGTTGGACTGCGGGAAAGTCTACAGCCGCTACGGCTACAATTATGATAATGG 451
consensus_10264#1      ---------GTTAAACTGCTAGTCTAACTGATATCTTAGCATCAAAACTAAATAAAAGGA 449
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      GTGATACATGTACTAGAGGTTGTCGGTTTTGTTCTGTTAAAACTTCACCGAATCCACCAC 511
consensus_10264#1      ATAATCAACCCAACGTTATCTGTTTGTATAATGTATTCAGTTTTCTTTATGATTATTGAG 509
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      CTCTTGATCCAGACGAACCAGTGAATACTGCAGAAGCCATAAGCAAATGGGATGTAGACT 571
consensus_10264#1      TGTTTTATATAATTTTATTCCAAGAACTTTTAAATTCTTTTAGCGTTGTGAGGGATCACC 569
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      ATATTGTCATAACATCAGTTGATCGTGATGACTTGGGA--GATGGAGGGGCTCGACACAT 629
consensus_10264#1      GAGCTG--GTTATATTCAGTCACTTCGAAGCCTAGAGACTGCANAAGAACGTAGTAATAG 627
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      AGCTAAAACAATTCGCCAATAAAAGTACGTAAACCATCAATTATAGTTGAATGCTTAGTA 689
consensus_10264#1      GGCTTGTGTCATCCGGAGA----------------------------------------- 646
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      CCAGATTTTCGAGGGTGTACAGACTCCATTCATACAGTTGTTCGTGCTAGTCCCGAAGTA 749
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      TATGCGCATAATATTGAAACTGTGGAGTCACTACAACGCGTTGTGAGGGATCACCGAGCT 809
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      GGTTATATTCAGTCACTTCGAAGCCTAGAGACTGCAAAAGAACGTAGTAATAGGCTTGTG 869
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      TCATCCGGAGATGCCGACTTTTTAGTCGTCACAAAATCCAGTATTATGTTGGGTCTTGGT 929
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      GAGAAAGAAAAAGAAGTAATGATAGCTCTTAAAGACTTACGTCAGGCTGGAGTTGACTGT 989
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      GTAACAATTGGACAATATGTACAACCGACTAAGCGTCATCTAAAAGTTAAAGAATATATT 1049
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      CATCCAGATAAATTTGATTATTGGGCGAAAATTGGCAATGATTTGGGATTTTTATATACA 1109
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      GCTAGTGGACCATTAGTTCGATCATCATATCGAGCAGGTGAATATTATATAAAACACATT 1169
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      ATAGATCAACGTAAACGGAAAAACATATGATACGAGATTGAACAACTGAGCACACAAATA 1229
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      ------------------------------------------------------------
consensus_10264#3      ------------------------------------------------------------
consensus_10264#0      CAGTTCATATGATGAGAACTTTGGAAATAATAAACCTTAGAGTATAGAAGTAAAGTGTAT 1289
consensus_10264#1      ------------------------------------------------------------
                                                                                   

consensus_10264#2      -----------------------------------------------------
consensus_10264#3      -----------------------------------------------------
consensus_10264#0      ATAGTCAGTCAGGTTGACTTTTCTATTCAAATTACTTTTTAAACGTTCATTTC 1342
consensus_10264#1      -----------------------------------------------------