These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10266#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1651 fasta sequence [CGAAACCGGATTTTCATTTGGGAAGCCTGCAACCACTTTTGCTTTTGCATTTGGGCCGTCTCCTTTCGGAACATCTGCTGGGACAAAACCAACATTTGGAGTTAGCACGTCCACAACATCACTATTTTCTCCGGCTGTCGCATCGAGTTCCAATACTGCTGTATGCAGCTCTTCACTCCTTCAGAACTCTCCATCTTTGTCCTTGACATCTACTTCTGGATTCGGTACAGTCGCAACTACTTCAAATGCTTTTGGTTTGTCATCCTTCGCTAGCTTAGCAAAGCCATCTACAACGGTATCTACTTTTGGTACTTCTAGCATCACTGGTTTGGGAACAAACTCAAATCTCACACCAACCTCACAATCTGCTCTTAATCAGCCATCAGTTAATCCTTTACCCAGCCTCTTAAAACCGGCTACTACGACTAGTAATGTTGGAAGTTCATTCACTTTCGGACTGACTACTGCCATTTCTACTC-AAAGTACAGTAACTCCTCCAATTAGTTTTGGCACTCTTTCTTCGACGACTGTGTCTACTGGGGCTCCCACAGCCTCCATTGTAAATGTTCATGCAAGTCAACCGGCCATACCTAGTAGTATTGGTTTTGGTGTATCTTCAGCCTCACTATCATCCTCAGCGATCACATCAACAGCAGCAACAATAGCAATGACATCTTACAACTTTGGGAACCCTAGTCTCTCCACATTGGCTAAATCAGCAGCGGCTTCCGGGTTCGGAACGTCATCATTGGGGATTGCAACTCGAACACTAGGTGAAACAGCCACTACTGCAGCAGCAATAACTACATCATTATGCGCTACCATCGCGACAACAACCACTTCTATTCCGTCCGCCACTACTACATCTAGTGTATCTGTCACATCCTCTCAAACTCTTACTTACAATCAGTTGGAAGAATTGGTCAATAAATGGACTCTTGAGCTTGAGGAACAAGAACGATATTTCTTCGATGAAGCAGATCGTATTAATCAATGGGATCAAACCTTGATTTGTAACGCAGAAAATATAACAGCTATGTACAAAAAGGTAGAAATGTGTCAATGTGAACAGAGTCGTCTTGAGCAGGAATTAGATTTTATTGAAGGTCAACAACGTGAATTGGAAAGTTTACTGGAACCACTAGAACGTGCAGTGAATGAATTACCACCCGGTCAGTTACATTCAGATTATGAACGTGAAGCTATATTTCAATTGGCTACAAATGTCGACTTAGAATTAGGTCAACTATTGACTGATTTACGTGAAATAGCCGATCAAACAAACACCACTACAATGAATGTTACTACTGGTTTTAATTCATCGGATAATAGTACAACTACTACGAATGCCCCTAAGGAGAATACTATGATTAATGGTAATAATAAACTAACTTCATCAAATAACGGGGATATTATGAATCAAATTACGCGTATTTTGAATTGTCATATGCATTCACTCAATTGGATTCCCCATAACACACAAGAAATAATGGATCGTTTAAAGGTGTTGAATGGTGTTTCATAACAAAGTGATTCCAGTGTAGATTGTCCATTGTCAATAATGAATGAATATATATATATATATATATATATATATATATATATATATATATGATTACGATTCTTATTGTTATTTTAACAATAAAGACTA] [+] EMBL CD082276 [CGAAACCGGATTTTCATTTGGGAAGCCTGCAACCACTTTTGCTTTTGCATTTGGGCCGTCTCCTTTCGGAACATCTGCTGGGACAAAACCAACATTTGGAGTTAGCACGTCCACAACATCACTATTTTCTCCGGCTGTCGCATCGAGTTCCAATACTGCTGTATGCAGCTCTTCACTCCTTCAGAACTCTCCATCTTTGTCCTTGACATCTACTTCTGGATTCGGTACAGTCGCAACTACTTCAAATGCTTTTGGTTTGTCATCCTTCGCTAGCTTAGCAAAGCCATCTACAACGGTATCTACTTTTGGTACTTCTAGCATCACTGGTTTGGGAACAAACTCAAATCTCACACCAACCTCACAATCTGCTCTTAATCAGCCATCAGTTAATCCTTTACCCAGCCTCTTAAAACCGGCTACTACGACTAGTAATGTTGGAAGTTCATTCACTTTCGGACTGACTACTGCCATTTCTACTC AAAGTACAGTAACTCCTCCAATTAGTTTTGGCACTCTTTCTTCGACGACTGTGTCTACTGGGGCTCCCACAGCCTCCATTGTAAATGTTCATGCAAGTCAACCGGCCATACCTAGTAGTATTGGTTNTGGTGTATCTTCAGCCTCACTATCATCCTCAGCGATCACATCAACAGCAGCAACAATAGCAATGACATCTTACAACTNTGGGA ] [-] EMBL CD064810 [ GATTTTCATTTGGGAAGCCTGCAACCACTAGTGCTTTTGCATTTGGGTCGTCTCCTTTCGGAACATCTGCTGGGACAAAACCAACATTTGGAGTTAGCACGTCCACAACATCACTATTTTCTCCGGCTGTCGCATCGAGTTCCAATACTGCTGTATGCAGCTCTTCACTCCTTCAGAACTCTCCATCTTTGTCCTTGACATCTACTTCTGGATTCGGTACAGTCGCAACTACTTCAAATGCTTTTGGTTTGTCATCCTTCGCTAGCTTAGCAAAGCCATCTACAACGGTATCTACTTTTGGTACTTCTAGCATCACTGGTTTGGGAACAAACTCAAATCTC ] [-] EMBL CD153328 [ CAACATTT GAGTTAGCACGTCCACAACATCACTATTTTCTCCGGCTGTCGCATCGAGTTCCAATACTGCTGTATGCAGCTCTTCACTCCTTCAGAACTCTCCATCTTTGTCCTTGACATCTACTTCTGGATTCGGTACAGTCGCAACTACTTCAAATGCTTTTGGTTTGTCATCCTTCGCTAGCTTAGCAAAGCCATCTACAACGGTATCTACTTTTGGTACTTCTAGCATCACTGGTTTGGGAACAAACTCAAATCTCACACCAACCTCACAATCTGCTCTTAATCAGCCATCAGTTAATCCTTTACCCAGCCTCTTAAAACCGGCTGCTACGACTAGTAATGTTGGAAGTTCATTCACTTTCGGACTGACTACTGCCATTTCTACTC AAAGTACAGTAACTCCTCCAATTAGTTTTGGCACTCTTTCTTCGACGACTGTGTCTACTGGGGCTCCCACAGCCTCCATTGTAAATGTTCATGCAAGTCAACCGGCCATACCTAGTAGTATTGGTTTTGGTGTATCTTCAGCCTCACTATCATCCTCAG ] [-] EMBL CD153384 [ CATTTGGAGTTAGCACGTCCACAACATCACTATTTTCTCCGGCTGTGGCATCGAGTTCCAATACTGCTGTATGCAGCTCTTCACTCCTTCAGAACTCTCCATCTTTGTCCTTGACATCTACTTCTGGATTCGGTACAGTCGCAACGACTTCAAATGCTTTTGGTTTGTCATCCTTCGCTAGCTTAGCAAAGCCATCTACAACGGTATCTACTTTTGGTACTTCTAGCATCAGTGGTTTGGGAACAAACTCAAATCTCACACCAACCTCACAATCTGCTCTTAATCAGCCATCAGTTAATCCTTTACCCAGCCTCTTAAAACCGGCTACTACGACTAGTAATGTTGGAAGTTCATTCACTTTCGGACTGACTACTGCCATTTCTACTCAAAAGTACAGTAACTCCTCCAATTAGTTTTGGCACTCTTTCTTCGACGACTGTGTCTACTGGGGCTCCCACAGCCTCCATTGTAAATGTTCATGCAAGTCAACCGGCCATACCTAGTAGTATTGGTTTTGGTGTATCTTCAGCCTCACTATCATCGTCAG ] [-] EMBL BG932570 [ CAACATCACTATTTTCTCCGGCTGTCGCATCGAGTTCCAATACTGCTGTATGCAGCTCTTCACTCCTTCAGAACTCTCCATCTTTGTCCTTGACATCTACTTCTGGATTCGGTACAGTCGCAACTACTTCAAATGCTTTTGGTTTGTCATCCTTCGCTAGCTTAGCAAAGCCATCTACAACGGTATCTACTTTTGGTACTTCTAGCATCACTGGTTTGGGAACAAACTCAAATCTCACACCAACCTCACAATCTGCTCTTAATCAGCCATCAGTTAATCCTTTACCCAGCCTCTTAAAACCGGCTACTACGACTAGTAATGTTGGAAGTTCATTCACTTTCGGACTGACTACTc ] [-] EMBL CD186753 [ CAAACTCAAATCTCACACCAACCTCACAATCTGCTCTTAATCAGCCATCAGTTAATCCTTTACCCAGCCTCTTAAAACCGGCTACTACGACTAGTAATGTTGGAAGTTCATTCACTTTCGGACTGACTACTGCCATTTCTACTC AAAGTACAGTAACTCCTCCAATTAGTTTTGGCACTCTTTCCTCGACGACTGTGTCTACTGGGGCTCCCACAGCCTCCATTGTAAATGTTCATGCAAGTCAACCGGCCATACCTAGTAGTATTGGTTTTGGTGTATCTTCAGCCTCAC ] [+] EMBL CD187336 [ CAAACTCAAATCTCACACCAACCTCACAATCTGCTCTTAATCAGCCATCAGTTAATCCTTTACCCAGCCTCTTAAAACCGGCTACTACGACTAGTAATGTTGGAAGTTCATTCACTTTCGGACTGACTACTGCCATTTCTACTC AAAGTACAGTAACTCCTCCAATTAGTTTTGGCACTCTTTCTTCGACGACTGTGTCTACTGGGGCTCCCACAGCCTCCATTGTAAATGTTCATGCAAGTCAACCGGCCATACCTAGTAGTATTGGTTTTGGTGTATCTTCAGCCTCA ] [+] EMBL CD146676 [ TCTTAATCAGCCATCAGTTAATCCTTTACCCAGCCTCTTAAAACCGGCTACTACGACTAGTAATGTTGGAAGTTCATTCACTTTCGGACTGACTACTGCCATTTCTACTC AAAGTACAGTAACTCCTCCAATTAGTTTTGGCACTCTTTCTTCGACGACTGTGTCTACTGGGGCTCCCACAGCCTCCATTGTAAATGTTCATGCAAGTCAACCGGCCATACCTAGTAGTATTGGCTTTGGTGTATCTTCAGCCTCACTATCATCCTCAGTGAT ] [-] EMBL CD132461 [ GCCATTTCTACTC AAAGTACAGTAACTCCTCCAATTAGTTTTGGCACTCTTTCTTCGACGACTGTGTCTACTGGGGCTCCCACAGCCTCCATTGTAAATGTTCATa ] [+] EMBL CD157048 [ CAACCGGCCATACCTAGTAGTATTGGTTTTGGTGTATCTTCAGCCTCACTATCATCCTCAGCGACCACATCAACAGCAGCAACAATAGCAATGACATCTTACAACTTTGGGAACCCTAGTCTCTCCACATTGGCTAAATCAGCAGCGGCTTCCGGGTTCGGAACGTCATCATTGGGGATTGCAACTCGAACACTGGGTGAAACAGCCACTACTGCAGCAGCAATAACTACATCATTATGCGCTACCATCGCGACAACAACCACTTCTATTCCGTCCGCCGCTACTACATCTAGTGTATCTGTCACATCCTCTCAAACTCTTACTTACAATCAGTTGGAAGAATTGGTCAATANATGGACTCTTGAGCTTGAGGAACAAG ] [-] EMBL CD112737 [ gnCCGTACCTAGTAGTATTGTTTTTGGTGTATCTTCAGCCTCACTATCATCCTCAGCGATCACATCAACAGCAGCAACAATAGCAATGCCATCTTACAACTTTGGGAACCCTAGTCTCTCCACATTGGCTAAATCAGCAGCGGCTTCCGGGTTCGGAACGTCATCATTGGGGATTGCAACTCGAACACTAGGTGAAACAGCCACTACTGCAGCAGCAATAACTACATCATTATGCGCTACCATCGCGACAACAACCACTTCTATTCCGTCCGCCACTACTACATCTAGTGTATCTGTCACATCCTCTCAAACTCTTACTTACAATCAGTTGGAAGAATTGGTCAATAAATGGACTCTTGAGCTTGAGGAACAAGAACGATATTTCTTCGATGAAGCAGATCGTATTAATCAATGGGATCAAACCTTGATTTGTAACGCAGAA ] [+] EMBL CD153362 [ CCTCACTATCATCCTCAGCGATCACATCAACAGCAGCAACAATAGCAATGACATCTTACAACTTTGGGAACCCTAGTCTCTCCACATTGGCTAAATCAGCAGCGGCTTCCGGGTTCGGAACGTCATCATTGGGGATTGCAACTCGAACACTAGGTGAAACAGCCACTACTGCAGCAGCAATAACTACATCATTATGCGCTACCATCGCGACAACAACCACTTCTATTCCGTCCGCCACTACTACATCTAGTGTATCTGTCACATCCTCTCAAACTCTTACTTACAATCAGTTGGAAGAATTGGTCAATAAATGGACTCTTGAGCTTGAGGAACAAGAACGATATTTCTTCGATGAAGCAGATCGTGTTAATCAATGGGATCAAACCTTGATTTGTAACGCAGAAAATATAACAGCTATGTACAAAAAGGTAGAAATGTGTCAATGTGAACAGAGTCGTCTTGAGCAGGAATTAGATTT ] [+] EMBL CD156335 [ AATGACATCTTACAACTTTGGGAACCCTAGTCTCTCCACATTGGCTAAATCAGCAGCGGCTTCCGGGTTCGGAACGTCATCATTGGGGATTGCAACTCGAACACTAGGTGAAACAGCCACTACTGCAGCAGCAATAACTACATCATTATGCGCCACCATCGCGACAACAACCACTTCTATTCCGTCCGCCACTACTACATCTAGTGTATCTGTCACATCCTCTCAAACTCTTACTTACAATCAGTTGGAAGAATTGGTCAATAAATGGACTCTTGGGCTTGAGGAACAAGAACGATATTTCTTCGATGAAGCAGATCGTATTAATCAATGGGATCAAACCTTGATTTGTAACGCAGAAAATATAACAGCTATGTACAAAAAGGTAGAAATGTGTCAATGTGAACAGAGTCGTCTTGAGCAGGAATTAGATTTTATTGAAGGTCAACAACGTGAATTGGAAAGTTTACTGGAACCACTAGAACGTGCAGTGAATGAATTACCACCCGGTCAGTTACATTCAGATTATGAACGTGAAGCTATATTTCAATTGGCTACAAATGTCGACTTAGAATTAGGTCAACTATTG ] [-] EMBL CD075881 [ ACAACGTGAATTGGAAAGTTTACTGGAACCACTAGAACGTGCAGTGAATGAATTACCACCCGGTCAGTTACATTCAGATTATGAACGTGAAGCTATATTTCAATTGGCTACAAATGTCGACTTAGAATTAGGTCAACTATTGACTGATTTACGTGAAATAGCCGATCAAACAAACACCACTACAATGAATGTTACTACTGGTTTTAATTCATCGGATAATAGTACAACTACTACGAATGCCCCTAAGGAGAATACTATGATTAATGGTAATAATAAACTAACTTCATCAAATAACGGGGATATTATGAATCAAATTACGCGTATTTTGAATTGTCATATGCATTCACTCAATTGGATTCCCCATAACACACAAGAAATAATGGATCGTTTAAAGGTGTTGAATGGTGTTTCATAACAAAGTGATTCCAGTGTAGATTGTCCATTGTCAATAATGAATGAATATATATATATATATATATATATATATATATATATATATATATGATTACGATTCTTATTGTTATTTTAACAATAAAGACTA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||