These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10268#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1704 fasta sequence [GTGAATCAGAAGATCCTGCTGTTCCTGAATCTGACTCGAAACGATGACGATTGCAAGCATTTTGTAAATAATGCTCGAATCCTGACATGTCAGTTTCTGAGTTGTTTGAATCCTGAGTTGCAATTGAATTCATTTCATAGCTCTCATTTGAAGAACTGTAGTTACCGTTGGTAATATTGGAGTTCGGAACTCTGCTCGCTGTGCAAGAACCTAATGTAGAAGAAACTGAATTGGAAGGTGAAGCCAACTGATTAGACAATGTGGATAAACTCTGATTCAATTGCGACGAGTTAACAGCAGAAGATGATGTTACTACAGACTGAGAACTCCCTACTGAACTGTCCACTCCAAGCTGGCGACTTTTACGTTTTTCTTCTAGCTCACGGTGTATCTTGTAACACTTCTGAGCCAACAAATGAAAATAATGATCAATATCTGTAGCCGTAACATACATTTCGCGTTCAACTTTGCGCGCATATTCGATTAGATTTCGCATTCTTGGGTCTGAATAGGCAGCAGGATCGGGAAATGGGAAGATGAAACGTACAATTCTGCGGACAACATGATTGCGTTGAGATATATCCACACCTTTTCGCCAGTCATTTTGCTCGGCAGGAGTACAGTTCACTGCTACATGACTACTGACACCATTTAGGTTCGAAGCGTCTGAGATCTGAGTACTAGGGATGACTGAGCTAGGTGCTCGTGTAACAGCCGTGTTAACAGGAACACTAGCGATGGAAGTGACTCGAAAAGGTTGGCCAGGCGGCTGCTGAGCAGCACAGGAATGAGGACTGGAGTCAACACCATTTACTTCGGGAACGCGATTCGCGACTGGATGTACCTGAG-TTGAGTTTTGAGGTGGACGTATCATTTGATTAC--G-TGGTAGTGTTGGTTTTGTTTCAAAGGCTCGCACACAGGGCACTCCCGATTGTTACAGTTTTTCCAGTGTGATATAATTTGACGAGAGGAAGCACAATGCGGCGTTTGGCAATTTTTGCCCTGTGTACATGAAGTCATGTGTTGTAAGACTCCACGCATTGTGTTGCAATGAGGTGTTGTACATTGGCTTATTCGTCCATTGCTCTCATCTTCTTGGCGCTGACAACGGCGAGCATGGAGTAATAGGATCAACTGCTGCTGGATGAGTTGACGTTTTTCCGGATCTGTTGCAACTACCGAAGGGGCACTAGTTGTGGCCGTATATGTCTGACCTATCGAGTGAGTGCTTGAAACAGGAGCCGCGTTGCGAATATTGGCAGGACTACTCATTAGTGATGGATTTTGACTTGGTATGTTAGTTACGACTATTGATGGACCGAGAACACGCGGAGAGTGATTCTGTGCATGAATCTGTGTATTATATACATTTCTGGATAGCAATGTCTCGAGCATATCAGGCTGGCTGGCAGGAGTGCTGCAATGAGCATGAGTCATTGATCCAGGGTTATATCCAACATTTGAATTGNGGGATGCACGGTGCACAATTGAATGGGAATATGATGAATGAGCACCACACACAGGAACACATAAAGTCATGGCCTCCGGTCCAATGTATTGAATGGGTTGGTTATTTGCTGACAAAGAGCAGATGGATGTTGCTGTAGGCAGTTTAGCCGATGATCTGGATATTTGAATCGTATGAATTTCCCCAGAAGATGAGTAATTATTAATAATTGGTAATCCTGTGCAACAAGACGGAAG] [-] EMBL CD116230 [GTGAATCAGAAGATCCTGCTGTTCCTGAATCTGACTCGAAACGATGACGATTGCAAGCATTTTGTAAATAATGCTCGAATCCTGACATGTCAGTTTCTGAGTTGTTTGAATCCTGAGTTGCAATTGAATTCATTTCATAGCTCTCATTTGAAGAACTGTAGTTACCGTTGGTAATATTGGAGTTCGGAACTCTGCTCGCTGTGCAAGAACCTAATGTAGAAGAAACTGAATTGGAAGGTGAAGCCAACTGATTAGACAATGTGGATAAACTCTGATTCAATTGCGACGAGTTGACAGCAGAAGATGATGTTACTACAGACTGAGAACTCCCTACTGAACTGTCCACTCCAAGCTGGCGACTTTTACGTTTTTCTTCTAGCTCACGGTGTATCTTGTAACACTTCTGAGCCAACAAATGAAAATAATGATCAATATCTGTAGCCGTAACATACATTTCGCGTTCAACTTTGCGCGCATATTCGATTAGATTTCGCATTCTTGGGTCTGAATAGGCAGCAGGATCGGGAAATGGGAAGATGAAACGTACAATTCTGCGGACAACATGATTG ] [-] EMBL CD124501 [ CTTGAAACGATGACGATTGCAAGCATTTTGTAAATAATGCTCGAATCTTGACATGTCAGTTTCTGAGTTGTTTGAATCCTGAGTTGCAAATGAATTCATTTCATAGCTCTCATTTGAAGAATTGTAGTTACCGTTGGTAATATTGGAGTTCGGAACTCTGCTCGCTGTGCAAGAACCTAATGTAGAAGAAACTGAATTGGAAGGTGAAGCCAACTGATTAGACAATGTGGATAAACTCTGATTCAATTGCGACGAGTTAACAGCAGAAGATGATGTTACTACAGACTGAGAACTCCCTACTGAACTGTCCACTCCAAGCTGGCGACTTTTACGTTTTTCTTCTAGCTCACGGTGTATCTTGTAACACTTCTGAGCCAACAAATGAAAATAATGATCAATATCTGTAGCCGTAACATACATTTCGCGTTCAACTTTGCGCGCAT ] [+] EMBL CD127137 [ TGATTAGACAATGTGGATAAACTCTGATTCAATTGCGACGAGTTAACAGCAGAAGATGATGTTACTACAGACTGAGAACTCCCTACTGAACTGTCCACTCCAAGCTGGCGACTTTTACGTTTTTCTTCTAGCTCACGGTGTATCTTGTAACACTTCTGAGCCAACAAATGAAAATAATGATCAATATCTGTAGCCGTAACATACATTTCGCGTTCAACTTTGCGCGCATATTCGATTAGATTTCGCATTCTTGGGTCTGAATAGGCAGCAGGATCGGGAAATGGGAAGATGAAACGTACAATTCTGCGGACAACATGATTGCGTTGAGATATATCCACACCTTTTCGCCAGTCATTTTGCTCGGCAGGAGTACAGTTCACTGCTACATGACTACTGACACCATTTANGTTCGAAGCGTCTGAGATCTGAGTACTANGGATGACTGAGCTAGGTGCTCGTGTAACAGCCGTGTTAACAGGAACACTAGCGATGGAAGTGACTCGAANAGGTTGGCCAGGCNGCTGCCGAGCAGCACAGGAATGAGGACTGGAGTCAACACCATTTACTTCGGNAACGCGATTCGCGACTGGATGTACCTGAGTTTGAG TTTGAGGTGGACGTATCATTTGATTAC G TGGTAGTGg ] [-] EMBL CD178807 [ TGATTAGACAATGTGGATAAACTCTGATTCAATTGCGACGAGTTAACAGCAGAAGATGATGTTACTACAGACTGAGAACTCCCTACTGAACTGTCCACTCCAAGCTGGCGACTTTTACGTTTTTCTTCTAGCTCACGGTGTATCTTGTAACACTTCTGAGCCAACAAATGAAAATAATGATCAATATCTGTAGCCGTAACATACATTTCGCGTTCAACTTTGCGCGCATATTCGATTAGATTTCGCATTCTTGGGTCTGAATAGGCAGCAGGATCGGGAAATGGGAAGATGAAACGTACAATTCTGCGGACAACATGATTGCGTTGAGATATATCCACACCTTTTCGCCAGTCATTTTGCTCGGCAGGAGTACAGTTCACTGCTACATGACTACTGACACCATTTAGGTTCGAAGCGTCTGAGATCTGAGTACTAGGGATGACTGAGCTAGGTGCTCGTGTAACAGCCGTGTTAACAGGAACACTAGCGATGGAAGTGACTCGAAAAGGTTGGCCA ] [-] EMBL CD122269 [ TGATTAGACAATGTGGATAAACTCTGATTCAATTGCGACGAGTTAACAGCAGAAGATGATGTTACTACAGACTGAGAACTCCCTACTGAACTGTCCACTCCAAGCTGGCGACTTTTACGTTTTTCTTCTAGCTCACGGTGTATCTTGTAACACTTCTGAGCCAACAAATGAAAATAATGATCAATATCTGTAGCCGTAACATACATTTCGCGTTCAACTTTGCGCGCATATTCGATTAGATTTCGCATTCTTGGGTCTGAATAGGCAGCAGGATCGGGAAATGGGAAGATGAAACGTACAATTCTGCGGACAACATGATTGCGTTGAGATATATCCACACCTTTTCGCCAGTCATTTTGCTCGGCAGGAGTACAGTTCACTGCTACATGACTACTGACACCATTTAGGTTCGAAGCGTTTGAGATTTGAGTACTAGGGATGACTGAGCTAGGTGCTTGTGTAACAGCCGTGTTAACAGGAACACTAGCG ] [-] EMBL CD188246 [ GCAGCAGGATCGGGAAATGGGAAGATGAAACGTACAATTCTGCGGACAACATGATTGCGTTGAGATATATCCACACCTTTTCGCCAGTCATTTTGCTCGGCAGGAGTACAGTTCACTGCTACATGACTACTGACACCATTTAGGTTCGAAGCGTCTGAGATCTGAGTACTAGGGATGACTGAGCTAGGTGCTCGTGTAACAGCCGTGTTAACAGGAACACTAGCGATGGAAGTGACTCGAAAAGGTTGGCCAGGCGGCTGCTGAGCAGCACAGGAATGAGGACTGGAGTCAACACCATTTACTTCGGGAACGCGATTCGCGACTGGATGTACCTGAG TTGAGTTTTGAGGTGGACGTATCATTTGATTAC G ] [+] EMBL CD181968 [ GGAAGATGAAACGTACAATTCTGCGGACAACATGATTGCGTTGAGATATATCCACACCTTTTCGCCAGTCATTTTGCTCGGCAGGAGTACAGTTCACTGCTACATGACTACTGACACCATTTAGGTTCGAAGCGTCTGAGATCTGAGTACTAGGGATGACTGAGCTAGGTGCTCGTGTAACAGCCGTGTTAACAGGAACACTAGCGATGGAAGTGACTCGAAAAGGTTGGCCAGGCGGCTGCTGAGCAGCACAGGAATGAGGACTGGAGTCAACACCATTTACTTCGGGAACGCGATTCGCGACTGGATGTACCTGAG NTGAGTTTTGAGGTGNACGTATCATTTGATTACNNG TGNNAGTG TGNTTTTGTTTCAAAGGCTCGC ] [-] EMBL CD086164 [ AATTCTGCGGACAACATGATTGCGTTGAGATATATCCACACCTTTTCGCCAGTCATTTTGCTCGGCAGGAGTACAGTTCACTGCTACATGACTACTGACACCATTTAGGTTCGAAGCGTCTGAGATCTGAGTACTAGGGATGACTGAGCTAGGTGCTCGTGTAACAGCCGTGTTAACAGGAACACTAGCGATGGAAGTGACTCGAAAAGGTTGGCCAGGCGGCTGCTGAGCAGCACAGGAATGAGGACTGGAGTCAACACCATTTACTTCGGGAACGCGATTCGCGACTGGATGTACCTGAG TTGAGTTTTGAGGTGGACGTATCATTTGATTAC GTTGGTAGTGTTGGTTTTGTTTCAAAGGCTCGCACACAGGGCACTCCCGATTGTTACAGTTTTTCCAGTGTGATATAATTTGACGAGAGGAAGCACAATGCGGCGTTTGGCAATTTTTGCCCTGTGTACATGAAGTCATGTGTTGTAAGACTCCACGCATTGTGTTGCAATGAGGTGTTGTACA ] [+] EMBL CD158467 [ TGAG TTGAGTTTTGAGGTGGACGTATCATTTGATTAC GTTGGTAGTGTTGGTTTTGTTTCAAAGGCTCGCACACAGGGCACTCCCGATTGTTACAGTTTTTCCAGTGTGATATAATTTGACGAGAGGAAGCACAATGCGGCGTTTGGCAATTTTTGCCCTGTGTACATGAAGTCATGTGTTGTAAGACTCCACGCATTGTGTTGCAATGAGGTGTTGTACATTGGCTTATTCGTCCATTGCTCTCATCTTCTTGGCGCTGACAACGGCGAGCATGGAGTAATAGGATCAACTGCTGCTGGATGAGTTGACGTTTTTCCGGATCTGTTGCAACTACCGAAGGGGCACTAGTTGTGGCCGTATATGTCTGACCTATCGAGTGAGTGC ] [+] EMBL CD193657 [ TGAG TTGAGTTTTGAGGTGGACGTATCATTTGATTAC GTTGGTAGTGTTGGTTTTGTTTCAAAGGCTCGCACACAGGGCACTCCCGATTGTTACAGTTTTTCCAGTGTGATATAATTTGACGAGAGGAAGCACAATGCGGCGTTTGGCAATTTTTGCCCTGTGTACATGAAGTCATGTGTTGTAAGACTCCACGCATTGTGTTGCAATGAGGTGTTGTACATTGGCTTATTCGTCCATTGCTCTCATCTTCTTGGCGCTGACAACGGCGAGCATGGAGTAATAGGATCAACTGCTGCTGGATGAGTTGACGTTTTTCCGGATCTGTTGCAACTACCGAAGGGGCACTAGTTGTGGCCGTATATGTCTGACCTATCGAGTGAGTG ] [-] EMBL CD158727 [ GAG TTGAGTTTTGAGGTGGACGTATCATTTGATTAC GTTGGTAGTGTTGGTTTTGTTTCAAAGGCTCGCACACAGGGCACTCCCGATTGTTACAGTTTTTCCAGTGTGATATAATTTGACGAGAGGAAGCACAATGCGGCGTTTGGCAATTTTTGCCCTGTGTACATGAAGTCATGTGTTGTAAGACTCCACGCATTGTGTTGCAATGAGGTGTTGTACATTGGCTTATTCGTCCATTGCTCTCATCTTCTTGGCGCTGACAACGGCGAGCATGGAGTAATAGGATCAACTGCTGCTGGATGAGTTGACGTTTTTCCGGATCTGTTGCAACTACCGAAGGGGCACTAGTTGTGGCCGTATATGTCTGACCTATCGAGTGAGTGCT ] [+] EMBL CD158883 [ tt TGGTAGTGTTGGTTTTGTTTCAAAGGCTCGCACACAGGGCACTCCCGATTGTTACAGTTTTTCCAGTGTGATATAATTTGACGAGAGGAAGCACAATGCGGCGTTTGGCAATTTTTGCCCTGTGTACATGAAGTCATGTGTTGTAAGACTCCACGCATTGTGTTGCAATGAGGTGTTGTACATTGGCTTATTCGTCCATTGCTCTCATCTTCTTGGCGCTGACAACGGCGAGCATGGAGTAATAGGATCAACTGCTGCTGGATGAGTTGACGTTTTTCCGGATCTGTTGCAACTACCGAAGGGGCACTAGTTGTGGCCGTATATGTCTGACCTATCGAGTGAGTGC ] [+] EMBL CD114245 [ cttttgcACAGTTTTTCCAGTGTGATATAATTTGACGAGAGGAAGCACAATGCGGCGTTTGGCAATTTTTGCCCTGTGTACATGAAGTCATGTGTTGTAAGACTCCACGCATTGTGTTGCAATGAGGTGTTGTACATTGGCTTATTCGTCCATTGCTCTCATCTTCTTGGCGCTGACAACGGCGAGCATGGAGTAATAGGATCAACTGCTGCTGGATGAGTTGACGTTTTTCCGGATCTGTTGCAACTACCGAAGGGGCACTAGTTGTGGCCGTATATGTCTGACCTATCGAGTGAGTGCTTGAAACAGGAGCCGCGTTGCGAATATTGGCAGGACTACTCATTAGTGATGGATTTTGACTTGGTATGTTAGTTACGACTATTGATGGACCGAGAACACGCGGAGAGTGATTCTGTGCATGAATCTGTGTATTATATACATTTCTGGATAGCAATGTCTCGAGCATATCAGGCTGGCTGGCAGGAGTGCTGCAATGAGCATGAGTCATTGATCCAGGGTTATATCCAACATTTGAATTGNGGGATGCACGGTGCACAATTGAATGGGAATATGATGAATGAGC ] [-] EMBL CD113365 [ TGACAACGGCGAGCATGGAGTAATAGGATCAACTGCTGCTGGATGAGTTGACGTTTTTCCGGATCTGTTGCAACTACCGAAGGGGCACTAGTTGTGGCCGTATATGTCTGACCTATCGAGTGAGTGCTTGAAACAGGAGCCGCGTTGCGAATATTGGCAGGACTACTCATTAGTGATGGATTTTGACTTGGTATGTTAGTTACGACTATTGATGGACCGAGAACACGCGGAGAGTGATTCTGTGCATGAATCTGTGTATTATATACATTTCTGGATAGCAATGTCTCGAGCATATCAGGCTGGCTGGCAGGAGTGCTGCAATGAGCATGAGTCATTGATCCAGGGTTATATCCAACATTTGAATTGGGGGATGCACGGTGCACAATTGAATGGGAATATGATGAATGAGCACCACACACAGGAACACATAAAGTCATGGCCTCCGGTCCAATGTATTGAATGGGTTGGTTATTTGCTGACAAAGAGCAGATGGATGTTGCTGTAGGCAGTTTAGCCGATGATCTGGATATTTGAATCGTATGAATTTCCCCAGAAGATGAGTAATTATTAATAATTGGTAATCCTGTGCAACAAGACGGAAG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||