cluster # 10276

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Schistosoma mansoni
cluster # 10276 cluster # 10276 Sequences # 15 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10276#0 length = 1634 sequences # 9
consensus_10276#1 length = 1025 sequences # 4

consensus_10276#2 length = 434 sequences # 1
consensus_10276#3 length = 303 sequences # 1

consensusID : consensus_10276#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1634
fasta sequence

                              [GAAAGGTACTTGAAGAGAAAGAAGCACCTCTTGTAGAAGAATCTGATAAATTATTTTGAGGACTAACAGGTTCAACACTCGTCTGATGAGGTAGTCTTGAATGATCTATTAGTCGACGAGGAGCACCTCTACCTTTCACGTGCTGAATAGGTAAACACCTTTCGTGCAGATCACATGAGAAATGTATAGTGTATTGTTGATTTTCTGCAACAGCTGAATTCGTACTCTTTGGCCCCGAAGTCATATACGCACGTAATTTCTCCGCCCATTGTAGATCAGACAAACCACATGGTGTATCGCCTCTCTGTAGGA-GTACAAGCCCAAGTGCAAGACCTGCTGAAAGAGCCATAAGCTCACAGCTGTCACCTGCAAAACCCCCTGAACCACCAGCACCCGTCCAGCCGACGGTATTATTTGTGGGATTATTATTCGACGCATTGGAAACAGTTT-GCTGGGAGTC-TGTAT-CTG-CATTTAATCCTAAG-TG-TGCACTAT-CAGAATGAGAATCTTCACTTAACGAACGACCTAGCTCA-TTAATCAATAAATTAGTAATATGTCGATGTGCTGATGCCTGATAAAGTAACTCCAGACCGAAACATGGCAGCCGCATGACATAAATTAGGAACACTAAGTTGGACATTAATCAAAGGATTGGATGGCAAAAGTGGACGATAATGAACTGCAATAAGTCGCAAAACAGACTGATCCATTGTACCTCGTCTCCCAGCACATAACCCTAAAAGTACAGCCATATTGTGCAAGTCATGCACCCGTACAAGATATTCTCCTATATCATAAGGTGTAATTTTGTTTAAGTGACCATTTAAACCCAAGCCAAGAAGTAGACCAGCTTGTTCTGGACTAGACGTGTCCGGAGATGATGTA-GAATCTTGATTAGTACGAAGATTATTTTTACGATTATTAGTGGATGTGAGTCCGGCAGCACGACAGTTATATAAAATCCATGTTGC----ATCGAGGCATCAGGTGATACACTTAAACCGATAGCCACTCCATTATGAAAATCTGGCCAGTGCTTTGCAGCCAGTACTCCTGGAGACTGTTGAATATTGGAAGTAGACAGTAATGAAGCAGTAGAAGATGCTGAGTTTGTAGCTGTCGTGGATATATTGGAACTGGCGTAATTGTTGAGCAAGTTATTGCTTGGTGTCATACGTCTCAGTCCTAAAGATACAGTACGCAAAGATGCCCCTGCACCACATGATGCTAATGAAGAAGCGATAGCTAGAGCCACAGAATTTCCTGGATGGTTAGAAGCGTCAACACTCTGGACACCAGTGATTCCAAGTCTATCTCCACTACTCCCAGCTATATCTAAGCCACTCGCAATCACCTCAGCAGTTCCAGCTCTGTTGGTACCCGCATTTGCACTAGCAGGCCCGAGGGGCTTTCGAGCGAGGTCAACCAAAACACGCCTTCCACTGCTTGGGGAAATCGCTCGACCACGCAAACATATTGGAGGTACACGAAGTTGTGTCGGTACTTTCGAACCTGTAAGGATTCCAAAAGTCAGCATTCCACGACCAATAACAGAAGCCCAAACACGGATACCAGCTGCAGCTAAGTGCATCTCAAACCTTGCTTCTGTCAAACGAGCATTTAAATCAGATCCAGGGGCA]

[+] EMBL CD116360             [GAAAGGTACTTGAAGAGAAAGAAGCACCTCTTGTAGAAGAATCTGATAAATTATTTTGAGGACTAACAGGTTCAACACTCGTCTGATGAGGTAGTCTTGAATGATCTATTAGTCGACGAGGAGCACCTCTACCTTTCACGTGCTGAATAGGTAAACACCTTTCGTGCAGATCACATGAGAAATGTATAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD060255             [                                                                                                                              CTCTACCTTTCACGTGCTGAATAGGTAAACACCTTTCGTGCAGATCACATGAGAAATGTATAGTGTATTGTTGATTTTCTGCAACAGCTGAATTCGTACTCTTTGGCCCCGAAGTCATATACGCACGTAATTTCTCCGCCCATTGTAGATCAGACAAACCACATGGTGTATCGCCTCTCTGTAGGA GTACAAGCCCAAGTGCAAGACCTGCTGAAAGAGCCATAAGCTCACAGCTGTCACCTGCAAAACCCCCTGAACCACCAGCACCCGTCCAGCCGACGGTATTATTTGTGGGATTATTATTCGACGCATTGGAAACAGTTT GCTGGGAGTC TGTAT CTG CATTTAATCCTAAG TG TGCACTAT CAGAATGAGAATCTTCACTTAACGAACGACCTAGCTCA TTAATCAATAAATTAGTAATATGTCGATGTGCTGATGCCTGATAAAGTAACTCCAGACCGAAACATGGCAGCCGCATGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD060244             [                                                                                                                                                                                                                                                                                                               TCTGTAGGAGGTACAAGCCCAAGTGCAAGACCTGCTGAAAGAGCCATAAGCTCACAGCTGTCACCTGCAATACCCCCTGAACCACCAGCACCCGTCCAGCCGACGGTATTATTTGTGGGATTATTATTCGACGCATTGGAAACAGTTT GCTGGGAGTC TGTAT CTG CATTTAATCCTAAG TG TGCACTAT CAGAATGAGAATCTTCACTTAACGAACGACCTAGCTCA TTAATCAATAAATTAGTAATATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD155878             [                                                                                                                                                                                                                                                                                                                           ACAAGCCCAAGTGCAAGACCTGCTGAAAGAGCCATAAGCTCACAGCTGTCACCTGCAAAACCCCCTGAACCACCAGCACCCGTCCAGCCGACGGTATTATTTGTGGGATTATTATTCGACGCATTGGAAACAGTTT GCTGGGAGTC TGTAT CTG CATTTAATCCTAAG TG TGCACTAT CAGAATGAGAATCTTCACTTAACGAACGACCTAGCTCA TTAATCAATAAATTAGTAATATGTCGATGTGCTGATCCCTGATAAAGTAACCCAAGACCGAAA ATGGCAGCCGCTTGACATAAATTAGGAACACTAAGTTGGACATTAATCAAAGGATTGGATGGCAAAAGTGGACGATAATGAACTGCAATAAGTCGCAAAACAGACTGATCCATTGTACCTCGTCTCCCAGCACATAACCCTAAAAGTACAGCTATATTGTGCAAGTCATGCACCCGTACAAGATATTCTCCTATATCATAAGGTGTAATTNTGTTTAAGTGACCATTTAAACCCAAGCCAAGAAGTAGACCAGCTTGTTCTGGACTAGACGTGTNCGGAGATGATGTANAAATCTTGATTAGTACGAAGAATATTTTTACGATTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD061683             [                                                                                                                                                                                                                                                                                                                                     GTGCAAGACCTGCTGAAAGAGCCATAAGCTCACAGCTGTCACCTGCAAAACCCCCTGAACCACCAGCACCCGTCCAGCCGACGGTATTATTTGTGGGATTATTATTCGACGCATTGGAAACACTTTAGCTGGGAGTCATGTATCCTGACATTTAATCCTAAGATGCTGCACTATACAGAATGAGAATCTTCACTTCACGAACGACCTAGCTCACTTAATCAATAAATTAGTAATATCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD162749             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTAAAAGTACAGCCATATTGTGCAAGTCATGCACCCGTACAAGATATTCTCCTATATCATAAGGTGTAATTTTGTTTAAGTGACCATTTAAACCCAAGCCAAGAAGTAGACCAGCTTGTTCTGGACTAGACGTGTCCGGAGATGATGTA GAATCTTGATTAGTACGAAGATTATTTTTACGATTATTAGTGGATGTGAGTCCGGCAGCACGACAGTTATATAAAATCCATGTTGC    ATCGAGGCATCAGGTGATACACTTAAACCGATAGCCACTCCATTATGAAAATCTGGCCAGTGCTTTGCAGCCAGTACTCCTGGAGACTGTTGAATATTGGAAGTAGACAGTAATGAAGCAGTAGAAGATGCTGAGTTTGTAGCTGTCGTGGATGTATTGGAACTGGCGTAATTGTTGAGCAAGTTATTGCTTGGTGTCATACGTCTCAGTCCTAAAGACACAGTACGCAAAGATGCCCCTGCACCACATGATGCTAATGAAGAAGCGATAGCTAGAGCC                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD180839             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAAAAGTACAGCCATATTGTGCAAGTCATGCACCCGTACAAGATATTCTCCTATATCATAAGGTGTAATTTTGTNTAAGTGACCATTTAAACCCAAGCCAAGAAGTAGACCAGCTTGTTCTGGACTAGACGTGTCCGGAGATGATGTA GAATCTTGATTAGTACGAAGATTATTTTTACGATTATTAGTGGATGTGAGTCCGGCAGCACGACAGTTATATAAAATCCATGTTGCATCTATCGAGGCATCAGGTGATACACTTAAACCGATAGCCACTCCATTATGAAAATCTGGCCAGTGCTTTGCAGCCAGTACTCCTGGAGACTGTTGAGTATTGGAAGTAGACAGTAATGAAGCAGTAGAAGATGCTGAGTTTGTAGCTGTCGTGGATATATTGGAACTGGCGTAATTGTTGAGCAAGTTATTGCTTGGTGTCATACGTCTCAGTCCTAAAGATACAGTACGCAAAGATGCCCCTGCACCACATGATGCTAATGAAGAAGCGATAGCTAGAGCCA                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD154790             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTACTCCTGGAGACTGTTGAATATTGGAAGTAGACAGTAATGAAGCAGTAGAAGATGCTGAGTTTGTAGCTGTCGTGGATATATTGGGACTGGCGTAATTGTTGAGCAAGTTATTGCTTGGTGTCATACGTCTCAGTCCTAAAGATACAGTACGCAAAGATGCCCCTGCACCACATGATGCTAATGAAGAAGCGATAGCTAGAGCCACAGAATTTCCTGGATGGTTAGAAGCGTCAACACTCTGGACACCAGTGATTCCAAGTCTATCTCCACTACTCCCAGCTATATCTAAGCCACTCGCAATCACCTCAGCAGTTCCAGCTCTGTTGGTACCCGCATTTGCACTAGCAGGCCCGAGGGGCTTTCGAGCGAGGTCAACCAAAACACGCCTTCCAC                                                                                                                                                                                                     ]
[+] EMBL CD114795             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCGCAATCACCTCAGCAGTTCCAGCTCTGTTGGTACCCGCATTTGCACTAGCAGGCCCGAGGGGCTCTCGAGCGAGGTCAACCAAAACACGCCTTCCACTGCTTGGGGAAATCGCTCGACCACGCAAACATATTGGAGGTACACGAAGTTGTGTCGGTACTTTCGAACCTGTAAGGATTCCAAAAGTCAGCATTCCACGACCAATAACAGAAGCCCAAACACGGATACCAGCTGCAGCTAAGTGCATCTCAAACCTTGCTTCTGTCAAACGAGCATTTAAATCAGATCCAGGGGCA]




>consensus_10276#0
GAAAGGTACTTGAAGAGAAAGAAGCACCTCTTGTAGAAGAATCTGATAAATTATTTTGAG
GACTAACAGGTTCAACACTCGTCTGATGAGGTAGTCTTGAATGATCTATTAGTCGACGAG
GAGCACCTCTACCTTTCACGTGCTGAATAGGTAAACACCTTTCGTGCAGATCACATGAGA
AATGTATAGTGTATTGTTGATTTTCTGCAACAGCTGAATTCGTACTCTTTGGCCCCGAAG
TCATATACGCACGTAATTTCTCCGCCCATTGTAGATCAGACAAACCACATGGTGTATCGC
CTCTCTGTAGGAGTACAAGCCCAAGTGCAAGACCTGCTGAAAGAGCCATAAGCTCACAGC
TGTCACCTGCAAAACCCCCTGAACCACCAGCACCCGTCCAGCCGACGGTATTATTTGTGG
GATTATTATTCGACGCATTGGAAACAGTTTGCTGGGAGTCTGTATCTGCATTTAATCCTA
AGTGTGCACTATCAGAATGAGAATCTTCACTTAACGAACGACCTAGCTCATTAATCAATA
AATTAGTAATATGTCGATGTGCTGATGCCTGATAAAGTAACTCCAGACCGAAACATGGCA
GCCGCATGACATAAATTAGGAACACTAAGTTGGACATTAATCAAAGGATTGGATGGCAAA
AGTGGACGATAATGAACTGCAATAAGTCGCAAAACAGACTGATCCATTGTACCTCGTCTC
CCAGCACATAACCCTAAAAGTACAGCCATATTGTGCAAGTCATGCACCCGTACAAGATAT
TCTCCTATATCATAAGGTGTAATTTTGTTTAAGTGACCATTTAAACCCAAGCCAAGAAGT
AGACCAGCTTGTTCTGGACTAGACGTGTCCGGAGATGATGTAGAATCTTGATTAGTACGA
AGATTATTTTTACGATTATTAGTGGATGTGAGTCCGGCAGCACGACAGTTATATAAAATC
CATGTTGCATCGAGGCATCAGGTGATACACTTAAACCGATAGCCACTCCATTATGAAAAT
CTGGCCAGTGCTTTGCAGCCAGTACTCCTGGAGACTGTTGAATATTGGAAGTAGACAGTA
ATGAAGCAGTAGAAGATGCTGAGTTTGTAGCTGTCGTGGATATATTGGAACTGGCGTAAT
TGTTGAGCAAGTTATTGCTTGGTGTCATACGTCTCAGTCCTAAAGATACAGTACGCAAAG
ATGCCCCTGCACCACATGATGCTAATGAAGAAGCGATAGCTAGAGCCACAGAATTTCCTG
GATGGTTAGAAGCGTCAACACTCTGGACACCAGTGATTCCAAGTCTATCTCCACTACTCC
CAGCTATATCTAAGCCACTCGCAATCACCTCAGCAGTTCCAGCTCTGTTGGTACCCGCAT
TTGCACTAGCAGGCCCGAGGGGCTTTCGAGCGAGGTCAACCAAAACACGCCTTCCACTGC
TTGGGGAAATCGCTCGACCACGCAAACATATTGGAGGTACACGAAGTTGTGTCGGTACTT
TCGAACCTGTAAGGATTCCAAAAGTCAGCATTCCACGACCAATAACAGAAGCCCAAACAC
GGATACCAGCTGCAGCTAAGTGCATCTCAAACCTTGCTTCTGTCAAACGAGCATTTAAAT
CAGATCCAGGGGCA

consensusID : consensus_10276#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1025
fasta sequence

                              [AGGCTTAGTCGGAAAACTATTCCAATTTCCGCTTGTCTTTCATAACTATATACTTAACTTCTCTTACTATCTCATTTACTATGCCCCTTTCATCCAAAACGTTATTTTCCGCTGCAACAATTTGCTCCTTATTGGTGTCCCTGTCACAGGCTTCTTGACTGTTCAACGTTTTCTTATAGCTTAACAACAATTTATGGTCGCAACAGCCTGTTGACGAATAACAACAATTGCCTAAGAGCACTTTTAACCAAATATTTTATTTCCAGGTTGTCCATCGACTAAAAAATGACCACAGCCGGGAGACCAACATGGGATACTGCTAAAGGTAGTAGGGGAAAGTGGGAAGGTGATTT-AAGTGCTTTGTCCAAGCAGTACTCTGTTCGTGACTTGCCGGCACATACAAAATTAAAATTGCGTCAAGAAGGACAAGGAAGACCTGAAGATATTCAAGGAAAAGATTTTAAACGTGCTTTGGAAGAAAAAGAGAAACGATTAGCTCAAGAAAAGTCGGGAAGGCCTTCCATAAATGCCACTAGCCAACAACCAGCAATTACCAGTGCCAAACGACCAAGTTCTGCTGCTGTCGCACCAACTATTGATAGTAGTACTATAGGAAGTATAAAACGTACACGACCTGAAACAACCACTACTGTGTCAACAACTAATTTAGACGCTGATGATCCATGGGACGAGGACTATGATGAAGATCAAGACGATGTAATTATCACTAAGAAATCGAATCATAATAAAAGTAAGAATTCAACTGAAGATAGGTTTGATGATGATCAAAATGATGGTGATGACGATGAAGATGCTGACAATGATGATGTCGACGACGATGATGAAGACGATGAAGAAATGCTCCTAGCTGAATAGGCTACGATTACACGTGAACGAGCTGAAGAAGCAGCCCGTTTGGCTGCTGCACGGACCGCAGGTGAAGAAACAATTCGTATGGACAATATCTTGCAAGGAGATCCTCTTATAAATTCATCTATTTCCTCAGACTTTAAAGTCAAACGAAG]

[+] EMBL CD083584             [AGGCTTAGTCGGAAAACTATTCCAATTTCCGCTTGTCTTTCATAACTATATACTTAACTTCTCTTACTATCTCATTTACTATGCCCCTTTCATCCAAAACGTTATTTTCCGCTGCAACAATTTGCTCCTTATTGGTGTCCCTGTCACAGGCTTCTTGACTGTTCAACGTTTTCTTATAGCTTAACAACAATTTATGGTCGCAACAGCCTGTTGACGAATAACAACAATTGCCTAAGAGCACTTTTAACCAAATATTTTATTTCCAGGTTGTCCATCGACTAAAAAATGACCACAGCCGGGAGACCAACATGGGATACTGCTAAAGGTAGTAGGGGAAAGTGGGAAGGTGATTT AAGTGCTTTGTCCAAGCAGTACTCTGTTCGTGACTTGCCGGCACATACAAAATTAAAATTGCGTCAAGAAGGACAAGGAAGACCTGAAGATATTCAAGGAAAAGATTTTACACGTGCTTTGGAAGAAAAAGAGAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD068989             [                                                                                                                                                                                                                                                                                                                                                     GGAAGGT ATTTAAAGTGCTTTGTCCAAGCAGTACTCTGTTCGTGACTGACCGGCACATACAAAATTAAAATTGCGTCAAGAAGGACAAGGAAGACTTGAAGATATTCAAGGAAAAGATTTTAAACGTGCTTTGGAAGAAAAAGAGAAACGATTAGCTCAAGAAAAGTCGGGAAGGCCTTCCATAAATGCCACTAGCCAACAACCAGCAATTACCAGTGCCAAACGACCAAGTTCTGCTGCTGTCGCACCAACTATTGATAGTAGTACTATAGGAAGTATAAAACGTACACGACCTGAAACAACCACTACTGTGTCAACAAC                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD188409             [                                                                                                                                                                                                                                                                                                                                                                                                                    AATTAAAATTGCGTCAAGAAGGACAAGGAAGACCTGAAGATATTCAAGGAAAAGATTTTAAACGTGCTTTGGAAGAAAAAGAGAAACGATTAGCTCAAGAAAAGTCGGGAAGGCCTTCCATAAATGCCACTAGCCAACAACCAGCAATTACCAGTGCCAAACGACCAAGTTCTGCTGCTGTCGCACCAACTATTGATAGTAGTACTATAGGAACTATAAAACGTACACGACCTGAAACAACCACTACTGTGTCAACAACTAATTTAGACGCTGATGATCCATGGGACGAGGACT                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD118985             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGCTGTCGCACCAACTATTGATAGTAGTACTATAGGAAGTATAAAACGTACACGACCTGAAACAACCACTACTGTGTCAACAACTAATTTAGACGCTGATGATCCATGGGACGAGGACTATGATGAAGATCAAGACGATGTAATTATCACTAAGAAATCGAATCATAATAAAAGTAAGAATTCAACTGAAGATAGGTTTGATGATGATCAAAATGATGGTGATGACGATGAAGATGCTGACAATGATGATGTCGACGACGATGATGAAGACGATGAAGAAATGCTCCTAGCTGAATAGGCTACGATTACACGTGAACGAGCTGAAGAAGCAGCCCGTTTGGCTGCTGCACGGACCGCAGGTGAAGAAACAATTCGTATGGACAATATCTTGCAAGGAGATCCTCTTATAAATTCATCTATTTCCTCAGACTTTAAAGTCAAACGAAG]




>consensus_10276#1
AGGCTTAGTCGGAAAACTATTCCAATTTCCGCTTGTCTTTCATAACTATATACTTAACTT
CTCTTACTATCTCATTTACTATGCCCCTTTCATCCAAAACGTTATTTTCCGCTGCAACAA
TTTGCTCCTTATTGGTGTCCCTGTCACAGGCTTCTTGACTGTTCAACGTTTTCTTATAGC
TTAACAACAATTTATGGTCGCAACAGCCTGTTGACGAATAACAACAATTGCCTAAGAGCA
CTTTTAACCAAATATTTTATTTCCAGGTTGTCCATCGACTAAAAAATGACCACAGCCGGG
AGACCAACATGGGATACTGCTAAAGGTAGTAGGGGAAAGTGGGAAGGTGATTTAAGTGCT
TTGTCCAAGCAGTACTCTGTTCGTGACTTGCCGGCACATACAAAATTAAAATTGCGTCAA
GAAGGACAAGGAAGACCTGAAGATATTCAAGGAAAAGATTTTAAACGTGCTTTGGAAGAA
AAAGAGAAACGATTAGCTCAAGAAAAGTCGGGAAGGCCTTCCATAAATGCCACTAGCCAA
CAACCAGCAATTACCAGTGCCAAACGACCAAGTTCTGCTGCTGTCGCACCAACTATTGAT
AGTAGTACTATAGGAAGTATAAAACGTACACGACCTGAAACAACCACTACTGTGTCAACA
ACTAATTTAGACGCTGATGATCCATGGGACGAGGACTATGATGAAGATCAAGACGATGTA
ATTATCACTAAGAAATCGAATCATAATAAAAGTAAGAATTCAACTGAAGATAGGTTTGAT
GATGATCAAAATGATGGTGATGACGATGAAGATGCTGACAATGATGATGTCGACGACGAT
GATGAAGACGATGAAGAAATGCTCCTAGCTGAATAGGCTACGATTACACGTGAACGAGCT
GAAGAAGCAGCCCGTTTGGCTGCTGCACGGACCGCAGGTGAAGAAACAATTCGTATGGAC
AATATCTTGCAAGGAGATCCTCTTATAAATTCATCTATTTCCTCAGACTTTAAAGTCAAA
CGAAG

consensusID : consensus_10276#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 434
fasta sequence

                              [CCTCTTGTAGAAGAATCTGATAAATTATTTTGAGGACTAACAGGTTCAACACACGTCTGATGAGGTAGTCTTGAATGATCTATTAGTCGACGAGGAGCACCTCTACCTTTCACGTGCTGAATAGGTAAACACCTTTCGTGCAGATCACATGAGAAATGTATAGTGTATTGTTGATTTTCTGCAACAGCTGAATTCGTACTCTTTGGCCCCGAAGTCATATACGCACGTAATTTCTCCGCCCATTGTAGATCAGACAAACCACATCTTCAGTTGAATTCTTACTTTTATTATGATTCGATTTCTTAGTGATAATTACATCGTCTTGATCTTCATCATAGTCCTCGTCCCATGGATCATCAGCGTCTAAATTAGTTGTTGACACAGTAGTGGTTGTTTCAGGTCGTGTACGTTTTATACTTCCTATAGTACTACTA]

[-] EMBL CD159515             [CCTCTTGTAGAAGAATCTGATAAATTATTTTGAGGACTAACAGGTTCAACACACGTCTGATGAGGTAGTCTTGAATGATCTATTAGTCGACGAGGAGCACCTCTACCTTTCACGTGCTGAATAGGTAAACACCTTTCGTGCAGATCACATGAGAAATGTATAGTGTATTGTTGATTTTCTGCAACAGCTGAATTCGTACTCTTTGGCCCCGAAGTCATATACGCACGTAATTTCTCCGCCCATTGTAGATCAGACAAACCACATCTTCAGTTGAATTCTTACTTTTATTATGATTCGATTTCTTAGTGATAATTACATCGTCTTGATCTTCATCATAGTCCTCGTCCCATGGATCATCAGCGTCTAAATTAGTTGTTGACACAGTAGTGGTTGTTTCAGGTCGTGTACGTTTTATACTTCCTATAGTACTACTA]




>consensus_10276#2
CCTCTTGTAGAAGAATCTGATAAATTATTTTGAGGACTAACAGGTTCAACACACGTCTGA
TGAGGTAGTCTTGAATGATCTATTAGTCGACGAGGAGCACCTCTACCTTTCACGTGCTGA
ATAGGTAAACACCTTTCGTGCAGATCACATGAGAAATGTATAGTGTATTGTTGATTTTCT
GCAACAGCTGAATTCGTACTCTTTGGCCCCGAAGTCATATACGCACGTAATTTCTCCGCC
CATTGTAGATCAGACAAACCACATCTTCAGTTGAATTCTTACTTTTATTATGATTCGATT
TCTTAGTGATAATTACATCGTCTTGATCTTCATCATAGTCCTCGTCCCATGGATCATCAG
CGTCTAAATTAGTTGTTGACACAGTAGTGGTTGTTTCAGGTCGTGTACGTTTTATACTTC
CTATAGTACTACTA

consensusID : consensus_10276#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 303
fasta sequence

                              [ATCTATCGAGGCATCAGGTGATACACTTAAACCGATAGCCACTCCATTATGAAAATCTGGCCAGTGCTTTGCAGCCAGTACTCCTGGAGACTGTTGAATATTGGAAGTAGACAGTAATGAAGCAGTAGAAGATGCTGAGTTTGTAGCTGTCGTGGATATATTGGAACTGGCGTAATTGTTGAGCAAGTTATTGCTTGGTGTCATACGTCTCAGTCACGCAAAGATGCCCCTGCACCACATGATGCTAATGAAGAAGCGATAGCTAGAGCCACAGAATTTCCTGGATGGTTAGAAGCGTCAACA]

[+] EMBL CD187539             [ATCTATCGAGGCATCAGGTGATACACTTAAACCGATAGCCACTCCATTATGAAAATCTGGCCAGTGCTTTGCAGCCAGTACTCCTGGAGACTGTTGAATATTGGAAGTAGACAGTAATGAAGCAGTAGAAGATGCTGAGTTTGTAGCTGTCGTGGATATATTGGAACTGGCGTAATTGTTGAGCAAGTTATTGCTTGGTGTCATACGTCTCAGTCACGCAAAGATGCCCCTGCACCACATGATGCTAATGAAGAAGCGATAGCTAGAGCCACAGAATTTCCTGGATGGTTAGAAGCGTCAACA]




>consensus_10276#3
ATCTATCGAGGCATCAGGTGATACACTTAAACCGATAGCCACTCCATTATGAAAATCTGG
CCAGTGCTTTGCAGCCAGTACTCCTGGAGACTGTTGAATATTGGAAGTAGACAGTAATGA
AGCAGTAGAAGATGCTGAGTTTGTAGCTGTCGTGGATATATTGGAACTGGCGTAATTGTT
GAGCAAGTTATTGCTTGGTGTCATACGTCTCAGTCACGCAAAGATGCCCCTGCACCACAT
GATGCTAATGAAGAAGCGATAGCTAGAGCCACAGAATTTCCTGGATGGTTAGAAGCGTCA
ACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10276#0      GAAAGGTACTTGAAGAGAAAGAAGCACCTCTTGTAGAAGAATCTGATAAATTATTTTGAG 60
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      ------------------------------------------------------------
                                                                                   

consensus_10276#0      GACTAACAGGTTCAACACTCGTCTGATGAGGTAGTCTTGAATGATCTATTAGTCGACGAG 120
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      ------------------------------------------------------------
                                                                                   

consensus_10276#0      GAGCACCTCTACCTTTCACGTGCTGAATAGGTAAACACCTTTCGTGCAGATCACATGAGA 180
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      ------------------------------------------------------------
                                                                                   

consensus_10276#0      AATGTATAGTGTATTGTTGATTTTCTGCAACAGCTGAATTCGTACTCTTTGGCCCCGAAG 240
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      ------------------------------------------------------------
                                                                                   

consensus_10276#0      TCATATACGCACGTAATTTCTCCGCCCATTGTAGATCAGACAAACCACATGGTGTATCGC 300
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      ------------------------------------------------------------
                                                                                   

consensus_10276#0      CTCTCTGTAGGAGTACAAGCCCAAGTGCAAGACCTGCTGAAAGAGCCATAAGCTCACAGC 360
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      ------------------------------------------------------------
                                                                                   

consensus_10276#0      TGTCACCTGCAAAACCCCCTGAACCACCAGCACCCGTCCAGCCGACGGTATTATTTGTGG 420
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      ------------------------------------------------------------
                                                                                   

consensus_10276#0      GATTATTATTCGACGCATTGGAAACAGTTTGCTGGGAGTCTGTATCTGCATTTAATCCTA 480
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      ------------------------------------------------------------
                                                                                   

consensus_10276#0      AGTGTGCACTATCAGAATGAGAATCTTCACTTAACGAACGACCTAGCTCATTAATCAATA 540
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      ------------------------------------------------------------
                                                                                   

consensus_10276#0      AATTAGTAATATGTCGATGTGCTGATGCCTGATAAAGTAACTCCAGACCGAAACATGGCA 600
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      ------------------------------------------------------------
                                                                                   

consensus_10276#0      GCCGCATGACATAAATTAGGAACACTAAGTTGGACATTAATCAAAGGATTGGATGGCAAA 660
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      --------AGGCTTAGTCGGAAAACTATTCCAATTTCCGCTTGTCTTTCATAACTATATA 52
                                                                                   

consensus_10276#0      AGTGGACGATAATGAACTGCAATAAGTCGCAAAACAGACTGATCCATTGTACCTCGTCTC 720
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      CTTAACTTCTCTT--ACTATCTCATTTACTATGCCCCTTTCATCCAAAACGTTATTTTCC 110
                                                                                   

consensus_10276#0      CCAGCACATAACCCTAAAAGTACAGCCATATTGTGCAAGTCATGCACCCGTACAAGATAT 780
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      GCTGCA-ACAATTTGCTCCTTATTGGTGTCCCTGTCACAGGCTTCTTGACTGTTCAACGT 169
                                                                                   

consensus_10276#0      TCTCCTATATCATAAGGTGTAATTTTGTTTAAGTGACCATTTAAACCCAAGCCAAGAAGT 840
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      TTTCTTATAGCTTAACAACAATTTATGGTCGCAACAGCCTGTTGACGAATAACAACAATT 229
                                                                                   

consensus_10276#0      AGACCAGCTTGTTCTGGACTAGACGTGTCCGGAGATGATGTAGAATCTTGATTAGTACGA 900
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      GCCTAAGAGCACTTTTAACCAAATATTTT--ATTTCCAGGTTGTCCATCGACTAA-AAAA 286
                                                                                   

consensus_10276#0      AGATTATTTTTACGATTATTAGTGGATGTGAGTCCGGCAGCACGACAGTTATATAAAATC 960
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      --------------------------------------------------CCTCTTGTAG 10
consensus_10276#1      TGACCACAGCCGGGAGACCAACATGGGATACTGCTAAAGGTAGTAGGGGAAAGTGGGAAG 346
                                                                                   

consensus_10276#0      CATGTTGCATCGAGGCATCAGGTGATACACTTAAACCGATAGCCACTCCATTATGAAAAT 1020
consensus_10276#3      ----ATCTATCGAGGCATCAGGTGATACACTTAAACCGATAGCCACTCCATTATGAAAAT 56
consensus_10276#2      AAGAATCTGATAAATTATTTTGAGGACTAACAGGTTCAACACACGTCTGATGAGGTAGTC 70
consensus_10276#1      GTGATTTAAGTGCTTTGTCC-AAGCAGTACTCTGTTCGTGACTTGCCGGCACATACAAAA 405
                            *           *     *    *       *   *           *   *   

consensus_10276#0      CTGGC-CAGTGCTTTG--CAGCCAGTACTCCTGGAGACTGTTGAATATTGGA--AGTAGA 1075
consensus_10276#3      CTGGC-CAGTGCTTTG--CAGCCAGTACTCCTGGAGACTGTTGAATATTGGA--AGTAGA 111
consensus_10276#2      TTGAA-TGATCTATTAGTCGACGAGGAGCACCTCTACCTTTCACGTGCTGAATAGGTAAA 129
consensus_10276#1      TTAAAATTGCGTCAAGAAGGACAAGGAAGACCTGAAGATATTCAAGGAAAAGATTTTAAA 465
                        *                   * ** *   *       * *               ** *

consensus_10276#0      CA-GTAATGAAGCAGTAGAAGA--TGCTGAGTTTGTAGC-TGTCGTGGA--TATATTGGA 1129
consensus_10276#3      CA-GTAATGAAGCAGTAGAAGA--TGCTGAGTTTGTAGC-TGTCGTGGA--TATATTGGA 165
consensus_10276#2      CA-CCTTTCGTGCAG-ATCACA--TGAGAAATGTATAGTGTATTGTTGA--TTTTCTGCA 183
consensus_10276#1      CGTGCTTTGGAAGAAAAAGAGAAACGATTAGCTCAAGAAAAGTCGGGAAGGCCTTCCATA 525
                       *      *     *  *  * *   *   *            * *   *    *     *

consensus_10276#0      ACTGGCGTAATTGTTGAGCAAGTTATTGCTTGGTGTCATACGTCTCAGTCCTAAAGATAC 1189
consensus_10276#3      ACTGGCGTAATTGTTGAGCAAGTTATTGCTTGGTGTCATACGTCTCAGTC---------- 215
consensus_10276#2      ACAGCTGAATTCGT---ACTCTTTGGC-CCCGAAGTCATATACGCACGTAAT-----TTC 234
consensus_10276#1      AATGCCACTAGCCAACAACCAGCAATT-ACCAGTGCCAAACGACCAAGTTCTGCTGCTGT 584
                       *  *              *               * ** *       **           

consensus_10276#0      AGTACGCAAAGATGCCCCTGCACCACATGATGCTAATGAAGAAGCGATAGCTAGAGCCAC 1249
consensus_10276#3      ---ACGCAAAGATGCCCCTGCACCACATGATGCTAATGAAGAAGCGATAGCTAGAGCCAC 272
consensus_10276#2      TCCGCCCATTGTAGATCAGACAAACCACATCTTCAGTTGAATTCTTACTTTTATTATGAT 294
consensus_10276#1      CGCACCAACTATTGATAGTA-GTACTATAGGAAGTATAAAACGTACACGACCTGAAACAA 643
                           *  *     *            *         *  *      *           * 

consensus_10276#0      AGAATTTCCTGG--ATGGTTA---GAAGCGTC-AACACTCTGGACACCAGTGATTCCAAG 1303
consensus_10276#3      AGAATTTCCTGG--ATGGTTA---GAAGCGTC-AACA----------------------- 303
consensus_10276#2      TCGATTTCTTAGTGATAATTA---CAT-CGTC-TTGATCTTCATCATAGTCCTCGTCCCA 349
consensus_10276#1      CCACTACTGTGTCAACAACTAATTTAGACGCTGATGATCCATGGGACGAGGACTATGATG 703
                           *    *    *    **    *  **      *                       

consensus_10276#0      TCTATCTCCACTACTCCC--AGCTATATCTAAGCCACTCGCAATCACCTCAGCAGTTCCA 1361
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      TGGATCATCAGCGTCTAA--ATTAGTTGTTGACACAGTAGTGGTTGTTTCAGGTCGTGTA 407
consensus_10276#1      AAGATCAAGACGATGTAATTATCACTAAGAAATCGAATCATAATAAAAGTAAGAATTCAA 763
                                                                                   

consensus_10276#0      GCTCTGTTGGTACCCGCATTTGCACTAGCAGGCCCGAGGGGCTTTCGAGCGAGGTCAACC 1421
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      CGTTTTATACTTCCTATAGTACTACTA--------------------------------- 434
consensus_10276#1      CTGAAGATAGGTTTGATGATGATCAAAATGATGGTGATGACGATGAAGATGCTGACAATG 823
                                                                                   

consensus_10276#0      AAAACACGCCTTCCACTGCTTGGGGAAATCGCTCGACCACGCAAACATATTGGAGGTACA 1481
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      ATGATGTCGACGACGATGATGAAGACGATGAAGAAATGCTCCTAGCTGAATAG-GCTACG 882
                                                                                   

consensus_10276#0      CGAAGTTGTGTCGGTACTTTCGAACCTGTAAGGATTCCAAAAGTCAGCATTCCACGACCA 1541
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      ATTACACGTGAACGAGCTGAAGAAGCAGCCCGTTTGGCTGCTGCACGGACCGCAGGTGAA 942
                                                                                   

consensus_10276#0      ATAACAGAAGCCCAAACACGGATACCAGCTGCAGCTAAGTGCATCTCAAACCTTGCTTCT 1601
consensus_10276#3      ------------------------------------------------------------
consensus_10276#2      ------------------------------------------------------------
consensus_10276#1      GAAACAA-----TTCGTATGGACAATATCTTGCAAGGAGATCCTCTTATAAATTCATCTA 997
                                                                                   

consensus_10276#0      GTCAAACGAGCATTTAAATCAGATCCAGGGGCA 1634
consensus_10276#3      ---------------------------------
consensus_10276#2      ---------------------------------
consensus_10276#1      TTTCCTCAGACTTTAAAGTCAAACGAAG----- 1025