cluster # 10277

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Schistosoma mansoni
cluster # 10277 cluster # 10277 Sequences # 15 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10277#0 length = 807 sequences # 2
consensus_10277#1 length = 749 sequences # 7

consensus_10277#2 length = 679 sequences # 5
consensus_10277#3 length = 276 sequences # 1

consensusID : consensus_10277#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 807
fasta sequence

                              [CTCGAGGCCAAAAATTCGGCACGAGGCGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATGTCACAAGCATACTGCGACGTTAAATACATGAAAGATATCCCAGGTACTGCTTTCGTTCCTCCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAAAGCAACCGCTTATTCCTGTACCGTACCCGTATGTTGAAAAATTGACAAAAGCAAATAGTTCGATGTCTTGAAACATTGTTCCCTTCTAATAGACCTGAACTGGTTATTCAATTATTTAAAGAAGCTGGTGTGCAACCAGCCAAGCAGTGTATACAGTTGACAATGTCAGAATTTCGAGATTTATGCTTTGTATATCATCGTATTTGTCAGATTGAACCTGATGTATTCGATTTTGATTAT-CAAACTCGAGTTAATTTACCATTGTGGTATAATCGT-AAGAAAATTCAACGAGAAATGTTAGACAGTCCAACTGGTCTTACAGCCAATCGTGTTCGTCA-AGAAATATATGGATTTAGTCAGTAATGGCTATACGCTATTATTATTATCATATTGTAATCGATTCTTTAATCAACAATTCATTTGTATAACTTGTGAATAAATATACTTCTTCCAATATTTTGAAGTGGTTGAACATTTTACGATGAATCAATCTTGCATACTTGATACGTAAATATATGAATTGTTGTCTCATGTTTATCAACTACTAATGAANGATACTTNTAAGG-ATT-AATTTATC-ACTGTAT-TAT-AACAGTAAAAATTTTTTGCAATGGAAAAAAAAAAAAAAAA]

[+] EMBL CD080093             [CTCGAGGCCAAAAATTCGGCACGAGGCGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATGTCACAAGCATACTGCGACGTTAAATACATGAAAGATATCCCAGGTACTGCTTTCGTTCCTCCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAAAGCAACCGCTTATTCCTGTACCGTACCCGTATGTTGAAAAATTGACAAAAGCAAATAGTTCGATGTCTTGAAACATTGTTCCCTTCTAATAGACCTGAACTGGTTATTCAATTATTTAAAGAAGCTGGTGTGCAACCAGCCAAGCAGTGTATACAGTTGACAATGTCAGAATTTCGAGATTTATGCTTTGTATATCATCGTATTTGTCAGATTGAACCTGATGTATTCGATTTTGATTAT CAAACTCGAGTTAATTTACCATTGTGGTATAATCGT AAGAAAATTCAACGAGAAATGTTAGACAGTCCAACTGGTCTTACAGCCAATCGTGTTCGTCA AGAAATATATGGATTTAGTCAGTAATGGCTATACGCTATTATTATTATCATATTGTAATCGATTCTTTAATCAACAATTCATTTGTATAACTTGTGAATAAATATACTTCTTCCAATATTTTGAAGTGGTTGAACATTTTACGATGAATCAATCTTGCATACTTGATACGTAAATATATGAATTGTTGTCTCATGTTTATCAACTACTAATGAANGATACTTNTAAGG ATT AATTTATC ACTGTAT TAT AACAGTAAAA                              ]
[-] EMBL AI395071             [                                                                                                                                                                                                                                                                                                                                                                                                                       gGATTTTGATTATCCAAACTGGAGTAAATTT CCATTGTGGTATACT GTAAAGAAAA TCAACGAG AATGTTAGACAGTCCAACTGGTCTTACAGCCAATCGTGTTCGTCAGAGAAATATATGGATTTAGTCAGTAATGGCTATACGCTATTATTATTATCATATTGTAATCGATTCTTTAATCAACAATTCATTTGTATAACTTGTGAATAAATATACTTCTTCCAATATTTTGAAGTGGTTGAACATTTTACGATGAATCAATCTTGCATACTTGATACGTAAATATATGAATTGTTGTCTCATGTTTATCAACTACTAATGAAGGATACTTTAAAGGAATTAAATTTATCAACTGTATATATGACCAGTAAAAATTTTTTGCAATGGAAAAAAAAAAAAAAAA]




>consensus_10277#0
CTCGAGGCCAAAAATTCGGCACGAGGCGACTTGCTGCGGATGTATGGGATGAACAGCGTT
CTCGCTTATCTGTTATGTCACAAGCATACTGCGACGTTAAATACATGAAAGATATCCCAG
GTACTGCTTTCGTTCCTCCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAA
AGCAACCGCTTATTCCTGTACCGTACCCGTATGTTGAAAAATTGACAAAAGCAAATAGTT
CGATGTCTTGAAACATTGTTCCCTTCTAATAGACCTGAACTGGTTATTCAATTATTTAAA
GAAGCTGGTGTGCAACCAGCCAAGCAGTGTATACAGTTGACAATGTCAGAATTTCGAGAT
TTATGCTTTGTATATCATCGTATTTGTCAGATTGAACCTGATGTATTCGATTTTGATTAT
CAAACTCGAGTTAATTTACCATTGTGGTATAATCGTAAGAAAATTCAACGAGAAATGTTA
GACAGTCCAACTGGTCTTACAGCCAATCGTGTTCGTCAAGAAATATATGGATTTAGTCAG
TAATGGCTATACGCTATTATTATTATCATATTGTAATCGATTCTTTAATCAACAATTCAT
TTGTATAACTTGTGAATAAATATACTTCTTCCAATATTTTGAAGTGGTTGAACATTTTAC
GATGAATCAATCTTGCATACTTGATACGTAAATATATGAATTGTTGTCTCATGTTTATCA
ACTACTAATGAANGATACTTNTAAGGATTAATTTATCACTGTATTATAACAGTAAAAATT
TTTTGCAATGGAAAAAAAAAAAAAAAA

consensusID : consensus_10277#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 749
fasta sequence

                              [GTTTTGGACTGTTTAGCGGAAAAATATGATGTTTTGTTCATTGATATATCCCTACGTTTGATAATGTGATTGTTTTCGAATTCTGTTTTGTATATATGATTTGCAGGATATTCTAAAATTTAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACTGGTGCAGGAGCTTGGGATGAGTCACCTG-AGGTGGTAAACTCAAATTTAGTAAAATCTACATCAGAAAATCAAAATGAAACTGCACTGGAAAAAATAAGTTCACCACGCTTGTGTGTTATTGGAAACTTACCATTCAACATTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAGCGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAAGTTGCTGAACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATGTCACAAGCATACTGCGACGTTNAATACATGAAAGATATCCCAGGTACTGCTTTCGTTCCTCCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAAAGCAAACGCTTATTCCTGTACCGTACCCGTATGTTGAAAAATTGACAAAAGCAAATAGTTCGATGTCTTGAAACATTGTTCCCTTCTAATAGACCTGAACTGGTTATTCAATTATTTAAAGAAGCTGGTGTGCAACCAGCCAAGCAGTGTATACAGTTGACAATGTCAGAATTTCGAGATTTATGCTTT]

[-] EMBL CD086371             [GTTTTGGACTGTTTAGCGGAAAAATATGATGTTTTGTTCATTGATATATCCCTACGTTTGATAATGTGATTGTTTTCGAATTCTGTTTTGTATATATGATTTGCAGGATATTCTAAAATTTAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACTGGTGCAGGAGCTTGGGATGAGTCACCTG AGGTGGTAAACTCAAATTTAGTAAAATCTACATCAGAAAATCAAAATGAAACTGCACTGGAAAAAATAAGTTCACCACGCTTGTGTGTTATTGGAAACTTACCATTCAACATTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAGCGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAAGTTGCTGAACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATGTCA                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD086405             [GTTTTGGACTGTTTAGCGGAAAAATATGATGTTTTGTTCATTGACATATCCCTACGTTTGATAATGTGATTGTTTTCGAATTCTGTTTTGTATATATGATTTGCAGGATATTCTAAAATTTAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACTGGTGCAGGAGCTTGGGATGAGTCACCTG AGGTGGTAAACTCAAATTTAGTAAAATCTACATCAGAAAATCAAAATGAAACTGCACTGGAAAAAATAAGTTCACCACGCTTGTGTGTTATTGGAAACTTACCATTCAACATTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAGCGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAAGTTGCTGAACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATGTCA                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD086385             [GTTTTGGACTGTTTAGCGGAAAAATATGATGTTTTGTTCATTGACATATCCCTACGTTTGATAATGTGATTGTTTTCGAATTCTGTTTTGTATATATGATTTGCAGGATATTCTAAAATTTAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACTGGTGCAGGAGCTTGGGATGAGTCACCTG AGGTGGTAAACTCAAATTTAGTAAAATCTACATCAGAAAATCAAAATGAAACTGCACTGGAAAAAATAAGTTCACCACGCTTGTGTGTTATTGGAAACTTACCATTCAACATTTCTACTCCTTTGATCTCTCAATGGCTTCATGATATTGCTGAGCGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAGGTTGCTGAACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTCATGTCA                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD086387             [GTTTTGGACTGTTTAGCGGAAAAATATGATGTTTTGTTCATTGATATATCCCTACGTTTGATAATGTGATTGTTTTCGAATTCTGTTTTGTATATATGATTTGCAGGATATTCTAAAATTTAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACTGGTGCAGGAGCTTGGGATGAGTCACCTG AGGTGGTAAACTCAAATTTAGTAAAATCTACATCAGAAAATCAAAATGAAACTGCACTGAAAAAAATAAGTTCACCACGCTTGTGTGTTATTGGAAACTTACCATTCAACATTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAGCGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAAGTTGCTGAACGACTTGCTGCGGATGTACGGGATGAACAGCGTTCTCGCTTATCTGTTATGTCA                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD083846             [                                                                                                               cacgaggTTTAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACTGGTGCAGGAGCTTGGGATGAGTCACCTGNAGGTGGTAAACTCAAATTTAGTAAAATCTACATCAGAAAATCAAAATGAAACTGCACTGGAAAAAATAAGTTCACCACGCTTGTGTGTTATTGGAAACTTACCATTCAACATTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAGCGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAAGTTGCTGAACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATGTCACAAGCATACTGCGACGTTNAATACATGAAAGATATCCCAGGTACTGCTTTCGTTCCTCCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAAAGCAAACGCTTATTCCTG                                                                                                                                                                           ]
[+] EMBL CD159382             [                                                                                                                                                                                    ACCTG AGGTGGTAAACTCAAATTTAGTAAAATCTACATCAGAAAATCAAAATGAAACTGCACTGGAAAAAATAAGTTCACCACGCTTGTGTGTTATTGGAAACTTACCATTCAACATTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAGCGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAAGTTGCTGAACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATC                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD090034             [                                                                                                                                                                                                                        CATCAGAAAATCAAAATGAAACTGCACTGGAAAAAATAAGTTCACCACGCTTGTGTGTTATTGGAAACTTACCATTCAACATTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAGCGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAAGTTGCTGAACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATGTCACAAGCATACTGCGACGTTAAATACATGAAAGATATCCCAGGTACTGCTTTCGTTCCTCCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAAAGCAACCGCTTATTCCTGTACCGTACCCGTATGTTGAAAAATTGACAAAAGCAAATAGTTCGATGTCTTGAAACATTGTTCCCTTCTAATAGACCTGAACTGGTTATTCAATTATTTAAAGAAGCTGGTGTGCAACCAGCCAAGCAGTGTATACAGTTGACAATGTCAGAATTTCGAGATTTATGCTTT]




>consensus_10277#1
GTTTTGGACTGTTTAGCGGAAAAATATGATGTTTTGTTCATTGATATATCCCTACGTTTG
ATAATGTGATTGTTTTCGAATTCTGTTTTGTATATATGATTTGCAGGATATTCTAAAATT
TAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACTGGTGCAGGAGCTTGGGATGAGTC
ACCTGAGGTGGTAAACTCAAATTTAGTAAAATCTACATCAGAAAATCAAAATGAAACTGC
ACTGGAAAAAATAAGTTCACCACGCTTGTGTGTTATTGGAAACTTACCATTCAACATTTC
TACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAGCGACGAGGAATTTGGCGATA
TGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAAGTTGCTGAACGACTTGCTGCGGA
TGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATGTCACAAGCATACTGCGACGTTNA
ATACATGAAAGATATCCCAGGTACTGCTTTCGTTCCTCCACCAAAAGTAGATGTTGGTGT
TGTTCGTCTAATTCCTTTAAAGCAAACGCTTATTCCTGTACCGTACCCGTATGTTGAAAA
ATTGACAAAAGCAAATAGTTCGATGTCTTGAAACATTGTTCCCTTCTAATAGACCTGAAC
TGGTTATTCAATTATTTAAAGAAGCTGGTGTGCAACCAGCCAAGCAGTGTATACAGTTGA
CAATGTCAGAATTTCGAGATTTATGCTTT

consensusID : consensus_10277#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 679
fasta sequence

                              [TCGGGCGATTCTCCAAAAAG-CTCCACGTCATGTTGCTGTCGTGGAACTAGATAGAAGATTTATTCCTGGTCTTCA-GGAATTACGGCTTGCTGCACTTGAAATGGGGACTCAAATGGATATATACAGACAGGATATTCT-AAATTTAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACTGGTGCAGGAGCTTGGGATGAGTCACCTGAGGTGGTAAACTCAAATNTAGTAAAATCTACATCAGAAAATCAAAATGAAACTGCACTGG-AAAAAATAAGTTCACCACGCTTGTGTGTTATTGGAAACTTACCATTCAACATTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAGCGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAAGTTGCTGAACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATGTCACAAGCATACTGCGACGTTAAATACATGAAAGATATCCCAGGTACTGCTTTCGCTCCTCCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAAAGCAACCGCTTATTCCTGTACCGTACCCGTATGTTGAAAAATTGGTACGTCAGGCATTTCACTTTAGACAAAAGCAAATAGTTCGATGTCTTGAAA]

[-] EMBL CD189200             [TCGGGCGATTCTTCAAAAAGCCTTCACGTCATGTTGCTGTCGTGGAACTAGATAG AGATTTATTCNTTGTC TCAGGGAATTACGGCTTGCTGCACTTGAAATGGGGACTCAAATGGATATATACAGACAGGATATTCT AAATTTAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACTGGTGCAGGAGCTTGGGATGAGTCACCTGAGGTGGTAAACTCAAATNTAGTAAAATCTACATCAGAAAATCAAAATGAAACTGCACTGG AAAAAATAAGTTCACCACGCTTGTGTGTTATTGGAAACTTACCATTCAACATTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAGCGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAAGTTGCTGAACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCACTTATCTGTTATGTCACAAGCATACTGCGACGTTAAATACATGAAAGATATCCCAGGTACTGCTT                                                                                                                                                   ]
[+] EMBL CD183353             [TCGGGCGATTCTCCAAAAAG CTCCACGTCATGTTGTTGTCGTGGAACTAGATAGAAGATTTATTCCCGGTCTTCA GGAATTACGGCTTGCTGCACTTGAAATGGGGACTCAAATGGATATATACAGACAGGATATTCTAAAACTTAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACTGGTGCAGGAGCTTGGGATGAGTCACCTGAGGTGGTAAACTCAAATTTAGTAAAATCTACATCAGAAAATCAAAATGAAACTGCACTGGAAAAAAATAAGTTCACCACGCTTGTGTGTTATTGGAAACTTACCATTCAACGTTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAGCGACGAGG                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD132945             [TCGGGCGATTCTCCAAAAAG CTCCACGTCATGTTGCTGTCGTGGAACTAGATAGAAGATTTATTCCTGGTCTTCA GGAATTACGGCTTGCTGCACTTGAAATGGGGACTCANATGGATATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD179012             [                                                                                                                                                                                                                                                                                                                                                                      ATTGCTGAGCGACGAGGAATTTGGCGATATGGACGAGT CCTTTGACATTGACTTTTCAGAAAGAAGTTGCTGAACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATGTCACAAGCATACTGCGACGTTAAATACATGAAAGATATCCCAGGTACTGCTTTCGCTCCTCCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAAAGCAACCGCTTATTCCTGTACCGTACCCGTATGTTGAAAAATTGGTACGTCAGGCATTTCACTTTAGACAAAAGCAAATAGTTCGATGTCTTGAA ]
[-] EMBL CD155793             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGAACAGCGTTCTCGCTTATCTGTTATGTCACAAGCATACTGCGACGTTAAATACATGAAAGATATCCCAGGTACTACTTTCGTTCCTCCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAAAGCAACCGCTTATTCCTGTACCGTACCCGTATGTTGAAAAATTGGTACGTCAGGCATTTCACTTTAGACAAAAGCAAATAGTTCGATGTCTTGAAA]




>consensus_10277#2
TCGGGCGATTCTCCAAAAAGCTCCACGTCATGTTGCTGTCGTGGAACTAGATAGAAGATT
TATTCCTGGTCTTCAGGAATTACGGCTTGCTGCACTTGAAATGGGGACTCAAATGGATAT
ATACAGACAGGATATTCTAAATTTAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACT
GGTGCAGGAGCTTGGGATGAGTCACCTGAGGTGGTAAACTCAAATNTAGTAAAATCTACA
TCAGAAAATCAAAATGAAACTGCACTGGAAAAAATAAGTTCACCACGCTTGTGTGTTATT
GGAAACTTACCATTCAACATTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCT
GAGCGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAA
GTTGCTGAACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATG
TCACAAGCATACTGCGACGTTAAATACATGAAAGATATCCCAGGTACTGCTTTCGCTCCT
CCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAAAGCAACCGCTTATTCCT
GTACCGTACCCGTATGTTGAAAAATTGGTACGTCAGGCATTTCACTTTAGACAAAAGCAA
ATAGTTCGATGTCTTGAAA

consensusID : consensus_10277#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 276
fasta sequence

                              [TTCCGCCATCTGTTCTCAAGAAATATATGATTTGTCGTAATGGCTATACCTATTATATATCATATTTATGATTCTTTATCAACAATCATTTTTAACTTGTGAATAAATATACTTCTCCCAATATCTTGAGTGGTTGAACATTTTCGTGAATCAATCTTGCATACTTGATACTAAATATATGAATTGTTGTCTCATGTTTACAACTACTAATGAGGTACTTAAAGAATAAATTTACAACTGATATATGCCAGAAAAATTTTTTCATTGAGGGAAAAA]

[-] EMBL AI395460             [TTCCGCCATCTGTTCTCAAGAAATATATGATTTGTCGTAATGGCTATACCTATTATATATCATATTTATGATTCTTTATCAACAATCATTTTTAACTTGTGAATAAATATACTTCTCCCAATATCTTGAGTGGTTGAACATTTTCGTGAATCAATCTTGCATACTTGATACTAAATATATGAATTGTTGTCTCATGTTTACAACTACTAATGAGGTACTTAAAGAATAAATTTACAACTGATATATGCCAGAAAAATTTTTTCATTGAGGGAAAAA]




>consensus_10277#3
TTCCGCCATCTGTTCTCAAGAAATATATGATTTGTCGTAATGGCTATACCTATTATATAT
CATATTTATGATTCTTTATCAACAATCATTTTTAACTTGTGAATAAATATACTTCTCCCA
ATATCTTGAGTGGTTGAACATTTTCGTGAATCAATCTTGCATACTTGATACTAAATATAT
GAATTGTTGTCTCATGTTTACAACTACTAATGAGGTACTTAAAGAATAAATTTACAACTG
ATATATGCCAGAAAAATTTTTTCATTGAGGGAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10277#0      CTCGAGGCCAAAAATTCGGCACGAGGCGACTTGCTGCGGATGTATGGGATGAACAGCGTT 60
consensus_10277#3      ------------------------------------------------------------
consensus_10277#1      ------------------------------------------------------------
consensus_10277#2      ------------------------------------------------------------
                                                                                   

consensus_10277#0      CTCGCTTATCTGTTATGTCACAAGCATACTGCGACGTTAAATACATGAAAGATATCCCAG 120
consensus_10277#3      ------------------------------------------------------------
consensus_10277#1      ------------------------------------------------------------
consensus_10277#2      ------------------------------------------------------------
                                                                                   

consensus_10277#0      GTACTGCTTTCGTTCCTCCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAA 180
consensus_10277#3      ------------------------------------------------------------
consensus_10277#1      ------------------------------------------------------------
consensus_10277#2      -------------------------------------------------------TCGGG 5
                                                                                   

consensus_10277#0      AGCAACCGCTTATTCCTGTACCGTACCCGTATGTTGAAAAATTGACAAAAGCAAATAGTT 240
consensus_10277#3      ------------------------------------------------------------
consensus_10277#1      --------------GTTTTGGACTGTTTAGCGGA---AAAATATGATGTTTTGTTCATTG 43
consensus_10277#2      CGATTCTCCAAAAAGCTCCACGTCATGTTGCTGTCGTGGAACTAGATAGAAGATTTATTC 65
                                                                                   

consensus_10277#0      CGATGTCTTGAAACATTGTTCCCTTCTAATAGACCTGAACTGGTTATTCAATTATTTAAA 300
consensus_10277#3      ------------------------------------------------------------
consensus_10277#1      ATATATCCCTACGTTTGATAATGTGATTGTTTTCGAATTCTGTTTTGTATATATG---AT 100
consensus_10277#2      CTG-GTCTTCAGGAATTACGGCTTGCTGCACTTGAAATGGGGACTCAAATGGATATATAC 124
                                                                                   

consensus_10277#0      GAAGCTGGTGTGCAACCAGCCAAGCAGTGTATACAGTTGACAATGTCAGAATTTCGAGAT 360
consensus_10277#3      ------------------------------------------------------------
consensus_10277#1      TTGCAGGATATTCTAAAATTTAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACTGGT 160
consensus_10277#2      AGACAGGATATTCTAAA-TTTAATTGTGAAGGTATTTTTCCCATCAGTTCTATGACTGGT 183
                                                                                   

consensus_10277#0      TTATGCTTTGTATATCATCGTATTTGTCAGATTGAACCTGATGTATTCGATTTTGATTAT 420
consensus_10277#3      ------------------------------------------------------------
consensus_10277#1      GCAGGAGCTTGGGATGAGTCACCTGAGGTGGTAAACTCAAATTTAGTAAAATCTACATCA 220
consensus_10277#2      GCAGGAGCTTGGGATGAGTCACCTGAGGTGGTAAACTCAAATNTAGTAAAATCTACATCA 243
                                                                                   

consensus_10277#0      CAAACTCGAGTTAATTTACCATTGTGGTATAATCGTAAGAAAATTCAACGAGAAATGTTA 480
consensus_10277#3      ------------------------------------------------------------
consensus_10277#1      GAAAATCAAAATGAAACTGCACTGGAAAAAATAAGTTCACCACGCTTGTGTGTTATTGGA 280
consensus_10277#2      GAAAATCAAAATGAAACTGCACTGGAAAAAATAAGTTCACCACGCTTGTGTGTTATTGGA 303
                                                                                   

consensus_10277#0      GACAGTCCAACTGGTCTTACAGCCAATCGTGTTCGTCAAGAAATATATGGATTTAGTCAG 540
consensus_10277#3      -----------------TTCCGCCATC--TGTTC-TCAAGAAATATATGA--TTTGTC-G 37
consensus_10277#1      AACTTACCATTCAACATTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAG 340
consensus_10277#2      AACTTACCATTCAACATTTCTACTCCTTTGATTTCTCAATGGCTTCATGATATTGCTGAG 363
                                        * *  *        **  ****    *  ***   **  *  *

consensus_10277#0      TAATG-GCTATACGCTATTATTATTA--TCATATTGTAATCGATTCTTTAATCAACAATT 597
consensus_10277#3      TAATG-GCTATAC-CTATTATA--TA--TCATATT-TA--TGATTCTTTA-TCAACAATC 87
consensus_10277#1      CGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAAGTT 400
consensus_10277#2      CGACGAGGAATTTGGCGATATGGACGAGTCCCTTTGACATTGACTTTTCAGAAAGAAGTT 423
                         * * *  **       ***       **   **      ** * ** *   *  * * 

consensus_10277#0      CATTTGTATAACTTG-TGAATAAATATACTTCTTCCAATATTTTGAAGTGGTTGAACATT 656
consensus_10277#3      ATTTT---TAACTTG-TGAATAAATATACTTCTCCCAATATCTTGA-GTGGTTGAACATT 142
consensus_10277#1      GCTGA--ACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATGT 458
consensus_10277#2      GCTGA--ACGACTTGCTGCGGATGTATGGGATGAACAGCGTTCTCGCTTATCTGTTATGT 481
                         *       ***** **   *  ***        **   *  *    *   **     *

consensus_10277#0      TTACGATGAAT--CAATCTTGCATACTTGATACGTAAATATATGAATTGTTGTCTCATGT 714
consensus_10277#3      TTC--GTGAAT--CAATCTTGCATACTTGATAC-TAAATATATGAATTGTTGTCTCATGT 197
consensus_10277#1      CACAAGCATACTGCGACGTTNAATACATGAAAGATATCC-CAGGTACTGCTTTCGTTCCT 517
consensus_10277#2      CACAAGCATACTGCGACGTTAAATACATGAAAGATATCC-CAGGTACTGCTTTCGCTCCT 540
                                *   * *  **  **** *** *  **     * * * ** * **     *

consensus_10277#0      TTATCAACTACTAATGAANG-ATACTTNTAAGGATTAATTTATCACTGTATTATAACAGT 773
consensus_10277#3      TTA-CAACTACTAATGA--G-GTACTTA-AAGAATAAATTTACAACTGATATATGCCAGA 252
consensus_10277#1      CCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAAAGCAAACGCTTATTCCT 577
consensus_10277#2      CCACCAAAAGTAGATGTTGGTGTTGTTCGTCTAATTCCTTTAAAGCAACCGCTTATTCCT 600
                         * ***      ***   *  *  **      **   ****   *       *      

consensus_10277#0      AAAAATTTTTTGCAATGGAAAAAAAAAAAAAAAA-------------------------- 807
consensus_10277#3      AAAATTTTTTCATTGAGGGAAAAA------------------------------------ 276
consensus_10277#1      GTACCGTACCCGTATGTTGAAAAATTGACAAAAGCAAATAGTTCGATGTCTTGAAACATT 637
consensus_10277#2      GTACCGTACCCGTATGTTGAAAAATTGGTA-------------------CGTCAGGCATT 641
                         *   *            *****                                    

consensus_10277#0      ------------------------------------------------------------
consensus_10277#3      ------------------------------------------------------------
consensus_10277#1      GTTCCCTTCTAATAGACCTGAACTGGTTATTCAATTATTTAAAGAAGCTGGTGTGCAACC 697
consensus_10277#2      --TCACTT----TAGACAAAAGCAAATAGTTCGATGTCTTGAAA---------------- 679
                                                                                   

consensus_10277#0      ----------------------------------------------------
consensus_10277#3      ----------------------------------------------------
consensus_10277#1      AGCCAAGCAGTGTATACAGTTGACAATGTCAGAATTTCGAGATTTATGCTTT 749
consensus_10277#2      ----------------------------------------------------