These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10279#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 939 fasta sequence [GACATTTGACAGAAAAGCAGAATTAGAGATGAAGAAAGCGAAACTAGCTATCCTTAGGGAAAACAAAATTAAAAGAGATAAGGTGAAGGTTGAGGGGACAAATGGGGGAACTCAAGATAATCTCAATAATTATGGTTCGACCCAAGGTCTTCGGATTGAAACTGAGGAGTTATTAAGAACTCTTGGGATTCCTGTTTCGGATGAGCCGTTGCCTCAAGTTTCAGAAGATCGTATTCTTGCTAAAGGAACTTCAGATTCACTACATACGAAAACTGACAGCCAGAAAAAACGCAAAAGGTTGGGGTTTTCTCAAATAAACGAAATCAATGTTCCCCCCAAAGAAAACATATCTTATTCTAAAATCACTCAAACATTCGAGTCTTATGTTCCACAGCATGTTACCAGTGGCGTTCGTACTGATTCTCCACGTGAGGTCATAGGTTCTCCAAAGTTCATGACTCATTTAGAATGGGATGATGAATTTTCTACCGTTCTGCCTTTCGATGAATCGGTAAATGAGACTTTTGATATGTCTGCTGTAATCAATGAAATACACAAAATGCCACTCGTTAGTTCGATTGATGCTGCAAAGACTCCTGCAGATACAGAACGAGAGAACGAACATTTTAGGGCACTAAAAGTAATACAACTCACAGACGAAGAAAGAGATGGAATTATGAAATCAGATAGATTTCATCGTTTCTTTGACAGAGCATCACGACTGATAGAACGAGCATTAGATGAACCTTCAGACATGTTTATTGATTATAGTGGTGGAGATCATGATGATACCGGAAATACCCAACGTCATCAACTTGTAAGGTTTGGTCGTGACTTTTTTGATGATCGATGGTCAAGAAGACGCCTAGTTACAGCATTGGATTGGTCACCAATTTTTCGTGAGTTACTTCTTGGTGCTTATCATGCAAATGATGAAGC] [+] EMBL CD158526 [GACATTTGACAGAAAAGCAGAATTAGAGATGAAGAAAGCGAAACTAGCTATCCTTAGGGAAAACAAAATTAAAAGAGATAAGGTGAAGGTTGAGGGGACAAATGGGGGAACTCAAGATAATCTCAATAATTATGGTTCAACCCAAGGTCTTCGGATTGAAACTGAGGAGTTATTAGGAACTCTTGGGATTCCT ] [+] EMBL CD158844 [ GAAACTAGCTATCCTTAGGGAAAACAAAATTAAAAGAGATAAGGTGAAGGTTGAGGGGACAAATGGGGGAACTCAAGATAATCTCAATAATTATGGTTCGACCCAAGGTCTTCGGATTGAAACTGAGGAGTTATTAAGAACTCTTGGGATTCCT ] [+] EMBL AI976648 [ GATAATCTCAATAATTATGGTTCGACCCAAGGTCTTCGGATTGAAACTGAGGAGTTATTAAGAACTCTTGGGATTCCTGTTTCGGATGAGCCGTTGCCTCAAGTTTCAGAAGATCGTATTCTTGCTAAAGGAACTTCAGATTCACTACATACGAAAACTGACAGCCAGAAAAAACGCAAAAGGTTGGGGTTTTCTCAAATAAACGAAATCAATGTTCCCCCCAAAGAAAACATATCTTATTCTAAAATCACTCAAACATTCGAGTCTTATGTTCCACAGCATGTTACCAGTGGCGTTCGTACTGATTCTCCACGTGAGGTCATAGGTTCTCCAAAGTTCATGACTCATTTAGAATGGGATGATGAATTTTCTACCGTTCTGCCTTT ] [+] EMBL CD129421 [ TAATTATGGTTCGACCCAAGGTCTTCGGATTGAAACTGAGGAGTTATTAAGAACTCTTGGGATTCCTGTTTCGGATGAGCCGTTGCCTCAAGTTTCAGAAGATCGTATTCTTGCTAAAGGAACTTCAGATTCACTACATACGAAAACTGACAGCCAGAAAAAACGCAAAAGGTTGGGGTTTTCTCAAATAAACGAAATCAATGTTCCCCCCAAAGAAAACATATCTTATTCTAAAATCACTCAAACATTCGAGTCTTATGTTCCACAGCATGTTACCAGTGGCGTTCGTACTGATTCTCCACGTGAGGTCATAGGTTCTCCAAAGTTCATGACTCATTTAGAATGGGATGATGAATTTTCTACCGTTCTGCCTTTCGATGAATCGGTAAATGAGACTTTTGATATGTCTGCTGTAATCAATGAAATACACAAAATGCCACTCGTTAGTTCGATTGATGCTGCAAAGACTCCTGCAGATACAGAACGAGAGAACGAACATTTTAGGGCACTAAAAGTAATACAACTCACAGACGAAGAAAGAGATGGAATTATGAAATCAGATAGATTTCATCGTTTCTTTGACAGAGCATCACGACTGATAGAACGAGCATTAGATGAACCTTCAGACATGTTTATTGATT ] [+] EMBL CD067036 [ TAATTATGGTTCGACCCAAGGTCTTCGGATTGAAACTGAGGAGTTATTAAGAACTCTTGGGATTCCTGTTTCGGATGAGCCGTTGCCTCAAGTTTCAGAAGATCGTATTCTTGCTAAAGGAACTTCAGATTCACTACATACGAAAACTGACAGCCAGAAAAAACGCAAAAGGTTGGGGTTTTCTCAAATAAACGAAATCAATGTTCCCCCCAAAGAAAACATATCTTATTCTAAAATCACTCAAACATTCGAGTCTTATGTTCCACAGCATGTTACCAGTGGCGTTCGTACTGATTCTCCACGTGAGGTCATAGGTTCTCCAAAGTTCATGACTCATTCAGAATGGGATGATGAATTTTCTACCGTTCTGCCTTTCGATGAGTCGGTAGATGAGACTTTTGATATGTCTGCTGT ] [+] EMBL CD067504 [ TAATTATGGTTCGACCCAAGGTCTTCCGATTGAAACTGAGGAGTTATTAAGAACTCTTGGGATTCCTGTTTCGGATGAGCCGTTGCCTCAAGTTTCAGAAGATCGTATTCTTGCTAAAGGAACTTCAGATTCACTACATACGAAAACTGACAGCCAGAAAAAACGCAAAAGGTTGGGGTCTTCTCAAATAAACGAAATCAATGTTCCCCCCAATGAAAACATATCTTATTCTAAAATCACTCAAACATTCGAGTCTTATGTTCCACAGCATGTTACCAGTGGCGTTCGTACTGATTCTCCACGTGAGGTCATAAGTTCTCCAAAGTTCATGACTCATTTAAAATGGGATGATGAAT ] [+] EMBL CD066841 [ TAATTATGGTTCGACCCAAGGTCTTCGGATTGAAACTGAGGAGTTATTAAGAACTCTTGGGATTCCTGTTTCGGATGAGCCGTTGCCTCAAGTTTCAGAAGATCGTATTCTTGCTAAAGGAACTTCAGATTCACTACATACGAAAACTGACAGCCAGAAAAAACGCAAAAGGTTGGGGTTTTCTCAAATAAACGAAATCAATGTTCCCCCCAAAGAAAACATATCTTATTCTAAAATCACTCAAACATTCGAGTCTAATGTTCCACAGCATGTTACCAGTGGCGTTCGTACTGATTCTCCACGTGAGGTCATAGGTTCTCCAAAGTTCATGACTCATTTAGAATGGGATGATGAATTTTCTACCGTTCTGCCTTTCGATGAATCGGGTAATAAGACTTTTGATATGTCTGCTGTAATCAATGAAATA ] [+] EMBL CD191804 [ CCGTTGCCTCAAGTTTCAGAAGATCGTATTCTTGCTAAAGGAACTTCAGATTCACTACATACGAAAACTGACAGCCAGAAAAAACGCAAAAGGTTGGGGTTTTCTCAAATAAACGAAATCAATGTTCCCCCCAAAGAAAACATATCTTATTCTAAAATCACTCAAACATTCGAGTCTTATGTTCCACAGCATGTTACCAGTGGCGTTCGTACTGATTCTCCACGTGAGGTCATAGGTTCTCCAAAGTTCATGACTCATTTAGAATGGGATGATGAATTTTCTACCGTTCTGCCTTCCGATGAATCGGTAAATGAGACTTTTGATATGTCTGCTGTAATCAATGAAATACACAAAATGCCACTCGTTAGTTCGATTGATGCTGCAAAGACTCCTGCAGATACAGAACGAGAGAACGAACATTTTAGGGCACTAAAAGTAATACAACTCACAGACGAAGAAAGAGATGGAATTATGAAATCAGATAGATTTCATCGTTTCTTTGACAGAGCATCA ] [+] EMBL CD191831 [ CCGTTGCCTCAAGTTTCAGAAGATCGTATTCTTGCTAAAGGAACTTCAGATTCACTACATACGAAAACTGACAGCCAGAAAAAACGCAAAAGGTTGGGGTTTTCTCAAATAAACGAAATCAATGTTCCCCCCAAAGAAAACATATCTTATTCTAAAATCACTCAAACATTCGAGTCTTATGTTCCACAGCATGTTACCAGTGGCGTTCGTACTGATTCTCCACGTGAGGTCATAGGTTCTCCAAAGTTCATGACTCATTTAGAATGGGATGATGAATTTTCTACCGTTCTGCCTTCCGATGAATCGGTAAATGAGACTTTTGATATGTCTGCTGTAATCAATGAAATACACAAAATGCCACTCGTTAGTTCGATTGATGCTGCAAAGACTCCTGCAGATACAGAACGAGAGAACGAACATTTTAGGGCACTAAAAGTAATACAACTCACAGACGAAGAAAGAGATGGAATTATGAAATCAGATAGATNTCATCGTTTCTTTGACAGAGCATCA ] [+] EMBL CD190973 [ GAAGATCGTATTCTTGCTAAAGGAACTTCAGATTCACTACATACGAAAACTGACAGCCAGAAAAAACGCAAAAGGTTGGGGTTTTCTCAAATAAACGAAATCAATGTTCCCCCCAAAGAAAACATATCTTATTCTAAAATCACTCAAACATTCGAGTCTTATGTTCCACAGCATGTTACCAGTGGCGTTCGTACTGATTCTCCACGTGAGGTCATAGGTTCTCCAAAGTTCATGACTCATTTAGAATGGGATGATGAATTTTCTACCGTTCTGCCTTTCGATGAATCGGTAAATGAGACTTTTGATATGTCTGCTGTAATCAATGAAATACACAAAATGCCACTCGTTAGTTCGATTGATGCTGCA ] [-] EMBL CD147260 [ CTTCAGATTCACTACATACGAAAACTGACAGCCAGAAAAAACGCAAAAGGTTGGGGTTTTCTCAAATAAACGAAATCAATGTTCCCCCCAAAGAAAACATATCTTATTCTAAAATCACTCAAACATTCGAGTCTTATGTTCCATAGCATGTTACCAGTGGCGTTCGTACTGATTCTCCACGTGAGGTCATAGGTTCTCCAAAGTTCATGACTCATTTAGAATGGGATGATGAATTTTCTACCGTTCTGCCTTTCGATGAATCGGTAAATGAGACTTTTGATATGTCTGCTGTAATCAATGAAATACACAAAATGCCACTCGTTAGTTCGATTGATGCTGCAAAGACTCCTGCAGATACAGAACGAGAGAACGAACATTTTAGGGCACTAAAAGTAATACAACTCACAGACGAAGAAAGAGATGGAATTATGAAATCAGATAGATTTCATCGTTTCTTTGACAGAGCATCACGACTGATAGAACGAGCATTAGATGAACCTTCAGACATGTTTATTGATTATAGTGGTGGAG ] [-] EMBL CD147036 [ CAAAGAAAACATATCTTATTCTAAAATCACTCAAACATTCGAGTCTTATGTTCCACAGCATGTTACCAGTGGCGTTCGTACTGATTCTCCACGTGAGGTCATAGGTTCTCCAAAGTTCATGACTCATTTAGAATGGGATGATGAATTTTCTACCGTTCTGCCTTTCGATGAATCGGTAAATGAGACTTTTGATATGTCTGCTGTAATCAATGAAATACACAAAATGCCACTCGTTAGTTCGATTGATGCTGCAAAGACTCCTGCAGATACAGAACGAGAGAACGAACATTTTAGGGCACTAAAAGTAATACAACTCACAGACGAAGAAAGAGATGGAATTATGAAATCAGATAGATTTCATCGTTTCTTTGACAGAGCATCACGACTGATAGAACGAGCATTAGATGAACCTTCAGACATGTTTATTGATTATAGTGGTGGAG ] [-] EMBL CD066911 [ AACGAGAGAACGAACATTTTAGGGCACTAAAAGTAATACAACTCACAGACGAAGAAAGAGATGGAATTATGAAATCAGATAGATTTCATCGTTTCTTTGACAGAGCATCACGACTGATAGAACGAGCATTAGATGAACCTTCAGACATGTTTATTGATTATAGTGGTGGAGATCATGATGATACCGGAAATACCCAACGTCATCAACTTGTAAGGTTTGGTCGTGACTTTTTTGATGATCGATGGTCAAGAAGACGCCTAGTTACAGCATTGGATTGGTC ] [-] EMBL CD067193 [ CGAGAGATCGATCATTTGAGGGCACTAAAAGTAATACAACTCACAGACGAAGAGAGAGATGGAATTATGAAATCAGATAGATTTCATCGTTTCTTTGACAGAGCATCTCGACTGATAGACCGAGCATTAGATGAACCTTCAGACATGTTTATTGATTATAGTGGTGGAGATCATGATGATACCGGAAATACCCAACGTCATCAACTTGTAAGGTTTGGTCGTGACTTTTTTGATGATCGATGGTTAAGATGACGCCTAGTTACAGCATTGGATTGGTCACCAATTTTTCGTGAGTTACTTCTTGGTGCTTATCATGCAAATGATGAAGC] [-] EMBL CD066829 [ cCAACTCACAGACGAAGAAAGAGATGGAATTATGAAATCAGATAGATTTCATCGTTTCTTTGACAGAGCATCACGACTGATAGAACGAGCATTAGATGAACCTTCAGACATGTTTATTGATTATAGTGGTGGAGATCATGATGATACCGGAAATACCCAACGTCATCAACTTGTAAGGTTTGGTCGTGACTTTTTTGATGATCGATGGTCAAGAAGACGCCTAGTTACAGCATTGGATTGGTC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||