cluster # 10288

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Schistosoma mansoni
cluster # 10288 cluster # 10288 Sequences # 15 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10288#0 length = 934 sequences # 10
consensus_10288#1 length = 545 sequences # 1

consensus_10288#2 length = 378 sequences # 3
consensus_10288#3 length = 294 sequences # 1

consensusID : consensus_10288#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 934
fasta sequence

                              [CTCGAGGGCCAGAATTCGGCACGAGGGCGGATTTAATCATGTAAAACCGAATGAATATAGACCTCGTCTTTTAATGTTTCATTCAGTTGATCGTAAAACTATGGAATTAATTGAAGTGCCTTTTTCCAGACGTTCTTTGGATTCCACAGATGTCTTTATTTTGGATATGGGTAATCAAGCATACCAGTGGAATGGACGTGGGTGCAGTAAAGAAGAAAAATTCAAGGCAAGTCAGTTTTTACAACAACTCGAGTGTGATCGTAATGGAAGGTGTAAAACTGAGGTGACAGATGAAGATGGTTCTGAGGAACATAAAAAGTTCATTAGTTTATTGCCAGATGTTGAAATAGGAGAAAAAGTTCAACAAAAAATAGGCAAGAAAGTAATTTACAGAGTTTCAGATGAAAGTGGTAAAATGGAAATTTCACTTGTATGTGAAAATGCATTACCAAAATCGTCTCTAACAGAAGACGATGTGTATCTCATTGACAGTGGACAATCTCTATTTGTTTACATTGGATTGAAATGTAGTAGGCGAGAAAAATTGGATGCGTTGTCCCATGCCCATGAATACTTACAAAAAACTGATCATCCATTCGCTCCAATCACTGTTGTATCGAATAATCGTAAATCGAAAGAATTGGATAAAGTGCTTGAATAGTATCTAACAACAGTTAGAAAAAGAAAGGGGAATCATCATGTCAACTAAAAGAAAAGCGGAGTGAAATTTCAAATAATATTAATTCTAACAGTATTCATAATATCATTACAATACATTCTGAAGTTATATTTACACTTATAAAGTTTATTATTATATGCATGAACATTATTTATTTATGCTTTAATTATCTTGTTATTTATTCAACCAATCTTGGTTTGAATA-T-ATCTGTGTTATGTGCTT-ACA-AATAAATAATTGTTTTTTTTCAAAAAAAAA]

[+] EMBL CD079394             [CTCGAGGGCCAGAATTCGGCACGAGGGCGGATTTAATCATGTAAAACCGAATGAATATAGACCTCGTCTTTTAATGTTTCATTCAGTTGATCGTAAAACTATGGAATTAATTGAAGTGCCTTTTTCCAGACGTTCTTTGGATTCCACAGATGTCTTTATTTTGGATATGGGTAATCAAGCATACCAGTGGAATGGACGTGGGTGCAGTAAAGAAGAAAAATTCAAGGCAAGTCAGTTTTTACAACAACTCGAGTGTGATCGTAATGGAAGGTGTAAAACTGAGGTGACAGATGAAGATGGTTCTGAGGAACATAAAAAGTTCATTAGTTTATTGCCAGATGTTGAAATAGGAGAAAAAGTTCAACAAAGAATAGGCAAGAAAGTAATTTACAGAGTTTCAGATGAAAGTGGTAAAATGGAAATTTCACTTGTATGTGAAAATGCATTACCAAAATCGTCTCTAACAGAAGACGATGTGTATCTCATTGACAGAGGACAATCTCTATTTGCTTACATTGGATTGAAATGTAGTAGGCGAGAAAAATTGGATGCGTTGTCCCATGCCCATGAATACTTACAAAAGACTGATCATCCATTCGCTCCAATCACTGCTGTATCGAATAATCGTANATCGAAAGAATTGGATAAAGTGCTTGAATAGTATCTAACAACAGCTAGCATGAGACAGGGGAATCATCATGTCAACTACAAGATAAGCGGAGTGAAATTTCGAATAATATTAATTCTAACAGTATTCAGTAGATCATTACAATACATTCTGGAGNTATATGTACACTTATAAAGNTTATTATTATATGCATGAACA TATTTA TTATGCTTT AGTATGCTGGTA TTATTC ACCAATCTTGG NTG ATA T ANCTG GGTA GNGCTTCAAA AATAA                         ]
[+] EMBL CD079393             [                         GGCGGATTTAATCATGTAAAACCGAATGAATATAGACCTCGTCTTTTAATGTTTCATTCAGTTGATCGTAAAACTATGGAATTAATTGAAGTGCCTTTTTCCAGACGTTCTTTGGATTCCACAGATGTCTTTATTTTGGATATGGGTAATCAAGCATACCAGTGGAATGGACGTGGGTGCAGTAAAGAAGAAAAATTCAAGGCAAGTCAGTTTTTACAACAACTCGAGTGTGATCGTAATGGAAGGTGTAAAACTGAGGTGACAGATGAAGATGGTTCTGAGGAACATAAAAAGTTCATTAGTTTATTGCCAGATGTTGAAATAGGAGAAAAAGTTCAACAAAAAATAGGCAAGAAAGTAATTTACAGAGTTTCAGATGAAAGTGGTAAAATGGAAATTTCACTTGTATGTGAAAATGCATTACCAAAATCGTCTCTAACAGAAGACGATGTGTATCTCATTGACAGTGGACAATCTCTATTTGTTTACATTGGATTGAAATGTAGTAGGCGAGAAAAATTGGATGCGTTGTCCCATGCCCATGAATACTTACAAAAAACTGATCATCCATTCGCTCCAATCACTGTTGTATCGAATAATCGTANATCGAAAGAATTGGATAAAGTGCTTGAATAGTATCTAACAACAGTTAGAANAAGAAAGGGGAATCATCATGTCAACTANNAGAAAAGCGGAGTGAAATTTCAAATAATATTAATTCTAACAGTATTCATAATATCATTAC ATACATTCTG AGTTATATTTACAC TAT AAG TTATTA TATATGCATG ACATTA TTA TTATGC TTANNTATC TG TA TTA TC ACCCATC TGG  TG ATA T ATCTG G TATG GCTT  CATAAT                           ]
[+] EMBL SMAA69089            [                                                                       TAATGTTTCATTCAGTTGATCGTAAAACCATGGAATTAATTGAAGTGCCTTTTTCCAGACGTTCTTTGGATTCCACAGATGTCTTTATTTTGGATATGGGTAATCAAGCATACCAGTGGAATGGACGTGGGTGCAGTAAAGAAGAAAAATTCAAGGCAAGTCAGTTTTTACAACAACTCGAGTGTGATCGTAATGGAAGGTGT AAACTGAGGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AI977439             [                                                                                                                                           GATTCCACAGATGTCTTTATTTTGGATATGGGTAATCAAGCATACCAGTGGAATGGACGTGGGTGCAGTAAAGAAGAAAAATTCAAGGCAAGTCAGTTTTTACAACAACTCGAGTGTGATCGTAATGGAAGGTGTAAAACTGAGGTGACAGATGAAGATGGTTCTGAGGAACATAAAAAGTTCATTAGTTTATTGCCAGATGTTGAAATAGGAGAAAAAGTTCAACAAAAAATAGGCAAGAAAGTAATTTACAGAGTTTCAGATGAAAGTGGTAAAATGGAAATTTCACTTGTATGTGAAAATGCATTACCAAAATCGTCTCTAACAGAAGACGATGTGTATCTCATTGACAGTGGACAATCTCTATTTGTTTACATTGGAGTGAAATGTAGTATGCGAGAAAAATTGGATGCGTTGTCCCATGCCCAT                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD073668             [                                                                                                                                                                                                                                                                 ATCGTAATGGAAGGTGTANAACTGAGGTGACAGATGAAGATGGTTCTGAGGAACATAAAAAGTTCATTAGTTTATTGCCAGATGTTGAAATAGGAGAAAAAGTTCAACAAAAAATAGGCAAGAAAGTAATTTACAGAGTTTCAGATGAAAGTGGTAAAATGGAAATTTCACTTGTATGTGAAAATGCATTACCAAAATCGTCTCTAACAGAAGACGATGTGTATCTCATTGACAGTGGACAATCTCTATTTGTTTACATTGGATTGAAATGTAGTAGGCGAGAAAAATTGGATGCGTTGTCCCATGCCCATGAATACTTACAAAAAACTGATCATCCATTCGCTCCAATCACTGTTGTATCGAATAATCGTAAATCGAAAGAATTGGATAAAGTGCTTGAATAGTATCTAACAACAGTTAGAAAAAGAAAGGGGAATCATCATGTCAACTAAAAGAAAAGCGGAGTGAAATTTCAAATAATATTAATTCTAACAGTATTCATAATATCATTACAATACATTCTGAAGTTATATTTACACTTATAAAGTTTATTATTATATGCATGAACATTATTTATTTATGCTTTAATTATCTTGTTATTTATTCAACCAATCTTGGTTTGAATA TGATCTGTGTTATGTGCTT ACA AATAAATAATTGT                 ]
[+] EMBL CD083783             [                                                                                                                                                                                                                                                                         GGAAGGTGT AAACTGAGGTGACAGATGAAGATGGTTCTGAGGAACATAAAAAGTTCATTAGTTTATTGCCAGATGTTGAAATAGGAGAAAAAGTTCAACAAAAAATAGGCAAGAAAGTAATTTACAGAGTTTCAGATGAAAGTGGTAAAATGGAAATTTCACTTGTATGTGAAAATGCATTACCAAAATCGTCTCTAACAGAAGACGATGTGTATCTCATTGACAGTGGACAATCTCTATTTGTTTACATTGGAGTGAAATGTAGTAGGCGAGAAAAATTGGATGCGTTGTCCCATGCCCATGAATACTTACAAAAAACTGATCATCCATTCGCTCCAATCACTGTTGTATCGAATAATCGTAAATCGAAAGAATTGGATAAAGTGCTTGAATAGTATCTAACAACAGTTAGAAAAAGAAAGGGGAATCATCATGTCAACTAAAAGAAAAGCGGAGTGAAATTTCAAATAATATTAATTCTAACAGTATTCATA                                                                                                                                                                                  ]
[-] EMBL CD073669             [                                                                                                                                                                                                                                                                                               CAGATGAAGATGGTTCTGAGGAACATAAAAAGTTCATTAGTTTATTGCCAGATGTTGAAATAGGAGAAAAAGTTCAACAAAAAATAGGCAAGAAAGTAATTTACAGAGTTTCAGATGAAAGTGGTAAAATGGAAATTTCACTTGTATGTGAAAATGCATTACCAAAATCGTCTCTAACAGAAGACGATGTGTATCTCATTGACAGTGGACAATCTCTATTTGTTTACATTGGATTGAAATGTAGTAGGCGAGAAAAATTGGATGCGTTGTCCCATGCCCATGAATACTTACAAAAAACTGATCATCCATTCGCTCCAATCACTGTTGTATCGAATAATCGTAAATCGAAAGAATTGGATAAAGTGCTTGAATAGTATCTAACAACAGTTAGAAAAAGAAAGGGGAATCATCATGTCAACTAAAAGAAAAGCGGAGTGAAATTTCAAATAATATTAATTCTAACAGTATTCATAATATCATTACAATACATTCTGAAGTTATATTTACACTTATAAAGTTTATTATTATATGCATGAACATTATTTATTTATGCTTTAATTATCTTGTTATTTATTCAACCAATCTTGGTTTGAATA TGATCTGTGTTATGTGCTTAAAA AATAAATAATTGT                 ]
[+] EMBL CD078571             [                                                                                                                                                                                                                                                                                                                 AGGAACATAAAAAGTTCATTAGTTTATTGCCAGATGTTGAAATAGGAGAAAAAGTTCAACAAAAAATAGGCAAGAAAGTAATTTACAGAGTTTCAGATGAAAGTGGTAAAATGGAAATTTCACTTGTATGTGAAAATGCATTACCAAAATCGTCTCTAACAGAAGACGATGTGTATCTCATTGACAGTGGACAATCTCTATTTGTTTACATTGGAGTGAAATGTAGTAGGCGAGAAAAATTGGATGCGTTGTCCCATGCCCATGAATACTTACAAAAAACTGATCATCCATTCGCTCCAATCACTGTTGTATCGAATAATCGTAAATCGAAAGAATTGGATAAAGTGCTTGAATAGTATCTAACAACAGTTAGAAAAAGAAAGGGGAATCATCATGTCAACTAAAAGAAAAGCGGAGTGAAATTTCAAATAATATTAATTCTAACAGTATTCATAATATCATTACAATACATTCTGAAGTTATATTTACACTTATAAAGTTTATTATTATATGCATGAACATTATTTATTTATGCTTTAATTATCTTGNTATTTATTCAACCAATCTTGNTTTGAATATT ATCT                                                ]
[-] EMBL AI975364             [                                                                                                                                                                                                                                                                                                                                                                                             AGTAATTTACAGAGTTTCAGATGAAAGTGGTAAAATGGAAATTTCACTTGTATGTGAAAATGCATTACCAAAATCGTCTCTAACAGAAGACGATGTGTATCTCATTGACAGTGGACAATCTCTATTTGTTTACATTGGAGTGAAATGTAGTAGGCGAGAAAAATTGGATGCGTTGTCCCATGCCCATGAATACTTACAAAAAACTGATCATCCATTCGCTCCAATCACTGTTGTATCGAATAATCGTAAATCGAAAGAATTGGATAAAGTGCTTGAATAGTATCTAACAACAGTTAGAAAAAGAAAGGGGAATCATCATGTCAACTAAAAGAAAAGCGGAGTGAAATTTCAAATAATATTAATTCTAACAGTATTCATAATATCATTACAATACATTCTGAAGTTATATTTACACTTATAAAGTTTATTATTATATGCATGAACATTATTTATTTATGCTTTAATTATCTTGTTATTTATTCAACCAATCTTGGTTTGAATATT ATCTGTGTTATGGGCTT TCA AATAAATAATTGT                 ]
[-] EMBL SMAA69065            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       atGAAAGAATTGGATAAAGTGCTTGAATAGTATCTAACAACAGTTAGAAAAAGAAAGGGGAATCATCATGTCAACTAAAAGAAAAGCGGAGTGAAATTTCAAATAATATTAATTCTAACAGTATTCATAATATCATTACAATACATTCTGAAGTTATATTTACACTTATAAAGTTTATTATTATATGCATGAACATTATTTATTTATGCTTTAATTATCTTGTTATTTA TCAACCAATCTTGGTTTGAATATT ATCTGTGTTATGTGCTT TCA AATAAATAATTGTTTTTTTTCAAAAAAAAA]




>consensus_10288#0
CTCGAGGGCCAGAATTCGGCACGAGGGCGGATTTAATCATGTAAAACCGAATGAATATAG
ACCTCGTCTTTTAATGTTTCATTCAGTTGATCGTAAAACTATGGAATTAATTGAAGTGCC
TTTTTCCAGACGTTCTTTGGATTCCACAGATGTCTTTATTTTGGATATGGGTAATCAAGC
ATACCAGTGGAATGGACGTGGGTGCAGTAAAGAAGAAAAATTCAAGGCAAGTCAGTTTTT
ACAACAACTCGAGTGTGATCGTAATGGAAGGTGTAAAACTGAGGTGACAGATGAAGATGG
TTCTGAGGAACATAAAAAGTTCATTAGTTTATTGCCAGATGTTGAAATAGGAGAAAAAGT
TCAACAAAAAATAGGCAAGAAAGTAATTTACAGAGTTTCAGATGAAAGTGGTAAAATGGA
AATTTCACTTGTATGTGAAAATGCATTACCAAAATCGTCTCTAACAGAAGACGATGTGTA
TCTCATTGACAGTGGACAATCTCTATTTGTTTACATTGGATTGAAATGTAGTAGGCGAGA
AAAATTGGATGCGTTGTCCCATGCCCATGAATACTTACAAAAAACTGATCATCCATTCGC
TCCAATCACTGTTGTATCGAATAATCGTAAATCGAAAGAATTGGATAAAGTGCTTGAATA
GTATCTAACAACAGTTAGAAAAAGAAAGGGGAATCATCATGTCAACTAAAAGAAAAGCGG
AGTGAAATTTCAAATAATATTAATTCTAACAGTATTCATAATATCATTACAATACATTCT
GAAGTTATATTTACACTTATAAAGTTTATTATTATATGCATGAACATTATTTATTTATGC
TTTAATTATCTTGTTATTTATTCAACCAATCTTGGTTTGAATATATCTGTGTTATGTGCT
TACAAATAAATAATTGTTTTTTTTCAAAAAAAAA

consensusID : consensus_10288#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 545
fasta sequence

                              [AAATGTAGTAGGCGAGAAAAATTGGATGCGTTGTCCCATGCCCATGTAAATCATTTGAAATTTTCAGTTAAAGATTTGTTTTATTCGTTTAATATTTTTTGTAATGATATTGTACATCATTTGTACTTCACTTAATTGGAGATAATGAATTCCGTACGAGTTTAGTTCTCTGAGCATGTTGATTTAATTATGAAGCGTTCATTATCACTCTGGACAAAATTATTAGCACAAACTTTCATATAAGAGTGATCTAGTCGAATTTCTCCGTATTATGACTAACAGCTTTTCCTGTCAACTTTGATGTTGGTTAGTTGCTTTTAACCCTTGTTTTATTGTTGCTCACATATTTATTTTCATTATCTTCACGTTATTGATCTGATTCTTAACGTCATGGTATTACAAGATCTTTCCAATTGTTCTATAAGTTGGATGGATTTCGATATGTTTGTTGATTGTTGATTGAGCTCAGTGCGAAGCTTCTACAAATTCTCTGATCTTCTAAGTACTCTCTCTGTCCGAGATCTCAACATTTTCCCAGTCGAACG]

[+] EMBL CD119868             [AAATGTAGTAGGCGAGAAAAATTGGATGCGTTGTCCCATGCCCATGTAAATCATTTGAAATTTTCAGTTAAAGATTTGTTTTATTCGTTTAATATTTTTTGTAATGATATTGTACATCATTTGTACTTCACTTAATTGGAGATAATGAATTCCGTACGAGTTTAGTTCTCTGAGCATGTTGATTTAATTATGAAGCGTTCATTATCACTCTGGACAAAATTATTAGCACAAACTTTCATATAAGAGTGATCTAGTCGAATTTCTCCGTATTATGACTAACAGCTTTTCCTGTCAACTTTGATGTTGGTTAGTTGCTTTTAACCCTTGTTTTATTGTTGCTCACATATTTATTTTCATTATCTTCACGTTATTGATCTGATTCTTAACGTCATGGTATTACAAGATCTTTCCAATTGTTCTATAAGTTGGATGGATTTCGATATGTTTGTTGATTGTTGATTGAGCTCAGTGCGAAGCTTCTACAAATTCTCTGATCTTCTAAGTACTCTCTCTGTCCGAGATCTCAACATTTTCCCAGTCGAACG]




>consensus_10288#1
AAATGTAGTAGGCGAGAAAAATTGGATGCGTTGTCCCATGCCCATGTAAATCATTTGAAA
TTTTCAGTTAAAGATTTGTTTTATTCGTTTAATATTTTTTGTAATGATATTGTACATCAT
TTGTACTTCACTTAATTGGAGATAATGAATTCCGTACGAGTTTAGTTCTCTGAGCATGTT
GATTTAATTATGAAGCGTTCATTATCACTCTGGACAAAATTATTAGCACAAACTTTCATA
TAAGAGTGATCTAGTCGAATTTCTCCGTATTATGACTAACAGCTTTTCCTGTCAACTTTG
ATGTTGGTTAGTTGCTTTTAACCCTTGTTTTATTGTTGCTCACATATTTATTTTCATTAT
CTTCACGTTATTGATCTGATTCTTAACGTCATGGTATTACAAGATCTTTCCAATTGTTCT
ATAAGTTGGATGGATTTCGATATGTTTGTTGATTGTTGATTGAGCTCAGTGCGAAGCTTC
TACAAATTCTCTGATCTTCTAAGTACTCTCTCTGTCCGAGATCTCAACATTTTCCCAGTC
GAACG

consensusID : consensus_10288#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 378
fasta sequence

                              [GGTGATGAACTGTTGTATGATGTTCATTTCTGGATTGGACGTGAAAGCACTGCAGATGAATACGGAACAGCAGCCTATAAAACGGTTGAATTGGATACTTTTCTTGACGATAAAGCGGTTCAACATCGAGAAGTTGACGGATTTGAGTCTGATTTGTTTAAAACTTACTTTAATCGCTTTGAAACTCTTGCAGGTGGATATGCAAGCGGATTTAATCATGTAAAACCGAATGAATATAGACCTCGTCTTTTAATGTTTCATTCAGTTGATCGTAAAACCATGGAATTAATTGAAGTGCCTTTTTCCAGACGTTCTTTGGATTCCACAGATGTCTTTATTTTGGATATGGGTAATCAAGCATACCAGTGGAATGGACGT]

[+] EMBL CD094023             [GGTGATGAACTGTTGTATGATGTTCATTTCTGGATTGGACGTGAAAGCACTGCAGATGAATACGGAACAGCAGCCTATAAAACGGTTGAATTGGATACTTTTCTTGACGATAAAGCGGTTCAACATCGAGAAGTTGACGGATTTGAGTCTGATTTGTTTAAAACTTACTTTAATCGCTTTGAAACTCTTGCAGGTGGATATGCAAGCGGATTTAATCATGTAAAACCGAATGAATATAGACCTCGTCTTTTAATGTTTCATTCAGTTGATCGTAAAACCATGGAATTAATTGAAGTGCCTTTTTCCAGACGTTCTTTGGATTCCACAGATGTCTTTATTTTGGATATGGGTAATCAAGCATACCAGTGGAATGGACGT]
[-] EMBL CD144170             [                                                                            ATAAAACGGTTGAATTGGATACTTTTCTNGACGATAANGCGGTTCAACATCGAGAAGTTGACGGATNTGAGTCTGATTTGTTTAANACTTACTTTAATCGCTTTGAAACTCTTGCAGGTGGATATGCAAGCGGATTTAATCATGTAAAACCGAATGAATATAGACCTCGTCTTTTAATGTTTCATTCAGTTGATCGTAAAACCATGGAATTAATTGAAGTGCCTTTTTCCAGACGTTCTTTGGATTCCACAGATGTCTTTATTTTGGATATGGGTAATCAAGCATACC              ]
[+] EMBL CD192281             [                                                                                                               AAAGCGGTTCAACATCGAGAAGTTGACGGATTTGAGTCTGATTTGTTTAAAACTTACTTTAATCGCTTTGAAACTCTTGCAGGTGGATATGCAAGCGGATTTAATCATGTAAAACCGAATGAATATAGACCTCGTCTTTTAATGTTTCATTCAGTTGATCGTAAAACCATGGAATTAATTGAAGTGCCTTTTTCCAGACGTTCTTT                                                             ]




>consensus_10288#2
GGTGATGAACTGTTGTATGATGTTCATTTCTGGATTGGACGTGAAAGCACTGCAGATGAA
TACGGAACAGCAGCCTATAAAACGGTTGAATTGGATACTTTTCTTGACGATAAAGCGGTT
CAACATCGAGAAGTTGACGGATTTGAGTCTGATTTGTTTAAAACTTACTTTAATCGCTTT
GAAACTCTTGCAGGTGGATATGCAAGCGGATTTAATCATGTAAAACCGAATGAATATAGA
CCTCGTCTTTTAATGTTTCATTCAGTTGATCGTAAAACCATGGAATTAATTGAAGTGCCT
TTTTCCAGACGTTCTTTGGATTCCACAGATGTCTTTATTTTGGATATGGGTAATCAAGCA
TACCAGTGGAATGGACGT

consensusID : consensus_10288#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 294
fasta sequence

                              [TCGTAAATCGAAAAAATTGGATAAAGGGCTTGAATAGTATTTACCCCCAGTTAGAAAAAGAAAGGGGAATCTTCATGTCAATTAAAAAAAAAGCGGAGTGAAATTTCAAATAATATTAATTTTACCAGTATTCATAATATCATTCCAAACCATTTTGAAGTTATATTTCCCCTTATAAAGTTTATTATTATAGGCATGACCATTATTTATTTAGGCTTTAATTATCTTGTTATTTATTCACCCAATTTTGGTTTGAAAATTATCTGTGTTATGGGCTTTCAAATAAAAAATTGT]

[-] EMBL CD073038             [TCGTAAATCGAAAAAATTGGATAAAGGGCTTGAATAGTATTTACCCCCAGTTAGAAAAAGAAAGGGGAATCTTCATGTCAATTAAAAAAAAAGCGGAGTGAAATTTCAAATAATATTAATTTTACCAGTATTCATAATATCATTCCAAACCATTTTGAAGTTATATTTCCCCTTATAAAGTTTATTATTATAGGCATGACCATTATTTATTTAGGCTTTAATTATCTTGTTATTTATTCACCCAATTTTGGTTTGAAAATTATCTGTGTTATGGGCTTTCAAATAAAAAATTGT]




>consensus_10288#3
TCGTAAATCGAAAAAATTGGATAAAGGGCTTGAATAGTATTTACCCCCAGTTAGAAAAAG
AAAGGGGAATCTTCATGTCAATTAAAAAAAAAGCGGAGTGAAATTTCAAATAATATTAAT
TTTACCAGTATTCATAATATCATTCCAAACCATTTTGAAGTTATATTTCCCCTTATAAAG
TTTATTATTATAGGCATGACCATTATTTATTTAGGCTTTAATTATCTTGTTATTTATTCA
CCCAATTTTGGTTTGAAAATTATCTGTGTTATGGGCTTTCAAATAAAAAATTGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10288#0      CTCGAGGGCCAGAATTCGGCACGAGGGCGGATTTAATCATGTAAAACCGAATGAATATAG 60
consensus_10288#3      ------------------------------------------------------------
consensus_10288#2      ------------------------------------------------------------
consensus_10288#1      ------------------------------------------------------------
                                                                                   

consensus_10288#0      ACCTCGTCTTTTAATGTTTCATTCAGTTGATCGTAAAACTATGGAATTAATTGAAGTGCC 120
consensus_10288#3      ------------------------------------------------------------
consensus_10288#2      ------------------------------------------------------------
consensus_10288#1      ------------------------------------------------------------
                                                                                   

consensus_10288#0      TTTTTCCAGACGTTCTTTGGATTCCACAGATGTCTTTATTTTGGATATGGGTAATCAAGC 180
consensus_10288#3      ------------------------------------------------------------
consensus_10288#2      ------------------------------------------------------------
consensus_10288#1      ------------------------------------------------------------
                                                                                   

consensus_10288#0      ATACCAGTGGAATGGACGTGGGTGCAGTAAAGAAGAAAAATTCAAGGCAAGTCAGTTTTT 240
consensus_10288#3      ------------------------------------------------------------
consensus_10288#2      ------------------------------------------------------------
consensus_10288#1      ------------------------------------------------------------
                                                                                   

consensus_10288#0      ACAACAACTCGAGTGTGATCGTAATGGAAGGTGTAAAACTGAGGTGACAGATGAAGATGG 300
consensus_10288#3      ------------------------------------------------------------
consensus_10288#2      ------------------------------------------------------------
consensus_10288#1      ------------------------------------------------------------
                                                                                   

consensus_10288#0      TTCTGAGGAACATAAAAAGTTCATTAGTTTATTGCCAGATGTTGAAATAGGAGAAAAAGT 360
consensus_10288#3      ------------------------------------------------------------
consensus_10288#2      ------------------------------------------------------------
consensus_10288#1      ------------------------------------------------------------
                                                                                   

consensus_10288#0      TCAACAAAAAATAGGCAAGAAAGTAATTTACAGAGTTTCAGATGAAAGTGGTAAAATGGA 420
consensus_10288#3      ------------------------------------------------------------
consensus_10288#2      ------------------------------------------------------------
consensus_10288#1      ------------------------------AAATGTAGTAGGCGAGAAAAATTGGATGCG 30
                                                                                   

consensus_10288#0      AATTTCACTTGTATGTGAAAATGCATTACCAAAATCGTCTCTAACAGAAGACGATGTGTA 480
consensus_10288#3      ------------------------------------------------------------
consensus_10288#2      ------------------------------------------------------------
consensus_10288#1      T-TGTCCCATGCCCATGTAAATCATTTGAAATTTTCAGTTAAAGATTTGTTTTATTCGTT 89
                                                                                   

consensus_10288#0      TCTCATTGACAGTGGACAATCTCTATTTGTTTACATTGGATTGAAATGTAGTAGGCGAGA 540
consensus_10288#3      ------------------------------------------------------------
consensus_10288#2      ------------------------------------------------------------
consensus_10288#1      TAATATTTTTTGTAATGATATTGTACATCATTTGTACTTCACTTAATTGGAGATAATGAA 149
                                                                                   

consensus_10288#0      AAAATTGGATGCGTTGTCCCATGCCCATGAAT-ACTTACAAAAAACTGATCATCCATTCG 599
consensus_10288#3      ------------------------------------------------------------
consensus_10288#2      ---------GGTGATGAACTGT-TGTATGATG-TTCATTTCTGGATTGGACGTGAAAGCA 49
consensus_10288#1      TTCCGTACGAGTTTAGTTCTCTGAGCATGTTGATTTAATTATGAAGCGTTCATTATCACT 209
                                                                                   

consensus_10288#0      CTCCAATCACTGTT-GTATCGAATAATCGTAAATCGAAAGAATTGGATAAAGTGCTTGA- 657
consensus_10288#3      --------------------------TCGTAAATCGAAAAAATTGGATAAAGGGCTTGA- 33
consensus_10288#2      CTGCAGATGAATAC-GGAACAGCAGCCTATAAAACGGTTGAATTGGATACTTTTCTTGAC 108
consensus_10288#1      CTGGACAAAATTATTAGCACAAACTTTCATATAA-GAGTGATCTAGTCGAATTTCTCCGT 268
                                                    ** *  *    *  * *        **    

consensus_10288#0      -ATAGTATCTAACAACAGTTAGAAAAAGAAAGGG--GAATCA---TCATGTCAACTAAAA 711
consensus_10288#3      -ATAGTATTTACCCCCAGTTAGAAAAAGAAAGGG--GAATCT---TCATGTCAATTAAAA 87
consensus_10288#2      GATAAAGCGGTTCAACATCGAGAAGTTGACGGATTTGAGTCTGATTTGTTTAAAACTTAC 168
consensus_10288#1      -ATTATGACTAACAGCTTTTCCTGTCAACTTTGATGTTGGTTAGTTGCTTTTAACCCTTG 327
                        **         *  *                             *  * * **      

consensus_10288#0      GAAAAGCGGAGTGAAATTTCAAATAATATTAATTCTAACAGTATTCATAATATCATTACA 771
consensus_10288#3      AAAAAGCGGAGTGAAATTTCAAATAATATTAATTTTACCAGTATTCATAATATCATTCCA 147
consensus_10288#2      TTTAATCGCTTTGAAACTCTTGCAGGTGGATATGCAAGCGGATTTAATCATGTAAAACCG 228
consensus_10288#1      TTTTATTGTTGCTCACATATTTATTTTCATTATCTTCACGTTATTGATCTGATTCTTA-A 386
                           *  *      *  *        *    **     *    ** **    *       

consensus_10288#0      ATACATTCTGAAGTTATATTTACACTTATAAAGTTTATTATTATATGCATGAACATTATT 831
consensus_10288#3      AACCATTTTGAAGTTATATTTCCCCTTATAAAGTTTATTATTATAGGCATGACCATTATT 207
consensus_10288#2      AA------TGAATATAGACCTCGTCTTTTAATGTTTCATTCAGTTGATCGTAAAACCATG 282
consensus_10288#1      CGTCATGGTATTACAAGATCTTTCCAATTGTTCTATAAGTTGGATGGATTTCGATATGTT 446
                               *      * *  *   *   *    * *                      * 

consensus_10288#0      TATTTATGCTTTAATTATCTTGTT--ATTTATTCAACCAATCTTGGTTTGAATAT-ATCT 888
consensus_10288#3      TATTTAGGCTTTAATTATCTTGTT--ATTTATTCACCCAATTTTGGTTTGAAAATTATCT 265
consensus_10288#2      GAATTAA--TTGAAGTGCCTTTTTCCAGACGTTCTTTGGATTCCACAGATGTCTTTATTT 340
consensus_10288#1      TGTTGATTGTTGATTGAGCTCAGTGCGAAGCTTCTACAAATTCT--CTGATCTTCTAAGT 504
                          * *   ** *     **   *       ***     **               *  *

consensus_10288#0      GTGTTATGTGCTTACAAATAAATAATTGTTTTTTTTCAAAAAAAAA 934
consensus_10288#3      GTGTTATGGGCTTTCAAATAAAAAATTGT----------------- 294
consensus_10288#2      TGGATATGGGTAATCAAGCATACCAGTGGAATGGACGT-------- 378
consensus_10288#1      ACTCTCTCTGTCCGAGATCTCAACATTTTCCCAGTCGAACG----- 545
                           * *  *      *    *  * *