Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10295 cluster # 10295       Sequences # 15       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10295#0 length = 826 sequences # 6  
consensus_10295#1 length = 440 sequences # 1  
consensus_10295#2 length = 343 sequences # 2  
consensus_10295#3 length = 332 sequences # 2  
consensus_10295#4 length = 280 sequences # 1  
consensus_10295#5 length = 201 sequences # 2  
consensus_10295#6 length = 180 sequences # 1  

consensusID : consensus_10295#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 826
fasta sequence
                              [ATTTAACGATGTATCATCATAACCTCAAAAAGAGTGTTATTCATCTATTCAATTGGCATCCATTGATTCATAGACTGAAATTCGGTCGATCTCTCATACATATTAAATATCATCCTCATTGTTGTATTATTCTACTATCTACCATTTCCTAACTACGATACTTTATTCGAGTCTCCGTAAATCAGAAGAAAAGATTGTGAACCAATAATTTATGTTCCATGAGTCCAACCAGAGCAACCAGAGCAACACTCTTTATAGGTACATGGAACGTCCGGACAATGTGGGAGACAGGAAAGACCAGCCAAATAGCAATGGAAATGAGGAGATACAACTTGGCAGTACTCGGAATCAGCGAAACCCATTGGACACAAACTGGACAACAAAGGCTAGGTACAGGAGAGATGCTGCTGTACTCCGGTCACGAAGGGGAAAATGCTCCACACACTCAGGGAGTTGCTCTAATGCTGTCCAAAGAAGCACGAAATGCACTTGTGGGATGGGAATCTCATGGACCCAGGATAATCAAAGCATCATTCAGAACAAAGAAGCAAGGGATCACAATGAACGTTATCCAATGTTATGCACCCACCAATGATAGCAACGACGATGATAAAGATCAGTTCTATGAAAGGCTGCAATCAATTATAGAGAAGTGCTCACGAAAGGACCTGACCATCCTGATGGGAGATCTAAATGCTAAAGTTGGAGTGGACAACACAGGATATGAAGATGTAATTGGACGACATGGACTAGGAGAGATANATGAAAATGGGGAGAGATTTGCAAATCTATGTGCATTCAACANACTGGTTATAGGCGGCACAAT]

[+] EMBL CD201435             [ATTTAACGATGTATCATCATAACCTCAAAAAGAGTGTTATTCATCTATTCAATTGGCATCCATTGATTCATAGACTGAAATTCGGTCGATCTCTCATACATATTAAATATCATCCTCATTGTTGTATTATTCTACTATCTACCATTTCCTAACTACGATACTTTATTCGAGTCTCCGTAAATCAGAAGAAAAGATTGTGAACCAATAATTTATGTTCCATGAGTCCAACCAGAGCAACCAGAGCAACACTCTTTATAGGTACATGGAACGTCCGGACAATGTGGGAGACAGGAAAGACCAGCCAAATAGCAAAGGAAATGAGGAGATACAACTTGGCAGTACTCGGAATCAGCGAAACCCATTGGACACAAACTGGACAACAAAGGCTAGGTACAGGAGAGACGCTGCTGTACTCCGGTCACGAAGGGGAAAATGCTCCACACACTCAGGGAGTTGCTCTAATTCTGTCCAAAGAAGCACGAAATGCACTTGCGGGATGGGAATCTCATGGACCCAGGATAATCAAAGCATCATTCAGAtgg                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD088431             [                                                                                                                                                                                                                                   cttctaaCAACCAAAGCAACACTCTTTATAGGTACATGGAACGTCCGGACAATGTGGGAGACAGGAAAAACCAGCCAAATAGCAATGGAAATGAGGAGATACAACTTGGCAGTACTCGGAATCAGCGAAACCCATTGGACACAAACTGGACAACAAAGGCTAGGTACAGGAGAGATGCTGGTGTACTCCGGTCACGAAGGGGAAAATGCTCCACACACTCACGGAGTTGCTTTAATTCTGTGCAAA                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD085200             [                                                                                                                                                                                                                                               AGAGCAACACTCTTTATAGGTACATGGAACGTCCGGACAATGTGGGAGACAGGAAAGACCAGCCAAATAGCAATGGAAATGAGGAGATATAACTTGGCAGTACTCGGAATCAGCGAAACCCATTGGACACAAACTGGACAACAAAGGCTAGGTACAGGAGAGATGCTGCTGTATTCCGGTCACGAAGGGGAAAATGCTCCACACACTCAGGGAGTTGCTCTAATGCTTTCCAAAGAAGCACGAAATGCACTTGTGGGATGGGAATCTCATGGACCCAGGATAATCAAAGCATCATTCAGAACAAAGAAGCAAGGGATCACAATGAACGTTATCCAATGTTATGCACCCACCAATGATAGCAACGACGATGATAAAGATCAGTTCTATGAAAGGCTGCAATCAATTATAGAGAAGTGCTCACGAAAGGACCTGACCATCCTGATGGGAGATCTAAATGCTAAAGTTGGAGTGGACAACACAGGATATGAAGATGTAATTGGACGACATGGACTAGGAGAGATAAATGAAAATGGNGAGAGATTTGCAAATCTATGTGCATTCAACANACTGGTTATAGGCGGCACAAT]
[+] EMBL CD085077             [                                                                                                                                                                                                                                               AGAGCAACACTCTTTATAGGTACATGGAACGTCCGGACAATGTGGGAGACAGGAAAGACCAGCCAAATAGCAATGGAAATGAGGAGATATAACTTGGCAGTACTCGGAATCAGCGAAACCCATTGGACACAAACTGGACAACAAAGGCTAGGTACGGGAGAGATGCTGCTGTATTCCGGTCACGAAGGGGAAAATGCTCCACACACTCAGGGAGTTGCTCTAATGCTTTCCAAAGAAGCACGAAATGCACTTGTGGGATGGGAATCTCATGGACCCAGGATAATCAAAGCATCATTCAGAACAAAGAAGCAAGGGATCACAATGAACGTTATCCAATGTTATGCACCCACCAATGATAGCAACGACGATGATAAAGATCAGTTCTATGAAAGGCTGCAATCAATTATAGAGAAGTGCTCACGAAAGGACCTGACCATCCTGATGGGAGATCTAAATGCTAAAGTTGGAGTGGACAACACAGGATATGAAGATGTAATTGGATGACACGGACTAGGAGAGATANATGAANATGGGGAGAGATTTGCAAATCTATGTGCATTCAACANACTGGT               ]
[+] EMBL CD085236             [                                                                                                                                                                                                                                               AGAGCAACACTCTTTATAGGTACATGGAACGTCCGGACAATGTGGGAGACAGGAAAGACCAGCCAAATAGCAATGGAAATGAGGAGATATAACTTGGCAGTACTCGGAATCAGCGAAACCCATTGGACACAAACTGGACAACAAAGGCTAGGTACAGGAGAGATGCTGCTGTATTCCGGTCACGAAGGGGAAAATGCTCCACACACTCAGGGAGTTGCTCTAATGCTTTCCAAAGAAGCACGAAATGCACTTGTGGGATGGGAATCTCATGGACCCAGGATAATCAAAGCATCATTCAGAACAAAGAAGCAAGGGATCACAATGAACGTTATCCAATGTTATGCACCCACCAATGATAGCAACGACGATGATAAAGATCAGTTCTATGAAAGGCTGCAATCAATTATAGAGAAGTGCTCACGAAAGGACCTGACCATCCTGATGGGAGATCTAAATGCTAAAGTTGGAGTGGACAACACAGGATATGAAGATGTAATTGGACGACATGGACTAGGAGAGATANATGANAATGGGGAGAGATTTGCANATCTATGTGCA                             ]
[+] EMBL CD153833             [                                                                                                                                                                                                                                                                                      ATGTGGGAGACAGGAGAGACCAGCCAACTAGCAATGGAAATGAGGAGATACAACTTGGCAGTACTCGGAATCAGCGAAACCCATTGTACACAAGCTGGACAACAAATTCTTGGTACAGGAGAGATGCTACTGTACTCCGGTCACGAAGGGGAAAATGCTCCACACACTCAGGGAGTTGCTCTAATGCTGTCCAAAGAAGCACGAAATGCACTTGTGGGATGGGAATCTCATGGACCCAGGATAATCAAAGCATCATTCAGAACAAGGAAGCAAGGGATCACAATGAACGTTATCCAATGTTATGCACCCACCAATGATAGCAACGACGATGATACAGATCAGCTCTATGAAAGGCTGCAATCAATTATAGA                                                                                                                                                                                 ]


>consensus_10295#0 ATTTAACGATGTATCATCATAACCTCAAAAAGAGTGTTATTCATCTATTCAATTGGCATC CATTGATTCATAGACTGAAATTCGGTCGATCTCTCATACATATTAAATATCATCCTCATT GTTGTATTATTCTACTATCTACCATTTCCTAACTACGATACTTTATTCGAGTCTCCGTAA ATCAGAAGAAAAGATTGTGAACCAATAATTTATGTTCCATGAGTCCAACCAGAGCAACCA GAGCAACACTCTTTATAGGTACATGGAACGTCCGGACAATGTGGGAGACAGGAAAGACCA GCCAAATAGCAATGGAAATGAGGAGATACAACTTGGCAGTACTCGGAATCAGCGAAACCC ATTGGACACAAACTGGACAACAAAGGCTAGGTACAGGAGAGATGCTGCTGTACTCCGGTC ACGAAGGGGAAAATGCTCCACACACTCAGGGAGTTGCTCTAATGCTGTCCAAAGAAGCAC GAAATGCACTTGTGGGATGGGAATCTCATGGACCCAGGATAATCAAAGCATCATTCAGAA CAAAGAAGCAAGGGATCACAATGAACGTTATCCAATGTTATGCACCCACCAATGATAGCA ACGACGATGATAAAGATCAGTTCTATGAAAGGCTGCAATCAATTATAGAGAAGTGCTCAC GAAAGGACCTGACCATCCTGATGGGAGATCTAAATGCTAAAGTTGGAGTGGACAACACAG GATATGAAGATGTAATTGGACGACATGGACTAGGAGAGATANATGAAAATGGGGAGAGAT TTGCAAATCTATGTGCATTCAACANACTGGTTATAGGCGGCACAAT



consensusID : consensus_10295#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 440
fasta sequence
                              [TGCTCAAGAAAGGACCGCACCATCCTGATGGGAGATCTAAATGCTAAAGTTGGAGTGGACAACACAGGATATGAAGATGTAATTGGACGACATGGATTAGGAGAGAGAGATGTAAATGGGGAGAGACTTGCAAACCTATGTGCAGTCTACAAATTGGTTATAGACGGCACAATATTCCCACACAAGCGCATACTCGAAGCTACCTTGATCTCACCCGGACCAAACACACAGAGAACCAGATAGATCACATCGGTATCAACGATAAGTTACGAAGATTCTATGGAAGATGTGGAGAACCACGGTGAGGATCTGACATACGACTATGCAGTTCTCCACCTGGTTGTGACACAAAGATTGAGTAATGGAGTCTAACAGTAACAATTGTACTATTGGACGGACAGCGATCTCAAAGATTGCTATACAGACTCATTTCGATGATC]

[-] EMBL CD068660             [TGCTCAAGAAAGGACCGCACCATCCTGATGGGAGATCTAAATGCTAAAGTTGGAGTGGACAACACAGGATATGAAGATGTAATTGGACGACATGGATTAGGAGAGAGAGATGTAAATGGGGAGAGACTTGCAAACCTATGTGCAGTCTACAAATTGGTTATAGACGGCACAATATTCCCACACAAGCGCATACTCGAAGCTACCTTGATCTCACCCGGACCAAACACACAGAGAACCAGATAGATCACATCGGTATCAACGATAAGTTACGAAGATTCTATGGAAGATGTGGAGAACCACGGTGAGGATCTGACATACGACTATGCAGTTCTCCACCTGGTTGTGACACAAAGATTGAGTAATGGAGTCTAACAGTAACAATTGTACTATTGGACGGACAGCGATCTCAAAGATTGCTATACAGACTCATTTCGATGATC]


>consensus_10295#1 TGCTCAAGAAAGGACCGCACCATCCTGATGGGAGATCTAAATGCTAAAGTTGGAGTGGAC AACACAGGATATGAAGATGTAATTGGACGACATGGATTAGGAGAGAGAGATGTAAATGGG GAGAGACTTGCAAACCTATGTGCAGTCTACAAATTGGTTATAGACGGCACAATATTCCCA CACAAGCGCATACTCGAAGCTACCTTGATCTCACCCGGACCAAACACACAGAGAACCAGA TAGATCACATCGGTATCAACGATAAGTTACGAAGATTCTATGGAAGATGTGGAGAACCAC GGTGAGGATCTGACATACGACTATGCAGTTCTCCACCTGGTTGTGACACAAAGATTGAGT AATGGAGTCTAACAGTAACAATTGTACTATTGGACGGACAGCGATCTCAAAGATTGCTAT ACAGACTCATTTCGATGATC



consensusID : consensus_10295#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 343
fasta sequence
                              [TGGAACGTTCGAACAATGTGGGAGATAGGAAAGACCACCCAAATAGCAATGGAAATGAGGAGATACAACTTGGCAGTACTCGGGATTAGCGAAACCCAATGAACACAAGCTGGAGAACGAAGGCTAAGTACGGGAGAGATGCTGCTGTACTCCGGTCACGAAGGGAAAATGCTCCACACACTCAGGGAGTTGCTCAAATGCTGTCCAGAGAAGCACGAAATGCACTTGTAGGATGGGAATCTCATAGACCCAGGATAATCAAAGCATCATTCAGAACAAAGAAGCAAGGGATCACAATGAATGTGATCCAATGTTATGCACCCACCAATGATAACGTGCCAGG]

[-] EMBL CD115781             [TGGAACGTTCGAACAATGTGGGAGATAGGAAAGACCACCCAAATAGCAATGGAAATGAGGAGATACAACTTGGCAGTACTCGGGATTAGCGAAACCCAATGAACACAAGCTGGAGAACGAAGGCTAAGTACGGGAGAGATGCTGCTGTACTCCGGTCACGAAGGGAAAATGCTCCACACACTCAGGGAGTTGCTCAAATGCTGTCCAGAGAAGCACGAAATGCACTTGTAGGATGGGAATCTCATAGACCCAGGATAATCAAAGCATCATTCAGAACAAAGAAGCAAGGGATCACAATGAATGTGATCCAATGTTATGCACCCACCAATGATAACGTGCCAGG]
[-] EMBL CD115742             [      GTTCGGACAATGTGGGAGATAGGAAAGACCAGCCAAATAGCAATGGAAATGAGGAGATACAACTTGGCAGTACTCGGGATTAGCGAAACCCAATGAACACAAGCTGGAGAACGAAGGCTAAGTACGGGAGAGATGCTGCTGTACTCCGGTCACGAAGGGAAAATGCTCCACACACTCAGGGAGTTGCTCAAATGCTGTCCAGAGAAGCGCGAAGTGCGCTTGT                                                                                                                  ]


>consensus_10295#2 TGGAACGTTCGAACAATGTGGGAGATAGGAAAGACCACCCAAATAGCAATGGAAATGAGG AGATACAACTTGGCAGTACTCGGGATTAGCGAAACCCAATGAACACAAGCTGGAGAACGA AGGCTAAGTACGGGAGAGATGCTGCTGTACTCCGGTCACGAAGGGAAAATGCTCCACACA CTCAGGGAGTTGCTCAAATGCTGTCCAGAGAAGCACGAAATGCACTTGTAGGATGGGAAT CTCATAGACCCAGGATAATCAAAGCATCATTCAGAACAAAGAAGCAAGGGATCACAATGA ATGTGATCCAATGTTATGCACCCACCAATGATAACGTGCCAGG



consensusID : consensus_10295#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 332
fasta sequence
                              [GGCAGTACTCGGAATCAGCGAAACCCATTGGACACAAGCTGGACAACAAAGGCTAGGTACGGGAAAGATGCTGCTGTATTCCAGTCACGAAGGAGAAAATGCTCCACACACTCAGGGAGTTGCTCTAATGCTGTCCAGAGAAGCACGAAATGCGCTTGTAGGATGGGAATCTCATGGATCCAGGATAATCAAAGCATCCTTCAAATCAAAGATGTGGGGGATCACAATGAATGTTATCCAATGTTATGCACCCACCAATGATAGCAACAACGACGATAAAGATCAGTTCTATGAGAGGCTTCCATCAATCATAGCTAAGTGCTCAAGAAAGG]

[-] EMBL CD129540             [GGCAGTACTCGGAATCAGCGAAACCCATTGGACACAAGCTGGACAACAAAGGCTAGGTACGGGAAAGATGCTGCTGTATTCCAGTCACGAAGGAGAAAATGCTCCACACACTCAGGGAGTTGCTCTAATGCTGTCCAGAGAAGCACGAAATGCGCTTGTAGGATGGGAATCTCATGGATCCAGGATAATCAAAGCATCCTTCAAATCAAAGATGTGGGGGATCACAATGAATGTTATCCAATGTTATGCACCCACCAATGATAGCAACAACGACGATAAAGATCAGTTCTATGAGAGGCTTCCATCAATCATAGCTAAGTGCTCAAGAAAGG]
[+] EMBL CD182958             [            AATCAGCGAAACCCATTGGACACAAGCTGGACAACAAAGGCTAGGTACGGGAAAGATGCTGCTGTATTCCAGTCACGAAGGAGAAAATGCTCCACACACTCAGGGAGTTGCTCTAATGCTGTCCAGAGAAGCACGAAATGCGCTTGTAGGATGGGAATCTCATGGATCCAGGATAATCAAAGCATCCTTCAAATCAAAGATGTGGGGGATCACAATGAATGTTATCCAATGTTATGCACCCACCAATGATAGnnc                                                                 ]


>consensus_10295#3 GGCAGTACTCGGAATCAGCGAAACCCATTGGACACAAGCTGGACAACAAAGGCTAGGTAC GGGAAAGATGCTGCTGTATTCCAGTCACGAAGGAGAAAATGCTCCACACACTCAGGGAGT TGCTCTAATGCTGTCCAGAGAAGCACGAAATGCGCTTGTAGGATGGGAATCTCATGGATC CAGGATAATCAAAGCATCCTTCAAATCAAAGATGTGGGGGATCACAATGAATGTTATCCA ATGTTATGCACCCACCAATGATAGCAACAACGACGATAAAGATCAGTTCTATGAGAGGCT TCCATCAATCATAGCTAAGTGCTCAAGAAAGG



consensusID : consensus_10295#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 280
fasta sequence
                              [AGATCAGTCAAATAGTAATGAAAATGAGGAGATACAGATTGGCAGTACTTGGAATCAGCGAAACCCATTGAACCCAAGCTGGGCAGCAAAGGCTAGATACAAGAGAGATGCTGCTGTGCTCTCGTCACGAAGAGAAAAATGCTCCACACAGTCAGGGAGTTGCTCTAATGCTGTCCAGAGAAGCACGAAATGCACTTGTAGGATGGGAATCTCATGGACCCAGGATAATCAAAGCATCATTCAGAACAAAGAAGGAAAGGATCACAATGAATGTTATCCA]

[+] EMBL CD071615             [AGATCAGTCAAATAGTAATGAAAATGAGGAGATACAGATTGGCAGTACTTGGAATCAGCGAAACCCATTGAACCCAAGCTGGGCAGCAAAGGCTAGATACAAGAGAGATGCTGCTGTGCTCTCGTCACGAAGAGAAAAATGCTCCACACAGTCAGGGAGTTGCTCTAATGCTGTCCAGAGAAGCACGAAATGCACTTGTAGGATGGGAATCTCATGGACCCAGGATAATCAAAGCATCATTCAGAACAAAGAAGGAAAGGATCACAATGAATGTTATCCA]


>consensus_10295#4 AGATCAGTCAAATAGTAATGAAAATGAGGAGATACAGATTGGCAGTACTTGGAATCAGCG AAACCCATTGAACCCAAGCTGGGCAGCAAAGGCTAGATACAAGAGAGATGCTGCTGTGCT CTCGTCACGAAGAGAAAAATGCTCCACACAGTCAGGGAGTTGCTCTAATGCTGTCCAGAG AAGCACGAAATGCACTTGTAGGATGGGAATCTCATGGACCCAGGATAATCAAAGCATCAT TCAGAACAAAGAAGGAAAGGATCACAATGAATGTTATCCA



consensusID : consensus_10295#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 201
fasta sequence
                              [GGAGACAGGAAAGACCAGTCAAATAGCAATGAAAATGGGGACATACAAAGTGGCAGTACTCGGGATAAGCGAAACCCATTGGAAACAAGCTGGACAACAAAGGCTAGGTACGGGAGAGATGCTGCTGTACTCCGGTCACGAAGGGGAAAACGCTTCATACACTCAGGGAGTTGCACTAATGCTGTCTAGAGAAGCTCGAAA]

[-] EMBL CD096754             [GGAGACAGGAAAGACCAGTCAAATAGCAATGAAAATGGGGACATACAAAGTGGCAGTACTCGGGATAAGCGAAACCCATTGGAAACAAGCTGGACAACAAAGGCTAGGTACGGGAGAGATGCTGCTGTACTCCGGTCACGAAGGGGAAAACGCTTCATACACTCAGGGAGTTGCACTAATGCTGTCTAGAGAAGCTCGAAA]
[-] EMBL CD096720             [GGAGACAGGAAAGACCAGTCAAATAGCAATGAAAATGGGGACATACAAAGTGGCAGTACTCGGGATAAGCGAAACCCATTGGAAACAAGCTGGACAACAAAGGCTAGGTACGGGAGAGATGCTGCTGTACTCCGGTCACGAAGGGGAAAACGCTTCATACACTCAGGGAGTTGCACTAATGCTGTCTAGAGAAGCTCGAAA]


>consensus_10295#5 GGAGACAGGAAAGACCAGTCAAATAGCAATGAAAATGGGGACATACAAAGTGGCAGTACT CGGGATAAGCGAAACCCATTGGAAACAAGCTGGACAACAAAGGCTAGGTACGGGAGAGAT GCTGCTGTACTCCGGTCACGAAGGGGAAAACGCTTCATACACTCAGGGAGTTGCACTAAT GCTGTCTAGAGAAGCTCGAAA



consensusID : consensus_10295#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 180
fasta sequence
                              [ATAGCTAAGTGCTTAAGAAAGGACCTGACCATCCTGATGGGAGATCTAAATGCTAAAGTCGGACTGAAAAACACAGGATATAAAGATATAATTGGACGACATGGACTAGGAGAGAGAAATGAAAATGGGGAGAGACTGCAAATCTATGTGCATTCAACAAACTGGTTATAGGTAGCACAA]

[+] EMBL CD194828             [ATAGCTAAGTGCTTAAGAAAGGACCTGACCATCCTGATGGGAGATCTAAATGCTAAAGTCGGACTGAAAAACACAGGATATAAAGATATAATTGGACGACATGGACTAGGAGAGAGAAATGAAAATGGGGAGAGACTGCAAATCTATGTGCATTCAACAAACTGGTTATAGGTAGCACAA]


>consensus_10295#6 ATAGCTAAGTGCTTAAGAAAGGACCTGACCATCCTGATGGGAGATCTAAATGCTAAAGTC GGACTGAAAAACACAGGATATAAAGATATAATTGGACGACATGGACTAGGAGAGAGAAAT GAAAATGGGGAGAGACTGCAAATCTATGTGCATTCAACAAACTGGTTATAGGTAGCACAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10295#2      ------------------------------------------------------------
consensus_10295#5      ------------------------------------------------------------
consensus_10295#4      ------------------------------------------------------------
consensus_10295#3      ------------------------------------------------------------
consensus_10295#0      ATTTAACGATGTATCATCATAACCTCAAAAAGAGTGTTATTCATCTATTCAATTGGCATC 60
consensus_10295#1      ------------------------------------------------------------
consensus_10295#6      ------------------------------------------------------------
                                                                                   

consensus_10295#2      ------------------------------------------------------------
consensus_10295#5      ------------------------------------------------------------
consensus_10295#4      ------------------------------------------------------------
consensus_10295#3      ------------------------------------------------------------
consensus_10295#0      CATTGATTCATAGACTGAAATTCGGTCGATCTCTCATACATATTAAATATCATCCTCATT 120
consensus_10295#1      ------------------------------------------------------------
consensus_10295#6      ------------------------------------------------------------
                                                                                   

consensus_10295#2      ------------------------------------------------------------
consensus_10295#5      ------------------------------------------------------------
consensus_10295#4      ------------------------------------------------------------
consensus_10295#3      ------------------------------------------------------------
consensus_10295#0      GTTGTATTATTCTACTATCTACCATTTCCTAACTACGATACTTTATTCGAGTCTCCGTAA 180
consensus_10295#1      ------------------------------------------------------------
consensus_10295#6      ------------------------------------------------------------
                                                                                   

consensus_10295#2      ------------------------------------------------------------
consensus_10295#5      ------------------------------------------------------------
consensus_10295#4      ------------------------------------------------------------
consensus_10295#3      ------------------------------------------------------------
consensus_10295#0      ATCAGAAGAAAAGATTGTGAACCAATAATTTATGTTCCATGAGTCCAACCAGAGCAACCA 240
consensus_10295#1      ------------------------------------------------------------
consensus_10295#6      ------------------------------------------------------------
                                                                                   

consensus_10295#2      -----------------------TGGAACGTTCGAACAATGTGGGAGATAGGAAAGACCA 37
consensus_10295#5      -------------------------------------------GGAGACAGGAAAGACCA 17
consensus_10295#4      ------------------------------------------------------AGATCA 6
consensus_10295#3      ------------------------------------------------------------
consensus_10295#0      GAGCAACACTCTTTATAGGTACATGGAACGTCCGGACAATGTGGGAGACAGGAAAGACCA 300
consensus_10295#1      ------------------------------------------------------TGCTCA 6
consensus_10295#6      ---------------------------------------------ATAGCTAAGTGCTTA 15
                                                                                   

consensus_10295#2      CCCAAATAGCA-ATGGAAATGAGGAGATACAACTTGGCAGTACTCGGGATTAGCGAAACC 96
consensus_10295#5      GTCAAATAGCA-ATGAAAATGGGGACATACAAAGTGGCAGTACTCGGGATAAGCGAAACC 76
consensus_10295#4      GTCAAATAGTA-ATGAAAATGAGGAGATACAGATTGGCAGTACTTGGAATCAGCGAAACC 65
consensus_10295#3      -----------------------------------GGCAGTACTCGGAATCAGCGAAACC 25
consensus_10295#0      GCCAAATAGCA-ATGGAAATGAGGAGATACAACTTGGCAGTACTCGGAATCAGCGAAACC 359
consensus_10295#1      AGAAAGGACCGCACCATCCTGATGGGAGATCTAAATGCTAAAGTTGGAGTGGACAACACA 66
consensus_10295#6      AGAAAGGACCTGACCATCCTGATGGGAGATCTAAATGCTAAAGTCGGACTGAAAAACACA 75
                                                           **   * * **  *     * ** 

consensus_10295#2      CAATGAACACA---AGCTGGAGAACGAAGGCTAAGTACGGGAGAGATGCTGCTGTACTCC 153
consensus_10295#5      CATTGGAAACA---AGCTGGACAACAAAGGCTAGGTACGGGAGAGATGCTGCTGTACTCC 133
consensus_10295#4      CATTGAACCCA---AGCTGGGCAGCAAAGGCTAGATACAAGAGAGATGCTGCTGTGCTCT 122
consensus_10295#3      CATTGGACACA---AGCTGGACAACAAAGGCTAGGTACGGGAAAGATGCTGCTGTATTCC 82
consensus_10295#0      CATTGGACACA---AACTGGACAACAAAGGCTAGGTACAGGAGAGATGCTGCTGTACTCC 416
consensus_10295#1      GGATATGAAGATGTAATTGGACGACATGGATTAGGA--GAGAGAGATGTAAATG------ 118
consensus_10295#6      GGATATAAAGATATAATTGGACGACATGGACTAGGA--GAGAGAAATGAAAATG------ 127
                          *      *   *  ***    *   *  **       ** * ***    **      

consensus_10295#2      GGTCACGAAGGG-AAAATGCTCCACACACTCAGGGAGTTGCTCAAATGCTGTCCAGAGAA 212
consensus_10295#5      GGTCACGAAGGGGAAAACGCTTCATACACTCAGGGAGTTGCACTAATGCTGTCTAGAGAA 193
consensus_10295#4      CGTCACGAAGAGAAAAATGCTCCACACAGTCAGGGAGTTGCTCTAATGCTGTCCAGAGAA 182
consensus_10295#3      AGTCACGAAGGAGAAAATGCTCCACACACTCAGGGAGTTGCTCTAATGCTGTCCAGAGAA 142
consensus_10295#0      GGTCACGAAGGGGAAAATGCTCCACACACTCAGGGAGTTGCTCTAATGCTGTCCAAAGAA 476
consensus_10295#1      -GGGAGAGACTTGCAAAC-CTATGTGCAGTCTACAAATTGGTTATAGACGGCACAATATT 176
consensus_10295#6      -GGGAGAGACT-GCAAAT-CTATGTGCATTCAACAAACTGGTTATAGGTAGCACAA---- 180
                        *  *   *     ***  **     ** **    *  **     *    *   *     

consensus_10295#2      GCACGAAATGCACTTGTAGGATGGGAATCTCATAGACCCAGGATAATCAAAGCATCATTC 272
consensus_10295#5      GCTCGAAA---------------------------------------------------- 201
consensus_10295#4      GCACGAAATGCACTTGTAGGATGGGAATCTCATGGACCCAGGATAATCAAAGCATCATTC 242
consensus_10295#3      GCACGAAATGCGCTTGTAGGATGGGAATCTCATGGATCCAGGATAATCAAAGCATCCTTC 202
consensus_10295#0      GCACGAAATGCACTTGTGGGATGGGAATCTCATGGACCCAGGATAATCAAAGCATCATTC 536
consensus_10295#1      CCCACACAAGCGCATACTCGAAGCTACCTTGATCTCACCCGGACCA--AACACACAGAGA 234
consensus_10295#6      ------------------------------------------------------------
                                                                                   

consensus_10295#2      AGAACAAAGAAGCAAGGGATCACAATGAATGTGATCCAATGTTATGCACCCACCAATGAT 332
consensus_10295#5      ------------------------------------------------------------
consensus_10295#4      AGAACAAAGAAGGAAAGGATCACAATGAATGTTATCCA---------------------- 280
consensus_10295#3      AAATCAAAGATGTGGGGGATCACAATGAATGTTATCCAATGTTATGCACCCACCAATGAT 262
consensus_10295#0      AGAACAAAGAAGCAAGGGATCACAATGAACGTTATCCAATGTTATGCACCCACCAATGAT 596
consensus_10295#1      ACCAGATAGATCACATCGGTATCAACGATAAGTTACGAAGATTCTATGGAAGATGTGGAG 294
consensus_10295#6      ------------------------------------------------------------
                                                                                   

consensus_10295#2      AACGTGCCAGG------------------------------------------------- 343
consensus_10295#5      ------------------------------------------------------------
consensus_10295#4      ------------------------------------------------------------
consensus_10295#3      AGCAACAACGACGATAAAGATCAGTTCTATGAGAGGCTTCCATCAATCATAGCTAAGTGC 322
consensus_10295#0      AGCAACGACGATGATAAAGATCAGTTCTATGAAAGGCTGCAATCAATTATAGAGAAGTGC 656
consensus_10295#1      AACCACGGTGAGGATCTGACATACGACTATGCAGTTCTCCACCTGGTTGTGACACAAAGA 354
consensus_10295#6      ------------------------------------------------------------
                                                                                   

consensus_10295#2      ------------------------------------------------------------
consensus_10295#5      ------------------------------------------------------------
consensus_10295#4      ------------------------------------------------------------
consensus_10295#3      TCAAGAAAGG-------------------------------------------------- 332
consensus_10295#0      TCACGAAAGGACCTGACCATCCTGATGGGAGATCTAAATGCTAAAGTTGGAGTGGACAAC 716
consensus_10295#1      TTGAGTAATGGAGTCTAACAGTAACAATTGTACTATTGGACGGACAGCGATCTCAAAGAT 414
consensus_10295#6      ------------------------------------------------------------
                                                                                   

consensus_10295#2      ------------------------------------------------------------
consensus_10295#5      ------------------------------------------------------------
consensus_10295#4      ------------------------------------------------------------
consensus_10295#3      ------------------------------------------------------------
consensus_10295#0      ACAGGATATGAAGATGTAATTGGACGACATGGACTAGGAGAGATANATGAAAATGGGGAG 776
consensus_10295#1      TGCTATACAGACTCATTTCGATGATC---------------------------------- 440
consensus_10295#6      ------------------------------------------------------------
                                                                                   

consensus_10295#2      --------------------------------------------------
consensus_10295#5      --------------------------------------------------
consensus_10295#4      --------------------------------------------------
consensus_10295#3      --------------------------------------------------
consensus_10295#0      AGATTTGCAAATCTATGTGCATTCAACANACTGGTTATAGGCGGCACAAT 826
consensus_10295#1      --------------------------------------------------
consensus_10295#6      --------------------------------------------------
                                                                         




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)