cluster # 10298

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Schistosoma mansoni
cluster # 10298 cluster # 10298 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10298#0 length = 1134 sequences # 10
consensus_10298#1 length = 585 sequences # 1

consensus_10298#2 length = 510 sequences # 2
consensus_10298#3 length = 222 sequences # 1
consensus_10298#4 length = 203 sequences # 1

consensusID : consensus_10298#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1134
fasta sequence

                              [GGCACGAGGTACCTTCTTATGGCTTATGGTATCTTAACACTTCTGGTCATCTACTTAAACATCTACTTAAGCTTAGTCACAACTTCTGCTCCGTAAGAATTGTCAAATGCTGGAATTCGCTGCAGACTGAGCTAGTTCAAGCAACTTCCCAGGAGTCCTTTCAGAGGAAACTTGACCTATTCTTAAGGACTAAGGATAACATCTTATTATGATTTACCAATTTCTTTTTTACCTATTATTGTTAATATACCTAGGTTCCTGTCTGGAGGTACTGGTGATCCACTGCTACTAGACACGGAAGCCCGTTAAGCGAAAGCTTCTATTCCGCCCACAACCATTTGAACCATTTGAACTGGAACGATGCGGGGGGTTCGATTTTTCAAGGTGGTTGCGCAAATATGTATACCATTCTCCGGAATGCTGCTTTGCTCTCTTCAAAATATTCTGGACTTCAACCTGTTCGTTCGCTAATACACACTTTGATAAAACAGCATCGTTTGTATGCGGTTTTTCCCGGGAAAACCATTCCCTCACCACTT-GTTTCCACAGTAGTTTCTAGAAACGCAAGTCATGG-AAGAACAATTCCTAAGAGAGTTTCAGATTACATGTCACGCG-TATTTTTCGACAATGTGCACTTCTATATTATGTTGGGTCTTG-TTCCTTCATTTCTACTAGTTTTTTTTGTCAACTCATTTATTGGGCCAGCAGAATTGACGGACATACCAGAGGACTATGAGCCACGTTACTGGGAATACCACAAACACCCTATTACGCGCTTCATTGCGAAGTACATGTGCGAACATCCTCAGAAGTTGTATGAATCTACTTTAGCGGAATTAGATGAGTTTCGATTTACTAAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCAACTTGAAAAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATCCAACTGGCGTGAATAGCTCATTTGAAAGACTCACAAAAGATCAAGAGGCTGGTCAACTAGTTAGTCGTTGATTATAAAACTCATTTGAGAATAATACTTTGTATTATCTTTCATCTAAGTGCAGTTTATTTTAATCCTAAATCAAATGTTATGAAAAACTTCTGTTATTCATTCATTAATAAAAAATTT]

[+] EMBL CD083426             [GGCACGAGGTACCTTCTTATGGCTTATGGTATCTTAACACTTCTGGTCATCTACTTAAACATCTACTTAAGCTTAGTCACAACTTCTGCTCCGTAAGAATTGTCAAATGCTGGAATTCGCTGCAGACTGAGCTAGTTCAAGCAACTTCCCAGGAGTCCTTTCAGAGGAAACTTGACCTATTCTTAAGGACTAAGGATAACATCTTATTATGATTTACCAATTTCTTTTTTACCTATTATTGTTAATATACCTAGGTTCCTGTCTGGAGGTACTGGTGATCCACTGCTACTAGACACGGAAGCCCGTTAAGCGAAAGCTTCTATTCCGCCCACAACCATTTGAACCATTTGAACTGGAACGATGCGGGGGGTTCGATTTTTCAAGGTGGTTGCGCAAATATGTATACCATTCTCCGGAATGCTGCTTTGCTCTCTTCAAAATATTCTGGACTTCAACCTGTTCGTTCGCTAATACACACTTTGATAAAACAGCATCGTTTGTATGCGG TTTTCCCGGGAAAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD078560             [                                                                                                                                                                                                                                                                                                                                                                                                        GCAAATATGTATACCATTCTCCGGAATGCTGCTTTGCTCTCTTCAAAATATTCTGGACTTCAACCTGTTCGTTCGCTAATACACACTTTGATAAAACAGCATCGTTTGTATGCGGTTTTTCCCGGGAAAACCATTCCCTCACCACTT GTTTCCACAGTAGTTTCTAGAAACGCAAGTCATGG AAGAACAATTCCTAAGAGAGTTTCAGATTACATGTCACGCG TATTTTTCGACAATGTGCACTTCTATATTATGTTGGGTCTTG TTCCTTCATTTCTACTAGTTTTTTTTGTCAACTCATTTATTGGGCCAGCAGAATTGACGGACATACCAGAGGACTATGAGCCACGTTACTGGGAATACCACAAACACCCTATTACGCGCTTCATTGCGAAGTACATGTGCGAACATCCTCAGAAGTTGTATGAATCTACTTTAGCGGAATTAGATGAGTTTCGATTTACTAAGGAGCTGGTTGATGAAGAAAGATGG                                                                                                                                                                                                                                                          ]
[+] EMBL AA559649             [                                                                                                                                                                                                                                                                                                                                                                                                                GTATACCATTCTCCGGAATGCTGCTTTGCTCTCTTCAAAATATTCTGGACTTCAACCTGTTCGTTCGCTAATACACACTTTGATAAAACAGCATCGTTTGTATGCGGTTTTTCCCGGGAAAACCATTCCCTCACCACTT GTTTCCACAGTAGTTTCTAGAAACGCAAGTCATGGAAANAACAATTCCTAAGAGAGTTTCAGATTACATGTCACGCGTTATTTTTCGACAATGTGCACTTCTATATTATGTNGGGTCTTGTTTCCTTCATTTCTACTAGTTTTTTTTGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD079458             [                                                                                                                                                                                                                                                                                                                                                                                                                   gaggATTCTCCGGAATGCTGCTTTGCTCTCTTC AAATATTCTGGACTTC ACCTGTTCGTTCGCTAATACACACTTTGATAAAACAGCATCGTTTGTATGCGGTTTTTCCCGGGAAAACCATTCCCTCACCACTT GTTTCCACAGTAGTTTCTAGAAACGCAAGTCATGG AAGAACAATTCCTAAGAGAGTTTCAGATTACATGTCACGCG TATTTTTCGACAATGTGCACTTCTATATTATGTTGGGTCTTG TTCCTTCATTTCTACTAGTTTTTTTTGTCAACTCATTTATTGGGCCAGCAGAATTGACGGACATACCAGAGGACTATGAGCCACGTTACTGGGAATACCACAAACACCCTATTACGCGCTTCATTGCGAAGTACATGTGCGAACATCCTCAGAAGTTGTATGAATCTACTTTAGCGGAATTAGATGAGTTTCGATTTACTAAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCAACTTGAAAAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATCCAACTGGCGTGAATAGCTCATTTGAAAGACTCACAAAAGATCAAGAGGCTGGTCAACTAGTTAGTCGTTGATTATAAAACTCATTTGAGAATAATACTTTGTATTATCTTTCATCTAAGTGCAGTTTATTNTAATCCTANATCANATGTTATGAAAAACTTCTGGTATTCATTCATTAATAna      ]
[+] EMBL SM913                [                                                                                                                                                                                                                                                                                                                                                                                                                       ATNCTCCGGAATGNTGNTTTGNTCTCTNCAAAATATTCTGGACTTCAACCTGTTCGTTCGNTAATACACANTTGGATAAAACAGNATCGNTTGTATGCGGTTTTTCCCGGGAAAACCATTCCCTCACCACTTGGTTTCCACAGTAGTTTCTAGAAACGCAAGTCATGG AAGAACAATTCCTAAGAGAGTTTCAGATTACATGTCACGCG TATTTTTCGACAATGTGCACTTCTATATTATGTTGGGTCTTG TTCCTTCATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD083610             [                                                                                                                                                                                                                                                                                                                                                                                                                            gCGGAATGCTGCTTTGCTCTCTTCAAAATATTCTGGACTTCAACCTGTTCGTTCGCTAATACACACTTTGATAAAACAGCATCGTTTGTATGCGGTTTTTCCCGGGAAAACCATTCCCTCACCACTT GTTTCCACAGTAGTTTCTAGAAACGCAAGTCATGG AAGAACAATTCCTAAGAGAGTTTCAGATTACATGTCACGCG TATTTTTCGACAATGTGCACTTCTATATTATGTTGGGTCTTG TTCCTTCATTTCTACTAGTTTTTTTTGTCAACTCATTTATTGGGCCAGCAGAATTGACGGACATACCAGAGGACTATGAGCCACGTTACTGGGAATACCACAAACACCCTATTACGCGCTTCATTGCGAAGTACATGTGCGAACATCCTCAGAAGTTGTATGAATCTACTTTAGCGGAATTAGATGAGTTTCGATTTACTAAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCAACTTGAAAAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATC                                                                                                                                                                                             ]
[-] EMBL CD073729             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCGGGAAAACCATTCCCTCACCACTT GTTTCCACAGTAGTTTCTAGAAACGCAAGTCATGG AAGAACAATTCCTAAGAGAGTTTCAGATTACATGTCACGCG TATTTTTCGACAATGTGCACTTCTATATTATGTTGGGTCTTG TTCCTTCATTTCTACTAGTTTTTTTTGTCAACTCATTTATTGGGCCAGCAGAATTGACGGACATACCAGAGGACTATGAGCCACGTTACTGGGAATACCACAAACACCCTATTACGCGCTTCATTGCGAAGTACATGTGCGAACATCCTCAGAAGTTGTATGAATCTACTTTAGCGGAATTAGATGAGTTTCGATTTACTAAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCAACTTGAAAAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATCCAACTGGCGTGAATAGCTCATTTGAAAGACTCACAAAAGATCAAGAGGCTGGTCAACTAGTTAGTCGTTGATTATAAAACTCATTTGAGAATAATACTTTGTATTATCTTTCATCTAAGTGCAGTTTATTTTAATCCTAAATCAAATGTT GGAAAAACTTCTGTTAAACATTCATTAATAAAAA    ]
[-] EMBL CD074544             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATTCCCTCACCACTG TTTTCCACAGTAGTTTCTAGAAACGCAAGTCATGG AAGAACAATTCCTAAGAGAGTTTCAGATTACATGTCACGCG TATTTTTCGACAATGTGCACTTCTATATTATGTTGGGTCTTG TTCCTTCATTTCTACTAGTTTTTTTTGTCAACTCATTTATTGGGCCAGCAGAATTGACGGACATACCAGAGGACTATGAGCCACGTTACTGGGAATACCACAAACACCCTATTACGCGCTTCATTGCGAAGTACATGTGCGAACATCCTCAGAAGTTGTATGAATCTACTTTAGCGGAATTAGATGAGTTTCGATTTACTAAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCAACTTGAAAAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATCCAACTGGCGTGAATAGCTCATTTGAAAGACTCACAAAAGATCAAGAGGCTGGTCAACTAGTTAGTCGTTGATTATAAAACTCATTTGAGAATAATACTTTGTATTATCTTTCATCTAAGTGCAGTTTATTTTAATCCTAAATCAAATGTTATGGAAAACTTCTGTTATTCAATCATTAATAAAAAATTT]
[-] EMBL CD134635             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGTCACGCG TATTTTTCGACAATGGGCACTTCTATATTATGTTGGGTCTTG TTCCTTCATTTCTACTAGTTTTTTTTGTCAACTCATTTATTGGGCCAGCAGAATTGACGGACATACCAGAGGACTATGAGCCACGTTACTGGGAATACCACAAACACCCTATTACGCGCTTCATTGCGAAGTACATGTGCGAACATCCTCAGAAGTTGTATGAATCTACTTTAGCGGAATTAGATGAGTTT                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD073027             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCGTG TTCCTTCATTTCAACTAGTTTTTTTTGTCAACTCATTTATTGGGCCAGCAGAATTGACGGACATACCAGAGGACTATGAGCCACGTTACTGGGAATACCACAAACACCCTATTACGCGCTTCATTGCGAAGTACATGTGCGAACATCCTCAGAAGTTGTATGAATCTACTTTAGCGGAATTAGATGAGTTTCGATTTACTAAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCAACTTGAAAAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATCCAACTGGCGTGAATAGCTCATTTGAAAGACTCACAAAAGATCAAGAGGCTGGTCAACTAGTTAGTCGTTGATTATAAAACTCATTTGAGAATAATACTTTGTATTATCTTTCATCTAAGTGCAGTTTATTTTAATCCTAAATCAAATGTTATGAAAAACTTCTGTTATTCATTCATTAATAAAAA    ]




>consensus_10298#0
GGCACGAGGTACCTTCTTATGGCTTATGGTATCTTAACACTTCTGGTCATCTACTTAAAC
ATCTACTTAAGCTTAGTCACAACTTCTGCTCCGTAAGAATTGTCAAATGCTGGAATTCGC
TGCAGACTGAGCTAGTTCAAGCAACTTCCCAGGAGTCCTTTCAGAGGAAACTTGACCTAT
TCTTAAGGACTAAGGATAACATCTTATTATGATTTACCAATTTCTTTTTTACCTATTATT
GTTAATATACCTAGGTTCCTGTCTGGAGGTACTGGTGATCCACTGCTACTAGACACGGAA
GCCCGTTAAGCGAAAGCTTCTATTCCGCCCACAACCATTTGAACCATTTGAACTGGAACG
ATGCGGGGGGTTCGATTTTTCAAGGTGGTTGCGCAAATATGTATACCATTCTCCGGAATG
CTGCTTTGCTCTCTTCAAAATATTCTGGACTTCAACCTGTTCGTTCGCTAATACACACTT
TGATAAAACAGCATCGTTTGTATGCGGTTTTTCCCGGGAAAACCATTCCCTCACCACTTG
TTTCCACAGTAGTTTCTAGAAACGCAAGTCATGGAAGAACAATTCCTAAGAGAGTTTCAG
ATTACATGTCACGCGTATTTTTCGACAATGTGCACTTCTATATTATGTTGGGTCTTGTTC
CTTCATTTCTACTAGTTTTTTTTGTCAACTCATTTATTGGGCCAGCAGAATTGACGGACA
TACCAGAGGACTATGAGCCACGTTACTGGGAATACCACAAACACCCTATTACGCGCTTCA
TTGCGAAGTACATGTGCGAACATCCTCAGAAGTTGTATGAATCTACTTTAGCGGAATTAG
ATGAGTTTCGATTTACTAAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCAAC
TTGAAAAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATCCAACTGGCGTGAATA
GCTCATTTGAAAGACTCACAAAAGATCAAGAGGCTGGTCAACTAGTTAGTCGTTGATTAT
AAAACTCATTTGAGAATAATACTTTGTATTATCTTTCATCTAAGTGCAGTTTATTTTAAT
CCTAAATCAAATGTTATGAAAAACTTCTGTTATTCATTCATTAATAAAAAATTT

consensusID : consensus_10298#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 585
fasta sequence

                              [TTGAGCCATGTCATTCAAGGTCTCTAACCATCGATTGCTACCATCTTGCGAATCCCAACCAGGTGGTCTACATCTACCAACATGGCTCAGTCCAATTGTCAGTGACTTCATGGATTTGTGCCACGTTTTGGTCTGTCCACCCTTAGTTTTCTTCCAACCTACTTCTACACCATAAAACATCGCACGTCGGGGGAGTCAGTTGTTGGGCATACGTAACACGTGTCCGCGCCATCTCAACTGATGAAGTTTCACTACTTCATCAATCGATTTGCCATTCTTATATAGTACCCGTTTTTTAACAACTTCATTATTCAGTCGGTGGTCTCAGGATATACGAACAATGCTTCGAAGACACCTATAATCGAATACTAGTAACCTACGAATATCCTCTACTCTTACCGGNTATCTTTTCAGATCCGATCGTATAACTAGGATTTCACTTATTGTCTTCAACATCTTTATATCTCGTGCTTTTTAATTGAAGAAGTTATGGNGCGGTGACTGAATGGTTAAAATGTACGTTTTCAACCGATAGGTCGCAAGTCTATACAATGTTCCACTTAGTTTGATAGAATCACTGAGTCT]

[+] EMBL CD152996             [TTGAGCCATGTCATTCAAGGTCTCTAACCATCGATTGCTACCATCTTGCGAATCCCAACCAGGTGGTCTACATCTACCAACATGGCTCAGTCCAATTGTCAGTGACTTCATGGATTTGTGCCACGTTTTGGTCTGTCCACCCTTAGTTTTCTTCCAACCTACTTCTACACCATAAAACATCGCACGTCGGGGGAGTCAGTTGTTGGGCATACGTAACACGTGTCCGCGCCATCTCAACTGATGAAGTTTCACTACTTCATCAATCGATTTGCCATTCTTATATAGTACCCGTTTTTTAACAACTTCATTATTCAGTCGGTGGTCTCAGGATATACGAACAATGCTTCGAAGACACCTATAATCGAATACTAGTAACCTACGAATATCCTCTACTCTTACCGGNTATCTTTTCAGATCCGATCGTATAACTAGGATTTCACTTATTGTCTTCAACATCTTTATATCTCGTGCTTTTTAATTGAAGAAGTTATGGNGCGGTGACTGAATGGTTAAAATGTACGTTTTCAACCGATAGGTCGCAAGTCTATACAATGTTCCACTTAGTTTGATAGAATCACTGAGTCT]




>consensus_10298#1
TTGAGCCATGTCATTCAAGGTCTCTAACCATCGATTGCTACCATCTTGCGAATCCCAACC
AGGTGGTCTACATCTACCAACATGGCTCAGTCCAATTGTCAGTGACTTCATGGATTTGTG
CCACGTTTTGGTCTGTCCACCCTTAGTTTTCTTCCAACCTACTTCTACACCATAAAACAT
CGCACGTCGGGGGAGTCAGTTGTTGGGCATACGTAACACGTGTCCGCGCCATCTCAACTG
ATGAAGTTTCACTACTTCATCAATCGATTTGCCATTCTTATATAGTACCCGTTTTTTAAC
AACTTCATTATTCAGTCGGTGGTCTCAGGATATACGAACAATGCTTCGAAGACACCTATA
ATCGAATACTAGTAACCTACGAATATCCTCTACTCTTACCGGNTATCTTTTCAGATCCGA
TCGTATAACTAGGATTTCACTTATTGTCTTCAACATCTTTATATCTCGTGCTTTTTAATT
GAAGAAGTTATGGNGCGGTGACTGAATGGTTAAAATGTACGTTTTCAACCGATAGGTCGC
AAGTCTATACAATGTTCCACTTAGTTTGATAGAATCACTGAGTCT

consensusID : consensus_10298#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 510
fasta sequence

                              [AGTCGGCACGAGAAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCAACTTGAAAAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATCCAACTGGCGTGAATAGCTCATTTGAAAGACTCACAAAAGATCAAGAGGCTGGTCAACTAGTTAGTCGTTGATTATAAAACTCATTTGAGAATAATACTTTGTATTATCTTTCATCTAAGTGCAGTTTATTTTAATCCTAAATCANATGTTATGAAAAACTTCTGTTATTCNNTCATTANTAAAACNNTTTANCNGTATTTACAACCCNCAANAAANNANNAACTCGAGGGGGGGGCCCGGTNCCCANNTTCGCCCCTNTANGGGAGTCCGAATTACANCTTCACCTGGGCCGTCCGGTTTTACANCGNCCGTGGNCTGGGGGAAAANCCCTGGGNGGTTACCCCAANCTTTAAACNCGCCTTTGGGANGGAANAACCCCCCTTTTTNGGCNAGTTGGGGGNAAANNGGGG]

[+] EMBL SM070                [AGTCGGCACGAGAAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCAACTTGAAAAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATCCAACTGGCGTGAATAGCTCATTTGAAAGACTCACAAAAGATCAAGAGGCTGGTCAACTAGTTAGTCGTTGATTATAAAACTCATTTGAGAATAATACTTTGTATTATCTTTCATCTAAGTGCAGTTTATTTTAATCCTAAATCANATGTTATGAAAAACTTCTGTTATTCNNTCATTANTAAAACNNTTTANCNGTATTTACAACCCNCAANAAANNANNAACTCGAGGGGGGGGCCCGGTNCCCANNTTCGCCCCTNTANGGGAGTCCGAATTACANCTTCACCTGGGCCGTCCGGTTTTACANCGNCCGTGGNCTGGGGGAAAANCCCTGGGNGGTTACCCCAANCTTTAAACNCGCCTTTGGGANGGAANAACCCCCCTTTTTNGGCNAGTTGGGGGNAAANNGGGG]
[+] EMBL SM7261               [            AAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCAACTTGAAAAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATCCAACTGGCGTGAATAGCTCATTTGAAAGACTCACAAAAGATCAAGAGGCTGGTCAACTAGTTAGTCGTTGATTATAAAACTCATTTGAGAATAATACTTTGTATTATCTTTCATCTAAGTGCAGTTTATTTTAATCCTAAATCANATGTTATGAAAAAC                                                                                                                                                                                                                                                           ]




>consensus_10298#2
AGTCGGCACGAGAAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCAACTTGAA
AAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATCCAACTGGCGTGAATAGCTCA
TTTGAAAGACTCACAAAAGATCAAGAGGCTGGTCAACTAGTTAGTCGTTGATTATAAAAC
TCATTTGAGAATAATACTTTGTATTATCTTTCATCTAAGTGCAGTTTATTTTAATCCTAA
ATCANATGTTATGAAAAACTTCTGTTATTCNNTCATTANTAAAACNNTTTANCNGTATTT
ACAACCCNCAANAAANNANNAACTCGAGGGGGGGGCCCGGTNCCCANNTTCGCCCCTNTA
NGGGAGTCCGAATTACANCTTCACCTGGGCCGTCCGGTTTTACANCGNCCGTGGNCTGGG
GGAAAANCCCTGGGNGGTTACCCCAANCTTTAAACNCGCCTTTGGGANGGAANAACCCCC
CTTTTTNGGCNAGTTGGGGGNAAANNGGGG

consensusID : consensus_10298#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 222
fasta sequence

                              [TGTCTGTCTGGTATATAAACCGAGTATCCTTGAAATAAATGATTCGCAAAGCTGAAGCTGTAATTGGTGTTTTGGACACAATTGGAAGGGCTAGGCGGACAAGGGACCGATAAGGACGCTAGACTGCTCATACCAGTTGAACGTCATTGATTTGGTACAGCGTTAAGATCGGAAAAGTCGTATTTCGATTGGTGGATAATTCATGTGATAAAAAGCCAGACA]

[+] EMBL CD143444             [TGTCTGTCTGGTATATAAACCGAGTATCCTTGAAATAAATGATTCGCAAAGCTGAAGCTGTAATTGGTGTTTTGGACACAATTGGAAGGGCTAGGCGGACAAGGGACCGATAAGGACGCTAGACTGCTCATACCAGTTGAACGTCATTGATTTGGTACAGCGTTAAGATCGGAAAAGTCGTATTTCGATTGGTGGATAATTCATGTGATAAAAAGCCAGACA]




>consensus_10298#3
TGTCTGTCTGGTATATAAACCGAGTATCCTTGAAATAAATGATTCGCAAAGCTGAAGCTG
TAATTGGTGTTTTGGACACAATTGGAAGGGCTAGGCGGACAAGGGACCGATAAGGACGCT
AGACTGCTCATACCAGTTGAACGTCATTGATTTGGTACAGCGTTAAGATCGGAAAAGTCG
TATTTCGATTGGTGGATAATTCATGTGATAAAAAGCCAGACA

consensusID : consensus_10298#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 203
fasta sequence

                              [GTGATTAACGTTTTAATTTCATTTTTCTAATAGAGTATAATGTTATGAATTTAAAAAGAAGGGTCTCTGATTTGTTGTAATTTTATGTCCGGCTTTTTATCACGTGGATTATCCACCAGTGGAGATACGACTTTTCCGATCTTAACACTGTACCAAATCAATGACGTCCAACTGGTATGAGCAGTCTAGCGTCCTTATTGGTC]

[+] EMBL CD202603             [GTGATTAACGTTTTAATTTCATTTTTCTAATAGAGTATAATGTTATGAATTTAAAAAGAAGGGTCTCTGATTTGTTGTAATTTTATGTCCGGCTTTTTATCACGTGGATTATCCACCAGTGGAGATACGACTTTTCCGATCTTAACACTGTACCAAATCAATGACGTCCAACTGGTATGAGCAGTCTAGCGTCCTTATTGGTC]




>consensus_10298#4
GTGATTAACGTTTTAATTTCATTTTTCTAATAGAGTATAATGTTATGAATTTAAAAAGAA
GGGTCTCTGATTTGTTGTAATTTTATGTCCGGCTTTTTATCACGTGGATTATCCACCAGT
GGAGATACGACTTTTCCGATCTTAACACTGTACCAAATCAATGACGTCCAACTGGTATGA
GCAGTCTAGCGTCCTTATTGGTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10298#0      GGCACGAGGTACCTTCTTATGGCTTATGGTATCTTAACACTTCTGGTCATCTACTTAAAC 60
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      ------------------------------------------------------------
                                                                                   

consensus_10298#0      ATCTACTTAAGCTTAGTCACAACTTCTGCTCCGTAAGAATTGTCAAATGCTGGAATTCGC 120
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      ------------------------------------------------------------
                                                                                   

consensus_10298#0      TGCAGACTGAGCTAGTTCAAGCAACTTCCCAGGAGTCCTTTCAGAGGAAACTTGACCTAT 180
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      ------------------------------------------------------------
                                                                                   

consensus_10298#0      TCTTAAGGACTAAGGATAACATCTTATTATGATTTACCAATTTCTTTTTTACCTATTATT 240
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      ------------------------------------------------------------
                                                                                   

consensus_10298#0      GTTAATATACCTAGGTTCCTGTCTGGAGGTACTGGTGATCCACTGCTACTAGACACGGAA 300
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      ------------------------------------------------------------
                                                                                   

consensus_10298#0      GCCCGTTAAGCGAAAGCTTCTATTCCGCCCACAACCATTTGAACCATTTGAACTGGAACG 360
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      ------------------------------------------------------------
                                                                                   

consensus_10298#0      ATGCGGGGGGTTCGATTTTTCAAGGTGGTTGCGCAAATATGTATACCATTCTCCGGAATG 420
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      ------------------------------------------------------------
                                                                                   

consensus_10298#0      CTGCTTTGCTCTCTTCAAAATATTCTGGACTTCAACCTGTTCGTTCGCTAATACACACTT 480
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      ------------------------------------------------------------
                                                                                   

consensus_10298#0      TGATAAAACAGCATCGTTTGTATGCGGTTTTTCCCGGGAAAACCATTCCCTCACCACTTG 540
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      ------------------------------------------------------------
                                                                                   

consensus_10298#0      TTTCCACAGTAGTTTCTAGAAACGCAAGTCATGGAAGAACAATTCCTAAGAGAGTTTCAG 600
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      ------------------------------------------------------------
                                                                                   

consensus_10298#0      ATTACATGTCACGCGTATTTTTCGACAATGTGCACTTCTATATTATGTTGGGTCTTGTTC 660
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      ------------------------------------------------------------
                                                                                   

consensus_10298#0      CTTCATTTCTACTAGTTTTTTTTGTCAACTCATTTATTGGGCCAGCAGAATTGACGGACA 720
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      ------------------------------------------------------------
                                                                                   

consensus_10298#0      TACCAGAGGACTATGAGCCACGTTACTGGGAATACCACAAACACCCTATTACGCGCTTCA 780
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      -----------TTGAGCCATGTCATTCAAGGTCTCTAACCATCGATTGCTACCATCTTGC 49
                                                                                   

consensus_10298#0      TTGCGAAGTACATGTGCGAACATCCTCAGAAGTTGTATGAATCTACTTTAGCGGAATTAG 840
consensus_10298#2      ------------------------------------------------------------
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      GAATCCCAACCAGGTGGTCTACATCTACCAACATGGCTCAGTCCAATTGTCAGTGACTTC 109
                                                                                   

consensus_10298#0      ATGAGTTTCGATTTACTAAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCA-A 899
consensus_10298#2      -----AGTCGGCACGAGAAGGAGCTGGTTGATGAAGAAAGATGGTTTCGTAAATCTCA-A 54
consensus_10298#3      --------------------TGTCTGTCTGGTATATAAACCGAGTATCCTTGAAATAA-A 39
consensus_10298#4      -----------------------GTGATTAACGTTTTAATTTCATTTTTCTAATAGAGTA 37
consensus_10298#1      ATGGATTTGTGCCACGTTTTGGTCTGTCCACCCTTAGTTTTCTTCCAACCTACTTCTACA 169
                                               **                                 *

consensus_10298#0      C--T-TGAAAAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATCC-AACTGGCGT 955
consensus_10298#2      C--T-TGAAAAGGGCGACTTTCGTGGTTGGTATTTTATCCCAGTTAATCC-AACTGGCGT 110
consensus_10298#3      TGAT-TCGCAAAGCTGAAGCT-GTAATTGGTGTTTTG--------GACAC-AATTGGAAG 88
consensus_10298#4      TAATGTTATGAATTTAAAAAGAAGGGTCTCTGATTTGTTG----TAATTT-TATGTCCGG 92
consensus_10298#1      CCATAAAACATCGCACGTCGGGGGAGTCAGTTGTTGGGCATACGTAACACGTGTCCGCGC 229
                          *                      *   *  **           *             

consensus_10298#0      GAATAGCTCATTTGAAAGACTCACAAAAGATCAAGAGGCTGGTCA-ACTAGTTA---GTC 1011
consensus_10298#2      GAATAGCTCATTTGAAAGACTCACAAAAGATCAAGAGGCTGGTCA-ACTAGTTA---GTC 166
consensus_10298#3      GGCTAGG-CGGACAAGGGACCGATAA--GGACGCTAGACTGCTCATACCAGTTGAACGTC 145
consensus_10298#4      CTTTTTATCACGTGGATTATCCACCAGTGGAGATACGACTTTTCCGATC----------- 141
consensus_10298#1      CATCTCAACTGATGAAGTTTCACTACTTCATCAATCGATTTGCCATTCTTATATA--GTA 287
                               *                           *  *   *                

consensus_10298#0      GTTGATTATAAAACTCATTTGAGAATAATACTTTGTATTATCTTTCATCTAAGTGCAGTT 1071
consensus_10298#2      GTTGATTATAAAACTCATTTGAGAATAATACTTTGTATTATCTTTCATCTAAGTGCAGTT 226
consensus_10298#3      ATTGATTTGGTACAGCGTTAAGATCGGAAAAGTCGTATT----TCGATTGGTGGATAATT 201
consensus_10298#4      -TTAACACTGTACCAAATCAATGACGTCCAACTGGTAT-------GAGCAGTCTAGCGTC 193
consensus_10298#1      CCCGTTTTTTAACAACTTCATTATTCAGTCGGTGGTCTCAG----GATATACGAACAATG 343
                                  *     *              * ** *        *           * 

consensus_10298#0      TATTTTAATCCTAAATCAAATGTTATGAAAAACTTCTGTTATTCATTCATTAATAAAAAA 1131
consensus_10298#2      TATTTTAATCCTAAATCANATGTTATGAAAAACTTCTGTTATTCNNTCATTANTAAAACN 286
consensus_10298#3      CATGT-GATAAAAAGCCAGACA-------------------------------------- 222
consensus_10298#4      CTTATTGGTC-------------------------------------------------- 203
consensus_10298#1      CTTCGAAGACACCTATAATCGAATACTAGTAACCTACGAATATCCTCTACTCTTACCGGN 403
                         *                                                         

consensus_10298#0      TTT--------------------------------------------------------- 1134
consensus_10298#2      NTTTANCNGTATTTACAACCCNCAANAAANNANNAACTCGAGGGGGGGGCCCGGTNCCCA 346
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      TATCTTTTCAGATCCGATCGTATAACTAGGATTTCACTTATTGTCTTCAACATCTTTATA 463
                                                                                   

consensus_10298#0      ------------------------------------------------------------
consensus_10298#2      NNTTCGCCCCTNTANGGGAGTCCGAATTACANCTTCACCTGGGCCGTCCGGTTTTACANC 406
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      TCTCGTGCTTTTTAATTGAAGAAGTTATGGNGCGGTGACTGAATGGTTAAAATGTACGTT 523
                                                                                   

consensus_10298#0      ------------------------------------------------------------
consensus_10298#2      GNCCGTGGNCTGGGGGAAAANCCCTGGGNGGTTACCCCAANCTTTAAACNCGCCTTTGGG 466
consensus_10298#3      ------------------------------------------------------------
consensus_10298#4      ------------------------------------------------------------
consensus_10298#1      TTCAACCGATAGGTCGCAAGTCTATACAATGTTCCACTTAGTTTGATAGAATCACTGAGT 583
                                                                                   

consensus_10298#0      --------------------------------------------
consensus_10298#2      ANGGAANAACCCCCCTTTTTNGGCNAGTTGGGGGNAAANNGGGG 510
consensus_10298#3      --------------------------------------------
consensus_10298#4      --------------------------------------------
consensus_10298#1      CT------------------------------------------ 585