cluster # 10299

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Schistosoma mansoni
cluster # 10299 cluster # 10299 Sequences # 15 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10299#0 length = 1658 sequences # 11
consensus_10299#1 length = 479 sequences # 2

consensus_10299#2 length = 241 sequences # 1
consensus_10299#3 length = 196 sequences # 1

consensusID : consensus_10299#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1658
fasta sequence

                              [CGGCACGAGGACTGAGCAAAGATTCCTTAAAATGCATTGGGTGTTCCACTGCATTTTAATAATACTGGCATGTTTGCGGTTTACATGTGCTGATACTCCTGCTAACTGTACTTATGAAGATGCGCATGGTCGTTGGAAGTTTCATATAGGTGATTATCAGTCTAAATGCCCTGAGAAGTTAAATTCAAAACAGTCTGTTGTTATCAGTCTCTTATACCCGGATATAGCTATTGATGAATTTGGAAATAGAGGGCATTGGACTCTAATCTATAATCAAGGGTTCGAAGTAACAATAAATCATCGCAAATGGCTAGTTATATTCGCCTACAAATCAAATGGAGAATTTAATTGCCATAAATCTATGCCAATGTGGACACATGACACTTTAATTCGACAGTGGAAGTGTTTTGTAGCCGAAAAGATTGGAGTGCATGATAAGTTTCATATTAATAAATTATTTGGTTCAAAAAGTTTCGGTAGAACTCTCTACCACATTAACCCTTCTTTTGTCGACAAAATAAATGCACATCAAAAATCTTGGCGAGCAGAAATTTATCCAGAATTATCAAAGTATACAATAGATGAACTCAGAAATCGAGCTGGTGGTGTAAAGTCTATGGTTACTAGACCTTCAGTGCTAAATAGGAAAACTCCATCAAAAGAACTAATTTCATTAACTGGAAATCTTCCTTTGGAATTTGACTGGACCAGTCCACCGGACGGTTCTAGAAGTCCTGTTACACCGATTCGTAACCAAGGTATATGTGGGAGTTGTTATGCATTCGCCTCTGCTGCTGCACTAGAAGCTCGTATTCGTTTGGTTAGTAATTTTTCCGAACAACCTATCTTGTCTCCTCAAGCTGTGGTTGACTGTAGCCCCTACTCCGAAGGATGTAATGGAGGTTTTCC-TTTCTTAATTGCTGGTAAATATGGAGAAG-ATTTTGG-TTTGTCTCAGAAAATTGTGA-TCCATATACTGGTGAAGATACTGGAAAGTGTACTGTATCAAAAAACTGTACACGTTACTATACAACAGATTATAGTTATATTGGTGGTTATTATGGCGCTACTAATGAGAAATTAATGCAGTTAGAACTTATTTCTAATGGTCCATTTCCTGTGGGTTTTGAAGTATATGAAGATTTTCAATTTTATAAAGAAGGCATCTACCACCATACGACAGTTCAAACGGATCATTACAATTTCAATCCATTCGAATTAACTAATCATGCTGTTTTATTGGTTGGTTATGGTGTGGATAAATTATCCGGTGAACCATATTGGAAAGTAAAAAATAGTTGGGGTGTTGAATGGGGTGAACAAGGTTATTTTCGAATACTTCGTGGTACAGATGAATGTGGTGTAGAAAGTTTAGGTGTACGTTTTGATCCGGTGTTATAAAATCATTTCTAGAATAGAGCCGGATATTGGTTTCCACATCA-TTTATTGAATTTTTTTTTATATGATTAAAGCGTTCACAAATGAACCGATTGATATTTGCCTCTTATTATAT-AATTATTTTGATTCATTATTTTTCTTTATGATCCTTTATTCATAACTACTAGACTTCTACTGATCCGCTAGAAATATATAGATATATGACAAATCATTAAATAAACTTTATTACTGCTGAAATTTTTGATATGTAATACAAAAATTTA]

[+] EMBL CD083569             [CGGCACGAGGACTGAGCAAAGATTCCTTAAAATGCA TGGGTGTTCCACTGCATTTTAATAATACTGGCATGTTTGCGGTTTACATGTGCTGATACTCCTGCTAACTGTACTTATGAAGATGCGCATGGTCGTTGGAAGTTTCATATAGGTGATTATCAGTCTAAATGCCCTGAGAAGTTAAATTCAAAACAGTCTGTTGTTATCAGTCTCTTATACCCGGATATAGCTATTGATGAATTTGGAAATAGAGGGCATTGGACTCTAATCTATAATCAAGGGTTCGAAGTAACAATAAATCATCGCAAATGGCTAGTTATATTCGCCTACAAATCAAATGGAGAATTTAATTGCCATAAATCTATGCCAATGTGGACACATGACACTTTAATTCGACAGTGGAAGTGTTTTGTAGCCGAAAAGATTGGAGTGCATGATAAGTTTCATATTAATAAATTATTTGGTTCAAAAAGTTTCGGTAGAACTCTCTACCACATTAACCCTTCTTTTGTCGACAAAATAAATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL SMCATHC              [                CAAAGATTCCTTAAAATGCATTGGGTGTTCCACTGCATTTTAATAATACTGGCATGTTTGCGGTTTACATGTGCTGATACTCCTGCTAACTGTACTTATGAAGATGCGCATGGTCGTTGGAAGTTTCATATAGGTGATTATCAGTCTAAATGCCCTGAGAAGTTAAATTCAAAACAGTCTGTTGTTATCAGTCTCTTATACCCGGATATAGCTATTGATGAATTTGGAAATAGAGGGCATTGGACTCTAATCTATAATCAAGGGTTCGAAGTAACAATAAATCATCGCAAATGGCTAGTTATATTCGCCTACAAATCAAATGGAGAATTTAATTGCCATAAATCTATGCCAATGTGGACACATGACACTTTAA TCGACAGTGGAAGTG TTTGTAG CGGAAAGATTGGAGTGCATGATAAGTTTCATATTAATAAATTATTTGGTTCAAAAAGTTTCGGTAGAACTCTCTACCACATTAACCCTTCTTTTGTCGGCAAAATAAATGCACATCAAAAATCTTGGCGGGGAGAAATTTATCCAGAATTATCAAAGTATACAATAGATGAACTCAGAAATCGAGCTGGTGGTGTAAAGTCTATGGTTACTAGACCTTCAGTGCTAAATAGGAAAACTCCATCAAAAGAACTAATTTCATTAACTGGAAATCTTCCTTTGGAATTTGACTGGACCAGTCCACCGGACGGTTCTAGAAGTCCTGTTACACCGATTCGTAACCAAGGTATATGTGGGAGTTGTTATGCATCCCCCTCTGCTGCTGCACTAGAAGCTCGTATTCGTTTGGTTAGTAATTTTTCCGAACAACCTATCTTGTCTCCTCAAACTGTGGTTGACTGTAGCCCCTACTCCGAAGGATGTAATGGAGGTTTTCC TTTCTTAATTGCTGGTAAATATGGAGAAG ATTTTGG TTTGCCTCAGAAAATTGTGATTCCATATACTGGTGAAGATACTGGAAAGTGTACTGTATCAAAAAACTGTACACGTTACTATACAACAGATTATAGTTATATTGGTGGTTATTATGGCGCTACTAATGAGAAATTAATGCAGTTAGAACTTATTTCTAATGGTCCATTTCCTGTGGGTTTTGAAGTATATGAAGATTTTCAATTTTATAAAGAAGGCATCTACCACCATACGACAGTTCAAACGGATCATTACAATTTCAATCCATTCGAATTAACTAATCATGCTGTTTTATTGGTTGGTTATGGTGTGGATAAATTATCCGGTGAACCATATTGGAAAGTAAAAAATAGTTGGGGTGTTGAATGGGGTGAACAAGGTTATTTTCGAATACTTCGTGGTACAGATGAATGTGGTGTAGAAAGTTTAGGTGTACGTTTTGATCCGGTGTTATAAAATCATTTCTAGAATAGAGCCGGATATTGGTTTCCACATCA TTTATTGAATTTTTTTTTATATGATTAAAGCGTTCACAAATGAACCGATTGATATTTGCCTCTTATTATAT AATTATTTTGATTCATTATTTTTCTTTATGATCCTTTATTCATAACTACTAGACTTCTACTGATCCGCTAGAAATATATAGATATATGACAAATCATTAAATAAACTTTATTACTGCTGAAATTTTTGATATGTAATACAAAAATTTA]
[+] EMBL AI977403             [                       TCCTTAAAATGCATTGGGTGTTCCACTGCATTTTAATAATACTGGCATGTTTGCGGTTTACATGTGCTGATACTCCTGCTAACTGTACTTATGAAGATGCGCATGGTCGTTGGAAGTTTCATATAGGTGATTATCAGTCTAAATGCCCTGAGAAGTTAAATTCAAAACAGTCTGTTGTTATCAGTCTCTTATACCCGGATATAGCTATTGATGAATTTGGAAATAGAGGGCATTGGACTCTAATCTATAATCAAGGGTTCGAAGTAACAATAAATCATCGCAAATGGCTAGTTATATTCGCCTACAAATCAAATGGAGAATTTAATTGCCATAAATCTATGCCAATGTGGACACATGACACTTTAATTCGACAGTGGAAGTGTTTTGTAGCCGAAAAGATTGGAGTGCATGATAAGTTTCATATTAATAAATTATTTGG TCAAAAAGTTTCGGTAGAACTCTCTACCACATTAACCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BG931875             [                                                                                                                                                                                                            CAGTCTCTTATACCCGGATATAGCTATTGATGAATTTGGAAATAGAGGGCATTGGACTCTAATCTATAATCAAGGGTTCGAAGTAACAATAAATCATCGCAAATGGCTAGTTATATTCGCCTACAAATCAAATGGAGAATTTAATTGCCATAAATCTATGCCAATGTGGACACATGACACTTTAATTCGACAGTGGAAGTGTTTTGTAGCCGAAAAGATTGGAGTGCATGATAAGTTTCATATTAATAAATTATTTGGTTCAAAAAGTTTCGGTAGAACTCTCTACCACATTAACCCTTCTTTTGTCGACAAAATAAATGCACATCAAAAATCTTGGCGAGCAGAAATTTATCCAGAATTATCAAAGTATACAATAGATGAACTCAGAAATCGAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD063896             [                                                                                                                                                                                                                                                                                                                              ATTCGCCTACAAATCAAATGGAGAATTTAATTGCCATAAATCTATGCCAATGTGGACACATGACACTTTAATTCGACAGTGGAAGTGTTTTGTAGCCGAAAAGATTGGAGTGCATGATAAGTTTCATATTAATAAATTATTTGGTTCAAAAAGTTTCGGTAGAACTCTCTACCACATTAACCCTTCTTTTGTCGACAAAATAAATGCACATCAAAAATCTTGGCGAGCAGAAATTTATCCAGAATTATCAAAGTATACAATAGATGAACTCAGAAATCGAGCTGGTGGTGTAAAGTCTATGGTTACTAGACCTTCAGTGCTAAATAGGAAAACTCCATCAAAAGAACTAATTTCATTAACTGGAAATCTTCCTTTGGAATTTGACTGGACCAGTCCACCGGACGGTTCTAGAAGTCCTGTTACACCGATTCGTAACCAAGGTATATGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AI975568             [                                                                                                                                                                                                                                                                                                                                    CTACAAATCAAATGGAGAATTTAATTGCCATAAATCTATGCCAATGTGGACACATGACACTTTAATTCGACAGTGGAAGTGTTTTGTAGCCGAAAAGATTGGAGTGCATGATAAGTTTCATATTAATAAATTATTTGGTTCAAAAAGTTTCGGTAGAACTCTCTACCACATTAACCCTTCTTTTGTCGACAAAATAAATGCACATCAAAAATCTTGGCGAGCAGAAATTTATCCAGAATTATCAAAGTATACAATAGATGAACTCAGAAATCGAGCTGGTGGTGTAAAGTCTATGGTTACTAGACCTTCAGTGCTAAATAGGAAAACTCCATCAAAAGAACTAATTTCATTAACTGGAAATCTTCCTTTGGAATTTGACTGGACCAGTCCACCGGACGGTTCTAGAAGTCCTGTTACACCGATTCGTAACCAAGGTATATGTGGGAGTTGTTATGCATTCGCCTCTGCTGCTGCACTAGAAGCTCGTATTCGTTTGGTTAGTAATTTTTCCGAACAACCTATCTTGTCTCCTCAAGCTGTGGTTGACTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD160300             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCCTTTGGAATTTGACTGGACCAGTCCACCGGACGGTTCTAGAAGTCCTGTTACACCGATTCGTAACCAAGGTATATGTGGGAGTTGTTATGCATTCGCCTCTGCTGCTGCACTAGAAGCTCGTATTCGTTTGGTTAGTAATTTTTCCGAACAACCTATCTTGTCTCCTCAAGCTGTGGTTGACTGTAGCCCCTACTCCGAAGGATGTAATGGAGGTTTTCC TTTCTTAATTGCTGGTAAATATGGAGAAG ATTTTGGTTTTGTCTCAGAAAATTGTGA TCCATATACTGGTGAAGATACTGGAAAGTGTACTGTATCAAAAAACTGTACACGTTAATATACAACAGATTATAGTTATATTGGTGGTTATTATGac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD160397             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCGTAACCAAAGTATATGTGGGATTTGTTATGCATTCGGCTCTGCTGCTGCACTAGAAGCTCGTATTCG TTGGTTAGTAATTTTTCCGAACAACCTATCTTGTCTCCTCAAGCTGTGGTTGACTGTAGCCCCTACTCCGAAGGATGTAATGGAGGTTTTCC TTTCTTAATTGCTGGTAAATATGGAGAAG ATTTTGGTTTTGTCTCAGAAAATTGTGA TCCATATACTGGTGAAGATACTGGAAAGTGTACTGTATCAAAAAACTGTACACGTTACTATACAACAGATTATAGTTATATTGGTGGTTATTATGGCGCTACTAATGAGAAATTACTGCAGTTAGAACTTATTTCTAATGGTCCATTTCCTGTGGGTTTTGAAGTATATGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD077367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGTAACCAAGGTATATGTGGGAGTTGTTATGCATTCGCCTCTGCTGCTGCACTAGAAGCTCGTATTCGTTTGGTTAGTAATTTTTCCGAACAACCTATCTTGTCTCCTCAAGCTGTGGTTGACTGTAGCCCCTACTCCGAAGGATGTAATGGAGGTTTTCC TTTCTTAATTGCTGGTAAATATGGAGAAG ATTTTGGTTTTGTCTCAGAAAATTGTGA TCCATATACTGGTGAAGATACTGGAAAGTGTACTGTATCAAAAAACTGTACACGTTACTATACAACAGATTATAGTTATATTGGTGGTTATTATGGCGCTACTAATGAGAAATTAATGCAGTTAGAACTTATTTCTAATGGTCCATTTCCTGTGGGTTTTGACGTATATGAAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD158010             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TATATGTGGGAGTTGTTATGCATTCGCCTCTGCTGCTGCACTAGAAGCTCGTATTCGTTTGGTTAGTAATTTTTCCGAACAACCTATCTTGTCTCCTCAAGCTGTGGTTGACTGTAGCCCCTACTCCGAAGGATGTAATGGAGGTTTTCCTTTTCTTAATTGCTGGTAAATATGGAGAAGAATTTTGG TTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD160342             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CATTTCCTGTGGTTTTTGAAGTATATGAAGATTTTCAATTTTATAAAGAAGGCATCTACCACCATACGACAGTTCAAAACGATCATCACAATTTCAATCCATTCGAATNAACTAATCATGCTGTTTTATTGGTTGGTTATGGTGTGGATAAATTATCCGGTGAACCATATTGGAAAGTAAAAAATAGTTGGGGTGTTGAATGGGGTGAACAAGGTTATTTTCGAATACTTCGTGGTACAGATGAATGTGGTGTAGAAAGTTTAGGTGTACGTTTTGATCCGGTGTTATAAAATTATTTCTAGAAT GAGACGGATATTGGTTTCCACATCATTTTATTGAATTTTTTTTTATATGATTAAAGCGTTCACAAATGAACCGATTGATATTTGCCTCTTATTATATGAATTATTTTGATTCATTATTTTTCTTTATGATCCTTTATTC                                                                                                           ]




>consensus_10299#0
CGGCACGAGGACTGAGCAAAGATTCCTTAAAATGCATTGGGTGTTCCACTGCATTTTAAT
AATACTGGCATGTTTGCGGTTTACATGTGCTGATACTCCTGCTAACTGTACTTATGAAGA
TGCGCATGGTCGTTGGAAGTTTCATATAGGTGATTATCAGTCTAAATGCCCTGAGAAGTT
AAATTCAAAACAGTCTGTTGTTATCAGTCTCTTATACCCGGATATAGCTATTGATGAATT
TGGAAATAGAGGGCATTGGACTCTAATCTATAATCAAGGGTTCGAAGTAACAATAAATCA
TCGCAAATGGCTAGTTATATTCGCCTACAAATCAAATGGAGAATTTAATTGCCATAAATC
TATGCCAATGTGGACACATGACACTTTAATTCGACAGTGGAAGTGTTTTGTAGCCGAAAA
GATTGGAGTGCATGATAAGTTTCATATTAATAAATTATTTGGTTCAAAAAGTTTCGGTAG
AACTCTCTACCACATTAACCCTTCTTTTGTCGACAAAATAAATGCACATCAAAAATCTTG
GCGAGCAGAAATTTATCCAGAATTATCAAAGTATACAATAGATGAACTCAGAAATCGAGC
TGGTGGTGTAAAGTCTATGGTTACTAGACCTTCAGTGCTAAATAGGAAAACTCCATCAAA
AGAACTAATTTCATTAACTGGAAATCTTCCTTTGGAATTTGACTGGACCAGTCCACCGGA
CGGTTCTAGAAGTCCTGTTACACCGATTCGTAACCAAGGTATATGTGGGAGTTGTTATGC
ATTCGCCTCTGCTGCTGCACTAGAAGCTCGTATTCGTTTGGTTAGTAATTTTTCCGAACA
ACCTATCTTGTCTCCTCAAGCTGTGGTTGACTGTAGCCCCTACTCCGAAGGATGTAATGG
AGGTTTTCCTTTCTTAATTGCTGGTAAATATGGAGAAGATTTTGGTTTGTCTCAGAAAAT
TGTGATCCATATACTGGTGAAGATACTGGAAAGTGTACTGTATCAAAAAACTGTACACGT
TACTATACAACAGATTATAGTTATATTGGTGGTTATTATGGCGCTACTAATGAGAAATTA
ATGCAGTTAGAACTTATTTCTAATGGTCCATTTCCTGTGGGTTTTGAAGTATATGAAGAT
TTTCAATTTTATAAAGAAGGCATCTACCACCATACGACAGTTCAAACGGATCATTACAAT
TTCAATCCATTCGAATTAACTAATCATGCTGTTTTATTGGTTGGTTATGGTGTGGATAAA
TTATCCGGTGAACCATATTGGAAAGTAAAAAATAGTTGGGGTGTTGAATGGGGTGAACAA
GGTTATTTTCGAATACTTCGTGGTACAGATGAATGTGGTGTAGAAAGTTTAGGTGTACGT
TTTGATCCGGTGTTATAAAATCATTTCTAGAATAGAGCCGGATATTGGTTTCCACATCAT
TTATTGAATTTTTTTTTATATGATTAAAGCGTTCACAAATGAACCGATTGATATTTGCCT
CTTATTATATAATTATTTTGATTCATTATTTTTCTTTATGATCCTTTATTCATAACTACT
AGACTTCTACTGATCCGCTAGAAATATATAGATATATGACAAATCATTAAATAAACTTTA
TTACTGCTGAAATTTTTGATATGTAATACAAAAATTTA

consensusID : consensus_10299#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 479
fasta sequence

                              [GTTCAAAACGATCATTACAATTTCAATCCATTCGAATTAACTAATCATGCTGTTTTATTGGTTGGTTATGGTGTGGACAAATTATCCGGTGAACCATATTGGAAAGTAAAAAATAGTTGGGGTGTTGAATGGGGTGAACAAGGTTATTTTCGAATACTTCGTGGTACAGATGAATGTGGTGTAGAAAGTTTAGGTGTACGTTTTGATCCGGTGTTATAAAATCATTTCTAGAATGAGACGGATATTGGTTTCCACATCATTTTATTGAA-TTTTTTTTTATATGATTAAAGCGTTCACAAATGAACCGATTGATATTTGCCTCTTATTATATGAATTATTTTGATTCATTATTTTTCTTTATGATCCTTTATTCATAACTACTAGACTTTTACTGATCCGCTAGAAATATATAGATATATGACAAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGT]

[-] EMBL AI975663             [GTTCAAAACGATCATTACAATTTCAATCCATTCGAATTAACTAATCATGCTGTTTTATTGGTTGGTTATGGTGTGGACAAATTATCCGGTGAACCATATTGGAAAGTAAAAAATAGTTGGGGTGTTGAATGGGGTGAACAAGGTTATTTTCGAATACTTCGTGGTACAGATGAATGTGGTGTAGAAAGTTTAGGTGTACGTTTTGATCCGGTGTTATAAAATCATTTCTAGAATGAGACGGATATTGGTTTCCACATCATTTTATTGAA TTTTTTTTTATATGATTAAAGCGTTCACAAATGAACCGATTGATATTTGCCTCTTATTATATGAATTATTTTGATTCATTATTTTTCTTTATGATCCTTTATTCATAACTACTAGACTTTTACTGATCCGCTAGAAATATATAGATATATGACAAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGT]
[-] EMBL CD136727             [                                        CTAATCATGCTGTTTTATTGGTTGGTTATGGTGTGGATAAATTATCCGGTGAACCATATTGGAAAGTAAAAAATAGTTGGGGTGTTGAATGGGGTGAACAAGGTTATTTTCGAATACTTCGTGGTACAGATGAATGTGGTGTAGAAAGTTTAGGTGTACGTTTTGATCCGGTGTTATAAAATCATTTCTAGAATGAGACGGATATTGGTTTCCACATCATTTTATTGAATTTTTTTTTTATATGATTAAAGCGTTCACAAATGAACCGATTGATATTTGCCTCTTATTATATGAATTATTTTGATTCATTATTTTTCTTTATGATCCTTTATTCATAACTACTAGACTTCTACTGATCCGCTAGAAAT                                                                        ]




>consensus_10299#1
GTTCAAAACGATCATTACAATTTCAATCCATTCGAATTAACTAATCATGCTGTTTTATTG
GTTGGTTATGGTGTGGACAAATTATCCGGTGAACCATATTGGAAAGTAAAAAATAGTTGG
GGTGTTGAATGGGGTGAACAAGGTTATTTTCGAATACTTCGTGGTACAGATGAATGTGGT
GTAGAAAGTTTAGGTGTACGTTTTGATCCGGTGTTATAAAATCATTTCTAGAATGAGACG
GATATTGGTTTCCACATCATTTTATTGAATTTTTTTTTATATGATTAAAGCGTTCACAAA
TGAACCGATTGATATTTGCCTCTTATTATATGAATTATTTTGATTCATTATTTTTCTTTA
TGATCCTTTATTCATAACTACTAGACTTTTACTGATCCGCTAGAAATATATAGATATATG
ACAAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGT

consensusID : consensus_10299#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 241
fasta sequence

                              [TCGCAGGCCAGAATTCGTTCCGAGGAGGGTTCGAAGTAACAATAAATCATCGCAAATGGCTAGTTATATTCGCCTACAAATCAAATGGAGAATTTAATTGCCATAAATCTATGCCAATGTGGACACATGACACTTTAATTCGACAGTGGAAGTGTTTTGTAGCCGAAAAGATTGGAGTGCATGATAAGTTTCATATTAATAAATTATTTTGGTCAAAAAGTTTCGGTAGAACTCTCTACCA]

[+] EMBL CD078220             [TCGCAGGCCAGAATTCGTTCCGAGGAGGGTTCGAAGTAACAATAAATCATCGCAAATGGCTAGTTATATTCGCCTACAAATCAAATGGAGAATTTAATTGCCATAAATCTATGCCAATGTGGACACATGACACTTTAATTCGACAGTGGAAGTGTTTTGTAGCCGAAAAGATTGGAGTGCATGATAAGTTTCATATTAATAAATTATTTTGGTCAAAAAGTTTCGGTAGAACTCTCTACCA]




>consensus_10299#2
TCGCAGGCCAGAATTCGTTCCGAGGAGGGTTCGAAGTAACAATAAATCATCGCAAATGGC
TAGTTATATTCGCCTACAAATCAAATGGAGAATTTAATTGCCATAAATCTATGCCAATGT
GGACACATGACACTTTAATTCGACAGTGGAAGTGTTTTGTAGCCGAAAAGATTGGAGTGC
ATGATAAGTTTCATATTAATAAATTATTTTGGTCAAAAAGTTTCGGTAGAACTCTCTACC
A

consensusID : consensus_10299#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 196
fasta sequence

                              [CTCGCAGCCAGGAATTCGGTCCGAGGTTCAATTCAAACTTTACTGAGCAAAGATTCCTTAAAATGCATTGGGTGTTCCACTGCATTTTAATAATACTGGCATGTTTGCGGTTTACATGTGCTGATACTCCTGCTAACTGTACTTATGAAGATGCGCATGGTCGTTGGAAGTTCATATAGGTGATATCAGTCTAAAT]

[+] EMBL CD078027             [CTCGCAGCCAGGAATTCGGTCCGAGGTTCAATTCAAACTTTACTGAGCAAAGATTCCTTAAAATGCATTGGGTGTTCCACTGCATTTTAATAATACTGGCATGTTTGCGGTTTACATGTGCTGATACTCCTGCTAACTGTACTTATGAAGATGCGCATGGTCGTTGGAAGTTCATATAGGTGATATCAGTCTAAAT]




>consensus_10299#3
CTCGCAGCCAGGAATTCGGTCCGAGGTTCAATTCAAACTTTACTGAGCAAAGATTCCTTA
AAATGCATTGGGTGTTCCACTGCATTTTAATAATACTGGCATGTTTGCGGTTTACATGTG
CTGATACTCCTGCTAACTGTACTTATGAAGATGCGCATGGTCGTTGGAAGTTCATATAGG
TGATATCAGTCTAAAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10299#0      CGGCACGAGGACTGAGCAAAGATTCCTTAAAATGCATTGGGTGTTCCACTGCATTTTAAT 60
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      AATACTGGCATGTTTGCGGTTTACATGTGCTGATACTCCTGCTAACTGTACTTATGAAGA 120
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      TGCGCATGGTCGTTGGAAGTTTCATATAGGTGATTATCAGTCTAAATGCCCTGAGAAGTT 180
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      AAATTCAAAACAGTCTGTTGTTATCAGTCTCTTATACCCGGATATAGCTATTGATGAATT 240
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      TGGAAATAGAGGGCATTGGACTCTAATCTATAATCAAGGGTTCGAAGTAACAATAAATCA 300
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      TCGCAAATGGCTAGTTATATTCGCCTACAAATCAAATGGAGAATTTAATTGCCATAAATC 360
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      TATGCCAATGTGGACACATGACACTTTAATTCGACAGTGGAAGTGTTTTGTAGCCGAAAA 420
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      GATTGGAGTGCATGATAAGTTTCATATTAATAAATTATTTGGTTCAAAAAGTTTCGGTAG 480
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      AACTCTCTACCACATTAACCCTTCTTTTGTCGACAAAATAAATGCACATCAAAAATCTTG 540
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      GCGAGCAGAAATTTATCCAGAATTATCAAAGTATACAATAGATGAACTCAGAAATCGAGC 600
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      TGGTGGTGTAAAGTCTATGGTTACTAGACCTTCAGTGCTAAATAGGAAAACTCCATCAAA 660
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      AGAACTAATTTCATTAACTGGAAATCTTCCTTTGGAATTTGACTGGACCAGTCCACCGGA 720
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      CGGTTCTAGAAGTCCTGTTACACCGATTCGTAACCAAGGTATATGTGGGAGTTGTTATGC 780
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      ATTCGCCTCTGCTGCTGCACTAGAAGCTCGTATTCGTTTGGTTAGTAATTTTTCCGAACA 840
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      ACCTATCTTGTCTCCTCAAGCTGTGGTTGACTGTAGCCCCTACTCCGAAGGATGTAATGG 900
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      AGGTTTTCCTTTCTTAATTGCTGGTAAATATGGAGAAGATTTTGGTTTGTCTCAGAAAAT 960
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      TGTGATCCATATACTGGTGAAGATACTGGAAAGTGTACTGTATCAAAAAACTGTACACGT 1020
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      TACTATACAACAGATTATAGTTATATTGGTGGTTATTATGGCGCTACTAATGAGAAATTA 1080
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      ATGCAGTTAGAACTTATTTCTAATGGTCCATTTCCTGTGGGTTTTGAAGTATATGAAGAT 1140
consensus_10299#1      ------------------------------------------------------------
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      TTTCAATTTTATAAAGAAGGCATCTACCACCATACGACAGTTCAAACGGATCATTACAAT 1200
consensus_10299#1      ---------------------------------------GTTCAAAACGATCATTACAAT 21
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      TTCAATCCATTCGAATTAACTAATCATGCTGTTTTATTGGTTGGTTATGGTGTGGATAAA 1260
consensus_10299#1      TTCAATCCATTCGAATTAACTAATCATGCTGTTTTATTGGTTGGTTATGGTGTGGACAAA 81
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      TTATCCGGTGAACCATATTGGAAAGTAAAAAATAGTTGGGGTGTTGAATGGGGTGAACAA 1320
consensus_10299#1      TTATCCGGTGAACCATATTGGAAAGTAAAAAATAGTTGGGGTGTTGAATGGGGTGAACAA 141
consensus_10299#2      ------------------TCGCAGGCCAGAATTCGTTCCGAGGAGGGTTCGAAGTAACAA 42
consensus_10299#3      -----------------CTCGCAGCCAGGAATTCGGTCCGAGGTTCAATTCAAACTTTAC 43
                                         * * *      ** * * *  *  *     *         * 

consensus_10299#0      GGTTATTTTCGAATACTTCGTGGTACAGATGAATGTGGTGTAGAAAGTTTAGGTGTACGT 1380
consensus_10299#1      GGTTATTTTCGAATACTTCGTGGTACAGATGAATGTGGTGTAGAAAGTTTAGGTGTACGT 201
consensus_10299#2      TAA-ATCATCGCAAA-----TGGC-TAGTTATAT-TCGCCTACAAA--TCAAATGGAGAA 92
consensus_10299#3      TGA-------GCAAA------GATTCCTTAAAAT---GCATTGGGTGTTCCACTGCA--T 85
                                 * * *      *          **   *  *       *    ** *   

consensus_10299#0      TTTGATCCGGTGTTATAAAATCATTTCTAGAATAGAGCCGGA-TATTGGTT-TCCACATC 1438
consensus_10299#1      TTTGATCCGGTGTTATAAAATCATTTCTAGAAT-GAGACGGA-TATTGGTT-TCCACATC 258
consensus_10299#2      TTTAAT----TGCCATAAATCTATGCC---AATGTGGACACA-TGACACTT-TA---ATT 140
consensus_10299#3      TTTAAT-------AATACTGGCATGTTTGCGGTTTACATGTGCTGATACTCCTGCTAACT 138
                       *** **        ***     **        *          *     *  *    *  

consensus_10299#0      ATTT-ATTGAATTTTTTTTTATATGATTAAAGCGTTCACAAATGAACCGATTGATATTTG 1497
consensus_10299#1      ATTTTATTGAATTTTTTTTTATATGATTAAAGCGTTCACAAATGAACCGATTGATATTTG 318
consensus_10299#2      CGACAGTGGAAGTGTTTTGTAGCCGA--AAAG--------ATTGGAGTGCATGATAA--G 188
consensus_10299#3      GTACTTATGAAGATGCGCATGGTCGTTGGAAG---------TTCATATAGGTGATATCAG 189
                               ***        *    *    ***          *        *****   *

consensus_10299#0      CCTCTTATTATAT-AATTATTTTGATTCATTATTTTTCTTTATGATCCTTTATTCATAAC 1556
consensus_10299#1      CCTCTTATTATATGAATTATTTTGATTCATTATTTTTCTTTATGATCCTTTATTCATAAC 378
consensus_10299#2      TTTCATATTA-ATAAATTATTTTGGT-CAAAAAGTTTCGGTAGAACTCTCTACCA----- 241
consensus_10299#3      TCTAA-AT---------------------------------------------------- 196
                         *   **                                                    

consensus_10299#0      TACTAGACTTCTACTGATCCGCTAGAAATATATAGATATATGACAAATCATTAAATAAAC 1616
consensus_10299#1      TACTAGACTTTTACTGATCCGCTAGAAATATATAGATATATGACAAATCAAAAAAAAAAA 438
consensus_10299#2      ------------------------------------------------------------
consensus_10299#3      ------------------------------------------------------------
                                                                                   

consensus_10299#0      TTTATTACTGCTGAAATTTTTGATATGTAA-TACAAAAATTTA 1658
consensus_10299#1      AAAAAAAAAAAAAAAAACAT-GCCATGCAGCTGCATTACCGT- 479
consensus_10299#2      -------------------------------------------
consensus_10299#3      -------------------------------------------