cluster # 10300

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Schistosoma mansoni
cluster # 10300 cluster # 10300 Sequences # 15 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10300#0 length = 924 sequences # 8

consensus_10300#1 length = 562 sequences # 6
consensus_10300#2 length = 310 sequences # 1

consensusID : consensus_10300#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 924
fasta sequence

                              [AGGCCATTAATTCGGCACGAGGGATTACAAATATATTATTTATTGTTTACTAATGATTTTTAATATGTACTTCGTGTCCAGTAGGTGGTAAGCAAACGAACTATGAATACTAGTTTTTCCTCTAAGTTTTAGATTATTTAGAATATGCTCGATAGACCATTATGAAATTGTACTTTCTTTGACTTGGTGGTACTGTTACACTGTTAATGGCAATAAAAGTATAGTATCGGATTTTATCTGCATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGTTTTGAAAGGAATTCGACACGTCTTTCGGATATTCCACACACAGGTGATGCACAAAACCCATTTCCCAAGATCATATCAATACCATCTACGTGTCAACGACTAATGGGCTACATGATGGCGAAGTCGGAAGGTCATGGAGTGGACTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCCGAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCAAACAAACTGGGCATAGATATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAATTACTACTGGGGTTCTGTTGAAGATGAAGATGCTTTCGATATGAGGAAAGCACTTTCAGCAGATGTGCTTAAACGATCTGTTATACCAATGACGAGGCCGATACGTCCAGAAGAGTTAGAACATCCATGAACATACA-AATG-A-AACTTGGTTCTACAGTGTGGCTTTATATGTAACGTTAATCAGTGGTTCTAAGTACTTGTAAATGTATATTTTGTAACCAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAANNNNNAAAAAAAAAAAAAAA]

[+] EMBL CD081802             [AGGCCATTAATTCGGCACGAGGGATTACAAATATATTATTTATTGTTTACTAATGATTTTTAATATGTACTTCGTGTCCAGTAGGTGGTAAGCAAACGAACTATGAATACTAGTTTTTCCTCTAAGTTTTAGATTATTTAGAATATGCTCGATAGACCATTATGAAATTGTACTTTCTTTGACTTGGTGGTACTGTTACACTGTTAATGGCAATAAAAGTATAGTATCGGATTTTATCTGCATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGTTTTGAAAGGAATTCGACACGTCTTTCGGATATTCCACACACAGGTGATGCACAAAACCCATTTCCCAAGATCATATCAATACCATCTACGTGTCAACGACTAATGGGCTACATGATGGCGAAGTCGGAAGGTCATGGAGTGGACTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCCGAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCAAACAAACTGGGCATAGATATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAATTACTACTGGGGTTCTGTTGAAGATGAAGATGCTTTCGATATGAGGAAAGCACTTTCAGCAGATGTGCTTAAACGATCTGTTATACCAATGACGAGGCCGATACGTNCAGAAGAGTTAGAACATCCATGAACATACANNATG A AACTTGGTTCTACAGTGTGGCTNTATATGTAACGTTAATCAGTGGTTCTAAGTACTTGTAANTGTAT                                                                       ]
[+] EMBL CD081710             [gaGCCTTTAATTCGGCACGA CGATTACAAATATATTATTTATTGTTTACTAATGATTTTTAATATGTACTTCGTGTCCAGTAGGTGGTAAGCAAACGAACTATGAATACTAGTTTTTCCTCTAAGTTTTAGATTATTTAGAATATGCTCGATAGACCATTATGAAATTGTACTTTCTTTGACTTGGTGGTACTGTTACACTGTTAATGGCAATAAAAGTATAGTATCGGATTTTATCTGCATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGTTTTGAAAGGAATTCGACACGTCTTTCGGATATTCCACACACAGGTGATGCACAAAACCCATTTCCCAAGATCATATCAATACCATCTACGTGTCAACGACTAATGGGCTACATGATGGCGAAGTCGGAAGGTCATGGAGTGGACTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCCGAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCAAACAAACTGGGCATAGATATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAATTACTACTGGGGTTCTGTTGAAGATGAAGATGCTTTCGATATGAGGAAAGCACTTTCAGCAGATGTGCTTAAACGATCTGTTATACCAATGACGAGGCCGATACGTCCAGAAGAGTTAGAACATCCATGAACATACA AATG ANAACTTGGTTCTACAGTGTGGCTTTATATGTAACGTTAATCAGTGGTTCTAAGTACTTGTAAATGTAT                                                                       ]
[-] EMBL CD075533             [                                                     TGATTTTTAATATGTACTTCGTGTCCAGTAGGTGGTAAGCAAACGAACTATGAATACTAGTTTTTCCTCTAAGTTTTAGATTATTTAGAATATGCTCGATAGACCATTATGAAATTGTACTTTCTTTGACTTGGTGGTACTGTTACACTGTTAATGGCAATAAAAGTATAGTATCGGATTTTATCTGCATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGTTTTGAAAGGAATTCGACACGTCTTTCGGATATTCCACACACAGGTGATGCACAAAACCCATTTCCCAAGATCATATCAATACCATCTACGTGTCAACGACTAATGGGCTACATGATGGCGAAGTCGGAAGGTCATGGAGTGGACTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCCGAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCAAACAAACTGGGCATAGATATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAATTACTACTGGGGTTCTGTTGAAGATGAAGATGCTTTCGATATGAGGAAAGCACTTTCAGCAGATGTGCTTAAACGATCTGTTATACCAATGACGAGGCCGATACGTCCAGAAGAGTTAGAACATCCATGAACATACA AATGAA AACTTGGTTCTACAGTGTGGCTTTATATGTAACGTTAATCAGTGGTTCTGGGTACTTGTAAATGTAaa                                                                      ]
[-] EMBL CD097862             [                                                                                                                                       ATTTAG ATATGCTCGATAGACCATTATGAAATTGCACTTTCTTTGACTTGGTGGTACTGTTACACTGTTAATGGCAATAAAAGTATAGTATCGGATTTTATCTGCATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGTTTTGAAAGGAATTCGACGCGTCTTTCGGATATTCCACACACAGGTGATGCACAAAACCCATTTCCCAAGATCATATCAATACCATCTACGTGTCAACGACTAATGGGCTACATGATGGCGAAGTCGGAAGGTCATGGAGTGGACTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCCGAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCAAACAAACTGGGCAT                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD133210             [                                                                                                                                                                                                                                                                                                                                                                                                        TCAACGACTAATGGGCTACATGATGGCGAAGTCGGAAGGTCATGGAGTGGACTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCCGAATATCGTCGTCTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCAAACAAACTGGGCATAGATATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAATTACTACTGGGGTTCTGTTGAAGATGAAGATGCTTTCGATATGAGGAAAGCACTTTCAGCAGATGTGCTTAAACGATCTGTTATACCAATGACGAGG                                                                                                                                                                                          ]
[-] EMBL AI394799             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTAATATGTCGACCTATTTGTACGTGCATCAAACAAACTGGGCATAGATATTTATAGTAAATTGGGGTATATTATATTTCGCAGTGTTTTAAATTACTACTGGGGTTTTGTTGAAGATGAAGATGCTTTCGATATGGGGAAAGCACTTTCAGCAGATGTGCTTAAACGATTTGTTATACCAATGACGAGGCCGATACGTCCAGAAGAGTTAGAACATCCATGAACATACA AATGAA AAATTGGTTTTACAGTGTGGCTTTATATGTAACGTTAATCAGTGGTTTTAAGTACTTGTAAATGTTTTTTTTGTAACCAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAANNNNNAAAAAAAAAAAAAAA]
[-] EMBL AI395203             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGAACGG AACGAT TTACTATGTGGA CTATTCGTACGTGCATCAAACAAACTGGGCATAGATATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAATTACTACTGGGGTTCTGTTGAAGATGAAGATGCTTTCGATATGAGGAAAGCACTTTCAGCAGATGTGCTTAAACGATCTGTTATACCAATGACGAGGCCGATACGTCCAGAAGAGTTAGAACATCCATGAACATACA AATGAA AACTTGGTTCTACAGTGTGGCTTTATATGTAACGTTAATCAGTGGTTCTAAGTACTTGTAAATGTATCTTTTGTAACAAAAAAAAAAAAAAAAA                                            ]
[+] EMBL CD198410             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TAAATAGGGGTATATTATATATCGCAGAGTCTTAAATTACTACTGGGGTTCTGTCGAAGATGAAGATGCTTTCGATATGAGGAAAGCACTTTCAGCAGATGTGCTTAAACGATCTGTTATACCAATGACGAGGCCGATACGTCCAGAAGAGTTAGAACATCCATGAACATACA AATG A AA                                                                                                                                        ]




>consensus_10300#0
AGGCCATTAATTCGGCACGAGGGATTACAAATATATTATTTATTGTTTACTAATGATTTT
TAATATGTACTTCGTGTCCAGTAGGTGGTAAGCAAACGAACTATGAATACTAGTTTTTCC
TCTAAGTTTTAGATTATTTAGAATATGCTCGATAGACCATTATGAAATTGTACTTTCTTT
GACTTGGTGGTACTGTTACACTGTTAATGGCAATAAAAGTATAGTATCGGATTTTATCTG
CATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGT
TTTGAAAGGAATTCGACACGTCTTTCGGATATTCCACACACAGGTGATGCACAAAACCCA
TTTCCCAAGATCATATCAATACCATCTACGTGTCAACGACTAATGGGCTACATGATGGCG
AAGTCGGAAGGTCATGGAGTGGACTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCC
GAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAA
CGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCAAACAAACTGGGCATAGAT
ATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAATTACTACTGGGGTTCT
GTTGAAGATGAAGATGCTTTCGATATGAGGAAAGCACTTTCAGCAGATGTGCTTAAACGA
TCTGTTATACCAATGACGAGGCCGATACGTCCAGAAGAGTTAGAACATCCATGAACATAC
AAATGAAACTTGGTTCTACAGTGTGGCTTTATATGTAACGTTAATCAGTGGTTCTAAGTA
CTTGTAAATGTATATTTTGTAACCAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAA
AAAANNNNNAAAAAAAAAAAAAAA

consensusID : consensus_10300#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 562
fasta sequence

                              [GTGCCTGCTCCAAGACACATACTT-TTGTAATT-GGATC-GGAGAGAAAATTGACTGCATTATGGTAACCGTGAGGCCGTTTACTTGCTTAGACTTGTTGAAGTTTGGAAATATTAATCTGGATATATATACGGAAACTTATAGTATCGGATTTTATCTGCATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGTTTTGAAAGGAATTCGACACGTCTTTCGGATATTCCACACACAGGTGATGCACAAAACCCATTTCCCAAGATCATATCAATACCATCTACGTGTCAACGACTAATGGGCTACATGATGGCGAAGTCGGAAGGTCATGGAGTGGACTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCCGAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCANACANACTGGGCATAGATATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAAA]

[+] EMBL CD147999             [GTGCCTGCTCCAAGACACATACTT TTGTAATT GGATC GGAGAGAAAATTGACTGCATTATGGTAACCGTGAGGCCGTTTACTTGCTTAGACTTGTTGAAGTTTGGAAATATTAATCTGGATATATATACGGAAACTTATAGTATCGGATTTTATCTGCATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGTTTTGAAAGGAATTCGACACGTCTTTCGGATATTCCACACACAGGTGATGCACAA                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD187447             [GTGCCTGCTCCAAGACACATACTT TTGTAATT GGATC GGAGAGAAAATTGACTGCATTATGGTAACCGTGAGGCCGTTTACTTGCTTAGACTTGTTGAAGTTTGGAAATATTAATCTGGATATATATACGGAAACTTATAGTATCGGATTTTATCTGCATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGTTTTGAAAGGAATTCGACACGTCTTTCGGAT                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD186891             [ TGCCTGCTCCAAGACACATACTT TTGTAATT GGATC GGAGAGAAAATTGACTGCATTATGGTAACCGTGAGGCCGTTTACTTGCTTAGACTTGTTGAAGTTTGGAAATATTAATCTGGATATATATACGGAAACTTATAGTATCGGATTTTATCTGCATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGTTTTGAAAGGAATTCGACACGTCTTTCGGATA                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AI977659             [           AAGACACATACTT TTGTAATT GGATC GGAGAGAAAATTGACTGCATTATGGTAACCGTGAGGCCGTTTACTTGCTTAGACTTGTTGAAGTTTGGAAATATTAATCTGGATATATATACGGAAACTTATAGTATCGGATTTTATCTGCATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGTTTTGAAAGGAATTCGACACGTCTTTCGGATATTCCACACACAGGTGATGCACAAAACCCATTTCCCAAGATCATATCAATACCATCTACGTGTCAACGACTAATGGGCTACATGATGGCGAAGTCGGAAGGTCATGGAGTGGACTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCCGAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCANACANACTGGGCATAGATATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAAA]
[+] EMBL AI977130             [           AAGACACATACTT TTGTAATT GGATC GGAGAGAAAATTGACTGCATTATGGTAACCGTGAGGCCGATTACTTGCTTAGACTTGTTGAAGTTTGGAAATATTAATCTGGATATATATACGGAAACTTATAGTATCGGATTTTATCTGCATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGTTTTGAAAGGAATTCGACACGTCTTTCGGATATTTCACACACAGGTGATGCACAAAACCCATTTCCCAAGATCATATCAATACCATCTACGTGTCAACGACTAATGGGCTACATGATGGCGAAGTCCGAAGGTCATGTAGTGGACTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCCGAATATCGTCGTTTGAGAg                                                                                                                                                  ]
[+] EMBL CD148994             [             GACACATACTTATTGTAATTCGTAGCGGGAGAGAAAATTGACTGCATTATGGTAACCGTGAGGCCGTTTACTTGCTTAGACTTGATGAAGTTTGGAAATATTAATCTGGATATATATACGGAAACTTATATTCTCCGATTTTATCTGCATTA                                                                                                                                                                                                                                                                                                                                                                                                                ]




>consensus_10300#1
GTGCCTGCTCCAAGACACATACTTTTGTAATTGGATCGGAGAGAAAATTGACTGCATTAT
GGTAACCGTGAGGCCGTTTACTTGCTTAGACTTGTTGAAGTTTGGAAATATTAATCTGGA
TATATATACGGAAACTTATAGTATCGGATTTTATCTGCATTATTTGGCAAAATGGCCAGA
GTATATGCGAGTCCTAGAGTCACCCACACTAACCTGTTTTGAAAGGAATTCGACACGTCT
TTCGGATATTCCACACACAGGTGATGCACAAAACCCATTTCCCAAGATCATATCAATACC
ATCTACGTGTCAACGACTAATGGGCTACATGATGGCGAAGTCGGAAGGTCATGGAGTGGA
CTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCCGAATATCGTCGTTTGAGATTAGC
TACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTACTATGTCGA
CCTATTCGTACGTGCATCANACANACTGGGCATAGATATTTATAGTAAATTGGGGTATAT
TATATATCGCAGAGTCTTAAAA

consensusID : consensus_10300#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 310
fasta sequence

                              [ATATATGGTATTGTGATGGGTGGGGGGTCCCGAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCAAACAAACTGGGCATAGATATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAATTACTACTGGGGTTCTGTTGAAGATGAAGATGCTTTCGATATGAGGAAAGCACTTTCAGCAGATGTGCTTAAACGATCTGTTATACCAATGACGAGGCCGATACGTCCAGAAGAC]

[-] EMBL BG931003             [ATATATGGTATTGTGATGGGTGGGGGGTCCCGAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCAAACAAACTGGGCATAGATATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAATTACTACTGGGGTTCTGTTGAAGATGAAGATGCTTTCGATATGAGGAAAGCACTTTCAGCAGATGTGCTTAAACGATCTGTTATACCAATGACGAGGCCGATACGTCCAGAAGAC]




>consensus_10300#2
ATATATGGTATTGTGATGGGTGGGGGGTCCCGAATATCGTCGTTTGAGATTAGCTACTCA
ACTAATGTTAGAGTTAGAAGAAACTTCCGAACGGAAACGATGTTACTATGTCGACCTATT
CGTACGTGCATCAAACAAACTGGGCATAGATATTTATAGTAAATTGGGGTATATTATATA
TCGCAGAGTCTTAAATTACTACTGGGGTTCTGTTGAAGATGAAGATGCTTTCGATATGAG
GAAAGCACTTTCAGCAGATGTGCTTAAACGATCTGTTATACCAATGACGAGGCCGATACG
TCCAGAAGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10300#0      AGGCCATTAATTCGGCACGAGGGATTACAAATATATTATTTATTGTTTACTAATGATTTT 60
consensus_10300#2      ------------------------------------------------------------
consensus_10300#1      ------------------------------------------------------------
                                                                                   

consensus_10300#0      TAATATGTACTTCGTGTCCAGTAGGTGGTAAGCAAACGAACTATGAATACTAGTTTTTCC 120
consensus_10300#2      ------------------------------------------------------------
consensus_10300#1      -----------------------GTGCCTGCTCCAAGACACATACTTTTGTAATTGGATC 37
                                                                                   

consensus_10300#0      TCTAAGTTTTAGATTATTTAGAATATGCTCGATAGACCATTATGAAATTGTACTTTCTTT 180
consensus_10300#2      ------------------------------------------------------------
consensus_10300#1      GGAGAGAAAATTGACTGCATTATGGTAACCGTGAGGCCGTTTACTTGCTTAGACTTGTTG 97
                                                                                   

consensus_10300#0      GACTTGGTGGTACTGTTACACTGTTAATGGCAATAAAAGTATAGTATCGGATTTTATCTG 240
consensus_10300#2      ------------------------------------------------------------
consensus_10300#1      AAGTTTGGAAATATTAATCTGGATATATATACGGAAACTTATAGTATCGGATTTTATCTG 157
                                                                                   

consensus_10300#0      CATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGT 300
consensus_10300#2      ------------------------------------------------------------
consensus_10300#1      CATTATTTGGCAAAATGGCCAGAGTATATGCGAGTCCTAGAGTCACCCACACTAACCTGT 217
                                                                                   

consensus_10300#0      TTTGAAAGGAATTCGACACGTCTTTCGGATATTCCACACACAGGTGATGCACAAAACCCA 360
consensus_10300#2      ------------------------------------------------------------
consensus_10300#1      TTTGAAAGGAATTCGACACGTCTTTCGGATATTCCACACACAGGTGATGCACAAAACCCA 277
                                                                                   

consensus_10300#0      TTTCCCAAGATCATATCAATACCATCTACGTGTCAACGACTAATGGGCTACATGATGGCG 420
consensus_10300#2      ------------------------------------------------------------
consensus_10300#1      TTTCCCAAGATCATATCAATACCATCTACGTGTCAACGACTAATGGGCTACATGATGGCG 337
                                                                                   

consensus_10300#0      AAGTCGGAAGGTCATGGAGTGGACTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCC 480
consensus_10300#2      ------------------------ATATATGGTATTGTGATGGG-----TGGGGGGTCCC 31
consensus_10300#1      AAGTCGGAAGGTCATGGAGTGGACTGGCATGGTCATGTCACAGCGCTGTCAGTGGCTCCC 397
                                                   *****  *** *  *        * ** ****

consensus_10300#0      GAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAA 540
consensus_10300#2      GAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAA 91
consensus_10300#1      GAATATCGTCGTTTGAGATTAGCTACTCAACTAATGTTAGAGTTAGAAGAAACTTCCGAA 457
                       ************************************************************

consensus_10300#0      CGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCAAACAAACTGGGCATAGAT 600
consensus_10300#2      CGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCAAACAAACTGGGCATAGAT 151
consensus_10300#1      CGGAAACGATGTTACTATGTCGACCTATTCGTACGTGCATCANACANACTGGGCATAGAT 517
                       ****************************************** *** *************

consensus_10300#0      ATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAATTACTACTGGGGTTCT 660
consensus_10300#2      ATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAATTACTACTGGGGTTCT 211
consensus_10300#1      ATTTATAGTAAATTGGGGTATATTATATATCGCAGAGTCTTAAAA--------------- 562
                       ********************************************                

consensus_10300#0      GTTGAAGATGAAGATGCTTTCGATATGAGGAAAGCACTTTCAGCAGATGTGCTTAAACGA 720
consensus_10300#2      GTTGAAGATGAAGATGCTTTCGATATGAGGAAAGCACTTTCAGCAGATGTGCTTAAACGA 271
consensus_10300#1      ------------------------------------------------------------
                                                                                   

consensus_10300#0      TCTGTTATACCAATGACGAGGCCGATACGTCCAGAAGAGTTAGAACATCCATGAACATAC 780
consensus_10300#2      TCTGTTATACCAATGACGAGGCCGATACGTCCAGAAGAC--------------------- 310
consensus_10300#1      ------------------------------------------------------------
                                                                                   

consensus_10300#0      AAATGAAACTTGGTTCTACAGTGTGGCTTTATATGTAACGTTAATCAGTGGTTCTAAGTA 840
consensus_10300#2      ------------------------------------------------------------
consensus_10300#1      ------------------------------------------------------------
                                                                                   

consensus_10300#0      CTTGTAAATGTATATTTTGTAACCAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAA 900
consensus_10300#2      ------------------------------------------------------------
consensus_10300#1      ------------------------------------------------------------
                                                                                   

consensus_10300#0      AAAANNNNNAAAAAAAAAAAAAAA 924
consensus_10300#2      ------------------------
consensus_10300#1      ------------------------