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Schistosoma mansoni
cluster # 10308 cluster # 10308       Sequences # 15       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10308#0 length = 1215 sequences # 10  
consensus_10308#1 length = 583 sequences # 3  
consensus_10308#2 length = 427 sequences # 1  
consensus_10308#3 length = 322 sequences # 1  

consensusID : consensus_10308#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1215
fasta sequence
                              [TCGGGCCAANATTCGGCACGAGGTTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCACAGCTGCTTGTTTTGATATCTTATCTGTTAAAATATTTGTGAGGTTCTCCTCAAACTGTTCCGAGCTTCGTTTCAAAGGGCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAGCACAGTTGACCTGAGGTGTTCACAGCTGACAATCACTAACCATATCGTGTCTGCCAAGACAATATCTGACATACCATGAGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATTGAAGATTCTCATGCTGGGGATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGAGTGATTGACGTTGGGTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATG-GG-GGTGATCTCTCAACTATGATCAGTGGTCCATCACCTTCTGACTCGCGACAACTTGATGAGCATGGGAAGCCAATGTACCGGAACCGTCGCAATATCTCTGCACCTGATAGGGTACTTTTGAGTGCGTTCAGAGAAATCAGTCAAATGGGTGAACATCTAAATCTCCCCAAAAGCATATCTGACCATGCTAACTTGCTGTTCAAACAAGTCCATGAGACTAAAAATCTTCGAGGTCGCAGTAATGATGCTGTCTCAACTGCTTGCCTCTACATGGCCTGCCGTCAAGAGGGTGTCCCTCGGACTTTCAAAGAAGTATGCGCTGTGTCACGAGTTTCAAAGAAGGAAATAGGAAAAGTTTTTAAAAAGATTCTAAAAATACTTGAAACAAATGTACAATCAGTTACAGTTGAAGACTTCATGTCTAGATTCTGTGGTAATCTCAATTTGAATATTGCTGTTCAAAGAGTTGCAAATGTGGTTGCTAGAAGAGCTCTCAACTTAAATTTAGTTGCTGGTCGTAGCCCAGTTTCGGTGGCAGCCGCAGCCATTTACATGGCAGCTTATGCATTAGGTTATCGTAAAGAAAAACGAGAAATCGGTGATGTGGCGGGATGTGCTGAGGCTACTATCACATGTACTTATCGTGCAATGCACTCAAGAGCCAGTGAACTATTTCCTGAAGATGTCAGACTTGCCATAAGACCAGATGAATTACCACTATGATTTCACTTATTTTTCTTGTTTAAAGAAAATTTA]

[+] EMBL CD080325             [TCGGGCCAANATTCGGCACGAGGTTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCACAGCTGCTTGTTTTGATATCTTATCTGTTAAAATATTTGTGAGGTTCTCCTCAAACTGTTCCGAGCTTCGTTTCAAAGGGCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAGCACAGTTGACCTGAGGTGTTCACAGCTGACAATCACTAACCATATCGTGTCTGCCAAGACAATATCTGACATACCATGAGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATTGAAGATTCTCATGCTGGGGATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGAGTGATTGACGTTGGGTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATGNGG GGTGATCTCTCAACTATGATCAGTGGTCCATCACCTTCTGACTCGCGACAACTTGATGAGCATGGGAAGCCAATGTACCGGAACCGTCGCAATATCTCTGCACCTGATAGGGTACTTTTGAGTGCGTTCAGAGAAATCAGTCAAATGGGTGAACATCTAAATCTCCCC AAAGCATATCTGACCATGCTAACTTGCTGTTCAAACAAGTCCATGAGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD080336             [      CAAGATTCGGCACGAGGTTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCACAGCTGCTTGTTTTGATATCTTATCTGTTAAAATATTTGTGAGGTTCTCCTCAAACTGTTCCGAGCTTCGTTTCAAAGGGCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAGCACAGTTGACCTGAGGTGTTCACAGCTGACAATCACTAACCATATCGTGTCTGCCAAGACAATATCTGACATACCATGAGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATTGAAGATTCTCATGCTGGGGATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGAGTGATTGACGTTGGGTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATG GGCGGTGATCTCTCAACTATGATCAGTGGTCCATCACCTTCTGACTCGCGACAACTTGATGAGCATGGGAAGCCAATGTACCGGAACCGTCGCAATATCTCTGCACCTGATAGGGTACTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD178477             [                tttatccTTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCACAGCTGCTTGTTTTGATATCTTATCTGTTAAAATATTTGTGAGGTTCTCCTCAAACTGTTCCGAGCTTCGTTTCAAAGGGCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAGCACAGTTGACCTGAGGTGTTCACAGCTGACAATCACTAACCATATCGTGTCTGCCAAGACAGTATCTGACATACCATGAGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATTGAAGATTCTCATGCTGGGGGTATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGAGTGATTGACGTTGGGTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATG GG GGTGATCTCTCAACTATGATCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD165786             [                                                                                                                                                                        TTCTAGTTGAAGCACAGTTGACCTGAGGTGTTCACAGCTGACAATCACTAACCATATCGTGTCTGCCAAGACAATATCTGACATACCATGAGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATTGAAGATTCTCATGCTGGGGATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGAGTGATTGACGTTGGGTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATG GG GGTGATCTCTCAACTATGATCAGTGGTCCATCACCTTCTGACTCGCGACAACTTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BG930398             [                                                                                                                                                                                                                                                                                                                                                                                 gcgGGGTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATG GG GGTGATCTCTCAACTATGATCAGTGGTCCATCACCTTCTGACTCGCGACAACTTGATGAGCATGGGAAGCCAATGTACCGGAACCGTCGCAATATCTCTGCACCTGATAGGGTACTTTTGAGTGCGTTCAGAGAAATCAGTCAAATGGGTGAACATCTAAATCTCCCCAAAAGCATATCTGACCATGCTAACTTGCTGTTCAAACAAGTCCATGAGACTAAAAATCTTCGAGGTCGCAGTAATGATGCTGTCTCAACTGCTTGCCTCTACATGAACCCCCGTCcatcac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD074245             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTGATAGGGTACTTTTGAGTGCGTTCAGAGAAATCAGTCAAATGGGTGAACATCTAATTCTCCCCAAAAGCATATCTGACCATGCTAACTTGCTGTTCAAACAAGTCCATGAGACTAAAAATCTTCGAGGTCGCAGTAATGATGCTGTCTCAACTGCTTGCCTCTACATGGCCTGCCGTCAAGAGGGTGTCCCTCGGACTTTCAAAGAAGTATGCGCTGTGTCACGAGTTTCAAAGAAGGAAATAGGAAAAGTTTTTAAAAAGATTCTAAAAATACTTGAAACAAATGTACAATCAGTTACAGTTGAAGACTTCATGTCTAGATTCTGTGGTAATCTCAATTTGAATATTGCTGTTCAAAGAGTTGCAAATGTGGTTGCTAGAAGAGCTCTCAACTTAAATTTAGTTGCTGGTCGTAGCCCAGTTTCGGTGGCAGCCGCAGCCATTTACATGGCAGCTTATGCATTAGGTTATCGTAAAGAAAAACGAGAAATCGGTGATGTGGCGGGATGTGCTGAGGCTACTATCACATGTACTTATCGTGCAATGCACTCAAGAGCCAGTGAACTATTTCCTGAAGATGTCAGACTTGCCATAAGACCAGATGAATTACCACTATGATTTCACTTATTTTTCTTGTTTAAAGAAAATTTA]
[-] EMBL BG930872             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AATCAGTCAAATGGGTGAACATCTAAATCTCCCCAAAAGCATATCTGACCATGCTAACTTGCTGTTCAAACAAGTCCATGAGACTAAAAATCTTCGAGGTCGCAGTAATGATGCTGTCTCAACTGCTTGCCTTTACATGag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD144863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCATGCTAACTTGCTGTTCAAACAAGTCCATGAGACTAAAAATCCTCGAGGTCGCAGTAATGATGCTGTCTCAACTGCTTGCCTCTACATGGCCTGCCGTCAAGAGGGTGTCCCTCGGACTTTCAAAGAAGTATGCGCTGTGTCACGAGTTTCAAAGAAGGAAATAGGAAAAGTTTTTAAAAAGATTCTAAAAATACTTGAAACAAATGTACAATCAGTTACAGTTGAAGACTTCATGTCTAGATTCTGTGGTAATCTCAATTTGAATATTGCTGTTCAAAGAGTTGCAAATGTGGTTGCTAGAAGAGCTCTCAACTTAAATTTAGTTGCTGGTCGTAGCCCAGTTTCGGTGGCAGCCGCAGCCATTTACATGGCAGCTTATGCATTAGGTTATCGTAAAGAAAAACGAGAAATCGGTGATGTGGCGGGATGTGCTGAGGCTACTATCACATGTACT                                                                                                                     ]
[-] EMBL CD144850             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCTAACTTGCTGTTCAAACAAGTCCATGAGACTAAAAATCTTCGAGGTCGCAGTAATGATGCTGCCTCAACTGCTTGCCTCTACATGGCCTGCCGTCAAGAGGGTGTCCCTCGGACTTTCGAAGAAGTATGCGCTGTGTCACGAGTTTCAAAGAAGGAAATAGGAAAAGTTTTTAAAAAGATTCTAAANATACTTGAAACAAATGTACAATCAGTTACAGTTGAAGACTTCATGTCTAGATTCTGTGGTAATCTCAATTTGAATATTGCTGTTCAAAGAGTTGCAAATGTGGTTGCTAGAAGAGCTCTCAACTTAAATTTAGTTGCTGGTCGTAGCCCAGTTTCGGTGGCAGCCGCAGCCATTTACATGGCAGCTTATGCATTAGGTTATCGTAAAGAAAAACGAGAAATCGGTGATGTGGCGGGATGTGCTGAGGCTACTATCACATGTACT                                                                                                                     ]
[+] EMBL CD132402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATCGTAAAGAAAAACGAGAAATCGGTGATGTGGCGGGATGTGCTGAGGCTACTATCACATGTACTTACCGTGCAATGCACTCAAGAGCCAGTGAACTATTTCCTGAAGATGTCAGACT                                                                ]


>consensus_10308#0 TCGGGCCAANATTCGGCACGAGGTTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCAC AGCTGCTTGTTTTGATATCTTATCTGTTAAAATATTTGTGAGGTTCTCCTCAAACTGTTC CGAGCTTCGTTTCAAAGGGCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAG CACAGTTGACCTGAGGTGTTCACAGCTGACAATCACTAACCATATCGTGTCTGCCAAGAC AATATCTGACATACCATGAGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATT GAAGATTCTCATGCTGGGGATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGA GTGATTGACGTTGGGTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATG TGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATGGGGGTGATCTCTCAACTATGATC AGTGGTCCATCACCTTCTGACTCGCGACAACTTGATGAGCATGGGAAGCCAATGTACCGG AACCGTCGCAATATCTCTGCACCTGATAGGGTACTTTTGAGTGCGTTCAGAGAAATCAGT CAAATGGGTGAACATCTAAATCTCCCCAAAAGCATATCTGACCATGCTAACTTGCTGTTC AAACAAGTCCATGAGACTAAAAATCTTCGAGGTCGCAGTAATGATGCTGTCTCAACTGCT TGCCTCTACATGGCCTGCCGTCAAGAGGGTGTCCCTCGGACTTTCAAAGAAGTATGCGCT GTGTCACGAGTTTCAAAGAAGGAAATAGGAAAAGTTTTTAAAAAGATTCTAAAAATACTT GAAACAAATGTACAATCAGTTACAGTTGAAGACTTCATGTCTAGATTCTGTGGTAATCTC AATTTGAATATTGCTGTTCAAAGAGTTGCAAATGTGGTTGCTAGAAGAGCTCTCAACTTA AATTTAGTTGCTGGTCGTAGCCCAGTTTCGGTGGCAGCCGCAGCCATTTACATGGCAGCT TATGCATTAGGTTATCGTAAAGAAAAACGAGAAATCGGTGATGTGGCGGGATGTGCTGAG GCTACTATCACATGTACTTATCGTGCAATGCACTCAAGAGCCAGTGAACTATTTCCTGAA GATGTCAGACTTGCCATAAGACCAGATGAATTACCACTATGATTTCACTTATTTTTCTTG TTTAAAGAAAATTTA



consensusID : consensus_10308#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 583
fasta sequence
                              [TTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCACAGCTGCTTGTTTTGATATCTTATCTGTTAAAATATTTGTGAGGTTCTCCTCAAACTGTTCCGAGCTTCGTTTCAAAGGGCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAGCACAGTTGACCTGAGGTGTTCACAGCTGACAATCACTAACCATATCGTGTCTGCCAAGACAATATCTGACATACCATGTAAACGCTACAGAGTTTAATAAACTTTCTCATTCCTAAAGGAGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATTGAAGATTCTCATGCTGGGGATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGAGTGATTGACGTTGGGTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATGGGGGTGATCTCTCAACTATGATCAGTGGTCCATCACCTTCTGACTCGCGACAACTTGATGAGCATGGGAAGCCAATGTACCGGAACCGTCGTCAATCACTATACCATA]

[+] EMBL AI977398             [TTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCACAGCTGCTTGTTTTGATATCTTATCTGTTAAAATATTTGTGAGGTTCTCCTCAAACTGTTCCGAGCTTCGTTTCAAAGGGCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAGCACAGTTGACCTGAGGTGTTCACAGCTGACAATCACTAACCATATCGTGTCTGCCAAGACAATATCTGACATACCATGTAAACGCTACAGAGTTTAATAAACTTTCTCATTCCTAAAGGAGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATTGAAGATTCTCATGCTGGGGATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGAGTGATTGACGTTGGGTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATGGGGGTGATCTCTCAACTATGATCAGTGGTCCATCACCTTCTGACTCGCGACAACTTGATGAGCATGGGAAGCCAATGTACCGGAACCGT                   ]
[+] EMBL BG930865             [                                                                                                                                                                                                                                                                                                                                                                                                        GTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATGGGGGTGATCTCTCAACTATGATCAGTGGTCCATCACCTTCTGACTCGCGACAACTTGATGAGCATGGGAAGCCAATGTACCGGA                        ]
[-] EMBL BG930892             [                                                                                                                                                                                                                                                                                                                                                                                                         tgTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATGGGGGTGATCTCTCAACTATGATCAGTGGTCCATCACCTTATGACTCGCGACCACTTGATGAGCATGGGAAGCCAATGTACCGGACCCACCGTCAATCACTATACCATA]


>consensus_10308#1 TTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCACAGCTGCTTGTTTTGATATCTTAT CTGTTAAAATATTTGTGAGGTTCTCCTCAAACTGTTCCGAGCTTCGTTTCAAAGGGCAGT GCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAGCACAGTTGACCTGAGGTGTTCAC AGCTGACAATCACTAACCATATCGTGTCTGCCAAGACAATATCTGACATACCATGTAAAC GCTACAGAGTTTAATAAACTTTCTCATTCCTAAAGGAGTCATCTAGAGTGTAAGTATCAT CCATATGCAGTTCTTATTGAAGATTCTCATGCTGGGGATATGGTTTGCTCGATGTGTGGA TTGGTTGTTGCTGATAGAGTGATTGACGTTGGGTCTGAATGGCGCACATTTTCTAATGAT GCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATGGGGGT GATCTCTCAACTATGATCAGTGGTCCATCACCTTCTGACTCGCGACAACTTGATGAGCAT GGGAAGCCAATGTACCGGAACCGTCGTCAATCACTATACCATA



consensusID : consensus_10308#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 427
fasta sequence
                              [TTATCCTTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCACAGCTGCTTGTTTTGATATCTTATCTGTTAAAATATTTGGCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAGCACAGTTGACCTGAGGTGTTCACAGCTGACAATCACTAACCATATCGTGTCTGCCAAGACAATATCTGACATACCATGAGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATTGAAGATTCTCATGCTGGGGATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGAGTGATTGACGCTGGGTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATGGGGGTGATCTCTCAACTATGATCAGTG]

[+] EMBL CD178394             [TTATCCTTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCACAGCTGCTTGTTTTGATATCTTATCTGTTAAAATATTTGGCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAGCACAGTTGACCTGAGGTGTTCACAGCTGACAATCACTAACCATATCGTGTCTGCCAAGACAATATCTGACATACCATGAGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATTGAAGATTCTCATGCTGGGGATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGAGTGATTGACGCTGGGTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGATATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATGGGGGTGATCTCTCAACTATGATCAGTG]


>consensus_10308#2 TTATCCTTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCACAGCTGCTTGTTTTGATA TCTTATCTGTTAAAATATTTGGCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTG AAGCACAGTTGACCTGAGGTGTTCACAGCTGACAATCACTAACCATATCGTGTCTGCCAA GACAATATCTGACATACCATGAGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTT ATTGAAGATTCTCATGCTGGGGATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGAT AGAGTGATTGACGCTGGGTCTGAATGGCGCACATTTTCTAATGATGCCAACGCCAAAGAT ATGTGTCGAGTAGGAGCTACTGAAAACTTCTTGCTAGATGGGGGTGATCTCTCAACTATG ATCAGTG



consensusID : consensus_10308#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 322
fasta sequence
                              [TCAATTATTATCTGTTAGTAAACAATGTGATAATTTTCTTTGTAGAAATCGGTGATGTGGCGGGATGTGCTGAGGCTACTATCACATGTACTTATCGTGCAATGCACTCAAGAGCCAGTGAACTATTTCCTGAAGATGTCAGACTTGCCATAAGACCAGATGAATTACCACTATGATTTCACTTATTTTTCTTGTTTAAAGAAAATTTATTTCCTTTCAAAGTTGATCAGTTTTTGTACAAAGTTATGATACTGTAAATGCAAAATACCAAAGTTAGTCATTGGTTATTTGAGACTTGGAATATTGTGTGTAACAGATGGTA]

[+] EMBL CD199970             [TCAATTATTATCTGTTAGTAAACAATGTGATAATTTTCTTTGTAGAAATCGGTGATGTGGCGGGATGTGCTGAGGCTACTATCACATGTACTTATCGTGCAATGCACTCAAGAGCCAGTGAACTATTTCCTGAAGATGTCAGACTTGCCATAAGACCAGATGAATTACCACTATGATTTCACTTATTTTTCTTGTTTAAAGAAAATTTATTTCCTTTCAAAGTTGATCAGTTTTTGTACAAAGTTATGATACTGTAAATGCAAAATACCAAAGTTAGTCATTGGTTATTTGAGACTTGGAATATTGTGTGTAACAGATGGTA]


>consensus_10308#3 TCAATTATTATCTGTTAGTAAACAATGTGATAATTTTCTTTGTAGAAATCGGTGATGTGG CGGGATGTGCTGAGGCTACTATCACATGTACTTATCGTGCAATGCACTCAAGAGCCAGTG AACTATTTCCTGAAGATGTCAGACTTGCCATAAGACCAGATGAATTACCACTATGATTTC ACTTATTTTTCTTGTTTAAAGAAAATTTATTTCCTTTCAAAGTTGATCAGTTTTTGTACA AAGTTATGATACTGTAAATGCAAAATACCAAAGTTAGTCATTGGTTATTTGAGACTTGGA ATATTGTGTGTAACAGATGGTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10308#1      -----------------------TTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCAC 37
consensus_10308#2      -----------------TTATCCTTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCAC 43
consensus_10308#0      TCGGGCCAANATTCGGCACGAGGTTTAAACCAACCTGTTCATTAAGCAGCTGGCCTTCAC 60
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      AGCTGCTTGTTTTGATATCTTATCTGTTAAAATATTTGTGAGGTTCTCCTCAAACTGTTC 97
consensus_10308#2      AGCTGCTTGTTTTGATATCTTATCTGTTAAAATATTTG---------------------- 81
consensus_10308#0      AGCTGCTTGTTTTGATATCTTATCTGTTAAAATATTTGTGAGGTTCTCCTCAAACTGTTC 120
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      CGAGCTTCGTTTCAAAGGGCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAG 157
consensus_10308#2      ------------------GCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAG 123
consensus_10308#0      CGAGCTTCGTTTCAAAGGGCAGTGCGAAGTTATTTAGTTGCCAAAGGTTTCTAGTTGAAG 180
consensus_10308#3      -----------TCAATTATTATCTGTTAGTAAACAATGTGATAATTTTCTTTGTAGAAAT 49
                                           *      *** *   *  **  **   * * *     ** 

consensus_10308#1      CACAGTTGACCTGAGGTGTTCACAGCTGACAATCAC-TAACCATATCGTGTCTGCCAAGA 216
consensus_10308#2      CACAGTTGACCTGAGGTGTTCACAGCTGACAATCAC-TAACCATATCGTGTCTGCCAAGA 182
consensus_10308#0      CACAGTTGACCTGAGGTGTTCACAGCTGACAATCAC-TAACCATATCGTGTCTGCCAAGA 239
consensus_10308#3      CGGTGATGTGGCGGGATGTGCTGAGGCTACTATCACATGTACTTATCGTG-CAATGCACT 108
                       *   * **    * * *** *  **   ** ***** *   * ******* *     *  

consensus_10308#1      CAATATCTGACATACCATGTAAACGCTACAGAGTTTAATAAACTTTCTCATTCCTAAAGG 276
consensus_10308#2      CAATATCTGACATACCATG----------------------------------------- 201
consensus_10308#0      CAATATCTGACATACCATG----------------------------------------- 258
consensus_10308#3      CAAGAGCCAGTGAACTAT------------------------------------------ 126
                       *** * *      ** **                                          

consensus_10308#1      AGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATTGAAGATTCTCATGCTGGG 336
consensus_10308#2      AGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATTGAAGATTCTCATGCTGGG 261
consensus_10308#0      AGTCATCTAGAGTGTAAGTATCATCCATATGCAGTTCTTATTGAAGATTCTCATGCTGGG 318
consensus_10308#3      --TTCCTGAAGATGTCAG-ACTTGCCATAAGACCAGATGAATTACCACTATGATTTCACT 183
                         *     *   *** ** *    ***** *      * * * *  * * * **      

consensus_10308#1      GATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGAGTGATTGACGTTGGGTCT 396
consensus_10308#2      GATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGAGTGATTGACGCTGGGTCT 321
consensus_10308#0      GATATGGTTTGCTCGATGTGTGGATTGGTTGTTGCTGATAGAGTGATTGACGTTGGGTCT 378
consensus_10308#3      TATTTTTCTTGTTTAAAGAA--AATTTATTTCCTTTCAAAGT-TGATCAGTTTTTGTACA 240
                        ** *   *** *  * *     ***  **     * * **  ****      * *  * 

consensus_10308#1      GAATGGCGCACATTTTCTAATGATGCCAA-CGCCAAAGATATGTGTCGAGTAGGAGCTAC 455
consensus_10308#2      GAATGGCGCACATTTTCTAATGATGCCAA-CGCCAAAGATATGTGTCGAGTAGGAGCTAC 380
consensus_10308#0      GAATGGCGCACATTTTCTAATGATGCCAA-CGCCAAAGATATGTGTCGAGTAGGAGCTAC 437
consensus_10308#3      AAGTTATG---ATACTGTAA--ATGCAAAATACCAAAGTTAGTCATTGGTTATTTGAGAC 295
                        * *   *   **  * ***  **** **   ****** **    * *  **   *  **

consensus_10308#1      TGAAAACTTCTTGCTAGATGGGGGTGATCTCTCAACTATGATCAGTGGTCCATCACCTTC 515
consensus_10308#2      TGAAAACTTCTTGCTAGATGGGGGTGATCTCTCAACTATGATCAGTG------------- 427
consensus_10308#0      TGAAAACTTCTTGCTAGATGGGGGTGATCTCTCAACTATGATCAGTGGTCCATCACCTTC 497
consensus_10308#3      TTGGAATATTGTGTGTAACAGATGGTA--------------------------------- 322
                       *   **  *  **    *  *  *  *                                 

consensus_10308#1      TGACTCGCGACAACTTGATGAGCATGGGAAGCCAATGTACCGGAACCGTCGTCA-ATCAC 574
consensus_10308#2      ------------------------------------------------------------
consensus_10308#0      TGACTCGCGACAACTTGATGAGCATGGGAAGCCAATGTACCGGAACCGTCGCAATATCTC 557
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      TATACCATA--------------------------------------------------- 583
consensus_10308#2      ------------------------------------------------------------
consensus_10308#0      TGCACCTGATAGGGTACTTTTGAGTGCGTTCAGAGAAATCAGTCAAATGGGTGAACATCT 617
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      ------------------------------------------------------------
consensus_10308#2      ------------------------------------------------------------
consensus_10308#0      AAATCTCCCCAAAAGCATATCTGACCATGCTAACTTGCTGTTCAAACAAGTCCATGAGAC 677
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      ------------------------------------------------------------
consensus_10308#2      ------------------------------------------------------------
consensus_10308#0      TAAAAATCTTCGAGGTCGCAGTAATGATGCTGTCTCAACTGCTTGCCTCTACATGGCCTG 737
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      ------------------------------------------------------------
consensus_10308#2      ------------------------------------------------------------
consensus_10308#0      CCGTCAAGAGGGTGTCCCTCGGACTTTCAAAGAAGTATGCGCTGTGTCACGAGTTTCAAA 797
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      ------------------------------------------------------------
consensus_10308#2      ------------------------------------------------------------
consensus_10308#0      GAAGGAAATAGGAAAAGTTTTTAAAAAGATTCTAAAAATACTTGAAACAAATGTACAATC 857
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      ------------------------------------------------------------
consensus_10308#2      ------------------------------------------------------------
consensus_10308#0      AGTTACAGTTGAAGACTTCATGTCTAGATTCTGTGGTAATCTCAATTTGAATATTGCTGT 917
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      ------------------------------------------------------------
consensus_10308#2      ------------------------------------------------------------
consensus_10308#0      TCAAAGAGTTGCAAATGTGGTTGCTAGAAGAGCTCTCAACTTAAATTTAGTTGCTGGTCG 977
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      ------------------------------------------------------------
consensus_10308#2      ------------------------------------------------------------
consensus_10308#0      TAGCCCAGTTTCGGTGGCAGCCGCAGCCATTTACATGGCAGCTTATGCATTAGGTTATCG 1037
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      ------------------------------------------------------------
consensus_10308#2      ------------------------------------------------------------
consensus_10308#0      TAAAGAAAAACGAGAAATCGGTGATGTGGCGGGATGTGCTGAGGCTACTATCACATGTAC 1097
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      ------------------------------------------------------------
consensus_10308#2      ------------------------------------------------------------
consensus_10308#0      TTATCGTGCAATGCACTCAAGAGCCAGTGAACTATTTCCTGAAGATGTCAGACTTGCCAT 1157
consensus_10308#3      ------------------------------------------------------------
                                                                                   

consensus_10308#1      ----------------------------------------------------------
consensus_10308#2      ----------------------------------------------------------
consensus_10308#0      AAGACCAGATGAATTACCACTATGATTTCACTTATTTTTCTTGTTTAAAGAAAATTTA 1215
consensus_10308#3      ----------------------------------------------------------
                                                                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)