cluster # 10309

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Schistosoma mansoni
cluster # 10309 cluster # 10309 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10309#0 length = 667 sequences # 6
consensus_10309#1 length = 588 sequences # 3

consensus_10309#2 length = 570 sequences # 1
consensus_10309#3 length = 513 sequences # 1
consensus_10309#4 length = 453 sequences # 4

consensusID : consensus_10309#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 667
fasta sequence

                              [TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTAAGNAATGTTATTCA-TGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATATCGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACTTGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTATACTGCGG-AGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATG-CTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATATATTT-CTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAGATCTCTCATATTCACTGAGTTTGACGAGTAGCACTGCTATCCGTTTCAGCGACCTTG]

[+] EMBL AW017268             [TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTAAGNAATGTTATTCA TGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATATCGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACTTGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTATACTGCGG AGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGC                                                                                                                                                                                                                                                ]
[+] EMBL AI395394             [                                          TTTTTTTTTTTTTTTTAAGTAATGTTATTCA TGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATATCCACTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGACATGACTTGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACATTACCGGTGTACTGCGGAAATGTTGTCCGACATCTTAGGGATACCTGATCGCAAAACATTTTGCCCGGTAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGGATACGGgg                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BF936376             [                                                                   TATTCA TGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATATCGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACTTGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTATACTGCGG AGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCCTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATATATTTCCTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAGATCTCTCATATTCACTGAGTTTGACGAGTAGCACTGCTATCCGTTTCAGCG      ]
[+] EMBL CD073796             [                                                                   TATTCATTGT TTTCAGACGATAGTTTCCTCCGATCGAATATACTCCCCAATATCGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACTTGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTATACTGCGG AGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATG CTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCAC                                                                                                                                                                       ]
[-] EMBL AI976103             [                                                                                                                                                                                                              CATATCACTCATGTTCATCACAACAACACCGGGATACTGCGG AGTGTTGTCAGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATG CTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATATATTT CTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAGATCTCTCATATTCACTGAGTTTGACGAGTAGCACTGCTATCCGTTTCAGCGACCTTG]
[-] EMBL CD138882             [                                                                                                                                                                                                                                                                     CATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATG CTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATATATTT CTGTAGTTCGGCTACAACTTTATCGAACTCATCTTTCTTTAGATCTCTCATATTCACTGAGTTTGACGAGTAGCACTGCTATCC               ]




>consensus_10309#0
TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTAA
GNAATGTTATTCATGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATAT
CGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACT
TGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTAT
ACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAA
GAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGA
AGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAG
TTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAAC
GGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCA
ATAATTCATCGACATCTTTAATATATTTCTGTAGTTTGGCTACAACTTTATCGAACTCAT
CTTTCTTTAGATCTCTCATATTCACTGAGTTTGACGAGTAGCACTGCTATCCGTTTCAGC
GACCTTG

consensusID : consensus_10309#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 588
fasta sequence

                              [AGAAAGTTTATATACGAACAGAACAAATCAGTATTAAGTAATGTTATTCATGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATATCGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACTTGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTGTACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATATATTTCTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAGA]

[+] EMBL CD073447             [AGAAAGTTTATATACGAACAGAACAAATCAGTATTAAGTAATGTTATTCATGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATATCGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACTTGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTGTACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATATATTTCTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAG ]
[-] EMBL CD078996             [ GAAAGTTTATATACGAACAGAACAAATCAGTATTAAGTAATGTTATTCATGTATNTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATATCGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACTTGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTGTACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATATATTTCTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAGA]
[+] EMBL CD120746             [                                                                                                                                                                                                                                                                                                                                                                        CTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGGTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATATATTTCTGTAGTT                                   ]




>consensus_10309#1
AGAAAGTTTATATACGAACAGAACAAATCAGTATTAAGTAATGTTATTCATGTATTTCAG
ACGATAGTTTCTTCCGATCGAATATACTCCCCAATATCGGCTTGGTGAAAGAGGACTATT
GTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACTTGGCAGCAACCCCGAAACCTAGA
GGCATATCACTCATGTTCATCACAACAACACCGGTGTACTGCGGAGTGTTGTCCGACATC
TTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCT
TTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGT
CTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTT
TTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCACGA
TGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATA
TATTTCTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAGA

consensusID : consensus_10309#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 570
fasta sequence

                              [TGTACATACTTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTATACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACTAAAAGTTTTGAAAGCTCATTTTAGAATATAAGTTGAAGCTTACCGGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATACTTAAAACTGTTGAGGATAAATCACAGAGTTACTATTTCTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAGATCTCTCATATTCACTGAGTTTGACGAGTAGCACTGCTATCCGTTTCAGCGACCTTGGGCGCCTCAAGGCG]

[-] EMBL CD118736             [TGTACATACTTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTATACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACTAAAAGTTTTGAAAGCTCATTTTAGAATATAAGTTGAAGCTTACCGGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATACTTAAAACTGTTGAGGATAAATCACAGAGTTACTATTTCTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAGATCTCTCATATTCACTGAGTTTGACGAGTAGCACTGCTATCCGTTTCAGCGACCTTGGGCGCCTCAAGGCG]




>consensus_10309#2
TGTACATACTTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTATACTGCGGAG
TGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTT
GTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAG
CGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGC
TTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACTAAAAGTTT
TGAAAGCTCATTTTAGAATATAAGTTGAAGCTTACCGGCAATAAAAGACACGATCACGAT
GGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATAC
TTAAAACTGTTGAGGATAAATCACAGAGTTACTATTTCTGTAGTTTGGCTACAACTTTAT
CGAACTCATCTTTCTTTAGATCTCTCATATTCACTGAGTTTGACGAGTAGCACTGCTATC
CGTTTCAGCGACCTTGGGCGCCTCAAGGCG

consensusID : consensus_10309#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 513
fasta sequence

                              [TGGGATCAGTGTTTTTTACTTGCAGAGATGACTTGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTGTACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATACTTAAAACTGTTGAGGATAAATCACAGAGTTACTATTTCTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAGATCTCTCATATTCACTG]

[-] EMBL CD083362             [TGGGATCAGTGTTTTTTACTTGCAGAGATGACTTGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTGTACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATACTTAAAACTGTTGAGGATAAATCACAGAGTTACTATTTCTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAGATCTCTCATATTCACTG]




>consensus_10309#3
TGGGATCAGTGTTTTTTACTTGCAGAGATGACTTGGCAGCAACCCCGAAACCTAGAGGCA
TATCACTCATGTTCATCACAACAACACCGGTGTACTGCGGAGTGTTGTCCGACATCTTAG
CGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTA
ACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAA
AGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTCT
TGATTGATGCTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAAGACACGATCACGATGGT
AGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACATCTTTAATACTTA
AAACTGTTGAGGATAAATCACAGAGTTACTATTTCTGTAGTTTGGCTACAACTTTATCGA
ACTCATCTTTCTTTAGATCTCTCATATTCACTG

consensusID : consensus_10309#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 453
fasta sequence

                              [ATTCATGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATATCGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTA-CTTGCAGAGATGACTTGGCAG-CAACCCCGAAA-CCTAGAGGCATATCACTCATGTTCATCA-CAACAACACCGGTATA-CTGCGGAGTGTTGT-CCGACATCTTAGCGATACCTGAT-CG-CAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTT-CTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAATACACGATCGCGCCTCGTGCCGAATTTTTGG]

[-] EMBL CD079531             [ATTCATGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATATCGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTA CTTGCAGAGATGACTTGGCAG CAACCCCGAAA CCTAGAGGCATATCACTCATGTTCATCA CAACAACACCGGTATA CTGCGGAGTGTTGT CCGACATCTTAGCGATACCTGAT CG CAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTT CTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACGGCAATAAAATACACGATCGCGCCTCGTGCCGAATTTTTGG]
[-] EMBL CD158895             [                                                                   GGACTATTGTCATGGGATCAGTGTTTTTTA CTTGCAGAGATGACTTGGCAG CAACCCCGAAA CCTAGAGGCATATCACTCATGTTCATCA CAACAACACCGGTATA CTGCGGAGTGTTGT CCGACATCTTAGCGATACCTGAT CG CAAAACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATG                                                                                                                                                                                                         ]
[-] EMBL CD158798             [                                                                   GGACTATTGTCATGGGATCAGTGTTTTTTA CTTGCAGAGATGACTTGGCAG CAACCCCGAAA CCTAGAGGCATATCACTCATGTTCATCA CAACAACACCGGTATA CTGCGGAGTGTTGT CCGACATCTTAGCGATACCTGAT CG CAAAACATTCTGTCCGTAAAGAAACTGTTGTTCAGCAGATG                                                                                                                                                                                                         ]
[-] EMBL SM900                [                                                                                             TTTACCTTGCAGAGATGACTTGGCAGCCACCCCCGAAACCCTAGAGGCATATCACTCATGTTCATCACCACCAACACCGGTATACCTGCGGAGTGTTGTCCCGACATCTTAGCGATACCTGATCCGCCNANACATTTTGTCCGTAAAGAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAGCTTAGCAAATGTTTTTTNCTTGATTGATGCTG                                                              ]




>consensus_10309#4
ATTCATGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATATCGGCTTGG
TGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACTTGGCAGCA
ACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTATACTGCGGA
GTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAAGAAACTGT
TGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGAAGTCGAGA
GCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAGTTCCAAAG
CTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAACGGCAATAA
AATACACGATCGCGCCTCGTGCCGAATTTTTGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10309#1      -----------------------AGAAAGTTTATATACGAACAGAACAAATCAGTATTAA 37
consensus_10309#4      ------------------------------------------------------------
consensus_10309#0      TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTAA 60
consensus_10309#3      ------------------------------------------------------------
consensus_10309#2      ------------------------------------------------------------
                                                                                   

consensus_10309#1      GTAATGTTATTCATGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATAT 97
consensus_10309#4      --------ATTCATGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATAT 52
consensus_10309#0      GNAATGTTATTCATGTATTTCAGACGATAGTTTCTTCCGATCGAATATACTCCCCAATAT 120
consensus_10309#3      ------------------------------------------------------------
consensus_10309#2      ------------------------------------------------------------
                                                                                   

consensus_10309#1      CGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACT 157
consensus_10309#4      CGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACT 112
consensus_10309#0      CGGCTTGGTGAAAGAGGACTATTGTCATGGGATCAGTGTTTTTTACTTGCAGAGATGACT 180
consensus_10309#3      ---------------------------TGGGATCAGTGTTTTTTACTTGCAGAGATGACT 33
consensus_10309#2      ------------------------------------------------------------
                                                                                   

consensus_10309#1      TGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTGT 217
consensus_10309#4      TGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTAT 172
consensus_10309#0      TGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTAT 240
consensus_10309#3      TGGCAGCAACCCCGAAACCTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTGT 93
consensus_10309#2      ---------TGTACATACTTAGAGGCATATCACTCATGTTCATCACAACAACACCGGTAT 51
                                     * ** *************************************** *

consensus_10309#1      ACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAA 277
consensus_10309#4      ACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAA 232
consensus_10309#0      ACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAA 300
consensus_10309#3      ACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAA 153
consensus_10309#2      ACTGCGGAGTGTTGTCCGACATCTTAGCGATACCTGATCGCAAAACATTTTGTCCGTAAA 111
                       ************************************************************

consensus_10309#1      GAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGA 337
consensus_10309#4      GAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGA 292
consensus_10309#0      GAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGA 360
consensus_10309#3      GAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGA 213
consensus_10309#2      GAAACTGTTGTTCAGCAGATGCTTTTAACCATACACGAAACATGGCATACGGTGATAAGA 171
                       ************************************************************

consensus_10309#1      AGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAG 397
consensus_10309#4      AGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAG 352
consensus_10309#0      AGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAG 420
consensus_10309#3      AGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAG 273
consensus_10309#2      AGTCGAGAGCGGTTATGTGGAGTCTAAAGTTGCCTGTTTTTGAGAAGCGACCGATACAAG 231
                       ************************************************************

consensus_10309#1      TTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAAC 457
consensus_10309#4      TTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAAC 412
consensus_10309#0      TTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAAC 480
consensus_10309#3      TTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAAC 333
consensus_10309#2      TTCCAAAGCTTAGCAAATGTTTTTTCTTGATTGATGCTGCGTGTTTTGCGAGCGTTGAAC 291
                       ************************************************************

consensus_10309#1      ---------------------------------------------GGCAATAAAAGACAC 472
consensus_10309#4      ---------------------------------------------GGCAATAAAATACAC 427
consensus_10309#0      ---------------------------------------------GGCAATAAAAGACAC 495
consensus_10309#3      ---------------------------------------------GGCAATAAAAGACAC 348
consensus_10309#2      TAAAAGTTTTGAAAGCTCATTTTAGAATATAAGTTGAAGCTTACCGGCAATAAAAGACAC 351
                                                                    ********** ****

consensus_10309#1      GATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACAT 532
consensus_10309#4      GATCGCGCCTCGTGCCGAATTTTTGG---------------------------------- 453
consensus_10309#0      GATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACAT 555
consensus_10309#3      GATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACAT 408
consensus_10309#2      GATCACGATGGTAGTAGAAATTGTACTTGTCGTCTGGTCTGTTCAATAATTCATCGACAT 411
                       **** **      *  *** ** *                                    

consensus_10309#1      CTTTAATATATTTCTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAGA---- 588
consensus_10309#4      ------------------------------------------------------------
consensus_10309#0      CTTTAATATATTTCTGTAGTTTGGCTACAACTTTATCGAACTCATCTTTCTTTAGATCTC 615
consensus_10309#3      CTTTAATACTTAAAACTGTTGAGGATAAATCACAGAGTTACTATTTCTGTAGTTTGGCTA 468
consensus_10309#2      CTTTAATACTTAAAACTGTTGAGGATAAATCACAGAGTTACTATTTCTGTAGTTTGGCTA 471
                                                                                   

consensus_10309#1      ------------------------------------------------------------
consensus_10309#4      ------------------------------------------------------------
consensus_10309#0      TCATATTCACTGAGTTTGACGAGTAGCACTGCTATCCGTTTCAGCGACCTTG-------- 667
consensus_10309#3      CAACTTTATCGAACTCATCTTTCTTTAGATCTCTCATATTCACTG--------------- 513
consensus_10309#2      CAACTTTATCGAACTCATCTTTCTTTAGATCTCTCATATTCACTGAGTTTGACGAGTAGC 531
                                                                                   

consensus_10309#1      ---------------------------------------
consensus_10309#4      ---------------------------------------
consensus_10309#0      ---------------------------------------
consensus_10309#3      ---------------------------------------
consensus_10309#2      ACTGCTATCCGTTTCAGCGACCTTGGGCGCCTCAAGGCG 570