These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1031#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 769 fasta sequence [AGACGGCAG--TTTCAAGTGTATGTGTTGCATGAGGTCACTCTCTAAAACAACTC-AATGGAAGCCGACCCAGC-AATAGTTCTGGAATGGTTGGACTCCGTAAACGACGAACTTAGGGAGTTACAACTTAC--TGGCTCGGATCA-ACTGTGCAACGAAGTTCTTTTCTCGGACAATGTTGATGTTTTCTTTGAGCGCTATCCACCTCGCCTCTTCATACCCGCCTTATGCAAAATATTTTTGGATGAATTAGCCCCGGACTCTGTTCTGGAGGCAAATGCTCGGGCCCTCACTTACTATTTGGATGTTAGTTTGGACTGTGCCCCACGGATTGCACGGTCGCCAAATGTATTGACAGCCATGACTTCTAGATTAGATGCAGTTGATATGACATCTGCGAAAAGTAATGAGCTTGGGCAGCAGATTATTAAGATGTTGCAGCTTATTTGTACACGAGAGCCTGGTGCCGTGTATACGGCCGGAGGACTGACTTCCGTCTTACGTTATATACGTCTNTACCCACATCTGCTTCATGCTGATGTTCTGCAGGCTGGGATGGATATTATTAGGCGTTTGTTTAGCAGAGCAGACCCAGCAGACAAGAATCTAACCAGTTAGATTGATGCATTGAGTTCACTCTTTAG-TCGTCGAGAAACAGG-GTGTGCTGACCAAGCATTACGTGCATTTGCTAATTTGGTAGCTCGATTTACTCGAACGGGTGCCGATNNCAAGT-CACTTGCTGATNCTCATATTATGGATNGNCTNCTTTCACGNC] [+] EMBL CD124196 [AGACGGCAG TTTCAAGTGTATGTGTTGCATGAGGTCACTCTCTAAAACAACTC AATGGAAGCCGACCCAGC AATAGTTCTGGAATGGTTGGACTCCGTAAACGACGAACTTAGGGAGTTACAACTTAC TGGCTCGGATCA ACTGTGCAACGAAGTTCTTTTCTCGGACAATGTTGATGTTTTCTTTGAGCGCTATCCACCTCGCCTCTTCATACCCGCCTTATGCAAAATATTTTTGGATGAATTAGCCCCGGACTCTGTTCTGGAGGCAAATGCTCGGGCCCTCACTTACTATTTGGATGTTAGTTTGGACTGTGCCCCACGGATTGCACGGTCGCCAAATGTATTGACAGCCATGACTTCTAGATTAGATGCAGTTGATATGACATCTGCGAAAAGTAATGAGCTTGGGCAGCAGATTATTAAGATGTTGCAGCTTATTTGTACACGAGAGCCTGGTGCCGTGTATACGGCCGGAGGACTGACTTCCGTCTTACGTTATATACGTCTNTACCCACATCTGCTTCATGCTGATGTTCTGCAGGCTGGGATGGATATTATTAGGCGTTTGTTTAGCAGAGCAGACCCAGCAGACAAGAATCTAACCAGTTAGATTGATGCATTGAGTTCACTCTTTAG TCGTCGAGAAACAGG GTGTGCTGACCAAGCATTACGTGCATTTGCTAATTTGGTAGCTCGATTTACTCGAACGGGTGCCGATNNCAAGT CACTTGCTGATNCTCATATTATGGATNGNCTNCTTTCACGN ] [-] EMBL CD124320 [ gcGCAGNNTTTCAAGTGTATGTGTGNCATGAGGTCACT TCTAAANC ACTCNAATGNAAGCNGA CCAGCNAATAGTTCTGGAATGGTTGGACTCCGTAAACGACG ACTTAGGGAGTTAC AC TACNNTGCATTGGA CANNCTGTGCAACGAAG TCTTTTCTCGGACAATGTTGATG TTTCTTTGAGCGCTATCCACCTCGCCTCTTCATACCCGCCTTATGCAAAATATTTTTGGATGAATTAGCCCCGGACTCTGTTCTGGAGGCAAATGCTCGGGCCCTCACTTACTATTTGGATGTTAGTTTGGACTGTGCCCCACGGATTGCACGGTCGCCAAATGTATTGACAGCCATGACTTCTAGATTAGATGCAGTTGATATGACATCTGCGAAAAGTAATGAGCTTGGGCAGCAGATTATTAAGATGTTGCAGCTTATTTGTACACGAGAGCCTGGTGCCGTGTATACGGCCGGAGGACTGACTTCCGTCTTACGTTATATACGTCTTTACCCACATCTGCTTCATGCTGATGTTCTGCAGGCTGGGATGGATATTATTAGGCGTTTGTTTAGCAGAGCAGACCCAGCAGACAAGAATCTAACCAGTTGGATTGATGCATTGAGTTCACTC TTAGATCGTCGAGAAACAGGTGT TGCTGACCAAGCATTACGTGCATTTGCTAATTTGGTAGCTCGATTTACTCGAACGGGTGCCGAT CCAAGTCCACTTGCTGATTCTCATATTATTGATTGTCTTCTTCAACGtc] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||