cluster # 10311

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Schistosoma mansoni
cluster # 10311 cluster # 10311 Sequences # 15 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10311#0 length = 673 sequences # 13

consensus_10311#1 length = 625 sequences # 1
consensus_10311#2 length = 340 sequences # 1

consensusID : consensus_10311#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 673
fasta sequence

                              [CCTCCGAGGCCANAATTGGGCACGAGGACGAAAGTGAAAGCTTTTGGCAGAAAGGGGATTATAAATACGTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCTGAAGGGCTTACCGGCTATTTTGGATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGATGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGGTGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACCGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACATTAAATTCGACTCTTCAGGCTGAAAATTTAATCTTGATTCATAGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATG-CCTTTGGATTAAAATATATTTTTATTGATTTT--GAAAAAAAAAAAAAAAAA]

[+] EMBL CD081370             [CCTCCGAGGCCANAATTGGGCACGAGGACGAAAGTGAAAGCTTTTGGCAGAAAGGGGATTATAAATACGTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCTGAAGGGCTTACCGGCTATTTTGGATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGATGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGGTGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACTGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACATTAAATTCGACTTTTCAGGCTGAAAATTTAATCTTGATTCATAGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATG CCTTTGGATT AAATATATTTT                              ]
[-] EMBL CD075204             [                            CGAAAGTGAAAGCTTTTGGCAGAAAGGGGATTATAAATACGTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCTGAAGGGCTTACCGGCTATTTTGGATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGATGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGGTGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACTGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACATTAAATTCGACTTTTCAGGCTGAAAATTTAATCTTGATTCATAGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATGCCCTTTGGAT                                           ]
[-] EMBL CD074988             [                                        CTTTTGGCAGAAAGGGGATTATAAATACGTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCTGAAGGGCTTACCGGCTATTTTGGATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGATGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGGTGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACTGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACATTAAATTCGACTCTTCAGGCTGAAAATTTAATCTTGATTCATAGTTACTTTTTTGCGAGGAAAATTTTTATTTTTAGATAATG CCTTTGGATTAAAATAAGTTTTTATT                          ]
[+] EMBL CD185037             [                                                                                                                   GGCTATTTTGGATTATCCTGTTCAGTCGGTTATTTGTAAACCTTCTGATGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGGTGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACGCTCAACTGGAATCCTGTTCAGCTACTT                                                                                                                                                                                     ]
[-] EMBL CD142240             [                                                                                                                                                               CTGATGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGGTGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCAGTCCTCCTGCAAGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACCGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGT                                                                                                                                                                ]
[-] EMBL AI395758             [                                                                                                                                                                                                                    TTCAGCCGAGGTGGGCGT GGATCATTTCCGTTGGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACCGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACATTAAATTCGACTCTTCAGGCTGAAAATTTAATCTTGATTCATAGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATG CCTTTGGATTAAAATATATTTTTATTGATTTTCGGAAAAAAAAAAAAAAAAA]
[-] EMBL CD181261             [                                                                                                                                                                                                                                       GGATCATTTCCGTTCGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACtg                                                                                                                                                                                                        ]
[-] EMBL CD181466             [                                                                                                                                                                                                                                       GGATCATTTCCGTTCGCGTCTCTTCGGATGGTGGCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACCG                                                                                                                                                                                                        ]
[+] EMBL CD146829             [                                                                                                                                                                                                                                                                                                                   TGCAGGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACCGGAATCCTGTTCAGCTACTTT                                                                                                                                                                                    ]
[-] EMBL AI395815             [                                                                                                                                                                                                                                                                                                                                    TAACGGACATGGACATTCATTATTCTCTTAAAAACCGGAGCGTAAATCAATGGACGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATATTCGTGATGTAGAGTTTGTGTGTTCGCCTGTTGATAGCTCTTACAACACTCAACCGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACATTAAATTTGACTCTTCAGGCTGAAAATTTAATCTTGATTCATAGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATG CCTTTGGATTAAAATATATTTTTATTGATTTTCGGAAAAAAAAAAAAAAAA ]
[-] EMBL AI395667             [                                                                                                                                                                                                                                                                                                                                                             cnTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACCGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACATTAAATTCGACTCTTCAGGCTGAAAATTTAATCTTGATTCATAGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATG CCTTTGGATTAAAATATATTTTTATTGATTTT  TAAAAAA           ]
[+] EMBL CD079055             [                                                                                                                                                                                                                                                                                                                                                                                                              GAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACCGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACATTAAATTCGACTCTTCAGGCTGAAAATTTAATCTTGATTCATAGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATG CCTTTGGATTAAAATATATTTT                              ]
[-] EMBL CD073509             [                                                                                                                                                                                                                                                                                                                                                                                                               AGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACCGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACATTAAATTCGACTCTTCAGGCTGAAAATTTAATCTTGATTCATAGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATG CCTTTGGATTAAAATATATTTTT                             ]




>consensus_10311#0
CCTCCGAGGCCANAATTGGGCACGAGGACGAAAGTGAAAGCTTTTGGCAGAAAGGGGATT
ATAAATACGTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCTGAAGGGCTTACCGGCTA
TTTTGGATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGATGGCCAAACCCTAAAAA
ACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGGTGGGCGTGGGATCATTT
CCGTTCGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCA
GTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACC
GGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGATTCCTATTCCAAAAGATA
TTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAGCTCTTACAACACTCAACCGGAAT
CCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACA
TTAAATTCGACTCTTCAGGCTGAAAATTTAATCTTGATTCATAGTTACTTTTTTGCAAGG
AAAATTTTTATTTTTAGATAATGCCTTTGGATTAAAATATATTTTTATTGATTTTGAAAA
AAAAAAAAAAAAA

consensusID : consensus_10311#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 625
fasta sequence

                              [TTCGGCACGACGGNCTTTTGGCAGAAAGGGGTATTATAAATACCGTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCTGAAGGGCTTACCGGCTATTTTGGATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGATGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGGTGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTGGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATANGCTCTTACAACACTCAACTGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACATTAAATTCGACTCTTCAGGCTGAAAATTTAATCTTGATTCATAGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATGCCTTTGGATTAAAATATATTTTTAT]

[+] EMBL CD081168             [TTCGGCACGACGGNCTTTTGGCAGAAAGGGGTATTATAAATACCGTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCTGAAGGGCTTACCGGCTATTTTGGATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGATGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGGTGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTGGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATANGCTCTTACAACACTCAACTGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACATTAAATTCGACTCTTCAGGCTGAAAATTTAATCTTGATTCATAGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATGCCTTTGGATTAAAATATATTTTTAT]




>consensus_10311#1
TTCGGCACGACGGNCTTTTGGCAGAAAGGGGTATTATAAATACCGTTCTACCGATGAGTG
GTGGTAAAGTCCCAGATCTGAAGGGCTTACCGGCTATTTTGGATTATCCTGTTCAGTCAG
TTATTTGTAAACCTTCTGATGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAG
GCTATGCATTCAGCGGAGGTGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTG
GCAGGTCTTGGTATGAAGCGAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATG
TAACAGACATGGACAATCATTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGA
CACTATGGACTGTGGAGATTCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTT
CGGCTGTTGATANGCTCTTACAACACTCAACTGGAATCCTGTTCAGCTACTTTAAACATT
CGCGGCTTACTGTCAAACTGCTGGCACAGAATAAACATTAAATTCGACTCTTCAGGCTGA
AAATTTAATCTTGATTCATAGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATG
CCTTTGGATTAAAATATATTTTTAT

consensusID : consensus_10311#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 340
fasta sequence

                              [AGCCATTAACTCGCGATCATGGTTTCCCATTGAGAATTATCATCCCTGGTTCTATTGGAGCTCGTCAAGTTAAGTGGCTAGGTCAAATTACATTATCGACAGACGAAAGTGAAAGCTTTTGGCAGAAAGGGGATTATAAATACGTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCTGAAGGGCTTACCGGCTATTTTGAATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGATGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGGTGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGG]

[+] EMBL CD137110             [AGCCATTAACTCGCGATCATGGTTTCCCATTGAGAATTATCATCCCTGGTTCTATTGGAGCTCGTCAAGTTAAGTGGCTAGGTCAAATTACATTATCGACAGACGAAAGTGAAAGCTTTTGGCAGAAAGGGGATTATAAATACGTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCTGAAGGGCTTACCGGCTATTTTGAATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGATGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGGTGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGG]




>consensus_10311#2
AGCCATTAACTCGCGATCATGGTTTCCCATTGAGAATTATCATCCCTGGTTCTATTGGAG
CTCGTCAAGTTAAGTGGCTAGGTCAAATTACATTATCGACAGACGAAAGTGAAAGCTTTT
GGCAGAAAGGGGATTATAAATACGTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCTGA
AGGGCTTACCGGCTATTTTGAATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGATG
GCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGGTG
GGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10311#0      ------------------------------------------------------------
consensus_10311#1      ------------------------------------------------------------
consensus_10311#2      AGCCATTAACTCGCGATCATGGTTTCCCATTGAGAATTATCATCCCTGGTTCTATTGGAG 60
                                                                                   

consensus_10311#0      -------------CCTCCGAGGCCANAATTGGGCA-CGAG-GACGAAAGTGAAAGCTTTT 45
consensus_10311#1      ----------------------------TTCGGCA-CGAC-GGN-----------CTTTT 19
consensus_10311#2      CTCGTCAAGTTAAGTGGCTAGGTCAAATTACATTATCGACAGACGAAAGTGAAAGCTTTT 120
                                                   *     * ***  *             *****

consensus_10311#0      GGCAGAAAGGGG-ATTATAAATAC-GTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCT 103
consensus_10311#1      GGCAGAAAGGGGTATTATAAATACCGTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCT 79
consensus_10311#2      GGCAGAAAGGGG-ATTATAAATAC-GTTCTACCGATGAGTGGTGGTAAAGTCCCAGATCT 178
                       ************ *********** ***********************************

consensus_10311#0      GAAGGGCTTACCGGCTATTTTGGATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGA 163
consensus_10311#1      GAAGGGCTTACCGGCTATTTTGGATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGA 139
consensus_10311#2      GAAGGGCTTACCGGCTATTTTGAATTATCCTGTTCAGTCAGTTATTTGTAAACCTTCTGA 238
                       ********************** *************************************

consensus_10311#0      TGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGG 223
consensus_10311#1      TGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGG 199
consensus_10311#2      TGGCCAAACCCTAAAAAACACTGGGAGTGTAAGTTTATCAGGCTATGCATTCAGCGGAGG 298
                       ************************************************************

consensus_10311#0      TGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGC 283
consensus_10311#1      TGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGGCAGGTCTTGGTATGAAGC 259
consensus_10311#2      TGGGCGTGGGATCATTTCCGTTCGCGTTTCTTCGGATGGTGG------------------ 340
                       ******************************************                  

consensus_10311#0      GAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCA 343
consensus_10311#1      GAAATTGTCACCAGCCAGTCCTCCTGCAGGACAAGGTTATGTAACAGACATGGACAATCA 319
consensus_10311#2      ------------------------------------------------------------
                                                                                   

consensus_10311#0      TTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTAGAGAT 403
consensus_10311#1      TTATTCTCTTAAAAACCGGAGCGTAAAACAATGGGCGTGGACACTATGGACTGTGGAGAT 379
consensus_10311#2      ------------------------------------------------------------
                                                                                   

consensus_10311#0      TCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATAG-CTCTT 462
consensus_10311#1      TCCTATTCCAAAAGATATTCGTGAAGTAGAGTTTGTGTGTTCGGCTGTTGATANGCTCTT 439
consensus_10311#2      ------------------------------------------------------------
                                                                                   

consensus_10311#0      ACAACACTCAACCGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACT 522
consensus_10311#1      ACAACACTCAACTGGAATCCTGTTCAGCTACTTTAAACATTCGCGGCTTACTGTCAAACT 499
consensus_10311#2      ------------------------------------------------------------
                                                                                   

consensus_10311#0      GCTGGCACAGAATAAACATTAAATTCGACTCTTCAGGCTGAAAATTTAATCTTGATTCAT 582
consensus_10311#1      GCTGGCACAGAATAAACATTAAATTCGACTCTTCAGGCTGAAAATTTAATCTTGATTCAT 559
consensus_10311#2      ------------------------------------------------------------
                                                                                   

consensus_10311#0      AGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATGCCTTTGGATTAAAATATAT 642
consensus_10311#1      AGTTACTTTTTTGCAAGGAAAATTTTTATTTTTAGATAATGCCTTTGGATTAAAATATAT 619
consensus_10311#2      ------------------------------------------------------------
                                                                                   

consensus_10311#0      TTTTATTGATTTTGAAAAAAAAAAAAAAAAA 673
consensus_10311#1      TTTTAT------------------------- 625
consensus_10311#2      -------------------------------