|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10315#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1836 fasta sequence
[CAAGCTCCATTCCGGCAACTTATGACCCATCGTGGTGTACCTCAACTCCATTTCATTCTCCAAACTTCGCTTGTGCTTATACTTATTCACCTACGGTCCCACCCCGTCAACCGGTCATGTTCGACCCAAGTCCACAGAGGCATATGATGCCAAACGTTTCGTATCCTACATATGGTTCTCCACAGTTGCCGTTGCATATGNCAAGTCAGTTAGGGTGTAACTGGAATGCAGCTAGACCTACTTATGGTTATCCGGTTAACGGAGGTGCGGTCCAGTCGTTTGGTATGTGGCCAGACGGAAGATCATCTGTTCATCCCAATGGTTTGGCAGTGACGGGTCCACGGTTTCCATTCCAGAGTACTTTAGATTCTCCAAACACAGTGGCTAGTGAAAATACTGCGAATACTCCAATTTCTAAAGAAGTCCTACAGCAACCGCCTGCTAGTTTTCAGGACAAAGGAGTAAAAGAGCAGTGGAGTGACGAACTCAAAGAGTACGTCCAGCGAGCATTTTGCAGCATTGATACAAGTGAGGAAAAAGATCAGATGGAACGGATTTTAAAAGAAAAATTGGAGTACGTTTTTAGAAATAACATCAAGGTCGATTGGAAGACAGAAAATATTCCGACTATCCCCAGTCGTGCGATTGCTAGTTTCCGTAAATCCTTTAATATCAGGGGCAATTCTGTCAATGTCGTGCGACCTGTTCAACTTCCCGGTCCTCGTGGACTTCGCCCAACGGGTCCATCAAGGGGAGCTCCTGCACGTCTTCCTGTTGGGCTTTTGTCGAGAGGTGGCCGCAATGTGTTTTCGTCTTCAGTTGTTAAGAGTATATCACCATCCAAAAAATTGCCATCGAAATCTCGCTCACCTAGTCGTTCTCCTGTTTCCAAACCTTTAAAAGATTGGCAGAGAAAGCGTTTGTATAGATCCAGGTCTAGTTCATCCTCAGAATCACGTGGCTCCCCTCATTCTTCATCCTCAAGTAGTTTCAGGACAAAACGCCTTCGGCGTCGGGACTCTCGGTCGCGCTCTGGTTCTCGACATGCACAGCGAAAGACGAATGATGTAAAGGATTCTCAAAAAAGTACACCGCAGTTAGCCACCAGGGGGAATTCCAAAGGTAGACGACGGAGGCGTGGTGGTGCTTCAAACGCCGACTCAAGTACAGACGCAAATACTTCTAATGAAGATGTAACAGCTGCAAGGGGTCGTGGACGTGGCAATTGGCGTAGTAAACGTGGAAGCATTTCAAAGCATACTCCTCCAAGTGAATCTCGCCTTACACAACGAGCCAGTAGATTTAAAGATCATCTGGTGCAGTCACCTATTGGATCAGGCTCCATTGCACGGACAACCAGTCAGCTGCTTTCGAATTACACTGACGAACGTGATGATTTAGCTGTTGATTTCGGTAGCTGTCAAATCGTTGGTACCATGCAAGAAATAGAAAAACAATACTTGAGACTGACTCGAGCTCCAGATCCTACAGAAGTGCGACCCTTAGCAATTTTGAAGCTTTCTTTGGAGCACGTCAAAGAAAAATGGCGTTCAAATACCGATTACCACTGGGTGTGTGAGCAGTTCAAAAGTATACGTCAAGACTTAACTGTACAAGGTATCGAAGATGATTTTGCAGTATCGGTTTATGAAGCACATGCAGATGTAGCC-TTAG-AGCTGGTGATTTTG-AGAGTTTCATCAATGTCAAAGTCAGTTGCTTCGTCTTCATAAAGAAGGCTTAGGTGTTAGTAGGCTGCTCGAATTTACTGCCTACAGACTTCTTTA-TACATCTTCACTCTCGATATTTTAGGTAAGTTAATCGCAATTCGAAAATTGC]
[+] EMBL CD142449 [CAAGCTCCATTCCGGCAACTTATGACCCATCGTGGTGTACCTCAACTCCATTTCATTCTCCAAACTTCGCTTGTGCTTATACTTATTCACCTACGGTCCCACCCCGTCAACCGGTCATGTTCGACCCAAGTCCACAGAGGCATATGATGCCAAACGTTTCGTATCCTACATATGGTTCTCCACAGTTGCCGTTGCATATGNCAAGTCAGTTAGGGTGTAACTGGAATGCAGCTAGACCTACTTATGGTTATCCGGTTAACGGAGGTGCGGTCCAGTCGTTTGGTATGTGGCCAGACGGAAGATCATCTGTTCATCCCAATGGNTTGGC ]
[-] EMBL CD198501 [ AAGCTCCATTCCGGCAACTTATGACCCATCGTGGTGTACCTCAACTCCATTTCATTCTCCAAACTTCGCTTGTGCTTATACTTATTCACCTACGGTCCCACCCCGTCAACCGGTCATGTTCGACCCAAGTCCACAGAGGCATATGATGCCAAACGTTTCGTATCCTTCATATGGTTCTCCACAGTTGCCGTTGCATAAGCAAAGTCAGTTAGGGTGTAACTGGAATGCAGCTAGACCTACTTATGGTTATCCGGTTAACGGAGGTGCGGTCCAGTCGTTTGGTATGTGGCCAGACGGAAGATCATCTGTTCATCCCAATGGTTTGGCAGTGACGGGTC ]
[+] EMBL CD142448 [ CTACTTATGGTTATCCGGTTAACGGAGGTGCGGTCCAGTCGTTTGGTATGTGGCCAGACGGAAGATCATCTGTTCATCCCAATGGTTTGGCAGTGACGGGT ]
[+] EMBL CD142369 [ CTACTTATGGTTATCCGGTTAACGGAGGTGCGGTCCAGTCGTTTGGTATGTGGCCAGACGGAAGATCATCTGTTCATCCCAATGGTTTGGCAGTGACGGGT ]
[-] EMBL CD177939 [ TTATCCGGTTAACGGAGGTGCGGTCCAGTCGTTTGGTATGTGGCCAGACGGAAGATCATCTGTTCATCCCAATGGTTTGGCAGTGACGGGTCCACGGTTTCCATTCCAGAGTACTTTAGATTCTCCAAACACAGTGGCTAGTGAAAATACTGCGAATACTCCAATTTCTAAAGAAGTCCTACAGCAACCGCCTGCTAGTTTTCAGGACAAAGGAGTAAAAGAGCAGTGGAGTGACGAACTCAAAGAGTACGTCCAGCGAGCATTTTGCAGCATTGATACAAGTGAGGAAAAAGATCAGATGGAACGGATTTTAAAAGAAAAATTGGAGTACGTTTTTAGAAATAACATCAAGGTCGATTGGAAGACAGAAAATATTCCGACTATCCCCAGTCGTGCGATTGCTAGTTTCCGTAAA ]
[-] EMBL CD125945 [ TGATACAAGTGAGGAAAAAGATCAGATGGAACGGATTTTAAAAGAAAAATTGGAGTACGTTTTTAGAAATAACATCAAGGTCGATTGGAAGACAGAAAATATTCCGACTATCCCCAGTCGTGCGATTGCTAGTTTCCGTAAATCCTTTAATATCAGGGGCAATTCTGTCAATGTCGTGCGACCTGTTCAACTTCCCGGTCCTCGTGGACTTCGCCCAACGGGTCCATCAAGGGGAGCTCCTGCACGTCTTCCTGTTGGGCTTTTGTCGAGAGGTGGCCGCAATGTGTTTTCGTCTTCAGTTGTTAAGAGTATATCACCATCCAAAAAATTGCCATCGAAATCTCGCTCACCTAGTCGTTCCCCTGTTTCCAAACCTTTAAAAGATTGGCAGAGAAAGCGTTTGTATAGATCCAGGTCTAGTTCATCCTCAGAATCACGTGGCTCCCCTCATTCTTCATCCTCAAGTAGTTTCAGGACAAAACGCCTTCGGCGTC GGACTCTC GTCGCGCTCTG ]
[-] EMBL CD191252 [ GATCAGATGGAACGGGTTTTAAAAGAAAAATTGGAGTACGTTTTTAGAAATAACATCAAGGTCGATTGGAAGACAGAAAATATTCCGACTATCCCCAGTC ]
[-] EMBL CD188933 [ AGATGGAACGGATTTTAAAAGAAAAATTGGAGTACGTTTTTAGAAATAACATCAAGGTCGATTGGAAGACAGAAAATATTCCGACTATCCCCAGTCGTGCGATTGCTAGTTTCCGTAAATCCTTTAATATCAGGGGCAATTCTGTCAATGTCGTGCGACCTGTTCAACTTCCCGGTCCTCGTGGACTTCGCCCAACGGGTCCATCAAGGGGAGCTCCTGCACGTCTTCCTGTTGGGCTTTTGTCGAGAGGTGGCCGCAATGTGTTTTCGTCTTCAGTTGTTAAGAGTATATCACCATCCAAAAAATTGCCATCGAAATCTCGCTCACCTAGTCGTTCTCCTGTTTCCAAACCTTTAAAAGATTGGCAGAGAAAGCGTT ]
[-] EMBL CD178581 [ GAAAAATTGGAGTACGTTTTTAGAAATAACATCAAGGTCGATTGGAAGACAGAAAATATTCCGACTATCCCCAGTCGTGCGATTGCTAGTTTCCGTAAATCCTTTAATATCAGGGGCAATTCTGTCAATGTCGTGCGACCTGTTCAACTTCCCGGTCCTCGTGGACTTCGCCCAACGGGTCCATCAAGGGGAGCTCCTGCACGTCTTCCTGTTGGGCTTTTGTCGAGAGGTGGCCGCAATGTGTTTTCGTCTTCAGTTGTTAAGAGTATATCACCATCCAAAAAATTGCCATCGAAATCTCGCTCACCTAGTCGTTCTCCTGTTTCCAAACCTTTAAAAGATTGGCAGAGAAAGCGTTTGTATAGATCCAGGTCTAGTTCATCCTCAGAATCACGTGGC ]
[+] EMBL CD114810 [ CTCCTGCACGTCTTCCTGTTGGGCTTTTGTCGAGAGGTGGCCGCAATGTGTTTTCGTCTTCAGTTGTTAAGAGTATATCACCATCCAAAATATTGCCATCGAAATCTCGCTCACCTAGTCGTTCTCCTGTTTCCAAACCTTTAAAAGATTGGCAGAGAAAGCGTTTGTATAGATCCAGGTCTAGTTCATCCTCAGAATCACGTGGCTCCCCTCATTCTTCATCCTCAAGTAGTTTCAGGACAAAACGCCTTCGGCGTCGGGACTCTCGGTCGCGCTCT ]
[+] EMBL CD186700 [ CTGTTGGGCTTTTGTCGAGAGGTGGCCGCAATGTGTTTTCGTCTTCAGTTGTTAAGAGTATATCACCATCCAAAAAATTGCCATCGAAATCTCGCTCACCTAGTCGTTCTCCTGTTTCCAAACCTTTAAAAGATTGGCAGAGAAAGCGTTTGTATAGATCCAGGTCTAGTTCATCCTCAGAATCACGTGGCTCCCCTCATTCTTCATCCTCAAGTAGTTTCAGGACAAAACGCCTTCGGCGTCGGGACTCTCGGTCGCGCTCTGGTTCTCGACATGCACAGCGAAAGACGAATGATGTAAAGGATTCTCAAAAAAGTACACCGCAGTTAGCCACCAGGGGGAATTCCAAAGGTAGACGACGGAGGCGTGGTGGTGCTTCAAACGCCGACTCAAGTACAGACGCAAATACTTCTAATGAAGATGT ]
[-] EMBL CD096249 [ CCAAAGGTAGACGACGGAGGCGTGGTGGTGCTTCAAACGCCGACTCAAGTACAGACGCAAATACTTCTAATGAAGATGTAACAGCTGCAAGGGGTCGTGGACGTGGCAATTGGCGTAGTAAACGTGGAAGCATTTCAAAGCATACTCCTCCAAGTGAATCTCGCCTTACACAACGAGCCAGTAGATTTAAAGATCATCTGGTGCAGTCACCTATTGGATCAGGCTCCATTGCACGGACAACCAGTCAGCTGCTTTCGAATTACACTGACGAACGTGATGATTTAGCTGTTGATTTCGGTAGCTGTCAAATCGTTGGTACCATGCAAGAAATAGAAAAACAATACTTGAGACTGACTCGAGCTCCAGATCCTACAGAAGTGCGACCCTTAGCAATTTTGAAGCTTTCTTTGGAGCACGTCAAAGAAAAATGGCGTTCAAATACCGATTACCACTGGGTGTGTGAGCAGTTCAAAAGTATACGTCAAGACTTAACTGTACAAGGTATCGAAGATGATTTTGCAGTATCGGTTTATGAAGCACATGCAGATGTA ]
[+] EMBL CD136794 [ AAGTACAGACGCAAATACTCCTAATGAAGATGTAACAGCTGCAAGGGGTCGTGGACGTGGCAATTGGCGTAGTAAACGTGGAAGCATTTCAAAGCATACTCCTTCAAGTGAATCTCGCCTTACACAACGAGCCAGTAGATTTAAAGATCATCTGGTGCAGTCACCTATTGGATCAGGCTCCATTGCACGGACAACCAGTCAGCTGCTTTCGAATTACACTGACGAACGTGATGATTTAGCTGTTGATTTCGGTAGCTGTCAAATCGTTGGTACCATGCAAGAAATAGAAAAACAATACTTGAGACTGACTCGAGCTCCAGATCCTACAGAAGTGCGACCCTTAGCAATTTTGAAGCTTTCTTTGGAGCACGTCAAAGAAAAATGGCGTTCAAATACCGATTACCACTGNGTGTGTGAGCAGTTCAAAAGTATACGTCAAGACTTAACTGTACAAGGTATCGAAGATGATTNTGCAGTATCGGTTTATGAAGCACATGCAGATGTAGCCTTTAG AGCTGGTGATTNTG AGAGTTTCATCAATGTCAAAGTCAGTTGC ]
[-] EMBL CD186395 [ AGCTGCTGATTTCGGTAGCTGTCAAATCGTTGGTACCATGCAAGAAATAGAAAAACAATACTTGAGACTGACTCGAGCTCCAGATCCTACAGAAGTGCGACCCTTAGCAATTTTGAAGCTTTCTTTGGAGCACGTCAAAGAAAAATGGCGTTCAAATACCGATTACCACTGGGTGTGTGAGCAGTTCAAAAGTATACGTCAAGACTTAACTGTACAAGGTATCGAAGATGATTTTGCAGTATCGGTTTATGAAGCACATGCAGATGTAGCC TTAGAAGCTGGTGATTTTGAAGAGTTTCATCAATGTCAAAGTCAGTTGCTTCGTCTTCATAAAGAAGGCTTAGGTGTTAGTAGGCTGCTCGAATTTACTGCCTACAGACTTCTTTATTACATCTTCACTCTCGATATTTTAGGTAAGTTAATCGCAATTCGAAAATTGC]
[-] EMBL CD186346 [ GTAGCTGTCAAATCGTTGGTACCATGCAAGAAATAGAAAAACAATACTTGAGACTGACTCGAGCTCCAGATCCTACAGAAGTGCGACCCTTAGCAATTTTGAAGCTTTCTTTGGAGCACGTCAAAGAAAAATGGCGTTCAAATACCGATTACCACTGGGTGTGTGAGCAGTTCAAAAGTATACGTCAAGACTTAACTGTACAAGGTATCGAAGATGATTTTGCAGTATCGGTTTATGAAGCACATGCAGATGTAGCC TTAGAAGCTGGTGATTTTGAAGAGTTTCATCAATGTCAAAGTCAGTTGCTTCGTCTTCATAAAGAAGGCTTAGGTGTTAGTAGGCTGCTCGAATTTACTGCCTACAGACTTCTTTA TACATCTTCACTCTCGATATTTTAGGTAAGTTAATCGCAATTCGAAAATTGC]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||