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Schistosoma mansoni
cluster # 10316 cluster # 10316       Sequences # 15       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10316#0 length = 1413 sequences # 7  
consensus_10316#1 length = 915 sequences # 6  
consensus_10316#2 length = 353 sequences # 2  

consensusID : consensus_10316#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1413
fasta sequence
                              [AAATTCGTTAAGGAAAGATATTTTAGGAAATGTTTGAACAAGTTTATTTTGGAAAATAAGCATCTGTGAATTATCTAAAAACAGAAAATATCAAACAACTGCCAGCTGGTAGTTAGTTATGAGTTAATTACAAAAGATTTCATGTATGTAATAGAGAAAATGAGTAAACGCACAAAGCTTCTTAGTCTTTATTACTATGAGCTCAATACAAACCTGAGAAAAGGTAAAGTCAAACTGACAAAAAGAATTGATTGAAATGAGCTGTTCTTCTTATATCTGTTGTTCTTATCATCATTACTATTTATTATCTGCAAACATAATGGGAATATAATATTAAACTAGTACAGACATTATATGAAAGGAAACGAAATGTTTGGCTGTTGAATAATCTGAAAAGCTTTATTGATCACAGCTTCAGTAGTACAGTATACAATTG--ATTAGAAAAATTTCGTTGAAAACATTGGACATCAGAAAATGAAAGAATACTTTCCATCGTATTCTCAATCATTTTTCTGGGGATTTCATGCCAAGTGATTTTGATGATGGAAAATTCATAGGACCGACTTGACAAACAGTATTGTTAGGTGGCGTTAAATTAATAAGAAGTTTAGCTACTTCTTCGTTTTCCATGGAATGCGGATTTTGTATATAACGATAGATCATATCTTGTGAGAATCCGCTCTGTTCTAGATGAATAACTAGGCGGGCCAGTTGTTTTGCCTTGAATAGATCATTAGAACAGGTAACTGTAATCAAAAGAGCTGATTGTTCACTAAGCTTATGAGGATTTTGATTAGTTGAGAAAGTTGTCAATAGTGAGTTGAAGATATGAAGAAGATTTAATAAGATCAATTTGTTCTGCTCAAGATTTTGACATGTAAAGGCTCTTTTCT-GTAATCCTAA-TTCTAAAAGACGACGAGCATGAGAATGAGAAAAACCACAATTTGTTGCCCATGACAACAAACTTTCCAAAAGTTTTATCTGAGAATGATGTGGAACAGGTGTTTCTATGCCGATATTATCGATTNTATACATATCTTGACATTTTTCAGTATTCACAAAACTAGTTTGTTCAGCGATACCACCGAAGGCTTGAGGTTGATTGGTGGAGGCAATCGACTTTATGCATTATGGAACACAGGAGTTTAAAAATGGCCTAGGCAATTTTGTAGATTTTGTCGATGCATTTCCATATCCAGATGAATTATGAAGGCCATTTGAGATAGCTACATCTTGTGCACATCCTTGAGCTTTATGATTATTTATGAAACAAGATTTGTTTTGAAATGAATTAGCTGTTTCTGGAAATTTGCAAGAATCGTGTTTGTTTTCTGAACTAGAAAGAGGAGGATAACTCTTTTTTTTTGAATTTACGGAGTGAGCATTAGCCTCGTGCCGAATNTTGGCCTNGAG]

[+] EMBL CD074497             [AAATTCGTTAAGGAAAGATATTTTAGGAAATGTTTGAACAAGTTTATTTTGGAAAATAAGCATCTGTGAATTATCTAAAAACAGAAAATATCAAACAACTGCCAGCTGGTAGTTAGTTATGAGTTAATTACAAAAGATTTCATGTATGTAATAGAGAAAATGAGTAAACGCACAAAGCTTCTTAGTCTTTATTACTATGAGCTCAATACAAACCTGAGAAAAGGTAAAGTCAAACTGACAAAAAGAATTGATTGAAATGAGCTGTTCTTCTTATATCTGTTGTTCTTATCATCATTACTATTTATTATCTGCAAACATAATGGGAATATAATATTAAACTAGTACAGACATTATATGAAAGGAAACGAAATGTTTGGCTGTTGAATAATCTGAAAAGCTTTATTGATCACAGCTTCAGTAGTACAGTATACAATTG  ATTAGAAAAATTTCGTTGAAAACATTGGACATCAGAAAATGAAAGAATACTTTCCATCGTATTCTCAATCATTTTTCTGGGGATTTCATGCCAAGTGATTTTGATGATGGAAAATTCATAGGACCGACTTGACAAACAGTATTGTTAGGTGGCGTTAAATTAATAAGAAGTTTAGCTACTTCTTCGTTTTCCATGGAATGCGGATTTTGTATATAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD074320             [AAATTCGTTAAGGAAAGATATTTTAGGAAATGTTTGAACAAGTTTATTTTGGAAAATAAGCATCTGTGAATTATCTAAAAACAGAAAATATCAAACAACTGCCAGCTGGTAGTTAGTTATGAGTTAATTACAAAAGATTTCATGTATGTAATAGAGAAAATGAGTAAACGCACAAAGCTTCTTAGTCTTTATTACTATGAGCTCAATACAAACCTGAGAAAAGGTAAAGTCAAACTGACAAAAAGAATTGATTGAAATGAGCTGTTCTTCTTATATCTGTTGTTCTTATCATCATTACTATTTATTATCTGCAAACATAATGGGAATATAATATTAAACTAGTACAGACATTATATGAAAGGAAACGAAATGTTTGGCTGTTGAATAATCTGAAAAGCTTTATTGATCACAGCTTCAGTAGTACAGTATACAATTG  ATTAGAAAAATTTCGTTGAAAACATTGGACATCAGAAAATGAAAGAATACTTTCCATCGTATTCTCAATCATTTTTCTGGGGATTTCATGCCAAGTGATTTTGATGATGGAAAATTCATAGGACCGACTTGACAAACAGTATTGTTAGGTGGCGTTAAATTAATAAGAAGTTTAGCTACTTCTTCGTTTTCCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD144476             [                                                                                                                                                                                                                                                                                                                                                                 TATGAAAGGAAACGAAATGTTGNGCTGTTGAATAATCTGAAAAGCTNTATTGATCACAGCTTCAGTAGTACAGTATACAATTGATATTAGAAAAATTTCGTTGAAAACATTGGACATCAGAAAATGAAAGAATACTTTCCATCGTATTCTCAATCATTTTTCTGGGGATTTCATGCCAAGTGATTTTGATGATGGAAAATTCATAGGACCGACTTGACAAACAGTATTGTTAGGTGGCGTTAAATTAATAAGAAGTTTAGCTACTTCTTCGTTTTCCATGGAATGCGGATTTTGTATATAACGATAGATCATATCTTGTGAGAATCCGCTCTGTTCTAGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD116167             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAAGAATACTTTCCATCGTATTCTCAATCATTTTTCTGGGGATTTCATGCCAAGTGATTTTGATGATGGAAAATTCATAGGACCGACTTGACAAACAGTATTGTTAGGTGGCGTTAAATTAATAAGAAGTTTAGCTACTTCTTCGTTTTCCATGGAATGCGGATTTTGTATATAACGATAGATCATATCTTGTGAGAATCCGCTCTGTTCTAGATGAATAACTAGGCGGGCCAGTTGTTTTGCCTTGAATAGATCATTAGAACAGGTAACTGTAATCAAAAGAGCTGATTGTTCACTAAGCTTATGAGGATTTTGATTAGTTGAGAAAGTTGTCAATAGTGAGTTGAAGATATGAAGAAGATTTAATAAGATCAATTTGTTCTGCTCAAGATTTTGACATGTAAAGGCTCTTTTCT GTAATCCTAA TTCTAAAAGACGACGAGCATGAGAATGAGAAAAACCACAATTTGTTGCCCATGANCACAAACTTTCCAAAAGTTTTATCTGAGAATGATGTGGAACAGGTGTTTCTATGCCGATATTATCGATTNTATACATATCTTGACATTTTTCAGTATTCACANAACTA                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD116200             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAAGAATACTTTCCATCGTATTCTCAATCATTTTTCTGGGGATTTCATGCCAAGTGATTTTGATGATGGAAAATTCATAGGACCGACTTGACAAACAGTATTGTTAGGTGGCGTTAAATTAATAAGAAGTTTAGCTACTTCTTCGTTTTCCATGGAATGCGGATTTTGTATATAACGATAGATCATATCTTGTGAGAATCCGCTCTGTTCTAGATGAATAACTAGGCGGGCCAGTTGTTTTGCCTTGAATAGATCATTAGAACAGGTAACTGTAATCAAAAGAGCTGATTGTTCACTAAGCTTATGAGGATTTTGATTAGTTGAGAAAGTTGTCAATAGTGAGTTGAAGATATGAAGAAGATTTAATAAGATCAATTTGTTCTGCTCAAGATTTTGACATGTAAAGGCTCTTTTCT GTAATCCTAA TTCTAAAAGACGACGAGCATGAGAATGAGAAAAACCACAATTTGTTGCCCATGACAACAAACTTTCCAAAAGTTTTATCTGAGAATGATGTGGAACAGGTGTTTCTATGCCGATATTATCGATTNTATACATATCTTGACATTTTTCAGTATTC                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD079847             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGGATTTCATGCCAAGTGATTTTGATGATGGAAAATTCATAGGACCGACTTGACAAACAGTATTGTTAGGTGGCGTTAAATTAATAAGAAGTTTAGCTACTTCTTCGTTTTCCATGGAATGCGGATTTTGTATATAACGATAGATCATATCTTGTGAGAATCCGCTCTGTTCTAGATGAATAACTAGGCGGGCCAGTTGTTTTGCCTTGAATAGATCATTAGAACAGGTAACTGTAATCAAAAGAGCTGATTGTTCACTAAGCTTATGAGGATTTTGATTAGTTGAGAAAGTTGTCAATAGTGAGTTGAAGATATGAAGAAGATTTAATAAGATCAATTTGTTCTGCTCAAGATTTTGACATGTAAAGGCTCTTTTCT GTAATCCTAA TTCTAAAAGACGACGAGCATGAGAATGAGAAAAACCACAATTTGTTGCCCATGACAACAAACTTTCCAAAAGTTTTATCTGAGAATGATGTGGAACAGGTGTTTCTATGCCGATATTATCGATTTTATACATATCTTGACATTTTTCAGTATTCACAAAACTAGTTTGTTCAGCGATACCACCGAAGGCTTGAGGTTGATTGGTGGAGGCAATCGACTTTATGCAT                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD080405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ctTCTTTTCTGGTAATCCTAATTTCTAAAAGACGACGAGCATGAGAATGAGAAAAACCACAATTTGTTGCCCATGACAACAAACTTTCCAAAAGTTTTATCTGAGAATGATGTGGAACAGGTGTTTCTATGCCGATATTATCGATTTTATACATATCTTGACATTTTTCAGTATTCACAAAACTAGTTTGTTCAGCGATACCACCGAAGGCTTGAGGTTGATTGGTGGAGGCAATCGACTTTATGCTATATGGAACACAGGAGTTTAAAAATGGCCTAGGCAATTTTGTAGATTTTGTCGATGCATTTCCATATCCAGATGAATTATGAAGGCCATTTGAGATAGCTACATCTTGTGCACATCCTTGAGCTTTATGATTATTTATGAAACAAGATTTGTTTTGAAATGAATTAGCTGTTTCTGGAAATTTGCAAGAATCGTGTTTGTTTTCTGAACTAGAAAGAGGAGGATAACTCTTTTTTTTTGAATTTACGGAGTGAGCATTAGCCTCGTGCCGAATNTTGGCCTNGAG]


>consensus_10316#0 AAATTCGTTAAGGAAAGATATTTTAGGAAATGTTTGAACAAGTTTATTTTGGAAAATAAG CATCTGTGAATTATCTAAAAACAGAAAATATCAAACAACTGCCAGCTGGTAGTTAGTTAT GAGTTAATTACAAAAGATTTCATGTATGTAATAGAGAAAATGAGTAAACGCACAAAGCTT CTTAGTCTTTATTACTATGAGCTCAATACAAACCTGAGAAAAGGTAAAGTCAAACTGACA AAAAGAATTGATTGAAATGAGCTGTTCTTCTTATATCTGTTGTTCTTATCATCATTACTA TTTATTATCTGCAAACATAATGGGAATATAATATTAAACTAGTACAGACATTATATGAAA GGAAACGAAATGTTTGGCTGTTGAATAATCTGAAAAGCTTTATTGATCACAGCTTCAGTA GTACAGTATACAATTGATTAGAAAAATTTCGTTGAAAACATTGGACATCAGAAAATGAAA GAATACTTTCCATCGTATTCTCAATCATTTTTCTGGGGATTTCATGCCAAGTGATTTTGA TGATGGAAAATTCATAGGACCGACTTGACAAACAGTATTGTTAGGTGGCGTTAAATTAAT AAGAAGTTTAGCTACTTCTTCGTTTTCCATGGAATGCGGATTTTGTATATAACGATAGAT CATATCTTGTGAGAATCCGCTCTGTTCTAGATGAATAACTAGGCGGGCCAGTTGTTTTGC CTTGAATAGATCATTAGAACAGGTAACTGTAATCAAAAGAGCTGATTGTTCACTAAGCTT ATGAGGATTTTGATTAGTTGAGAAAGTTGTCAATAGTGAGTTGAAGATATGAAGAAGATT TAATAAGATCAATTTGTTCTGCTCAAGATTTTGACATGTAAAGGCTCTTTTCTGTAATCC TAATTCTAAAAGACGACGAGCATGAGAATGAGAAAAACCACAATTTGTTGCCCATGACAA CAAACTTTCCAAAAGTTTTATCTGAGAATGATGTGGAACAGGTGTTTCTATGCCGATATT ATCGATTNTATACATATCTTGACATTTTTCAGTATTCACAAAACTAGTTTGTTCAGCGAT ACCACCGAAGGCTTGAGGTTGATTGGTGGAGGCAATCGACTTTATGCATTATGGAACACA GGAGTTTAAAAATGGCCTAGGCAATTTTGTAGATTTTGTCGATGCATTTCCATATCCAGA TGAATTATGAAGGCCATTTGAGATAGCTACATCTTGTGCACATCCTTGAGCTTTATGATT ATTTATGAAACAAGATTTGTTTTGAAATGAATTAGCTGTTTCTGGAAATTTGCAAGAATC GTGTTTGTTTTCTGAACTAGAAAGAGGAGGATAACTCTTTTTTTTTGAATTTACGGAGTG AGCATTAGCCTCGTGCCGAATNTTGGCCTNGAG



consensusID : consensus_10316#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 915
fasta sequence
                              [GGCCTAGGCAATTTTGTAGATTTTGTCGATGCATTTCCATATCCAGATGAATTATGAAGGCCATTTGAGATAGCTACATCTTGTGCACATCCTTGAGCTTTATGATTATTTATGAAACAAGATTTGTTTTGAAATGAATTAGCTGTTTCTGGAAATTTGCAAGAATCGTGTTTGTTTTCTGAACTAGAAAGAGGAGGATAACTCTTTTTTTTTGAATTTACGGAGTGAGCATTAGAACAGTTGGTGACAGATGAAACTTCATTATCA-TTGCTTATTATATCCTTAGTTGTCGGATGATAAGCTTGTAGTTGACAGGAGCTAGAAATGGAGTCATGCATTAAAATTTGCTTAAGTTCCTCAAGCTCATTTATTGTTTTGAGTTCAGTCATCGTGAATGGGTCGTCAGGTTGGATATCAAAATCTTTTAAGTATGTACAAATTGTGGAACTAGTAGAAGAGTTTGGTTTCATATGAATCAACTCTGAACTAGAACATTCAGGGTTATTACTCGAAATCTTCATCTGCTCTGATTTACATGGTTGGCTAGAAGCTCCACTATCTATTATGCTAGGTTCCAAAATCTTCCCGGAGACAAGATGACTAGCAGCAGGTGGAGGTGTCCCAATAACCGAGTCTGGACACGAATTGTTTGAAGAAAGTGACTGAGGTTTGGAGAAATGAGAACTCCGCGATAATTCGATGCCTTGTTTATTGTTTTCCTGTAATGGGTTTGACTGACCTAGTGGAATTCCACACACTGATGTGGAAAGTGTTTCATCCAAATTTTTCTTTGCTTTGAAATATTCATCATAATCAGCAATAACCTGCTTTTCGTGTAAAAAATCATACTCAAAATCCGATGACGAAATTTCATTTAAAGTTGGCAGGTCACTGATGGTGGGCACTTTCACTTTG]

[-] EMBL CD129575             [GGCCTAGGCAATTTTGTAGATTTTGTCGATGCATTTCCATATCCAGATGAATTATGAAGGCCATTTGAGATAGCTACATCTTGTGCACATCCTTGAGCTTTATGATTATTTATGAAACAAGATTTGTTTTGAAATGAATTAGCTGTTTCTGGAAATTTGCAAGAATCGTGTTTGTTTTCTGAACTAGAAAGAGGAGGATAACTCTTTTTTTTTGAATTTACGGAGTGAGCATTAGAACAGTTGGTGACAGATGAAACTTCATTATCA TTGCTTATTATATCCTTAGTTGTCGGATGATAAGCTTGTAGTTGACAGGAGCTAGAAATGGAGTCATGCATTAAAATTTGCTTAAGTTCCTCAAGCTCATTTATTGTTTTGAGTTCAGTCATCGTGAATGGGTCGTCAGGTTGGATATCAAAATCTTTTAAGTATGTACAAATTGTGGAACTAGTAGAAGAGTTTGGTTTCATATGAATCAACTCTGAACTAGAACATTCAGGGTTATTACTCGAAATCTT                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD125977             [                            ATGCATTTCCATATCCAGATGAATTATGAAGGCCATTTGAGATAGCTACATCTTGTGCACATCCTTGAGCTTTATGATTATTTATGAAACAAGATTTGTTTTGAAATGAATTAGCTGTTTCTGGAAATTTGCAAGAATCGTGTTTGTTTTCTGAACTAGAAAGAGGAGGATAACTCTTTTTTTTTGAATTTACGGAGTGAGCATTAGAACAGTTGGTGACAGAac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD161162             [                                                                                                                                                                                                                      AATTANCGGAGTGAGCATTAGAACAGTTGGTGACAGATGAAACTTCA TATCATTTGCTTATTATATCCTTAGTTGTCGGATGATAAGCTTGTAGTTGACAGGAACTAGAAATGGAGTCATGCATTAAAATTTGCTTAAGTTCCTCAAGCTCATTTATTGTTTTGAGTTCAGTCATCGTGAATGGGTCGTCAGGTTGGATATCAAAATCTTTTAAGTATGTACAAATTGCGGAACTAGTAGAAGAGTTTGGTTTCATATGAATCAACTCTGAACTAGAACATTCAGGGTTATTACTCGAAATCTTCATCTGCTCTGATTTACATGGTTGGCTAGAAGCTCCACTATCTATTATGCTAGGTTCCAAAATCTTCCCGGAGACAAGATGACTAGCAGCAGGTGGAGGTGTCCCAATAACCGAGTCTGGACACGAATTGTTTGAAGAAAGTGACTGAGGTTTGGAGAAATGAGAACTCCGCGATAATTCGATGCCTTGTTTATTGTTTTCCTGTAATGGGTTTGACTGACCTAGTGGAATTCCACACACTGATGTGGAAAGTGTTTCATCCAAATTTTTCTTTGCTTTGAA                                                                                                                   ]
[+] EMBL CD117735             [                                                                                                                                                                                                                                                                                                                                                                                                                                  AAATCTTTTAAGTATGTACAAATTGTGGAACTAGTAGAAGAGTTTGGTTTCATATGAATCAACTCTGAACTAGAACATTCAGGGTTATTACTCGAAATCTTCATCTGCTCTGATTTACATGGTTGGCTAGAAGCTCCACTATCTATTATGCTAGGTTCCAAAATCTTCCCGGAGACAAGATGAC AGCAGCAGGTGGAGGTGTCCCAATAACCGAGTCTGGACACGAATTGTTTGAAGAAAGTGACTGAGGTTTGGAGAAATGAGAACTCCGCGATAATTCGATGCCTTGTTTATTGTTTTCCTGTAATGGGTTTGACTGACCTAGTGGAATTCCACACACTGATGTGGAAAGTGTTTCATCCAAATTTTTCTTTGCTTTGAAATATTCATCATAATCAGCAATAACCTGCTTTTCGTGTAAAAAATCATACTCAAAATCCGATGACGAAATTTCATTTAAAGTTGGCAGGTCACTGATGGTGGGCACT         ]
[-] EMBL CD116653             [                                                                                                                                                                                                                                                                                                                                                                                                                                   AATCTTTTAAGTATGTACAAATTGTGGAACTAGTAGAAGAGTTTGGTTTCATATGAATCAACTCTGAACTAGAACATTCAGGGTTATTACTCGAAATCTTCATCTGCTCTGATTTACATGGTTGGCTAGAAGCTCCACTATCTATTATGCTAGGTTCCAAAATCTTCCCGGAGACAAGATGACTAGCAGCAGGTGGAGGTGTCCCAATAACCGAGTCTGGACACGAATTGTTTGAAGAAAGTGACTGAGGTTTGGAGAAATGAGAACTCCGCGATAATTCGATGCCTTGTTTATTGTTTTCCTGTAATGGGTTTGACTGACCTAGTGGAATTCCACACACTGATGTGGAAAGTGTTTCATCCAAATTTTTCTTTGCTTTGAAATATTCATCATAATCAGCAATAACCTGCTTTTCGTGTAAAAAATCATACTCAAAATCCGATGACGAAATTTCATTTAAAGTTGGCAGGTCACTGATGGTGGGCACTT        ]
[+] EMBL CD091719             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCCACTATCTATTATGCTAGGTTCCAAAATCTTCCCGGAGACAAGATGACTAGCAGCAGGTGGAGGTGTCCCAATAACCGAGTCTGGACACGAATTGTTTGAAGAAAGTGACTGAGGTTTGGAGAAATGAGAACTCCGCGATAATTCGATGCCTTGTTTATTGTTTTCCTGTAATGGGTTTGACTGACCTAGTGGAATTCCACACACTGATGTGGAAAGTGTTTCATCCAAATTTTTCTTTGCTTTGAAATATTCATCATAATCAGCAATAACCTGCTTTTCGTGTAAAAAATCATACTCAAAATCCGATGACGAAATTTCATTTAAAGTTGGCAGGTCACTGATGGTGGGCACTTTCACTTTG]


>consensus_10316#1 GGCCTAGGCAATTTTGTAGATTTTGTCGATGCATTTCCATATCCAGATGAATTATGAAGG CCATTTGAGATAGCTACATCTTGTGCACATCCTTGAGCTTTATGATTATTTATGAAACAA GATTTGTTTTGAAATGAATTAGCTGTTTCTGGAAATTTGCAAGAATCGTGTTTGTTTTCT GAACTAGAAAGAGGAGGATAACTCTTTTTTTTTGAATTTACGGAGTGAGCATTAGAACAG TTGGTGACAGATGAAACTTCATTATCATTGCTTATTATATCCTTAGTTGTCGGATGATAA GCTTGTAGTTGACAGGAGCTAGAAATGGAGTCATGCATTAAAATTTGCTTAAGTTCCTCA AGCTCATTTATTGTTTTGAGTTCAGTCATCGTGAATGGGTCGTCAGGTTGGATATCAAAA TCTTTTAAGTATGTACAAATTGTGGAACTAGTAGAAGAGTTTGGTTTCATATGAATCAAC TCTGAACTAGAACATTCAGGGTTATTACTCGAAATCTTCATCTGCTCTGATTTACATGGT TGGCTAGAAGCTCCACTATCTATTATGCTAGGTTCCAAAATCTTCCCGGAGACAAGATGA CTAGCAGCAGGTGGAGGTGTCCCAATAACCGAGTCTGGACACGAATTGTTTGAAGAAAGT GACTGAGGTTTGGAGAAATGAGAACTCCGCGATAATTCGATGCCTTGTTTATTGTTTTCC TGTAATGGGTTTGACTGACCTAGTGGAATTCCACACACTGATGTGGAAAGTGTTTCATCC AAATTTTTCTTTGCTTTGAAATATTCATCATAATCAGCAATAACCTGCTTTTCGTGTAAA AAATCATACTCAAAATCCGATGACGAAATTTCATTTAAAGTTGGCAGGTCACTGATGGTG GGCACTTTCACTTTG



consensusID : consensus_10316#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 353
fasta sequence
                              [AGTCAAACCCATTACAGGAAAACAATAAACAAGGCATCGAATTATCGCGGAGTTCTCATTTCTCCAAACCTCAGTCACTTTCTTCAAACAATTCGTGTCCAGACTCGGTTATTGGGACACCTCCACCTGCTGCTAGTCATCTTGTCTCCGGGAAGATTTTGGAACCTAGCATAATAGATAGTGGAGCTTCTAGCCAACCATGTAAATCAGAGCAGATGAAGATTGCGAGTAATAACCCTGAATGTTCTAGTTCAGAGTTGATTCATATGAAACCAAACTCTTCTACTAGTTCCACAATTTGTACATACTTAAAAGATTTTGATATCCAACCTGACGATCCCCCATCTATCACA]

[+] EMBL BG931266             [AGTCAAACCCATTACAGGAAAACAATAAACAAGGCATCGAATTATCGCGGAGTTCTCATTTCTCCAAACCTCAGTCACTTTCTTCAAACAATTCGTGTCCAGACTCGGTTATTGGGACACCTCCACCTGCTGCTAGTCATCTTGTCTCCGGGAAGATTTTGGAACCTAGCATAATAGATAGTGGAGCTTCTAGCCAACCATGTAAATCAGAGCAGATGAAGATTGCGAGTAATAACCCTGAATGTTCTAGTTCAGAGTTGATTCATATGAAACCAAACTCTTCTACTAGTTCCACAATTTGTACATACTTAAAAGATTTTGATATCCAACCTGACGATCCCCCATCTATCACA]
[+] EMBL CD116954             [        CCATTACAGGAAAACAATAAACAAGGCATCGAATTATCGCGGAGTTCTCATTTCTCCAAACCTCAGTCACTTTCTTCAAACAATTCGTGTCCAGACTCGGTTATTGGGACACCTCCACCTGCTGCTAGTCATCTTGTCTCCGGGA                                                                                                                                                                                                        ]


>consensus_10316#2 AGTCAAACCCATTACAGGAAAACAATAAACAAGGCATCGAATTATCGCGGAGTTCTCATT TCTCCAAACCTCAGTCACTTTCTTCAAACAATTCGTGTCCAGACTCGGTTATTGGGACAC CTCCACCTGCTGCTAGTCATCTTGTCTCCGGGAAGATTTTGGAACCTAGCATAATAGATA GTGGAGCTTCTAGCCAACCATGTAAATCAGAGCAGATGAAGATTGCGAGTAATAACCCTG AATGTTCTAGTTCAGAGTTGATTCATATGAAACCAAACTCTTCTACTAGTTCCACAATTT GTACATACTTAAAAGATTTTGATATCCAACCTGACGATCCCCCATCTATCACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10316#0      AAATTCGTTAAGGAAAGATATTTTAGGAAATGTTTGAACAAGTTTATTTTGGAAAATAAG 60
consensus_10316#1      ------------------------------------------------------------
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      CATCTGTGAATTATCTAAAAACAGAAAATATCAAACAACTGCCAGCTGGTAGTTAGTTAT 120
consensus_10316#1      -------------------------------------------------------GGCCT 5
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      GAGTTAATTACAAAAGATTTCATGTATGTAATAGAGAAAATGAGTAAACGCACAAAGCTT 180
consensus_10316#1      AGGCAATTTT--GTAGATTTTGTCGATGCATTTCCATATCCAGATGAATTATGAAGGCCA 63
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      CTTAGTCTTTATTACTATGAGCTCAATACAAACCTGAGAAAAGGTAAAGTCAAACTGACA 240
consensus_10316#1      TTTGAG----ATAGCTACATCTTGTGCACATCCTTGAGCTT---TATGATTATTTATGAA 116
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      AAAAGAATTGATT-GAAATGAGCTGTTCTTCTTATATCTGTTGTTCTTATCATCATTACT 299
consensus_10316#1      ACAAGATTTGTTTTGAAATGAATTAGC-------TGTTTCTGGAAATTTGCAAGAATCGT 169
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      ATTTATTATCTGCAAACATAATGGGAATATAATATTAAACTAGTACAGACATTATATGAA 359
consensus_10316#1      GTTTGTTTTCTGAACTAGAAAGAGGAGGATAACTCT---TTTTTTTTGAATTTACGGAGT 226
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      AGGAAACGAAATGTTTGGCTGTTGAATAATCTGAAAAGCTTTATTGATCACAGCTTCAGT 419
consensus_10316#1      GAGCATTAGAACAGTTGG-TGACAGATGA-------AACTTCATT-ATCATTGCTT-ATT 276
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      AGTACAGTATACAATTGATTAGAAAAATTTCGTTGAAAACA-TTGGACATCAGAAAATGA 478
consensus_10316#1      ATATCCTTAGTTGTCGGATGATAAGCTTGTAGTTGACAGGAGCTAGAAATGGAGTCATGC 336
consensus_10316#2      -------AGTCAAACCCATTACAGGAAAACAATAAACAAGGCATCGAATT---ATCGCGG 50
                                        ** * *         *  * *     * **  *        * 

consensus_10316#0      AAGAATACTTTCCATCGTATTCTCAATCATTTTTCTGGGG-ATTTCATGCCAAGTGATTT 537
consensus_10316#1      ATTAAAATTTGCTTAAGT-TCCTCAAGCTCATTTATTG----TTTTGAGTTCAGTCATCG 391
consensus_10316#2      AGTTCTCATTTCTCCAAA--CCTCAGTCACTTTCTTCAAACAATTCGTGTCCAGACTCGG 108
                       *       ** *         ****  *   **  *       **   *   **      

consensus_10316#0      TGATGATGGAAAATTCATAGGACCGACTTGACAAACAGTATTGT---TAGGTGGCGTTAA 594
consensus_10316#1      TGA--ATGGGTCGTC---AGGTTGGATATCAAAATCTTTTAAGTATGTACAAATTGTGGA 446
consensus_10316#2      TTAT--TGGGACACC--TCCACCTGCTGCTAGTCATCTTGTCTCCGGGAAGATTTTGGAA 164
                       * *   ***               *     *       *         *          *

consensus_10316#0      ATTAATAAGA-AGTTTAGCTACTTCTTCGTTTTCCATGGAATGCGGATTTTGTATATAAC 653
consensus_10316#1      ACTAGTAGAAGAGTTTGGTTTCATATGAATCAACTCTGAACTAGAACATTCAGGGTTATT 506
consensus_10316#2      CCTAGCATAATAGATAGTGGAGCTTCTAGCCAACCATGTAAATCAGAGCAGATGAAGATT 224
                         **  *  * ** *        *         *  ** *                 *  

consensus_10316#0      GATAGATCATATCTTGTGAGAATCCGCTCTGTTCTAGA-TGAATAACTAGGCGGGCCAGT 712
consensus_10316#1      ACTCG---AAATCTTC-----ATCTGCTCTGATTTACA-TGGTTGGCTAGAAGCTCCACT 557
consensus_10316#2      GCGAGTAATAACCCTG------AATGTTCTAGTTCAGAGTTGATTCATATGAAACCAAAC 278
                           *     * * *          * ***  *  * * *   *   **      * *  

consensus_10316#0      TGTTTTGCCTTGAATAGATCATTAGAACAGGTAACTGTAATCAAAAGAGCTGATTGTTCA 772
consensus_10316#1      A--TCTATTATGC-TAGGTTCCAAAATC---TTCCCGGAGACAAGATGACTAG-----CA 606
consensus_10316#2      TCTTCTACTA-------GTTCCACAATT---TGTACATACTTAAAAGATTTTGATATCCA 328
                          * *            *      *     *      *   ** *    *       **

consensus_10316#0      CTAAGCTTATGAGGATTTTGATTAGTTGAGAAAGTTGTCAATAGTGAGTTGAAGATA-TG 831
consensus_10316#1      GCAGGTG---GAGGTGTCCCAATAACCGAGTCTG--GACACGAATTGTTTGAAGAAAGTG 661
consensus_10316#2      ACCTGAC-----GATCCCCCATCTATCACA------------------------------ 353
                           *       *       *                                       

consensus_10316#0      AAGAAGATTTAATAAGATCAATTTGTTCTGCTCAAGATTTTGACATGTAAAGGCTCTTTT 891
consensus_10316#1      ACTGAGGTTTGGAGAAATGA----GAACTCCGCGATAATTCGATGCCT------TGTTTA 711
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      CTGTAATCCTAATTCTAAAAGACGACGAGCATGAGAATGAGAAAAACCACAATTTGTTGC 951
consensus_10316#1      TTGTTTTCCTG----TAATGGGTTT---GACTGACCTAGTGGAATTCCACACACTGATG- 763
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      CCATGACAACAAACTTTCCAAAAGTTTTATCTGAGAATGATGTGGAACAGGTGTTTCTAT 1011
consensus_10316#1      ---TGGAAAGTGTTTCATCCAAATTTTTCTTTGC------TTTGAAATA--------TTC 806
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      GCCGATATTATCGATTNTATACATATCTTGACATTTTTCAGTATTCACAAAACTAGTTTG 1071
consensus_10316#1      ATCATAATCAGCAATAACCTGCTTTTCGTGTAAAAAATC---ATACTCAAAATCCGATGA 863
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      TTCAGCGATACCACCGAAGGCTTGAGGTTGATTGGTGGAGGCAATCGACTTTATGCATTA 1131
consensus_10316#1      C---GAAATTTCATTTAAAGTTGGCAGGTCACTGATGGTGGGCACTTTCACTTTG----- 915
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      TGGAACACAGGAGTTTAAAAATGGCCTAGGCAATTTTGTAGATTTTGTCGATGCATTTCC 1191
consensus_10316#1      ------------------------------------------------------------
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      ATATCCAGATGAATTATGAAGGCCATTTGAGATAGCTACATCTTGTGCACATCCTTGAGC 1251
consensus_10316#1      ------------------------------------------------------------
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      TTTATGATTATTTATGAAACAAGATTTGTTTTGAAATGAATTAGCTGTTTCTGGAAATTT 1311
consensus_10316#1      ------------------------------------------------------------
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      GCAAGAATCGTGTTTGTTTTCTGAACTAGAAAGAGGAGGATAACTCTTTTTTTTTGAATT 1371
consensus_10316#1      ------------------------------------------------------------
consensus_10316#2      ------------------------------------------------------------
                                                                                   

consensus_10316#0      TACGGAGTGAGCATTAGCCTCGTGCCGAATNTTGGCCTNGAG 1413
consensus_10316#1      ------------------------------------------
consensus_10316#2      ------------------------------------------
                                                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)