cluster # 10317

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Schistosoma mansoni
cluster # 10317 cluster # 10317 Sequences # 15 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10317#0 length = 1307 sequences # 10

consensus_10317#1 length = 512 sequences # 3
consensus_10317#2 length = 474 sequences # 2

consensusID : consensus_10317#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1307
fasta sequence

                              [TATTGCGAGAATGCGGTTGGAGACCATCGTGACTGAATCGTCCAAAAAGCCGATGAGTAATTCCGTCAATTTCATTAGTGGCTGGAATGCGGTGGTCACCTCTACGCATTTTGCTGCCCAATGGAGCTGAACTTGCAGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGAATATGGTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGGATGGTGGTGTATCCATGGGTGTAGACTGTATCGGTGGCTGCTTGCGGCGTCGAGAACCAACGCCTTGAGAAGAATTAGAAGGATTCCTGCTACGGGAAGCGTTCATTCCAGCACATTGTCTTAACTTACATTTCTGACGCATTTTGTTGGGGCCGCCGAATTTTCTTCTATCCCTACAATATTCACATTTTCCGCAATCTTCTTGTATGCTGCAGCCTGTGCAATTACCGCAAGGGCGTAAACGAGGGGATCCAGACCGCTTTCTGGAGACAAATGTACTAGATAATTTTTGATCTTCCCCAAATCCAGATTGCTCTTCTCGTCCCCAGTATACGCGATTATACACAGCTGAAGTACTTGAATCTGAGGCATTGGGTGATCTAGGAGACGTGTCAGGACCAGGAGAATTGAATTTGCGCATATTTCTGGGCGGTAAATGTAATGTGTGGTCGATTGGAGTAGTACGAGTACCAGTTTCTGATTTACTGACGGGGGGATCTGGTTTTCGTTTTCCCTTGAACTGTTTACCTGATGGGAGTTGGTCCGGATAGGTACTGACATCGTTATTAGGACTTAAACTCGGACGATTTTGTCTCGGTCTCTGACTTCTGGTGTTCTTATACTCGATCTCCAGAGACGGATTCCTACATCGACATTGAGGACAGTAAAAAGTTTTTATTTGCTCTGCTTGCTTAGGAGTGACATTAATACAATCTCCGTGATACCATTCTTCGCATTGGTCACATGCTCTACATACTTATTACCATTCCTATAAACAACTCACATCATGAATCGTTCAGCGTCTGAAGAACGACAGACACAATAGACTTCACTCATCTTTTTATCAAACTCCTCATTCACAGTTTTTTTTTACCATTATTCTTACGCCGCTTTTGCATACTTGGTGGTTAGTTTGGCGAATAGACAAGGTCAGCANACAACTTTGAAGTTTACCACTTATCAAGTTTCATACTACAACACGGCATATGCAAGAAGGAATTTATAAGACGCCACTAAGTGAAAAAACTACTTCAATTCCTCCTATTAGCGGAATTTTT]

[-] EMBL CD182127             [TATTGCGAGAATGCGGTTGGAGACCATCGTGACTGAATCGTCCAAAAAGCCGATGAGTAATTCCGTCAATTTCATTAGTGGCTGGAATGCGGTGGTCACCTCTACGCATTTTGCTGCCCAATGGAGCTGAACTTGCAGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGAATATGGTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD180392             [                                                                                                                                                                       TTATCAGAATATGGTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGGATGGTGGTGTATCCATGGGTGTAGACTGTATCGGTGGCTGCTTGCGGCGTCGAGAACCAACGCCTTGAGAAGAATTAGAAGGATTCCTGCTACGGGAAGCGTTCATTCCAGCACATTGTCTTAACTTACATTTCTGACGCATTTTGTTGGGGCCGCCGAATTTTCTTCTATCCCTACAATATTCACATTTTCCGCAATCTTCTTGTATGCTGCAGCCTGTGCAATTACCGCAAGGGCGTAAACGAGGGGATCCAGACCGCTTTCTGGAGACAAATGTACTAGATAATTTTTGATCTTCCCCAAATCCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD180450             [                                                                                                                                                                       TTATCAGAATATGGTCGTGGGGAAAAATCCAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGGATGGTGGTGTATCCATGGGTGTAGACTGTATCGGTGGCTGCTTGCGGCGTCGAGAACCAACGCCTTGAGAAGAATTAGAAGGATTCCTGCTACGGGAAGCGTTCATTCCAGCACATTGTCTTAACCTACATTTCTGACGCATTTTGTTGGGGCCGCCGAATTTTCTTCTATCCCTACAATATTCACATTTTCCGCAATCTTCTTGTATGCTGCAGCCTGTGCAATTACCGCAAGGGCGTAAACGAGGGGATCCAGACCGCTTTCTGGAGACAAATGTACTAGATAATTTTTGATCTTCCCCAAATCCAGATTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD180395             [                                                                                                                                                                       TTATCAGAATATGGTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGGATGGTGGTGTATCCATGGGTGTAGACTGTATCGGTGGCTGCTTGCGGCGTCGAGAACCAACGCCTTGAGAAGAATTAGAAGGATTCCTGCTACGTGAAGCGTTCATTCCAGCACATTGTCTTAACTTACATTTCTGACGCATTTTGTTGGGGCCGCCGAATTTTCTTCTATCCCTACAATATTCACATTTTCCGCAATCTTCTTGTATGCTGCAGCCTGTGCAATTACCGCAAGGGCGTAAACGAGGGGATCCAGACCGCTTTCTGGAGACAAATGTACTAGATAATTTTTGATCTTCCCCAAATCCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD121853             [                                                                                                                                                                                                                                                                                                         GTCGAGAACCAACGCCTTGAGAAGAATTAGAAGGATTCCTGCTACGGGAAGCGTTCATTCCAGCACATTGTCTTAACTTACATTTCTGACGCATTTTGTTGGGGCCGCCGAATTTTCTTCTATCCCTACAATATTCACATTTTCCGCAATCTTCTTGTATGCTGCAGCCTGTGCAATTACCGCAAGGGCGTAAACGAGGGGATCCAGACCGCTTTCTGGAGACAAATGTACTAGATAATTTTTGATCTTCCCCAAATCCAGATTGCTCTTCTCGTCCCCAGTATACGCGATTATACACAGCTGAAGTACTTGAATCTGAGGCATTGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD190693             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCCTGTGCAATTACCGCAAGGGCGTAAACGAGGGGATCCAGACCGCTTTCTGGAGACAAATGTACTAGATAATTTTTGATCTTCCCCAAATCCAGATTGCTCTTCTCGTCCCCAGTATACGCGATTATACACAGCTGAAGTACTTGAATCTGAGGCATTGGGTGATCTAGGAGACGTGTCAGGACCAGGAGAATTGAATTTGCGCATATTTCTGGGCGGTAAATGTAATGTGTGGTCGATTGGAGTAGTACGAGTACCAGTTTCTGATTTACTGACGGGGGGATCTGGTTTTCGTTTTCCCTTGAACTGTTTACCTGATGGGAGTTGGTCCGGATAGGTTCTGACATCGTTATTAGGACTTAAACTCGGACGATTTTGTCTCGGTCTCTGACTTCTGGTGTTCTTATACTCGATCTCCAGAGACGGATTCCTACATCG                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD189131             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TAATGTGTGGTCGATTGGAGTAGTACGAGTACCAGTTTCTGATTTACTGACGGGGGGATCTGGTTTTCGTTTTCCCTTGAACTGTTTACCTGATGGGAGTTGGTCCGGATAGGTACTGACATCGTTATTAGGACTTAAACTCGGACGATTTTGTCTCGGTCTCTGACTTCTGGTGTTCTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD155642             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACCAGTTTCTGATTTACTGACGGGGGGATCTGGTTTTCGTTTTCCCTTGAACTGTTTACCTGATGGGAGTTGGTCCGGATAGGTACTGACATCGTTATTAGGACTTAAACTCGGACGATTTTGTCTCGGTCTCTGACTTCTGGTGTTCTTATACTCGATCTCCAGAGACGGATTCCTACATCGACATTGAGGACAGTAAAAAGTTTTT                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD092837             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TACTGACGGGGGGATCTGGTTTTCGTTTTCCCTTGAACTGTTTACCTGATGGGAGTTGGTCCGGATAGGTACTGACATCGTTATTAGGACTTAAACTCGGACGATTTTGTCTCGGTCTCTGACTTCTGGTGTTCTTATACTCGATCTCCAGAGACGGATTCCTACATCGACATTGAGGACAGTAAAAAGTTTTTATTTGCTCTGCTTGCTTAGGAGTGACATTAATACAATCTCCGTGATACCATTCTTCGCATTGGTCACATGCTCTACATACTTATTACCATTCCTATAAACAACTCACATCATGAATCGTTCAGCGTCTGAAGAACGACAGACACAATAGACTTCACTCATCTTTTTATCAAACTCCTCATTCACAGTTTTTTTTTACCATTATTCTTACGCCGCTTTTGCATACTTGGTGGTTAGTTTGGCGAATAGACAAGGTCAGCANACAACTTTGAAGTTTACCACTTATCAAGTTTCATACTACAACACGGCATATGCAAGAAGGAATTTATAAGACGCCACTAAGTGAAAAAACTACTTCAATTCCTCCTATTAGCGGAATTTTT]
[-] EMBL CD201717             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTCCCCTGAACTGTTTACCTGATGGGAGTTGGTCCGGATAGGTACTGACATCGTTATTAGGACTTAAACTCGGACGATTTTGTCTCGGTCTCTGACTTCTGGTGTTCTTATACTCGATCTCCAGAGACGGATTCCTAC                                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_10317#0
TATTGCGAGAATGCGGTTGGAGACCATCGTGACTGAATCGTCCAAAAAGCCGATGAGTAA
TTCCGTCAATTTCATTAGTGGCTGGAATGCGGTGGTCACCTCTACGCATTTTGCTGCCCA
ATGGAGCTGAACTTGCAGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGAATATG
GTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACT
GCATATGGGATGGTGGTGTATCCATGGGTGTAGACTGTATCGGTGGCTGCTTGCGGCGTC
GAGAACCAACGCCTTGAGAAGAATTAGAAGGATTCCTGCTACGGGAAGCGTTCATTCCAG
CACATTGTCTTAACTTACATTTCTGACGCATTTTGTTGGGGCCGCCGAATTTTCTTCTAT
CCCTACAATATTCACATTTTCCGCAATCTTCTTGTATGCTGCAGCCTGTGCAATTACCGC
AAGGGCGTAAACGAGGGGATCCAGACCGCTTTCTGGAGACAAATGTACTAGATAATTTTT
GATCTTCCCCAAATCCAGATTGCTCTTCTCGTCCCCAGTATACGCGATTATACACAGCTG
AAGTACTTGAATCTGAGGCATTGGGTGATCTAGGAGACGTGTCAGGACCAGGAGAATTGA
ATTTGCGCATATTTCTGGGCGGTAAATGTAATGTGTGGTCGATTGGAGTAGTACGAGTAC
CAGTTTCTGATTTACTGACGGGGGGATCTGGTTTTCGTTTTCCCTTGAACTGTTTACCTG
ATGGGAGTTGGTCCGGATAGGTACTGACATCGTTATTAGGACTTAAACTCGGACGATTTT
GTCTCGGTCTCTGACTTCTGGTGTTCTTATACTCGATCTCCAGAGACGGATTCCTACATC
GACATTGAGGACAGTAAAAAGTTTTTATTTGCTCTGCTTGCTTAGGAGTGACATTAATAC
AATCTCCGTGATACCATTCTTCGCATTGGTCACATGCTCTACATACTTATTACCATTCCT
ATAAACAACTCACATCATGAATCGTTCAGCGTCTGAAGAACGACAGACACAATAGACTTC
ACTCATCTTTTTATCAAACTCCTCATTCACAGTTTTTTTTTACCATTATTCTTACGCCGC
TTTTGCATACTTGGTGGTTAGTTTGGCGAATAGACAAGGTCAGCANACAACTTTGAAGTT
TACCACTTATCAAGTTTCATACTACAACACGGCATATGCAAGAAGGAATTTATAAGACGC
CACTAAGTGAAAAAACTACTTCAATTCCTCCTATTAGCGGAATTTTT

consensusID : consensus_10317#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 512
fasta sequence

                              [ATTGTGATGGACGGGGGATCTGGTTTTCGTTTTCCCTTGAACTGTTTACCTGATGGGAGTTGGTCCGGATAAGTACTGACATCGTGATTAAGACTTAAACTCGGACGATGGTGTCTCGGTCTCTGACTTCTGGTGTTCTTATACTCGATCTCCAGAGACAGATTCCTACATCGACATTGAGGACAGTAAAAAGTTTTTATTTGCTCTGCTTGCTTAGGAGTGACATTAATACAATCTCCGTGATACCATTCTTCGCATTGGTCACATGCTATCATGAATCGTTCAGCGTCTGAAGAACGACAGACACAATAGACTTCACTCATCTTTTTATCAAACTCCTCATTCACAG-TTTTTTTACCATTATTCTTACGCCGCTTTTGCATACTTGGTGGTTAGTTTGGCGAATAGACAAGGTCAGCAAACAACTTTGAAGTTTACCACTTATCAAGTTTCATACTACAACACGGCATATGCAAGAAGGAATTTATAAGACGCCACTAAGTGAAAAAACT]

[+] EMBL BG931117             [ATTGTGATGGACGGGGGATCTGGTTTTCGTTTTCCCTTGAACTGTTTACCTGATGGGAGTTGGTCCGGATAAGTACTGACATCGTGATTAAGACTTAAACTCGGACGATGGTGTCTCGGTCTCTGACTTCTGGTGTTCTTATACTCGATCTCCAGAGACAGATTCCTACATCGACATTGAGGACAGTAAAAAGTTTTTATTTGCTCTGCTTGCTTAGGAGTGACATTAATACAATCTCCGTGATACCATTCTTCGCATTGGTCACATGCTATCATGAATCGTTCAGCGTCTGAAGAACGACAGACACAATAGACTTCACTCATCTTTATATCAAACTCCTCATTCACAG TTTTTATACCATTATGCTTACGCCGCTTTTG                                                                                                                                    ]
[-] EMBL CD192096             [                                                                                             CTTAAACTCGGACGATTTTGTCTCGGTCTCTGACTTCTGGTGTTCTTATACTCGATCTCCAGAGACGGATTCTTACATCGACATTGAGGACAGTAAAAAGTTTTTATTTGCTCTGCTTGCTTAGGAGTGACATTAATACAATCTCCGTGATACCATTCTTCGCATTGGTCACATGCTATCATGAATCGTTCAGCGTCTGAAGAACGACAGACACAATAGACTTCACTCATCTTTTTATCAAACTCCTCATTCACAG TTTTTTTACCATTATTCTTACGCCGCTTTCGCATACTTGGTGGTTAGTTTGGCGAATAGACAAGGTCAGCAAACAACTTTGAAGTTTACCACTTATCAAGTTTCATACTACAACACGGCATATGCAAGAAGGAATTTATAAGACGC                 ]
[+] EMBL CD155764             [                                                                                                                                                                                                                                     TACAATCTCCGTGATACCATTCTTCGCATTGGTCACATGCTATCATGAATCGTTCAGCGTCTGAAGAACGACAGACACAATAGACTTCACTCATCTTTTTATCAAACTCCTCATTCACAGTTTTTTTTACCATTATTCTTACGCCGCTTTTGCATACTTGGTGGTTAGTTTGGCGAATAGACAAGGTCAGCAAACAACTTTGAAGTTTACCACTTATCAAGTTTCATACTACAACACGGCATATGCAAGAAGGAATTTATAAGACGCCACTAAGTGAAAAAACT]




>consensus_10317#1
ATTGTGATGGACGGGGGATCTGGTTTTCGTTTTCCCTTGAACTGTTTACCTGATGGGAGT
TGGTCCGGATAAGTACTGACATCGTGATTAAGACTTAAACTCGGACGATGGTGTCTCGGT
CTCTGACTTCTGGTGTTCTTATACTCGATCTCCAGAGACAGATTCCTACATCGACATTGA
GGACAGTAAAAAGTTTTTATTTGCTCTGCTTGCTTAGGAGTGACATTAATACAATCTCCG
TGATACCATTCTTCGCATTGGTCACATGCTATCATGAATCGTTCAGCGTCTGAAGAACGA
CAGACACAATAGACTTCACTCATCTTTTTATCAAACTCCTCATTCACAGTTTTTTTACCA
TTATTCTTACGCCGCTTTTGCATACTTGGTGGTTAGTTTGGCGAATAGACAAGGTCAGCA
AACAACTTTGAAGTTTACCACTTATCAAGTTTCATACTACAACACGGCATATGCAAGAAG
GAATTTATAAGACGCCACTAAGTGAAAAAACT

consensusID : consensus_10317#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 474
fasta sequence

                              [GCGGTGGTCACCTCTACGCATTTTGCTGCCCAATGGAGCTGAACTTGCAGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGAATATGGTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGGATGGTGGTGTATCCATGGGTGTAGACTGTATCGGTGGCTGCTTGCGGCGTCGAGAACCAACGCCTTGAGAAGAATTAGAAGGATTCCTGCTACGGGAAGCGTTCATTCCAGCACATTGTCTTAACTTACATTTCTGACGCATGGCTGGAATGCGGTGGTCACCTCTACGCATTTTGCTGCCCAATGGAGCTGAACTTGCAGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGAATATGGTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGGA]

[+] EMBL CD093309             [GCGGTGGTCACCTCTACGCATTTTGCTGCCCAATGGAGCTGAACTTGCAGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGAATATGGTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGGATGGTGGTGTATCCATGGGTGTAGACTGTATCGGTGGCTGCTTGCGGCGTCGAGAACCAACGCCTTGAGAAGAATTAGAAGGATTCCTGCTACGGGAAGCGTTCATTCCAGCACATTGTCTTAACTTACATTTCTGACGCATGGCTGGAATGCGGTGGTCACCTCTACGCATTTTGCTGCCCAATGGAGCTGAACTTGCAGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGAATATGGTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGG ]
[-] EMBL CD093244             [ CGGTGGTCACCTCTACGCATTTTGCTGCCCAATGGAGCTGAACTTGCAGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGAATATGGTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGGATGGTGGTGTATCCATGGGTGTAGACTGTATCGGTGGCTGCTTGCGGCGTCGAGAACCAACGCCTTGAGAAGAATTAGAAGGATTCCTGCTACGGGAAGCGTTCATTCCAGCACATTGTCTTAACTTACATTTCTGACGCATGGCTGGAATGCGGTGGTCACCTCTACGCATTTTGCTGCCCAATGGAGCTGAACTTGCAGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGAATATGGTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGGA]




>consensus_10317#2
GCGGTGGTCACCTCTACGCATTTTGCTGCCCAATGGAGCTGAACTTGCAGGGTGATGAGA
CAGGAACGACTGTGTAATATTATCAGAATATGGTCGTGGGGAAAAATCTAACGGCACTTC
GAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGGATGGTGGTGTATCCATGGG
TGTAGACTGTATCGGTGGCTGCTTGCGGCGTCGAGAACCAACGCCTTGAGAAGAATTAGA
AGGATTCCTGCTACGGGAAGCGTTCATTCCAGCACATTGTCTTAACTTACATTTCTGACG
CATGGCTGGAATGCGGTGGTCACCTCTACGCATTTTGCTGCCCAATGGAGCTGAACTTGC
AGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGAATATGGTCGTGGGGAAAAATC
TAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACTGCATATGGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10317#0      TATTGCGAGAATGCGGTTGGAGACCATCGTGACTGAATCGTCCAAAAAGCCGATGAGTAA 60
consensus_10317#1      ------------------------------------------------------------
consensus_10317#2      ------------------------------------------------------------
                                                                                   

consensus_10317#0      TTCCGTCAATTTCATTAGTGGCTGGAATGCGGTGGTCACCTCTACGCATTTTGCTGCCCA 120
consensus_10317#1      ------------------------------------------------------------
consensus_10317#2      ------------------------------------------------------------
                                                                                   

consensus_10317#0      ATGGAGCTGAACTTGCAGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGAATATG 180
consensus_10317#1      ------------------------------------------------------------
consensus_10317#2      ------------------------------------------------------------
                                                                                   

consensus_10317#0      GTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATACGACT 240
consensus_10317#1      ------------------------------------------------------------
consensus_10317#2      ------------------------------------------------------------
                                                                                   

consensus_10317#0      GCATATGGGATGGTGGTGTATCCATGGGTGTAGACTGTATCGGTGGCTGCTTGCGGCGTC 300
consensus_10317#1      ------------------------------------------------------------
consensus_10317#2      ------------------------------------------------------------
                                                                                   

consensus_10317#0      GAGAACCAACGCCTTGAGAAGAATTAGAAGGATTCCTGCTACGGGAAGCGTTCATTCCAG 360
consensus_10317#1      ------------------------------------------------------------
consensus_10317#2      ------------------------------------------------------------
                                                                                   

consensus_10317#0      CACATTGTCTTAACTTACATTTCTGACGCATTTTGTTGGGGCCGCCGAATTTTCTTCTAT 420
consensus_10317#1      ------------------------------------------------------------
consensus_10317#2      ------------------------------------------------------------
                                                                                   

consensus_10317#0      CCCTACAATATTCACATTTTCCGCAATCTTCTTGTATGCTGCAGCCTGTGCAATTACCGC 480
consensus_10317#1      ------------------------------------------------------------
consensus_10317#2      ------------------------------------------------------------
                                                                                   

consensus_10317#0      AAGGGCGTAAACGAGGGGATCCAGACCGCTTTCTGGAGACAAATGTACTAGATAATTTTT 540
consensus_10317#1      ------------------------------------------------------------
consensus_10317#2      ------------------------------------------------------------
                                                                                   

consensus_10317#0      GATCTTCCCCAAATCCAGATTGCTCTTCTCGTCCCCAGTATACGCGATTATACACAGCTG 600
consensus_10317#1      ------------------------------------------------------------
consensus_10317#2      ------------------------------------------------------------
                                                                                   

consensus_10317#0      AAGTACTTGAATCTGAGGCATTGGGTGATCTAGGAGACGTGTCAGGACCAGGAGAATTGA 660
consensus_10317#1      ------------------------------------------------------------
consensus_10317#2      ------------------------------------------------------------
                                                                                   

consensus_10317#0      ATTTGCGCATATTTCTGGGCGGTAAATGTAATGTGTGGTCGATTGGAGTAGTACGAGTAC 720
consensus_10317#1      ------------------------------------------------------------
consensus_10317#2      ------------------------------------------------------------
                                                                                   

consensus_10317#0      CAGTTTCTGATTTACTGACGGGGGGATCTGGTTTTCGTTTTCCCTTGAACTGTTTACCTG 780
consensus_10317#1      --------ATTGTGATGGACGGGGGATCTGGTTTTCGTTTTCCCTTGAACTGTTTACCTG 52
consensus_10317#2      -----------GCGGTGGTCACCTCTACGCATTTTGCTGCCCAATGGAGCTGA--ACTTG 47
                                      **          *   ****  *   *  * ** ***   ** **

consensus_10317#0      ATGGGAGTTGGTCCGGATAGGTACTGACATCGTTATTAGGACTTAAACTCGGACGATTTT 840
consensus_10317#1      ATGGGAGTTGGTCCGGATAAGTACTGACATCGTGATTAAGACTTAAACTCGGACGATGGT 112
consensus_10317#2      CAGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGAATATGGTCGTGGGGAAAAAT 107
                         *** * **   * *  * *       *   * ** *  *  *   *  **   *   *

consensus_10317#0      GTCTCGGTCTCTGACTTCTGGTGTTCTTATACTCGATCTCCAGAGACGGATTCCTACATC 900
consensus_10317#1      GTCTCGGTCTCTGACTTCTGGTGTTCTTATACTCGATCTCCAGAGACAGATTCCTACATC 172
consensus_10317#2      CTAACGGC-----ACTTC-GAACTGTTCGTCATCGAAGTCCGCATACGACTGCATAT--- 158
                        *  ***      ***** *   *  *  *  ****  ***  * **   * * **    

consensus_10317#0      GACATTGAGGACAGTAAAAAGTTTTTATTTGCTCTGCTTGCTTAGGAGTGACATTAATA- 959
consensus_10317#1      GACATTGAGGACAGTAAAAAGTTTTTATTTGCTCTGCTTGCTTAGGAGTGACATTAATA- 231
consensus_10317#2      GGGATGGTGGTGTATCCATGGGTGTAGACTGTATCGGTGGCT-GCTTGCGGCGTCGAGAA 217
                       *  ** * **    *  *  * * *    **    * * ***     * * * *  * * 

consensus_10317#0      CAATCTCCGTGATACCATTCTTCGCATTGGTCACATGCTCTACATACTTATTACCATTCC 1019
consensus_10317#1      CAATCTCCGTGATACCATTCTTCGCATTGGTCACATGCT--------------------- 270
consensus_10317#2      CCAACGCCTTGAGAAGAAT--TAGAA--GGATTCCTGCT--------------------- 252
                       * * * ** *** *  * *  * * *  **   * ****                     

consensus_10317#0      TATAAACAACTCACATCATGAATCGTTCAGCGTCTGAAGAACGACAGACACAATAGACTT 1079
consensus_10317#1      --------------ATCATGAATCGTTCAGCGTCTGAAGAACGACAGACACAATAGACTT 316
consensus_10317#2      ---------------ACGGGAAGCGTTCA----TTCCAGCAC----------ATTGTCTT 283
                                       *  *** ******     *  ** **          ** * ***

consensus_10317#0      CACTCATCTTTTTATCAAACTCCTCATTCACAGTTTTTTTTTACCATTATTC-TTACGCC 1138
consensus_10317#1      CACTCATCTTTTTATCAAACTCCTCATTCACAGTTTTTTT--ACCATTATTC-TTACGCC 373
consensus_10317#2      AACTTACATTTCTGACGCATGGCTGGAATGCGGTGGTC----ACCTCTACGCATTTTGCT 339
                        *** *  *** *  *  *   **      * **  *     ***  **  * **  ** 

consensus_10317#0      GCTTTTGCATACTTGGTGGTTAGTTTGGCGA-ATAGACAAGGTCAGCANACAACTTTGAA 1197
consensus_10317#1      GCTTTTGCATACTTGGTGGTTAGTTTGGCGA-ATAGACAAGGTCAGCAAACAACTTTGAA 432
consensus_10317#2      GCCCAATGGAGCTGAACTTGCAGGGTGATGAGACAGGAACGACTGTGTAATATTATCAGA 399
                       **         **        **  **  ** * **  * *        * *   *   *

consensus_10317#0      GTTTACCACTTATCAAGTTTCATACTACAACACGGCATATGCAAGAAGGAATTTATAAGA 1257
consensus_10317#1      GTTTACCACTTATCAAGTTTCATACTACAACACGGCATATGCAAGAAGGAATTTATAAGA 492
consensus_10317#2      ATATGGTCGTGGGGAAAAATCTAACGGCACTTCGAACTGTTCGTCATCGAAGTCCGCATA 459
                        * *     *    **   **  **  **   **   * * *   *  *** *    * *

consensus_10317#0      CGCCACTAAGTGAAAAAACTACTTCAATTCCTCCTATTAGCGGAATTTTT 1307
consensus_10317#1      CGCCACTAAGTGAAAAAACT------------------------------ 512
consensus_10317#2      CGACTGCATATGGGA----------------------------------- 474
                       ** *   *  **  *