cluster # 10327

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Schistosoma mansoni
cluster # 10327 cluster # 10327 Sequences # 15 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10327#0 length = 1793 sequences # 14

consensus_10327#1 length = 430 sequences # 1

consensusID : consensus_10327#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1793
fasta sequence

                              [GTCACATGGATACGATAACTGAAGAGGCTGAACAAGAAAATGAAGACATCCAGCTGGATGACGATGAGTATTCTATGGATGAAGATTCTGATTTGGATGACGAAGATGAAGAACCAGGTGAAACTCATTCATCGCAACGCCGTCAACCTACTGACTTGGTAGAATCGGATG-GTAGTCGTCGTCGTGCTCGCGTCGATAGCCAACAATCTCAAGAGGATATTGATCTCGCACTGGAGAAAACAGAAGGAAAAGAAGCAGAGGAAGAGGAGAATGATCAGAACTATGAGTTGAAGCCACGATTTATTGATTGTCCTGAGGATATTGCATTCTGTGAAGCTTTAGATAAAATGATTGCCGAAGCATTGTTGTCATCTACATCAGGGAGTAATAGTAGTAGTGTCAGTGGTACAGTTACTAGTGTAACCAGCACTATGAATGTTAGTACTGATACAAATCCTGCGTCATCTCGGACTCTCAGTGTAAATGTTCTTCCTGCTCCAGAAATACTACAACTGGCAGCAGCAAAAAGTCGCTTAACAATGAAAGAAGGCGGCAGTTCATCGACAAATAATGTTAGCCAGCAAGCGACTAATCATCATAACTGTACCATTCATTCTGTGCCGAAATCTAATGAAGATAACTTAAAAATTAATAATTCGGATACACTGTCAGCTGTAAATGGTGAAGATAATCAGAATACTGTTCCCTTTACACTAGTTTCGCGTCGTGGAAATAAACCTCATCTAATTCCATTGGCAGTCCCTAACTCAGTTCAATTTGCAGCGCGTTATATTCAAGCTGCAGCTGCCGAG-AGAGAAGAAAGGGCTCGCATGAAACAACTGGTGCTTGAAATGCATGAAGCTCAGAAAGAAGAAGAAATGGAATGGGGTCATTACGGCGGTCCAGATGCCGTTTTGGCTCATCAATTCCCCATCAATGTGAATCGTGATCGCTGGGTAAAGTATAATCATCCAAAAGGTGCACCAGATGCTGATGTAGTTTTTGGAACACACAGTCAAAAACGATGTGCCAATTAATGAGCGTATCCTGTTAGAAAGACTTATTAATCATGGATCATCTGTTTCAAAAAATGGGACAATTTGAAATGGGAGAAATTATGGATTGTTCGATATTCAACGAATCATCCTTGTGTGTGTTGCACAGCATTCTATGGGCATAGCATGTGTGCAAGTATGTTGAGATGCAGTTTTGATCAGTTGAACAGACAAGATGTTTTAAAATGTAATCAATAAAAGAAATATATATATTTAAG-TTTTTTTTCTCTTTCCTCGATTTCTTCTTCATTTTCCAATTGTTTTATAAAAA-GAAAGTTTAAAAAATACTTCTTATTGATAAGTTTGATAGAAATACAAATCACATAATAAAACAAGACTGGATTTTAGAAGTATGAACTTTTCGGATTTCTACTTGTTTAGTGTATGTGCTCATGTTCTCCTTAAGTTAATTATTGTACTGTTTGATTCAGTTTGCTTTTTACTCTCTTCTTATTTAAGAAATAACCAAATTATTATCATCCTTTGAAAAGTCTAGATAGCGATTGCTATGTTGTTGTTTATCTTTCACTAACTATTATGCTGCGATTTTCACATTCAGCAAGAACTGCTACATTCTCATTCTTTGTCCATATCGCAACGTTTTGTCATTCAAAGATACATTTGTCTTATTTCTCGTATAAGCTGTGTTCTTTTCAAACTTATAATGGTTCATTACGAACAATTCTCTTGATAATTTTCGAAGAGCTTAGGCATGTCGTGGTGTTGAAAAAGAAAATA]

[-] EMBL CD190214             [GTCACATGGATACGATAACTGAAGAGGCTGAACAAGAAAATGAAGACATCCAGCTGGATGACGATGAGTATTCTATGGATGAAGATTCTGATTTGGATGACGAAGATGAAGAACCAGGTGAAACTCATTCATCGCAACGCCGTCAACCTACTGACTTGGTAGAATCGGATG GTAGTCGTCGTCGTGCTCGCGTCGATAGCCAACAATCTCAAGAGGATATTGATCTCGCACTGGAGAAAACAGAAGGAAAAGAAGCAGgac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD189888             [           ACGATAACTGAAGAGGCTGAACAAGAAAATGAAGACATCCAGCTGGATGACGATGAGTATTCTATGGATGAAGATTCTGATTTGGATGACGAAGATGAAGAACCAGGTGAAACTCATTCATCGCAACGCCGTCAACCTACTGACTTGGTAGAATCGGATG GTAGTCGTCGTCGTGCTCGCGTCGATAGCCAACAATCTCAAGAGGATATTGATCTCGCACTGGAGAAAACAGAAGGAAAAGAAGCAGAGGAAGAGGAGAATGATCAGAACTATGAGTTGAAGCCACGATTTATTGATTGTCCTGAGGATATTGCATTCTGTGAAGCTTTAGATAAAATGATTGCCG ACCATTGTTGTCATCTACATCAGGGAGTAATAGTAGTAGTGTCAGTGGTACAGTTACTAGTGTAACCAGCACTATGAATGTTAGTACTGATACAAATCCTGCGTCATCTCGGACTCTCAGTGTAAATGTTCTTCCTGCTCCAGAAATACTACAACTGGCAGCAGCAAAAACTCGCTTAACAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD083252             [                                                                                                                                                             gattcggTCCGAGGCGTAGTCGTCGTCGTGCTCGCGTCGATAGCCTACAATCTCAAGAGGATATTGATCTCGCACTGGAGAAAACAGAAGGAAAAGAAGCAGAGGAAGAGGAGAATGATCAGAACTATGAGTTGAAGCCACGATTTATTGATTGTCCTGAGGATATTGCATTCTGTGAAGCTTTAGATAAAATGATTGCCGAAGCATTGTTGTCATCTACATCAGGGAGTAATAGTAGTAGTGTCAGTGGTACAGTTACTAGTGTAACCAGCACTATGAATGTTAGTACTGATACAAATCCTGCGTCATCTCGGACTCTCAGTGTAAATGTTCTTCCTGCTCCAGAAATACTACAACTGGCAGCAGCAAAAAGTCGCTTAACAATGAAAGAAGGCGGCAGTTCATCGACAAATAATGTTAGCCAGCAAGCGACTAATCATCATAACTGTACCATTCATTCTGTGTCGAAATCTAATGAAGATAACTTAAAAATTAATAATTCGGATACACTGTCAGCTGTAAATGGTGAAGATAATCAGAATACTGTTCCCTTTACACTAGTTTCGCGTCGTGGAAATAAACCTCATCTAATTCCATTGGCAGTCCCTAACTCAGTTCAATTTGCAGCGCGTTATATTCAAGCTGCAGCTGCCGAGAAGAG AGAAAGGGCTCGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD064959             [                                                                                                                                                                                                                              GATCTCGCACTGGAGAAAACAGAAGGAAAAGAAGCAGAGGAAGAGGAGAATGATCAGAACTATGAGTTGAAGCCACGATTTATTGATTGTCCTGAGGATATTGCATTCTGTGAAGCTTTAGATAAAATGATTGCCGAAGCATTGTTGTCATCTACATCAGGGAGTAATAGTAGTAGTGTCAGTGGTACAGTTACTAGTGTAACCAGCACTATGAATGTTAGTACTGATACAAATCCTGCGTCATCTCGGACTCTCAGTGTAAATGTTCTTCCTGTTCCAGAAATACTACAACTGGCAGCAGCAAAAAGTCGCTTAACAATGAAAGAAGGCGGCAGTTCATCGACAAATAATGTTAGCCAGCAAGCGACTAATCATCATAACTGTACCATTCATTCTGTGCCGAAATCTAATGAAGATAACTTAAAAATTAATAATTCGGATACACTGTCAGCTGTAAGTGGTGAAGATAATCAGAATACTGTTCCCTTTACACTAGTTTCGCGTCGTGGAAATAAACCTCATCTAATTCCATTGGCAGTCCCTAACTCAGTTCAATTTGCAGCGCGTTATATTCAAGCTGCAGCTGCCGAG AGAGAAGAAAGGGCTCGCATGAAACAACTGGTGCTTGAAATGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD064970             [                                                                                                                                                                                                                              GATCTCGCACTGGAGAAAACAGAAGGAAAAGAAGCAGAGGAAGAGGAGAATGATCAGAACTATGAGTTGAAGCCACGATTTATTGATTGTCCTGAGGATATTGCATTCTGTGAAGCTTTAGATAAAATGATTGCCGAAGCATTGCTGTCATCTACATCAGGGAGTAATAGTAGTAGTGTCAGTGGTACAGTTACTAGTGTAACCAGCACTATGAATGTTAGTACTGATACAAATCCTGCGTCATCTCGGACTCTCAGTGTAAATGTTCTTCCTGCTCCAGAAATACTACAACCGGCAGCAGCAAAAAGTCGCTTAACAATGAAAGAAGGCGGCAGTTCATCGACAAATAATGTTAGCCAGCAAGCGACTAATCATCATAACTGTACCATTCATTCTGTGCCGAAATCTAATGAAGATAACTTAAAAATTAATAATTCGGATACACTGTCAGCTGTAAATGGTGAAGATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD167044             [                                                                                                                                                                                                                                                                                                          GATTTATTGATTGTGCTGAGGATATTGCATTCTGTGAAGCCTTACATAAAATGATTGCCGAAGCATTGTTGTCATGTACATCAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD179742             [                                                                                                                                                                                                                                                                                                                                       TTCTGTGAAGCTTTAGATAAAATGATTGCCGAAGCATTGTTGTCATCTACATCAGGGAGTAATAGTAGTAGTGTCAGTGGTACAGTTACTAGTGTAACCAGCACTATGAATGTTAGTACTGATACAAATCCTGCGTCATCTCGGACTCTCAGTGTAAATGTTCTTCCTGCTCCAGAAATACTACAACTGGCAGCAGCAAAAAGTCGCTTAACAATGAAAGAAGGCGGCAGTTCATCGACAAATAATGTTAGCCAGCAAGCGACTAATCATCATAACTGTACCATTCATTCTGTGTCGAAATCTAATGAAGATAACTTAAAAATTAATAATTCGGATACACTGTCAGCTGTAAATGGTGAAGATAATCATAATACTGTTCCCTTTACACTAGTTTCGCGTCGTGGAAATAAACCTCATCTAATTCCATTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD185380             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAAAGTCGCTTAACAATGAAAGAAGGCGGCAGTTCATCGACAAATAATGTTAGCCAGCAAGCGACTAATCATCATAACTGTACCATTCATTCTGTGCCGAAATCTAATGAAGATAACTTAAAAATTAATAATTCGGATACACTGTCAGCTGTAAATGGTGAAGATAATCAGAATACTGTTCCCTTTACACTAGTTTCGCGTCGTGGAAATAAACCTCATCTAATTCCATTGGCAGTCCCTAACTCAGTTCAATTTGCAGCGCGTTATATTCAAGCTGCAGCTGCCGAG AGAGAAGAAAGGGCTCGCATGAAACAACTGGTGCTTGAAATGCATGAAGCTCAGAAAGAAGAAGAAATGGAATGGGGTCATTACGGCGGTCCAGATGCCGTTTTGGCTCATCAATTCCCCATCAATGTGAATCGTGATCGCTGGGTAAAGTATAATCATCCAAAAGGTGCACCAGATGCTGATGTAGTTTTTGGAACACACAGTCAAAAACGATGTGCCAATTAATGAGCGTATCCTGTTAGAAAGACTTATTAATCATGGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD082829             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     tAATGGTGAAGATAATCAGAATACTGTTCCCTTTAC CTAGTTTCGCGTCGTGGAAATAAACCTCATCTAATTCCATTGGCAGTCCCTAACTCAGTTCAATTTGCAGCGCGTTATATTCAAGCTGCAGCTGCCGAG AGAGAAGAAAGGGCTCGCATGAAACAACTGGTGCTTGAAATGCATGAAGCTCAGAAAGAAGAAGAAATGGAATGGGGTCATTACGGCGGTCCAGATGCCGTTTTGGCTCATCAATTCCCCATCAATGTGAATCGTGATCGCTGGGTAAAGTATAATCATCCAAAAGGTGCACCAGATGCTGATGTAGTTTTTGGAACACACAGTCAAAAACGATGTGCCAATTAATGAGCGTATCCTGTTAGAAAGACT  TTAATCATGGATCATCTGTTTCAAAAAATGGGACAATTTGAAATGGGAGAAATTATGGATTGTTCGATATTCAACGAATCATCCTTGTGTGTGTTGCACAGCATTCTATGGGCATAGCATGTGTGCAAGTATGTTGAGATGCAGTTTTGATCAGTTGAACAGACAAGATGTTTTAAAATGGTATCAATANAAGAAATATATATATTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD192310             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGTGCACCAGATGCTGATGTAGTTTTTGGAACACACAGTCAAAAACGATGTGCCAATTAATGAGCGTATCCTGTTAGAAAGACTTATTAATCATGGATCATCTGTTTCAAAAAATGGGACAATTTGAAATGGGAGAAATTATGGATTGTTCGATATTCAACGAATCATCCTTGTGTGTGTTGCACAACATTCTATGGGCATAGCATGTGTGCAAGTATGTTGAGATGCAGTTTTGATCAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD140362             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATGCTGATGTAGTTTTTGGAACACACAGTCAAAAACGATGTGCCAATTAATGAGCGTATCCTGTTAGAAAGACTTATTAATCATGGATCATCTGTTTCAAAAAATGGGACAATTTGAAATGGGAGAAATTATGGATTGTTCGATATTCAACGAATCATCCTTGTGTGTGTTGCACAGCATTCTATGGGCATAGCATGTGTGCAAGTATGTTGAGATGCAGTTTTGATCAGTTGAACAGACAAGATGTTTTAAAATGTAATCAATAAAAGAAATATATATATTTAAGTTTTTTTTTCTCTTTCCTCGATTTCTTCTTCATTTTCCAATTGTTTTATAAAAAGGAAAGTTTAAAAAATACTTCTTATTGATAAGTTTGATAGAAATACCAATCACCTTATAAAACA                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD185604             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGTCAAAAACGATGTGCCAATTAATGAGCGTATCCTGTTAGAAAGACTTATTAATCATGGATCATCTGTTTCAAAAAATGGGACAATTTGAAATGGGAGAAATTATGGATTGTTCGATATTCAACGAATCATCCTTGTGTGTGTTGCACAGCATTCTATGGGCATAGCATGTGTGCAAGTATGTTGAGATGCAGTTTTGATCAGTTGAACAGACAAGATGTTTTAAAATGTAATCAATAAAAGAAATATATATATTTAAG TTTTTTTTCTCTTTCCTCGATTTCTTCTTCATTTTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD076417             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTAATCATGGATCATCTGTTTCAAAAAATGGGACAATTTGAAATGGGAGAAATTATGGATTGTTCGATATTCAACGAATCATCCTTGTGTGTGTTGCACAGCATTCTATGGGCATAGCATGTGTGCAAGTATGTTGAGATGCAGTTTTGATCAGTTGAACAGACAAGATGTTTTAAAATGTAATCAATAAAAGAAATATATATATTTAAG TTTTTTTTCTCTTTCCTCGATTTCTTCTTCATTTTCCAATTGTTTTATAAAAA GAAAGTTTAAAAAATACTTCTTATTGATAAGTTTGATAGAAATACAAATCACATAATAAAACAAGACTGGATTTTAGAAGTATGAACTTTTCGGATTTCTACTTGTTTAGTGTATGTGCTCATGTTCTCCTTAAGTTAATTATTGTACTGTTTGATTCAGTTTGCTTTTTACTCTCTTCTTATTTAAGAAATAACCAAATTATTATCATCCTTTGAAAAGTCTAGATAGCGATTGCTATGTTGTTGTTTATCTTTCACTAACTATTATGCTGCGATTTTCACATTCAGCAAGAACTGCTACATTCTCATTCTTTGTCCATATCGCAACGTTTTGTCATTCAAAGATACATTTGTCTT                                                                                                              ]
[-] EMBL CD076822             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCAGTTGAACAGACAAGATGTTTTANAATGTAATCAATAAAAGAAATATATATATTTAAG TTTTTTTTCTCTTTCCTCGATTTCTTCTTCATTTTCCAATTGTTTTATAAAAA GAAAGTTTAAAAAATACTTCTTATTGATAAGTTTGATAGAAATACAAATCACATAATAAAACAAGACTGGATTTTAGAAGTATGAACTTTTCGGATTTCTACTTGTTTAGTGTATGTGCTCATGTTCTCCTTAAGTTAATTATTGTACTGTTTGATTCAGTTTGCTTTTTACTCTCTTCTTATTTAAGAAATAACCAAATTATTATCATCCTTTGAAAAGTCTAGATAGCGATTGCTATGTTGTTGTTTATCTTTCACTAACTATTATGCTGCGATTTTCACATTCAGCAAGAACTGCTACATTCTCATTCTTTGTCCATATCGCAACGTTTTGTCATTCAAAGATACATTTGTCTTATTTCTCGTATAAGCTGTGTTCTTTTCAAACTTATAATGGTTCATTACGAACAATTCTCTTGATAATTTTCGAAGAGCTTAGGCATGTCGTGGTGTTGAAAAAGAAAATA]




>consensus_10327#0
GTCACATGGATACGATAACTGAAGAGGCTGAACAAGAAAATGAAGACATCCAGCTGGATG
ACGATGAGTATTCTATGGATGAAGATTCTGATTTGGATGACGAAGATGAAGAACCAGGTG
AAACTCATTCATCGCAACGCCGTCAACCTACTGACTTGGTAGAATCGGATGGTAGTCGTC
GTCGTGCTCGCGTCGATAGCCAACAATCTCAAGAGGATATTGATCTCGCACTGGAGAAAA
CAGAAGGAAAAGAAGCAGAGGAAGAGGAGAATGATCAGAACTATGAGTTGAAGCCACGAT
TTATTGATTGTCCTGAGGATATTGCATTCTGTGAAGCTTTAGATAAAATGATTGCCGAAG
CATTGTTGTCATCTACATCAGGGAGTAATAGTAGTAGTGTCAGTGGTACAGTTACTAGTG
TAACCAGCACTATGAATGTTAGTACTGATACAAATCCTGCGTCATCTCGGACTCTCAGTG
TAAATGTTCTTCCTGCTCCAGAAATACTACAACTGGCAGCAGCAAAAAGTCGCTTAACAA
TGAAAGAAGGCGGCAGTTCATCGACAAATAATGTTAGCCAGCAAGCGACTAATCATCATA
ACTGTACCATTCATTCTGTGCCGAAATCTAATGAAGATAACTTAAAAATTAATAATTCGG
ATACACTGTCAGCTGTAAATGGTGAAGATAATCAGAATACTGTTCCCTTTACACTAGTTT
CGCGTCGTGGAAATAAACCTCATCTAATTCCATTGGCAGTCCCTAACTCAGTTCAATTTG
CAGCGCGTTATATTCAAGCTGCAGCTGCCGAGAGAGAAGAAAGGGCTCGCATGAAACAAC
TGGTGCTTGAAATGCATGAAGCTCAGAAAGAAGAAGAAATGGAATGGGGTCATTACGGCG
GTCCAGATGCCGTTTTGGCTCATCAATTCCCCATCAATGTGAATCGTGATCGCTGGGTAA
AGTATAATCATCCAAAAGGTGCACCAGATGCTGATGTAGTTTTTGGAACACACAGTCAAA
AACGATGTGCCAATTAATGAGCGTATCCTGTTAGAAAGACTTATTAATCATGGATCATCT
GTTTCAAAAAATGGGACAATTTGAAATGGGAGAAATTATGGATTGTTCGATATTCAACGA
ATCATCCTTGTGTGTGTTGCACAGCATTCTATGGGCATAGCATGTGTGCAAGTATGTTGA
GATGCAGTTTTGATCAGTTGAACAGACAAGATGTTTTAAAATGTAATCAATAAAAGAAAT
ATATATATTTAAGTTTTTTTTCTCTTTCCTCGATTTCTTCTTCATTTTCCAATTGTTTTA
TAAAAAGAAAGTTTAAAAAATACTTCTTATTGATAAGTTTGATAGAAATACAAATCACAT
AATAAAACAAGACTGGATTTTAGAAGTATGAACTTTTCGGATTTCTACTTGTTTAGTGTA
TGTGCTCATGTTCTCCTTAAGTTAATTATTGTACTGTTTGATTCAGTTTGCTTTTTACTC
TCTTCTTATTTAAGAAATAACCAAATTATTATCATCCTTTGAAAAGTCTAGATAGCGATT
GCTATGTTGTTGTTTATCTTTCACTAACTATTATGCTGCGATTTTCACATTCAGCAAGAA
CTGCTACATTCTCATTCTTTGTCCATATCGCAACGTTTTGTCATTCAAAGATACATTTGT
CTTATTTCTCGTATAAGCTGTGTTCTTTTCAAACTTATAATGGTTCATTACGAACAATTC
TCTTGATAATTTTCGAAGAGCTTAGGCATGTCGTGGTGTTGAAAAAGAAAATA

consensusID : consensus_10327#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 430
fasta sequence

                              [TACGATAACTGAAGAGGCTGAACAAGAAAATGAAGACATCCAGCTGGATGACGATGAGTATTCTATGGATGAAGATTCTGATTTGGATGACGAAGATGAAGAACCAGGTGAAACTCATTCATCGCAACGCCGTCAACCTACTGACTTGGTAGAATCGGATGGTAGTCGTCGTCGTTCTCGCGTCGATAGCCAACAATCTCAAGAGGATATTGATCTCGCACTGGTAAATGGCCCGGTTTATGCATAATATATTGTAATTTAATGTTTAAGACCGCTATGCAAGTAACAGTCTTCGTACATTCGTGCGCTATGCTGATCATTTCACTACTCGAGCTTCAATGTCGTGAACGAGACCTCTTGTATTCTCTTCTTTTCCTTGCTCCACTTACTAAAGTCAAAATACCAGGCTTTGTAGACTAGGCTTTTTCAT]

[+] EMBL CD190142             [TACGATAACTGAAGAGGCTGAACAAGAAAATGAAGACATCCAGCTGGATGACGATGAGTATTCTATGGATGAAGATTCTGATTTGGATGACGAAGATGAAGAACCAGGTGAAACTCATTCATCGCAACGCCGTCAACCTACTGACTTGGTAGAATCGGATGGTAGTCGTCGTCGTTCTCGCGTCGATAGCCAACAATCTCAAGAGGATATTGATCTCGCACTGGTAAATGGCCCGGTTTATGCATAATATATTGTAATTTAATGTTTAAGACCGCTATGCAAGTAACAGTCTTCGTACATTCGTGCGCTATGCTGATCATTTCACTACTCGAGCTTCAATGTCGTGAACGAGACCTCTTGTATTCTCTTCTTTTCCTTGCTCCACTTACTAAAGTCAAAATACCAGGCTTTGTAGACTAGGCTTTTTCAT]




>consensus_10327#1
TACGATAACTGAAGAGGCTGAACAAGAAAATGAAGACATCCAGCTGGATGACGATGAGTA
TTCTATGGATGAAGATTCTGATTTGGATGACGAAGATGAAGAACCAGGTGAAACTCATTC
ATCGCAACGCCGTCAACCTACTGACTTGGTAGAATCGGATGGTAGTCGTCGTCGTTCTCG
CGTCGATAGCCAACAATCTCAAGAGGATATTGATCTCGCACTGGTAAATGGCCCGGTTTA
TGCATAATATATTGTAATTTAATGTTTAAGACCGCTATGCAAGTAACAGTCTTCGTACAT
TCGTGCGCTATGCTGATCATTTCACTACTCGAGCTTCAATGTCGTGAACGAGACCTCTTG
TATTCTCTTCTTTTCCTTGCTCCACTTACTAAAGTCAAAATACCAGGCTTTGTAGACTAG
GCTTTTTCAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10327#0      GTCACATGGATACGATAACTGAAGAGGCTGAACAAGAAAATGAAGACATCCAGCTGGATG 60
consensus_10327#1      ----------TACGATAACTGAAGAGGCTGAACAAGAAAATGAAGACATCCAGCTGGATG 50
                                 **************************************************

consensus_10327#0      ACGATGAGTATTCTATGGATGAAGATTCTGATTTGGATGACGAAGATGAAGAACCAGGTG 120
consensus_10327#1      ACGATGAGTATTCTATGGATGAAGATTCTGATTTGGATGACGAAGATGAAGAACCAGGTG 110
                       ************************************************************

consensus_10327#0      AAACTCATTCATCGCAACGCCGTCAACCTACTGACTTGGTAGAATCGGATGGTAGTCGTC 180
consensus_10327#1      AAACTCATTCATCGCAACGCCGTCAACCTACTGACTTGGTAGAATCGGATGGTAGTCGTC 170
                       ************************************************************

consensus_10327#0      GTCGTGCTCGCGTCGATAGCCAACAATCTCAAGAGGATATTGATCTCGCACTGGAGAAAA 240
consensus_10327#1      GTCGTTCTCGCGTCGATAGCCAACAATCTCAAGAGGATATTGATCTCGCACTGGT----- 225
                       ***** ************************************************      

consensus_10327#0      CAGAAGGAAAAGAAGCAGAGGAAGAGGAGAATGATCAGAACTATGAGTTGAAGCCACGAT 300
consensus_10327#1      -------AAATGGCCCGGTTTATGCATAATATATTGTAATTTAATGTTTAAGACCGCTAT 278
                              *** *   * *   * *   *  **  *   *  **    ** *  ** * **

consensus_10327#0      TTATTGATTGTCCTGAGGATATTGCATTCTGTGAAGCTTTAGATAAAATGATTGCCGAAG 360
consensus_10327#1      GCAAGTAACAGTCTTCGTACATT-CGTGC-GCTATGCT---GATCATTTCACTACTCGAG 333
                         *   *     **  * * *** * * * *  * ***   *** *  * * * *   **

consensus_10327#0      CATTGTTGTCATCTACATCAGGGAGTA-ATAGTAGTAGTGTCAGTGGTACAGTTACTAGT 419
consensus_10327#1      CTTCAATGTCGTGAACGAGACCTCTTGTATTCTCTTCTTTTCCTTGCTCCACTTACTAAA 393
                       * *   **** *  **   *     *  **  *  *  * **  ** * ** ******  

consensus_10327#0      GTAACCAGCACTATGAATGTTAGTACTGATACAAATCCTGCGTCATCTCGGACTCTCAGT 479
consensus_10327#1      GTCAA-AATACCAGGCTTTGTAG-ACTAGGCTTTTTCAT--------------------- 430
                       ** *  *  ** * *  *  *** ***        ** *                     

consensus_10327#0      GTAAATGTTCTTCCTGCTCCAGAAATACTACAACTGGCAGCAGCAAAAAGTCGCTTAACA 539
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      ATGAAAGAAGGCGGCAGTTCATCGACAAATAATGTTAGCCAGCAAGCGACTAATCATCAT 599
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      AACTGTACCATTCATTCTGTGCCGAAATCTAATGAAGATAACTTAAAAATTAATAATTCG 659
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      GATACACTGTCAGCTGTAAATGGTGAAGATAATCAGAATACTGTTCCCTTTACACTAGTT 719
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      TCGCGTCGTGGAAATAAACCTCATCTAATTCCATTGGCAGTCCCTAACTCAGTTCAATTT 779
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      GCAGCGCGTTATATTCAAGCTGCAGCTGCCGAGAGAGAAGAAAGGGCTCGCATGAAACAA 839
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      CTGGTGCTTGAAATGCATGAAGCTCAGAAAGAAGAAGAAATGGAATGGGGTCATTACGGC 899
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      GGTCCAGATGCCGTTTTGGCTCATCAATTCCCCATCAATGTGAATCGTGATCGCTGGGTA 959
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      AAGTATAATCATCCAAAAGGTGCACCAGATGCTGATGTAGTTTTTGGAACACACAGTCAA 1019
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      AAACGATGTGCCAATTAATGAGCGTATCCTGTTAGAAAGACTTATTAATCATGGATCATC 1079
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      TGTTTCAAAAAATGGGACAATTTGAAATGGGAGAAATTATGGATTGTTCGATATTCAACG 1139
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      AATCATCCTTGTGTGTGTTGCACAGCATTCTATGGGCATAGCATGTGTGCAAGTATGTTG 1199
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      AGATGCAGTTTTGATCAGTTGAACAGACAAGATGTTTTAAAATGTAATCAATAAAAGAAA 1259
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      TATATATATTTAAGTTTTTTTTCTCTTTCCTCGATTTCTTCTTCATTTTCCAATTGTTTT 1319
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      ATAAAAAGAAAGTTTAAAAAATACTTCTTATTGATAAGTTTGATAGAAATACAAATCACA 1379
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      TAATAAAACAAGACTGGATTTTAGAAGTATGAACTTTTCGGATTTCTACTTGTTTAGTGT 1439
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      ATGTGCTCATGTTCTCCTTAAGTTAATTATTGTACTGTTTGATTCAGTTTGCTTTTTACT 1499
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      CTCTTCTTATTTAAGAAATAACCAAATTATTATCATCCTTTGAAAAGTCTAGATAGCGAT 1559
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      TGCTATGTTGTTGTTTATCTTTCACTAACTATTATGCTGCGATTTTCACATTCAGCAAGA 1619
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      ACTGCTACATTCTCATTCTTTGTCCATATCGCAACGTTTTGTCATTCAAAGATACATTTG 1679
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      TCTTATTTCTCGTATAAGCTGTGTTCTTTTCAAACTTATAATGGTTCATTACGAACAATT 1739
consensus_10327#1      ------------------------------------------------------------
                                                                                   

consensus_10327#0      CTCTTGATAATTTTCGAAGAGCTTAGGCATGTCGTGGTGTTGAAAAAGAAAATA 1793
consensus_10327#1      ------------------------------------------------------