These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10337#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1965 fasta sequence [TTATAGAATCTACGAGAGACAAACAGTAGTAAAACAACTCAGAAGGATGAGAGAAATACAGATTTTGCACAAAATAAAACTTTGGACATTGGGAGAATTATTATCATCAACATCAAAAATATGATATCGAATGATTAGCCAGGTGTTAGTTTGACCTTATTTTGAATAGGTAATGGATGCGCTTCAGAATTGAACACCCATCTATCAAGCGGTAATAAAGTATCTTCCGAAAGTATTAAATAAAGGTATTTTAGTGTTTCTGCTAAGAAATACGACTGTTGAACATCATCTAAAGTAGAGTTAATAGAGTAAACGTCATGTAAACCAGAATAGCCAGCATTTGTACGAGCATATTTTTCAATAGCCTGAACTACATCCCATGCCCAAACACGATACTTTGGATCTTTAGTAAGTCTCCATAAATAGAAATATGATTCCACCGTTTCTGGTCGAAGAAGATACATTTTATGAGATTGAGTAATCGCGATTGCAGAAGATTGATCAGTAAATGAAAATATTTCTGGACCAAGACCTGTTGATGCACTGTCGTAACTTCTTCTACAAGTATCAGTAATTTCAACACCACGTTGAAACCATGGATCATTTTTATCTGATGCACCGAGAGAGAGCATGCCGCCAACAAAACAAGCCAAATGATCCATTGAATTTGAAATAGCGCCATATTTGTAGTTGCCAACATAAAGTAAATTATGTTGAGGACTTTTATGAAATAAGCCAACTTTTAAGAATGATTCTAAACTAGAATTGTATAATTCAAGAGCTTTCACATCTTTATGATCAGTACGAATCCATTCTTTTAATAAATATTCATAAAATGAATCACCTAATGCAGAGAGACCAGCTTCATTACCACACCATGATTTTGTATTCGGATTCATAAAATTAAGAAATAATCCATTAGGTCTGTCCACTTCCTCCAAAATCTTACGAATAGCATCAACCTTTTCTGAGTAGACTGGATTACCAGTTAACTCAGAAAGATATTTAAATTCCATATGTAATGTACCAAACTCTGATAGAATTGAACATCGACCATTTGCCCAGACAAAATTCCGTTTATCTCCCGTTTTCAAATTGATTAAACTCATTGGAATTCCACTAGGTGTATCAAATGCAGGTAATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAATAAAATAGGTTTTCTACTGAATGTGTAGGCAGACAGCAAGCCACCAATATACCTAATATTGAATTCAAACACCGATACTTGAGTGTTTTTATTAAAATCCAGATTCGTTTCTATCCATTCTACAGCTGTATTGAATTCTTTGTTCAAATTCATTATGTACAAAGTGTCCAAACTATCGATTACGGAAGCCCCGAGTGGTTCATTTCCAAGCACAAAAGGTAAGTGACCAGTTTTTGAAA-CCGGTCTCAATTCATTACTT-CCCCATGCAT-AGGTAGCATAACCATTCCAAGC-AAACTTCATCATCTCTCGAACCTTATCTCGTATAGAAGCTACTGT-CTCA-TTTACAGGAAAGCCACCTTGAATTTCTTCCTTGGAAATAAGTGTTCCATTATTGAAAGCTGCAATTGACGGAAGCTTTTCAGAAATAGGAAGTGTTTGAGTAAGAACCTTTGTTGCATTTTCTAAAGCATCGGTTTCTATAGGTATTTGTGCAGGTGGTTGGATTTGACGAGAATCCTGGTCAGACTCTGGAATGTTAGGTGGTGGTCCGATTATCTGTGGCTTTGGGACCACACTAGGTAATTTAAGAATCTTTTCTTCAAACAAGTAGTTGTTAAGTAAACTTGTTGTGACAAAGATTATTATGACAACTAGAATTAAGTGAAAAATACGTCGACATCGGAAACTTCGGACTCGTAATTTCATATTTTTCACTATAGATAGGGAGTCTGCATACACACCTTACACCGGTCTTAGATTCCGCGCTCAGACCAGTTTCTTTACACACCCG] [+] EMBL CD152961 [TTATAGAATCTACGAGAGACAAACAGTAGTAAAACAACTCAGAAGGATGAGAGAAATACAGATTTTGCACAAAATAAAACTTTGGACATTGGGAGAATTATTATCATCAACATCAAAAATATGATATCGAATGATTAGCCAGGTGTTAGTTTGACCTTATTTTGAATAGGTAATGGATGCGCTTCAGAATTGAACACCCATCTATCAAGCGGTAATAAAGTATCTTCCGAAAGTATTAAATAAAGGTATTTTAGTGTTTCTGCTAAGAAATACGACTGTTGAACATCATCTAAAGTAGAGTTAATAGAGTAAACGTCATGTAAACCAGAATAGCCAGCATTTGTACGAGCATATTTTTCAATAGCCTGAACTACATCCCATGCCCAAACACGATACTTTGGATCTTTAGTAAGTCTCCATAAATAGAAATATGATTCCACCGTTTCTGGTCGAAGAAGATACATTTTATGAGATTGAGTAATCGCGATTGCAGAAGATTGATCAGTAAATGAAAATATTTCTGGACCAAGACCTGTTGATGCACTGTCGTAACTTCTTCTACAAGTATCAGTAATTTCAACACCACGTTGAAACCATGGATCATTNTTATCTGATGCACCGAGAGAGAGCATGCCGCCAACAAAACAAGCCAAATGATCCATT ] [+] EMBL CD162964 [ CATTTGTACGAGCATATTTTTCAATAGCCTGAACTACATCCCATGCCCAAACACGATACTTTGGATCTTTAGTAAGTCTCCATAAATAGAAATATGATTCCACCGTTTTTGGTCGAAGAAGATACATTTTATGAGATTGAGTAATCGCGATTGCAGAAGATTGATCAGTAAATGAAAATATTTCTGGACCAAGACCTGTTGATGCACTATCGTAACTTCTTCTACAAGTATCAGTAATTTCAACACCACGTTGAAACCATGGATCATTTTTAT ] [-] EMBL CD162690 [ ATTTGTACGAGCATATTTTTCAATAGCCTGAACTACATCCCATGCCCAAACACGATACTTTGGATCTTTAGTAAGTCTCCATAAATAGAAATATGATTCCACCGTTTCTGGTCGAAGAAGATACATTTTATGAGATTGAGTAATCGCGATTGCAGAAGATTGATCAGTAAATGAAAATATTTCTGGACCAAGACCTGTTGATGCACTATCGTAACTTCTTCTACAAGTATCAGTAATTTCAACACCACGTTGAAACCATGGATCATTTTTATC ] [-] EMBL CD153243 [ TACGAGCATA TTTTCAATAGCCTGANCTACATCNCATGCCCAAACACGATACTTTGGATCTTTAGTAAGTCTCCATAAATAGAAATATGATTCCACCGTTTCTGGTCGAAGAAGATACATTNTATGAGATTGAGTAATCGCGATTGCAGAAGATTGATCAGTAAATGAAAATATTTCTGGACCAAGACCTGTTGATGCACTGTCGTAACTTCTTCTACAAGTATCAGTAATTTCAACACCACGTTGAAACCATGGATCATTTTTATCTGATGCACCGAGAGAGAGCATGCCGCCAACAAAACAAGCCAAATGATCCATTGAATTTGAAATAGCGCCATATTTGTAGTTGCCAACATAAAGTAAATTATGTTGAGGACTTTTATGAAATAAGCCAACTTTTAAGAATGATTCTAAACTAGAATTGTATAATTCAAGAGCTTTCACATCTTTATGATCAGTACGAATCCATTCTTTTAATAAATATTCATAAAATGAATCACCTAATGCAGAGAGACCAGCTTCATTACCACACCATGATTTTGTATTCGGATTCATAAAATTAAGAAATAATCCATTAGGTCTGTCCACTTCCTCCAAAATCTTAC ] [-] EMBL CD152642 [ CCATGCCCAAACACGATACTTTGGATCTTTAGTAAGTCTCCATAAATAGAAATATGATTCCACCGTTTCTGGTCGAAGAAGATACATTTTATGAGATTGAGTAATCGCGATTGCAGAAGATTGATCAGTAAATGAAAATATTTCTGGACCAAGACCTGTTGATGCACTGTCGTAACTTCTTCTACAAGTATCAGTAATTTCAACACCACGTTGAAACCATGGATCATTTTTATCTGATGCACCGAGAGAGAGCATGCCGCCAACAAAACAAGCCAAATGATCCATTGAATTTGAAATAGCGCCATATTTGTAGTTGCCAACATAAAGTAAATTATGTTGAGGACTTTTATGAAATAAGCCAACTTTTAAGAATGATTCTAAACTAGAATTGTATAATTCAAGAGCTTTCACATCTTTATGATCAGTACGAATCCATTCTTTTAATAAATATTCATAAAATGAATC ] [+] EMBL CD196462 [ CTTTATGATCAGTACGAATCCATTCTTTTAATAAATATTCATAAAATGAGTCACCTAATGCAGAGAGACCAGCTTCATTACCACACCATGATTTTGTATTCGGATTCATAAAATTAAGAAATAATCCATTAGGTCTGTCCACTTCCTCCAAAATCTTACGAATAGCATCAACCTTTTCTGAGTAGACTGGATTACCAGTTAACTCAGAAAGATATTTAAATTCCATATGTAATGTACCAAACTCTGATAGAATTGAACATCGACCATTTGCCCAGACAAAATTCCGTTTATCTCCCGTTTTCAAATTGATTAAACTCATTGGAATTCCACTAGGTGTATCAAATGCAGGTAATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAATAAAATAGGTTTTCTACTGAATGTGTAGGCAGACAGCAAGCCACCAATATACCTTATATTGAATTCAAACACCGAT ] [-] EMBL CD147531 [ CACACCATGATTTTGTATTCGGATTCATAAAATTAAGAAATAATCCATTAGGTCTGTCCACTTCCTCCAAAATCTTACGAATAGCATCAACCTTTTCTGAGTAGACTGGATTACCAGTTAACTCAGAAAGATATTTAAATTCCATATGTAATGTACCAAACTCTGATAGAATTGAACATCGACCATTTGCCCAGACAAAATTCCGTTTATCTCCCGTTTTCAAATTGATTAAACTCATTGGAATTCCACTAGGTGTATCAAATGCAGGTAATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAATAAAATAGGTTTTCTACTGAATGTGTAGGCAGACAGCAAGCCACCAATATACCTA ] [+] EMBL CD123309 [ GAATAGCATCAACCTTTTCTGAGTAGACTGGATTACCAGTTAACTCAGAAAGATATTTAAATTCCATATGTAATGTACCAAACTCTGATAGAATTGAACATCGACCATTTGCCCAGACAAAATTCTGTTTATCTCCCGTTTTCAAATTGATTAAACTCATTGGAATTCCACTAGGTGTATCAAATGCAGGTAATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAATAAAATA ] [+] EMBL CD111546 [ TGCAGGGTATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAACAAAATAGGTTTTCTACTGAATGTGTAGGCAGACAGCAAGCCACCAATATACCCAATATTGAATTCAAACACCGATACTTGAGTGTTTTTATTAAAATCCAGATTCGTTTCTATCCATTCTACAGCTGTATTGAATTCTTTGTTCAAATTCATTATGTACAAAGTGTCCAAACTATCGATTACGGAAGCCCCGAGTGGTTCATTTCCAAGCACAAAAGGTAAGTGACCAGTTTTTGAAA CCGGTCTCAATTCATTA ] [+] EMBL CD117115 [ GCAGGTAATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAATAAAATAGGTTTTCTACTGAATGTGTAGGCAGACAGCAAGCCACCAATATACCTAATATTGAATTCAAACACCGATACTTGAGTGTTTTTATTAAAATCCAGATTCGTTTCTATCCATTCTACAGCTGTATTGAATTCTTTGTTCAAATTCATTATGTACAAAGTGTCCAAACTATCGATTACGGAAGCCCCGAGTGGTTCATTTCCAAGCACAAAAGGTAAGTGACCAGTTTTTGAAA CCGGTCTCAATTCATTACTT CCCCATGCAT AGGTAGCATAACCATTCCAAGC AAACTTCATCATCTCTCGAACCTTATCTCGTATAGAAGCTACTGT CTCA TTTACAGGAAAGCCACCTTGAATTTCTTCCTTGGAAATAAGTGTTCCATTATTGAAAGCTGCAATTGACGGAAGCTTTTCAGAAATAGGAAGTGTTTGAGTAAGAACCTTTGTTGCATTTTCTAAAGCATCGGTTTCTATAGGTATTTGTGCAGGTGGTTGGATTTGACGAGAATCCTGGTCAGACTCTGGAATGTTANGTGGgt ] [+] EMBL CD116997 [ GCAGGTAATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAATAAAATAGGTTTTCTACTGAATGTGTAGGCAGACAGCAAGCCACCAATATACCTAATATTGAATTCAAACACCGATACTTGAGTGTTTTTATTAAAATCCAGATTCGTTTCTATCCATTCTACAGCTGTATTGAATTCTTTGTTCAAATTCATTATGTACAAAGTGTCCAAACTATCGATTACGGAAGCCCCGAGTGGTTCATTTCCAAGCACAAAAGGTAAGTGACCAGTTTTTGAAA CCGGTCTCAATTCATTACTT CCCCATGCAT AGGTAGCATAACCATTCCAAGC AAACTTCATCATCTCTCGAACCTTATCTCGTATAGAAGCTACTGT CTCA TTTACAGGAAAGCCACCTTGAATTTCTTCCTTGGAAATAAGTGTTCCATTATTGAAAGCTGCAATTGACGGAAGCTTTTCAGAAATA ] [-] EMBL CD117402 [ AAACTATCGATTACGGAAGCCCCGAGTGGTTCATTTCCAAGCACAAAAGGTAAGTGACCAGTTTTTGAAA CCGGTCTCAATTCATTACTT CCCCATGCAT AGGTAGCATAACCATTCCAAGC AAACTTCATCATCTCTCGAACCTTATCTCGTACAGAAGCTACTGT CTCA TTTACAGGAAAGCCACCTTGAATTTCTTCCTTGGAAATAAGTGTTCCATTATTGAAAGCTGCAATTGACGGAAGCTTTTCAGAAATAGGAAGTGTTTGAGTAAGAACCTTTGTTGCATTTTCTAAAGCATCGGTTTCTATAGGTATTTGTGCAGGTGGTTGGATTTGACGAGAATCCTGGTCAGACTCTGGAATGTTAGGTGGTGGTCCGATTATCTGTGGCTTTGGGACCACACTAGGTAATTTAAGAATCTTTTCTTCA ] [-] EMBL CD161784 [ CAAGCACAAAAGGTAAGTGACCAGTTTTTGAAAGCGGGTCTCAATTCATTACTTCCCCCATGCATAAGGTAGCATACCCATTCCAAACAAAACTTCATC TCTTTCGAACCTTATTTTGGATAGAAAGT CTGTGTTCACTTTACAGGAAAGCCACCTTGAATTTCCTCCTTGGAAATAAGTGGTCCAATATTGAAAGCTGCCATTGACGGAAGCTTTTCAAGAATAAGAAGTGGTTAAGTAAGAACCTTTGTTGCATTTTCTAAAGCATCGGTTTCTATAGGTATTTGTGCAGGTGGTTGGATTTGACGAGAATCCTGGTCAGACTCTGGAATGTTAGGTGGTGGTCCGATTATCTGTGGCTTTGGGACCACACTAGGTAATTTAAGAATCTTTTCTTCAAACAAGTAGTTGTTAAGTAAACTTGTTGTGACAAAGATTATTATGACAACTAGAATTAAGTGAAAAATACGTCGACATCGGAAACTTCGGACTCGTAATTTCATATTTTTCACTATAGATAGGGAGTCTGCATACACACCT ] [+] EMBL CD183917 [ CATCATCTCTCGAACCTTATCTCGTATAGAAGCTACTGT CTCA TTTACAGGAAAGCCACCTTGAATTTCTTCCTTGGAAATAAGTGTTCCATTATTGAAAGCTGCAATTGACGGAAGCTTTTCAGAAATAGGAAGTGTTTGAGTAAGAACCTTTGTTGCATTTTCTAAAGCATCGGTCTCTATAGGTATTTGTGCAGGTGGTTGGATTTGACGAGAATCCTGGTCACACTCTGGAATGTTACGTGGTGGTC ] [-] EMBL CD078187 [ CTTTTCTTCAAACAAGTAGTTGTTAAGTAAACTTGTTGTGACAAAGATTATTATGACAACTAGAATTAAGTGAAAAATACGTCGACATCGGAAACTTCGGACTCGTAATTTCATATTTTTCACTATAGATAGGGAGTCTGCATACACACCTTACACCGGTCTTAGATTCCGCGCTCAGACCAGTTTCTTTACACACCCG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||