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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10337#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1965 fasta sequence
[TTATAGAATCTACGAGAGACAAACAGTAGTAAAACAACTCAGAAGGATGAGAGAAATACAGATTTTGCACAAAATAAAACTTTGGACATTGGGAGAATTATTATCATCAACATCAAAAATATGATATCGAATGATTAGCCAGGTGTTAGTTTGACCTTATTTTGAATAGGTAATGGATGCGCTTCAGAATTGAACACCCATCTATCAAGCGGTAATAAAGTATCTTCCGAAAGTATTAAATAAAGGTATTTTAGTGTTTCTGCTAAGAAATACGACTGTTGAACATCATCTAAAGTAGAGTTAATAGAGTAAACGTCATGTAAACCAGAATAGCCAGCATTTGTACGAGCATATTTTTCAATAGCCTGAACTACATCCCATGCCCAAACACGATACTTTGGATCTTTAGTAAGTCTCCATAAATAGAAATATGATTCCACCGTTTCTGGTCGAAGAAGATACATTTTATGAGATTGAGTAATCGCGATTGCAGAAGATTGATCAGTAAATGAAAATATTTCTGGACCAAGACCTGTTGATGCACTGTCGTAACTTCTTCTACAAGTATCAGTAATTTCAACACCACGTTGAAACCATGGATCATTTTTATCTGATGCACCGAGAGAGAGCATGCCGCCAACAAAACAAGCCAAATGATCCATTGAATTTGAAATAGCGCCATATTTGTAGTTGCCAACATAAAGTAAATTATGTTGAGGACTTTTATGAAATAAGCCAACTTTTAAGAATGATTCTAAACTAGAATTGTATAATTCAAGAGCTTTCACATCTTTATGATCAGTACGAATCCATTCTTTTAATAAATATTCATAAAATGAATCACCTAATGCAGAGAGACCAGCTTCATTACCACACCATGATTTTGTATTCGGATTCATAAAATTAAGAAATAATCCATTAGGTCTGTCCACTTCCTCCAAAATCTTACGAATAGCATCAACCTTTTCTGAGTAGACTGGATTACCAGTTAACTCAGAAAGATATTTAAATTCCATATGTAATGTACCAAACTCTGATAGAATTGAACATCGACCATTTGCCCAGACAAAATTCCGTTTATCTCCCGTTTTCAAATTGATTAAACTCATTGGAATTCCACTAGGTGTATCAAATGCAGGTAATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAATAAAATAGGTTTTCTACTGAATGTGTAGGCAGACAGCAAGCCACCAATATACCTAATATTGAATTCAAACACCGATACTTGAGTGTTTTTATTAAAATCCAGATTCGTTTCTATCCATTCTACAGCTGTATTGAATTCTTTGTTCAAATTCATTATGTACAAAGTGTCCAAACTATCGATTACGGAAGCCCCGAGTGGTTCATTTCCAAGCACAAAAGGTAAGTGACCAGTTTTTGAAA-CCGGTCTCAATTCATTACTT-CCCCATGCAT-AGGTAGCATAACCATTCCAAGC-AAACTTCATCATCTCTCGAACCTTATCTCGTATAGAAGCTACTGT-CTCA-TTTACAGGAAAGCCACCTTGAATTTCTTCCTTGGAAATAAGTGTTCCATTATTGAAAGCTGCAATTGACGGAAGCTTTTCAGAAATAGGAAGTGTTTGAGTAAGAACCTTTGTTGCATTTTCTAAAGCATCGGTTTCTATAGGTATTTGTGCAGGTGGTTGGATTTGACGAGAATCCTGGTCAGACTCTGGAATGTTAGGTGGTGGTCCGATTATCTGTGGCTTTGGGACCACACTAGGTAATTTAAGAATCTTTTCTTCAAACAAGTAGTTGTTAAGTAAACTTGTTGTGACAAAGATTATTATGACAACTAGAATTAAGTGAAAAATACGTCGACATCGGAAACTTCGGACTCGTAATTTCATATTTTTCACTATAGATAGGGAGTCTGCATACACACCTTACACCGGTCTTAGATTCCGCGCTCAGACCAGTTTCTTTACACACCCG]
[+] EMBL CD152961 [TTATAGAATCTACGAGAGACAAACAGTAGTAAAACAACTCAGAAGGATGAGAGAAATACAGATTTTGCACAAAATAAAACTTTGGACATTGGGAGAATTATTATCATCAACATCAAAAATATGATATCGAATGATTAGCCAGGTGTTAGTTTGACCTTATTTTGAATAGGTAATGGATGCGCTTCAGAATTGAACACCCATCTATCAAGCGGTAATAAAGTATCTTCCGAAAGTATTAAATAAAGGTATTTTAGTGTTTCTGCTAAGAAATACGACTGTTGAACATCATCTAAAGTAGAGTTAATAGAGTAAACGTCATGTAAACCAGAATAGCCAGCATTTGTACGAGCATATTTTTCAATAGCCTGAACTACATCCCATGCCCAAACACGATACTTTGGATCTTTAGTAAGTCTCCATAAATAGAAATATGATTCCACCGTTTCTGGTCGAAGAAGATACATTTTATGAGATTGAGTAATCGCGATTGCAGAAGATTGATCAGTAAATGAAAATATTTCTGGACCAAGACCTGTTGATGCACTGTCGTAACTTCTTCTACAAGTATCAGTAATTTCAACACCACGTTGAAACCATGGATCATTNTTATCTGATGCACCGAGAGAGAGCATGCCGCCAACAAAACAAGCCAAATGATCCATT ]
[+] EMBL CD162964 [ CATTTGTACGAGCATATTTTTCAATAGCCTGAACTACATCCCATGCCCAAACACGATACTTTGGATCTTTAGTAAGTCTCCATAAATAGAAATATGATTCCACCGTTTTTGGTCGAAGAAGATACATTTTATGAGATTGAGTAATCGCGATTGCAGAAGATTGATCAGTAAATGAAAATATTTCTGGACCAAGACCTGTTGATGCACTATCGTAACTTCTTCTACAAGTATCAGTAATTTCAACACCACGTTGAAACCATGGATCATTTTTAT ]
[-] EMBL CD162690 [ ATTTGTACGAGCATATTTTTCAATAGCCTGAACTACATCCCATGCCCAAACACGATACTTTGGATCTTTAGTAAGTCTCCATAAATAGAAATATGATTCCACCGTTTCTGGTCGAAGAAGATACATTTTATGAGATTGAGTAATCGCGATTGCAGAAGATTGATCAGTAAATGAAAATATTTCTGGACCAAGACCTGTTGATGCACTATCGTAACTTCTTCTACAAGTATCAGTAATTTCAACACCACGTTGAAACCATGGATCATTTTTATC ]
[-] EMBL CD153243 [ TACGAGCATA TTTTCAATAGCCTGANCTACATCNCATGCCCAAACACGATACTTTGGATCTTTAGTAAGTCTCCATAAATAGAAATATGATTCCACCGTTTCTGGTCGAAGAAGATACATTNTATGAGATTGAGTAATCGCGATTGCAGAAGATTGATCAGTAAATGAAAATATTTCTGGACCAAGACCTGTTGATGCACTGTCGTAACTTCTTCTACAAGTATCAGTAATTTCAACACCACGTTGAAACCATGGATCATTTTTATCTGATGCACCGAGAGAGAGCATGCCGCCAACAAAACAAGCCAAATGATCCATTGAATTTGAAATAGCGCCATATTTGTAGTTGCCAACATAAAGTAAATTATGTTGAGGACTTTTATGAAATAAGCCAACTTTTAAGAATGATTCTAAACTAGAATTGTATAATTCAAGAGCTTTCACATCTTTATGATCAGTACGAATCCATTCTTTTAATAAATATTCATAAAATGAATCACCTAATGCAGAGAGACCAGCTTCATTACCACACCATGATTTTGTATTCGGATTCATAAAATTAAGAAATAATCCATTAGGTCTGTCCACTTCCTCCAAAATCTTAC ]
[-] EMBL CD152642 [ CCATGCCCAAACACGATACTTTGGATCTTTAGTAAGTCTCCATAAATAGAAATATGATTCCACCGTTTCTGGTCGAAGAAGATACATTTTATGAGATTGAGTAATCGCGATTGCAGAAGATTGATCAGTAAATGAAAATATTTCTGGACCAAGACCTGTTGATGCACTGTCGTAACTTCTTCTACAAGTATCAGTAATTTCAACACCACGTTGAAACCATGGATCATTTTTATCTGATGCACCGAGAGAGAGCATGCCGCCAACAAAACAAGCCAAATGATCCATTGAATTTGAAATAGCGCCATATTTGTAGTTGCCAACATAAAGTAAATTATGTTGAGGACTTTTATGAAATAAGCCAACTTTTAAGAATGATTCTAAACTAGAATTGTATAATTCAAGAGCTTTCACATCTTTATGATCAGTACGAATCCATTCTTTTAATAAATATTCATAAAATGAATC ]
[+] EMBL CD196462 [ CTTTATGATCAGTACGAATCCATTCTTTTAATAAATATTCATAAAATGAGTCACCTAATGCAGAGAGACCAGCTTCATTACCACACCATGATTTTGTATTCGGATTCATAAAATTAAGAAATAATCCATTAGGTCTGTCCACTTCCTCCAAAATCTTACGAATAGCATCAACCTTTTCTGAGTAGACTGGATTACCAGTTAACTCAGAAAGATATTTAAATTCCATATGTAATGTACCAAACTCTGATAGAATTGAACATCGACCATTTGCCCAGACAAAATTCCGTTTATCTCCCGTTTTCAAATTGATTAAACTCATTGGAATTCCACTAGGTGTATCAAATGCAGGTAATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAATAAAATAGGTTTTCTACTGAATGTGTAGGCAGACAGCAAGCCACCAATATACCTTATATTGAATTCAAACACCGAT ]
[-] EMBL CD147531 [ CACACCATGATTTTGTATTCGGATTCATAAAATTAAGAAATAATCCATTAGGTCTGTCCACTTCCTCCAAAATCTTACGAATAGCATCAACCTTTTCTGAGTAGACTGGATTACCAGTTAACTCAGAAAGATATTTAAATTCCATATGTAATGTACCAAACTCTGATAGAATTGAACATCGACCATTTGCCCAGACAAAATTCCGTTTATCTCCCGTTTTCAAATTGATTAAACTCATTGGAATTCCACTAGGTGTATCAAATGCAGGTAATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAATAAAATAGGTTTTCTACTGAATGTGTAGGCAGACAGCAAGCCACCAATATACCTA ]
[+] EMBL CD123309 [ GAATAGCATCAACCTTTTCTGAGTAGACTGGATTACCAGTTAACTCAGAAAGATATTTAAATTCCATATGTAATGTACCAAACTCTGATAGAATTGAACATCGACCATTTGCCCAGACAAAATTCTGTTTATCTCCCGTTTTCAAATTGATTAAACTCATTGGAATTCCACTAGGTGTATCAAATGCAGGTAATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAATAAAATA ]
[+] EMBL CD111546 [ TGCAGGGTATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAACAAAATAGGTTTTCTACTGAATGTGTAGGCAGACAGCAAGCCACCAATATACCCAATATTGAATTCAAACACCGATACTTGAGTGTTTTTATTAAAATCCAGATTCGTTTCTATCCATTCTACAGCTGTATTGAATTCTTTGTTCAAATTCATTATGTACAAAGTGTCCAAACTATCGATTACGGAAGCCCCGAGTGGTTCATTTCCAAGCACAAAAGGTAAGTGACCAGTTTTTGAAA CCGGTCTCAATTCATTA ]
[+] EMBL CD117115 [ GCAGGTAATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAATAAAATAGGTTTTCTACTGAATGTGTAGGCAGACAGCAAGCCACCAATATACCTAATATTGAATTCAAACACCGATACTTGAGTGTTTTTATTAAAATCCAGATTCGTTTCTATCCATTCTACAGCTGTATTGAATTCTTTGTTCAAATTCATTATGTACAAAGTGTCCAAACTATCGATTACGGAAGCCCCGAGTGGTTCATTTCCAAGCACAAAAGGTAAGTGACCAGTTTTTGAAA CCGGTCTCAATTCATTACTT CCCCATGCAT AGGTAGCATAACCATTCCAAGC AAACTTCATCATCTCTCGAACCTTATCTCGTATAGAAGCTACTGT CTCA TTTACAGGAAAGCCACCTTGAATTTCTTCCTTGGAAATAAGTGTTCCATTATTGAAAGCTGCAATTGACGGAAGCTTTTCAGAAATAGGAAGTGTTTGAGTAAGAACCTTTGTTGCATTTTCTAAAGCATCGGTTTCTATAGGTATTTGTGCAGGTGGTTGGATTTGACGAGAATCCTGGTCAGACTCTGGAATGTTANGTGGgt ]
[+] EMBL CD116997 [ GCAGGTAATAAACGTTGAGCAAGTTCAGCCGCTTTGGTCAATAAAATAGGTTTTCTACTGAATGTGTAGGCAGACAGCAAGCCACCAATATACCTAATATTGAATTCAAACACCGATACTTGAGTGTTTTTATTAAAATCCAGATTCGTTTCTATCCATTCTACAGCTGTATTGAATTCTTTGTTCAAATTCATTATGTACAAAGTGTCCAAACTATCGATTACGGAAGCCCCGAGTGGTTCATTTCCAAGCACAAAAGGTAAGTGACCAGTTTTTGAAA CCGGTCTCAATTCATTACTT CCCCATGCAT AGGTAGCATAACCATTCCAAGC AAACTTCATCATCTCTCGAACCTTATCTCGTATAGAAGCTACTGT CTCA TTTACAGGAAAGCCACCTTGAATTTCTTCCTTGGAAATAAGTGTTCCATTATTGAAAGCTGCAATTGACGGAAGCTTTTCAGAAATA ]
[-] EMBL CD117402 [ AAACTATCGATTACGGAAGCCCCGAGTGGTTCATTTCCAAGCACAAAAGGTAAGTGACCAGTTTTTGAAA CCGGTCTCAATTCATTACTT CCCCATGCAT AGGTAGCATAACCATTCCAAGC AAACTTCATCATCTCTCGAACCTTATCTCGTACAGAAGCTACTGT CTCA TTTACAGGAAAGCCACCTTGAATTTCTTCCTTGGAAATAAGTGTTCCATTATTGAAAGCTGCAATTGACGGAAGCTTTTCAGAAATAGGAAGTGTTTGAGTAAGAACCTTTGTTGCATTTTCTAAAGCATCGGTTTCTATAGGTATTTGTGCAGGTGGTTGGATTTGACGAGAATCCTGGTCAGACTCTGGAATGTTAGGTGGTGGTCCGATTATCTGTGGCTTTGGGACCACACTAGGTAATTTAAGAATCTTTTCTTCA ]
[-] EMBL CD161784 [ CAAGCACAAAAGGTAAGTGACCAGTTTTTGAAAGCGGGTCTCAATTCATTACTTCCCCCATGCATAAGGTAGCATACCCATTCCAAACAAAACTTCATC TCTTTCGAACCTTATTTTGGATAGAAAGT CTGTGTTCACTTTACAGGAAAGCCACCTTGAATTTCCTCCTTGGAAATAAGTGGTCCAATATTGAAAGCTGCCATTGACGGAAGCTTTTCAAGAATAAGAAGTGGTTAAGTAAGAACCTTTGTTGCATTTTCTAAAGCATCGGTTTCTATAGGTATTTGTGCAGGTGGTTGGATTTGACGAGAATCCTGGTCAGACTCTGGAATGTTAGGTGGTGGTCCGATTATCTGTGGCTTTGGGACCACACTAGGTAATTTAAGAATCTTTTCTTCAAACAAGTAGTTGTTAAGTAAACTTGTTGTGACAAAGATTATTATGACAACTAGAATTAAGTGAAAAATACGTCGACATCGGAAACTTCGGACTCGTAATTTCATATTTTTCACTATAGATAGGGAGTCTGCATACACACCT ]
[+] EMBL CD183917 [ CATCATCTCTCGAACCTTATCTCGTATAGAAGCTACTGT CTCA TTTACAGGAAAGCCACCTTGAATTTCTTCCTTGGAAATAAGTGTTCCATTATTGAAAGCTGCAATTGACGGAAGCTTTTCAGAAATAGGAAGTGTTTGAGTAAGAACCTTTGTTGCATTTTCTAAAGCATCGGTCTCTATAGGTATTTGTGCAGGTGGTTGGATTTGACGAGAATCCTGGTCACACTCTGGAATGTTACGTGGTGGTC ]
[-] EMBL CD078187 [ CTTTTCTTCAAACAAGTAGTTGTTAAGTAAACTTGTTGTGACAAAGATTATTATGACAACTAGAATTAAGTGAAAAATACGTCGACATCGGAAACTTCGGACTCGTAATTTCATATTTTTCACTATAGATAGGGAGTCTGCATACACACCTTACACCGGTCTTAGATTCCGCGCTCAGACCAGTTTCTTTACACACCCG]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||