cluster # 10341

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Schistosoma mansoni
cluster # 10341 cluster # 10341 Sequences # 15 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10341#0 length = 1211 sequences # 11

consensus_10341#1 length = 753 sequences # 3
consensus_10341#2 length = 578 sequences # 1

consensusID : consensus_10341#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1211
fasta sequence

                              [CGAATTCGGCACGAGGTCTAATGACCCTTCTAAATTTGACAATATCAATGATGAAGGTTTATTAGTATATGATACTTTACCCGTCATTCCAACATCAATTGACTCATCATCATCATCTTCATCGTCGCCGTCGTCGTCAGTATTACTGCCAACATCACCAACATCATTACCTATCTCCTCATCAATACCAAATGAAGAAGAAGAAACACTTCGTTTACAATTAGCATTAGCTTTACAAATTGATTCAGAATTGAATAAAGCAATGAATTTAGAGAATGCTGCTAGTGAATCAATTCAACAAGCTAATTTATTAAATAAAGAAGCTAATGAAGCTAAATATCGTGCACAAATTGCTGAACATATGTTGAACTCATTAAAACAATTATGGAATATCATTAATAACAATAATGATGATGATGATAATACAAGTTATGAGAAGAGAGGATTTATAGAAGTACCCAAAATAAATCAAGACTATTTACTTGATGAAGAAGTTGGCGGTCAACTTATTGATACTGGTCATGATGATGATAATAGAGAGAAACGTAATCAAGAACATCGTGAACGACATCATCATCATCAACGTTATTATAATATGAAGAAAAGGAGGAATCTCTACAGTATATCTGATTACCCTAATCATGAAGACGATGCTGACGATGATGATGATAAGAATATGATACTCAATGATTCTGAACCAACTATTGAAAAATTACATAGAACTAAACAACTCACTTTAGAAAAGATACGTTTATTGATTTTAAGACAATTAATCAAACAACAAAGAAAGGCC---GAAGAAGAAGAAGAAGAA---CAAGAAAAGGATAAAGGAAGAACAGGTGATGAACATCAACGCGACCTTCATCATTATGATCATCCTCATGGTAACAATAATAATGACATTCATTATGATCTACAACTTGATAGAAATGATATCCCTTTACAAATGATGAATCCCTATCCAAATCTTTATGACAGTTTACAAACTTGGAAGGAAAA-GGACAATGATGATGACGATGATGATAGTAATGGAATTAATATAGATATGAATGAAAGGAATCGTCATGGAATTATAAAACACCATCCATGGAAGTCATTATCTCATTTAAATTCATTA-GATAAAGATGATTCAATAGTATTTAGATGAACAAATTCTTGAAAATAAATAAGAAACAAAGCAATATACTTGGAAAGAAATACAGAAAAT-ATATATA]

[+] EMBL CD084185             [CGAATTCGGCACGAGGTCTAATGACCCTTCTAAATTTGACAATATCAATGATGAAGGTTTATTAGTATATGATACTTTACCCGTCATTCCAACATCAATTGACTCATCATCATCATCTTCATCGTCGCCGTCGTCGTCAGTATTACTGCCAACATCACCAACATCATTACCTATCTCCTCATCAATACCAAATGAAGAAGAAGAAACACTTCGTTTACAATTAGCATTAGCTTTACAAATTGATTCAGAATTGAATAAAGCAATGAATTTAGAGAATGCTGCTAGTGAATCAATTCAACAAGCTAATTTATTAAATAAAGAAGCTAATGAAGCTAAATATCGTGCACAAATTGCTGAACATATGTTGAACTCATTAAAACAATTATGGAATATCATTAATAACAATAATGATGATGATGATAATACAAGTTATGAGAAGAGAGGATTTATAGAAGTACCCAAAATAAATCAAGACTATTTACTTGATGAAGAAGTTGGCGGTCAACTTATTGATACTGGTCATGATGATGATAATAGAGAGAAACGTAATCAAGAACATCGTGAACGACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD161406             [                                                                                                                                                                                                                                                                      ATGAATTTAGAGAATGCTGCTAGTGAATCAATTCAACAAGCTAATTTATTAAATAAAGAAGCTAATGAAGCTAAATATCGTGCACAAATTGCTGAACATATGTTGAACTCATTAAAACAATTATGGAATATCATTAATAACAATAATGATGATGATGATACTACAAGTTATGAGAAGGGAGGATTTATAGAAGTACCCAAAATAAATCAAGACTATTTACTTGATGAAGAAGTTGGCGGTCAACTTATTGATACTGGTCATGATGATGATAATAGAGAGAAACGTAATCAAGAACATCGTGAACGACATCATCATCATCAACGTTATTATAATATGAAGAAAAGGAGGAATCTCTACAGTATATCTGATTACCCTAATCATGAAGACGATGCTGACGATGATGATGATAAGAATATGATACTCAATGATTCTGAACCAACTATTGAAAAATTACATAGAACTAAACAACTCACTTTAGAAAAGATACGTTTATTGATCTTAAGACAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD185394             [                                                                                                                                                                                                                                                                                                                                                                                                             AATAACAATAATGATGATGATGATAATACAAGTTATGAGAAGAGAGGATTTATAGAAGTACCCAAAATAAATCAAGACTATTTACTTGATGAAGAAGTTGGCGGTCAACTTATTGATACTGGTCATGATGATGATAATAGAGAGAAACGTAATCAAGAACATCGTGAACGACATCATCATCATCAACGTTATTATAATATGAAGAAAAGGAGGAATCTCTACAGTATATCTGATTACCCTAATCATGAAGACGATGCTGACGATGATGATGATAAGAATATGATACTCAATGATTCTGAACCAACTATTGAAAAATTACATAGAACTAAACAACTCACTTTAGAAAAGATACGTTTATTGATTTTAAGACAATTAATCAAACAACAAAGAAAGGCC   GAAGAAGAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD080519             [                                                                                                                                                                                                                                                                                                                                                                                                                 aggATAATGATGATGATGATAATACAAGTTATGAGAAGAGAGGATTTATAAAAGTACCCAAAATAAATCAAGACTATTTACTTGATGAAGAAGTTGGCGGTCAACTTATTGATACTGGTCATGATGATGATAATAGAGAGAAACGTAATCAAGAACATCGTGAACGACATCATCATCATCAACGTTATTATAATATGAAGAAAAGGAGGAATCTCTACAGTATATCTGATTACCCTAATCATGAAGACGATGCTGACGATGATGATGATAAGAATATGATACTCAATGATTCTGAACCAACTATTGAAAAATTACATAGAACTAAACAACTCACTTTAGAAAAGATACGTTTATTGATTTTAAGACAATTAATCAAACAACAAAGAAAGGCCGAAGAAGAAGAAGAAGAAGAA   CAAGAAAAGGATAAAGGAAGAACAGGTGATGAACATCAACGCGACCTTCATCATTATGATCATCCTCATGGTAACAATAATAATGACATTCATTATGATCTACAACTTGATAGAAATGATATCCCTTTACAAATGATGAATCCCTATCCAAATCTTTATGACAGTTTACNAACTTGGAAAGAAAAGGGAC ATGATGATGACGATGATGATAGTAATGGAATTAATATAGA                                                                                                                                                                            ]
[+] EMBL CD079353             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGAAGAGAGGATTTATAGAAGTACCCAAAATAAATCAAGACTATTTACTTGATGAAGAAGTTGGCGGTCAACTTATTGATACTGGTCATGATGATGATAATAGAGAGAAACGTAATCAAGAACATCGTGAACGACATCATCATCATCAACGTTATTATAATATGAAGAAAAGGAGGAATCTCTACAGTATATCTGATTACCCTAATCATGAAGACGATGCTGACGATGATGATGATAAGAATATGATACTCAATGATTCTGAACCAACTATTGAAAAATTACATAGAACTAAACAACTCACTTTAGAAAAGATACGTTTATTGATTTTAAGACAATTAATCAAACAACAAAGAAAGGCC   GAAGAAGAAGAAGAAGAA   CAAGAAAAGGATAAAGGAAGAACAGGTGATGAACATCAACGCGACCTTCATCATTATGATCATCCTCATGGTAACAATAATAATGACATTCATTATGATCTACAACTTGATAGAAATGATATCCCTTTACAAATGATGAATCCCTATCCAAATCTTTATGACAGTTTACAAACTTGGAAGGAAAA GGACAATGATGATGACGATGATGATAGTAATGGAATTAATATAGATATGAATGANAGGAATCGTCATGGAATTATANAACACCATCCATGGAAGTCATTATCTCATTTAAATTCATTANGAT AAGATGATTCANTAGTATTTAGATGAACNNAATCTTGAAAATAAAT AG AACCAAGC ATATACTGGNNAAGANNTAC GAATTT ATATttt]
[+] EMBL CD185323             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GATAATAGAGAGAAACGTAATCAAGAACATCGTGAACGACATCATCATCATCAACGTTATTATAATATGAAGAAAAGGAGGAATCTCTACAGTATATCTGATTACCCTAATCATGAAGACGATGCTGACGATGATGATGATAAGAATATGATACTCAATGATTCTGAACCAACTATTGAAAAATTACATAGAACTGAACAACTCACTTTAGAAAAGATACGTTTATTGATTTTAAGACAATTAATCAAACAACAAAGAAAGGCC   GAAGAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD073835             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGAACATCGTGAACGACATCATCATCATCAACGTTATTATAATATGAAGAAAAGGAGGAATCTCTACAGTATATCTGATTACCCTAATCATGAAGACGATGCTGACGATGATGATGATAAGAATATGATACTCAATGATTCTGAACCAACTATTGAAAAATTACATAGAACTAAACAACTCACTTTAGAAAAGATACGTTTATTGATTTTAAGACAATTAATCAAACAACAAAGAAAGGCC   GAAGAAGAAGAAGAAGAA   CAAGAAAAGGATAAAGGAAGAACAGGTGATGAACATCAACGCGACCTTCATCATTATGATCATCCTCATGGTAACAATAATAATGACATTCATTATGATCTACAACTTGATAGAAATGATATCCCTTTACAAATGATGAATCCCTATCCAAATCTTTATGACAGTTTACAAACTTGGAAGGAAAA GGACAATGATGATGACGATGATGATAGTAATGGAATTAATATAGATATGAATGAAAGGAATCGTCATGGAATTATAAAACACCATCCATGGAAGTCATTATCTCATTTAAATTCATTA GATAAAGATGATTCAATAGTATTTAGATGAACAAATTCTTGAAAATAAATAAGAAACAAAGCAATATACTTGGAAAGAAATACA AAAAT ATATATA]
[-] EMBL CD074431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AACATCGTGAACGACATCATCATCATCAACGTTATTATAATATGAAGAAAAGGAGGAATCTCTACAGTATATCTGATTACCCTAATCATGAAGACGATGCTGACGATGATGATGATAAGAATATGATACTCAATGATTCTGAACCAACTATTGAAAAATTACATAGAACTAAACAACTCACTTTAGAAAAGATACGTTTATTGATTTTAAGACAATTAATCAAACAACAAAGAAAGGCCGAAGAAGAAGAAGAAGAAGAA   CAAGAAAAGGATAAAGGAAGAACAGGTGATGAACATCAACGCGACCTTCATCATTATGATCATCCTCATGGTAACAATAATAATGACATTCATTATGATCTACAACTTGATAGAAATGATATCCCTTTACAAATGATGAATCCCTATCCAAATCTTTATGACAGTTTACAAACTTGGAAAGAAAA GGACAATGATGATGACGATGATGATAGTAATGGAATTAATATAGATATGAATGAAAGGAATCGTCATGGAATTATAAAACACCATCCATGGAAGTCATTATCTCATTTAAATTCATTA GATAAAGATGATTCAATAGTATTTAGATGAACAAATTCTTGAAAATAAATAAGAAACAAAGCAATATACTTGGAAAGAAATACAGAAANT ATATATA]
[-] EMBL CD073630             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATATGAAGAAAAGGAGGAATCTCTACAGTATATCTGATTACCCTAATCATGAAGACGATGCTGACGATGATGATGATAAGAATATGATACTCAATGATTCTGAACCAACTATTGAAAAATTACATAGAACTAAACAACTCACTTTAGAAAAGATACGTTTATTGATTTTAAGACAATTAATCAAACAACAAAGAAAGGCC   GAAGAAGAAGAAGAAGAA   CAAGAAAAGGATAAAGGAAGAACAGGTGATGAACATCAACGCGACCTTCATCATTATGATCATCCTCATGGTAACAATAATAATGACATTCATTATGATCTACAACTTGATAGAAATGATATCCCTTTACAAATGATGAATCCCTATCCAAATCTTTATGACAGTTTACAAACTTGGAAGGAAAA GGACAATGATGATGACGATGATGATAGTAATGGAATTAATATAGATATGAATGAAAGGAATCGTCATGGAATTATAAAACACCATCCATGGAAGTCATTATCTCATTTAAATTCATTA GATAAAGATGATTCAATAGTATTTAGATGAACAAATTCTTGAAAATAAATAAGAAACAAAGCAATATAC TGGAAAGAAATACAG AAAT ATATATA]
[-] EMBL CD077208             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGAAAAGGAGGAATCTCTACAGTATATCTGATTACCCTAATCATGAAGACGATGCTGACGATGATGATGATAAGAATATGATACTCAATGATTCTGAACCAACTATTGAAAAATTACATAGAACTAAACAACTCACTTTAGAAAAGATACGTTTATTGATTTTAAGACAATTAATCAAACAACAAAGAAAGGCC   GAAGAAGAAGAAGAAGAA   CAAGAAAAGGATAAAGGAAGAACAGGTGATGAACATCAACGCGACCTTCATCATTATGATCATCCTCATGGTAACAATAATAATGACATTCATTATGATCTACAACTTGATAGAAATGATATCCCTTTACAAATGATGAATCCCTATCCAAATCTTTATGACAGTTTACAAACTTGGAAGGAAAA GGACAATGATGATGACGATGATGATAGTAATGGAATTAATATAGATATGAATGAAAGGAATCGTCATGGAATTATAAAACACCATCCATGGAAGTCATTATCTCATTTAAATTCATTA GATAAAGATGATTCAATAGTATTTAGATGAACAAATTCTTGAAAATAAATAAGAAACAAAGCAATATACTTGGAAAGAAATACAGAAAGTGATATATA]
[-] EMBL CD076800             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACTCACTTTAGAAAAGATACGTTTATTGATTTTAAGACAATTAATCAAACAACAAAGAAAGGCC   GAAGAAGAAGAAGAAGAAGACCAAGAAAAGGATAAAGGAAGAACAGGTGATGAACATCAACGCGACCTTCATCATTATGATCATCCTCATGGTAACAATAATAATGACATTCATTATGATCTACAACTTGATAGAAATGATATCCCTTTACAAATGATGAATCCCTATCCAAATCTTTATGACAGTTTACAAACTTGGAAAGAAAA GGACAATGATGATGACGATGATGATAGTAATGGAATTAATATAGATATGAATGAAAGGAATCGTCATGGAATTATAAAACACCATCCATGGAAGTCATTATCTCATTTAAATTCATTA GATAAAGATGATTCAATAGTATTTAGATGAACAAATTCTTGAAAATAAATAAGAAACAAAGCAATATACTTGGAAAGAAATACAG AAAT ATATATA]




>consensus_10341#0
CGAATTCGGCACGAGGTCTAATGACCCTTCTAAATTTGACAATATCAATGATGAAGGTTT
ATTAGTATATGATACTTTACCCGTCATTCCAACATCAATTGACTCATCATCATCATCTTC
ATCGTCGCCGTCGTCGTCAGTATTACTGCCAACATCACCAACATCATTACCTATCTCCTC
ATCAATACCAAATGAAGAAGAAGAAACACTTCGTTTACAATTAGCATTAGCTTTACAAAT
TGATTCAGAATTGAATAAAGCAATGAATTTAGAGAATGCTGCTAGTGAATCAATTCAACA
AGCTAATTTATTAAATAAAGAAGCTAATGAAGCTAAATATCGTGCACAAATTGCTGAACA
TATGTTGAACTCATTAAAACAATTATGGAATATCATTAATAACAATAATGATGATGATGA
TAATACAAGTTATGAGAAGAGAGGATTTATAGAAGTACCCAAAATAAATCAAGACTATTT
ACTTGATGAAGAAGTTGGCGGTCAACTTATTGATACTGGTCATGATGATGATAATAGAGA
GAAACGTAATCAAGAACATCGTGAACGACATCATCATCATCAACGTTATTATAATATGAA
GAAAAGGAGGAATCTCTACAGTATATCTGATTACCCTAATCATGAAGACGATGCTGACGA
TGATGATGATAAGAATATGATACTCAATGATTCTGAACCAACTATTGAAAAATTACATAG
AACTAAACAACTCACTTTAGAAAAGATACGTTTATTGATTTTAAGACAATTAATCAAACA
ACAAAGAAAGGCCGAAGAAGAAGAAGAAGAACAAGAAAAGGATAAAGGAAGAACAGGTGA
TGAACATCAACGCGACCTTCATCATTATGATCATCCTCATGGTAACAATAATAATGACAT
TCATTATGATCTACAACTTGATAGAAATGATATCCCTTTACAAATGATGAATCCCTATCC
AAATCTTTATGACAGTTTACAAACTTGGAAGGAAAAGGACAATGATGATGACGATGATGA
TAGTAATGGAATTAATATAGATATGAATGAAAGGAATCGTCATGGAATTATAAAACACCA
TCCATGGAAGTCATTATCTCATTTAAATTCATTAGATAAAGATGATTCAATAGTATTTAG
ATGAACAAATTCTTGAAAATAAATAAGAAACAAAGCAATATACTTGGAAAGAAATACAGA
AAATATATATA

consensusID : consensus_10341#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 753
fasta sequence

                              [GGCCAAGATTCGGCACGAGGGTTGATAATGCCAAAGCATGAGTAAAGAAAAGTACAGAACAACAACGTCAACAACCATAGTAGTCTACATTTACAATAGAGTATACTAATGAATTGAATAGTATACTTGTAAAGTATACATGCTTCCTCCTATCTATATACTTTATAAAGACAAGAATATATATACATCTTTGATATTACATAATATATGCTCTGGAATCTATACAGTATNTATACCTTAGTAACTACTTTACTTTAATGTTCTAAGATATACATCTAGTTCACCATTGAATTCAATAGATTATGTGAATTCTAATGACCCTTCTAAATTTGACAATATCAATGATGAAGGTTTATTAGTATATGATACTTTACCCGTCATTCCAACATCAATTGACTCATCATCATCATCTTCATCGTCGCCGTCGTCGTCAGTATTACTGCCAACATCACCAACATCATTACCTATCTCCTCATCAATACCAAATGAAGAAGAAGAAACACTTCGTTTACAATTAGCATTAGCTTTACAAATTGATTCAGAATTGAATAAAGCAATGAATTTAG-AGAATGCTGCTAGTGAATCAATTCAACAAGCTAATTTATTAAATAAAGAAGCTAATGAAGCTAAATATCGTGCACAAATTGCTGAACATATGTTGAACTCATTAAAACAATTATGGAATATCATTAATAACAATAATGATGATGATGATAATACAAGTTATGAGAAGAGAGGATTTATAGAAGTACC]

[+] EMBL CD078112             [GGCCAAGATTCGGCACGAGGGTTGATAATGCCAAAGCATGAGTAAAGAAAAGTACAGAACAACAACGTCAACAACCATAGTAGTCTACATTTACAATAGAGTATACTAATGAATTGAATAGTATACTTGTAAAGTATACATGCTTCCTCCTATCTATATACTTTATAAAGACAAGAATATATATACATCTTTGATATTACATAATATATGCTCTGGAATCTATACAGTATNTATACCTTAGTAACTACTTTACTTTAATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD079571             [                            naattttGCACGAGGGA  ACAAGTACAGAACAACAACGTCAACAACCATAGTATTCTACATTTACAATAGAGTATACTAATGAATTGAATAGTATACTTGTAAAGTATACATGCTTCCTCCTATCTATATACTTTATAAAGACAAGAATATATATACATCTTTGATATTACATAATATATGCTCTGGAATCTATACAGTATTTATACCTTAGTAACTACTTTAC TTAATGTTCTAAGATATACATCTAGTTCACCATTGAATTCAATAGATTATGTGAATTCTAATGACCCTTCTAAATTTGACAATATCAATGATGAAGGTTTATTAGTATATGATACTTTACCCGTCATTCCAACATCAATTGACTCATCATCATCATCTTCATCGTCGCCGTCGTCGTCAGTATTACTGCCAACATCACCAACATCATTACCTATCTCCTCATCAATACCAAATGAAGAAGAAGAAACACTTCGTTTACAATTAGCATTAGCTTTACAAATTGATTCAGAATTGAATAAAGCAATGAATTTAG AGAATGCTGCTAGTGAATCAATTCAACAAGCTAATTTATTAAATAAAGAAGCTAATGAAGCTAAATATCGTGCACAAATTGCTGAACATATGTTGAACTCATTAAAACAATTATGGAATATCATTAATAACAATAATGATGATGATGATAATACAAGTTATGAGAAGAGAGGATTTATAGAAGTACC]
[+] EMBL AA791333             [                                                                                                                                                                                                                                                                                                                                                                                                                                               CAGTATTACTGCCAACATCACCAACATCATTACCTATCTCCTCATCAATACCAAATGAAGAAGAAGAAACACTTCGTTTACAATTAGCATTAGCTTTACAAATTGATTCAGAATTGAATAAAGCAATGAA TTAGAAGAATGCTGCTAGTGAATCAATTCAACAAGCTAATTTATT AATAAga                                                                                                                                           ]




>consensus_10341#1
GGCCAAGATTCGGCACGAGGGTTGATAATGCCAAAGCATGAGTAAAGAAAAGTACAGAAC
AACAACGTCAACAACCATAGTAGTCTACATTTACAATAGAGTATACTAATGAATTGAATA
GTATACTTGTAAAGTATACATGCTTCCTCCTATCTATATACTTTATAAAGACAAGAATAT
ATATACATCTTTGATATTACATAATATATGCTCTGGAATCTATACAGTATNTATACCTTA
GTAACTACTTTACTTTAATGTTCTAAGATATACATCTAGTTCACCATTGAATTCAATAGA
TTATGTGAATTCTAATGACCCTTCTAAATTTGACAATATCAATGATGAAGGTTTATTAGT
ATATGATACTTTACCCGTCATTCCAACATCAATTGACTCATCATCATCATCTTCATCGTC
GCCGTCGTCGTCAGTATTACTGCCAACATCACCAACATCATTACCTATCTCCTCATCAAT
ACCAAATGAAGAAGAAGAAACACTTCGTTTACAATTAGCATTAGCTTTACAAATTGATTC
AGAATTGAATAAAGCAATGAATTTAGAGAATGCTGCTAGTGAATCAATTCAACAAGCTAA
TTTATTAAATAAAGAAGCTAATGAAGCTAAATATCGTGCACAAATTGCTGAACATATGTT
GAACTCATTAAAACAATTATGGAATATCATTAATAACAATAATGATGATGATGATAATAC
AAGTTATGAGAAGAGAGGATTTATAGAAGTACC

consensusID : consensus_10341#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 578
fasta sequence

                              [AGCCAANAATTCGGCACGAGGCTGAATAGTATACTTGTAAAGTATACATGCTTTCTCCTATCTATATACTTTATAAAGACAAGAATATATATACATCTTTGATATTACATAATATATGCTCTGGAATCTATACAGTATTTATACCTTAGTAACTACTTTACTTAATGTTCTAAGATATACATCTAGTTCACCATTGAATTCAATAGATTATGTGAATTCTAATGACCCTTCTAAATTTGACAATATCAATGATGAAGGTTTATTAGTATATGATACTTTACCCGTCATTCCAACATCAATTGACTCATCATCATCATCTTCATCGTCGCCGTCGTCGTCAGTATTACTGCCAACATCACCAACATCATTACCTATCTCCTCATCAATACCAAATGAAGAAGAAGAAACACTTCGTTTACAATTAGCATTAGCTTTACAAATTGATTCAGAATTGAATAAAGCAATGAATTTAGAGAATGCTGCTAGTGAATCAATTCAACAAGCTAATTTATTAAATAAAGAAGCTAATGAAGCTAAATATCGTGCACAAATTGCTGAACATATNGTGAACTCATTAA]

[+] EMBL CD083229             [AGCCAANAATTCGGCACGAGGCTGAATAGTATACTTGTAAAGTATACATGCTTTCTCCTATCTATATACTTTATAAAGACAAGAATATATATACATCTTTGATATTACATAATATATGCTCTGGAATCTATACAGTATTTATACCTTAGTAACTACTTTACTTAATGTTCTAAGATATACATCTAGTTCACCATTGAATTCAATAGATTATGTGAATTCTAATGACCCTTCTAAATTTGACAATATCAATGATGAAGGTTTATTAGTATATGATACTTTACCCGTCATTCCAACATCAATTGACTCATCATCATCATCTTCATCGTCGCCGTCGTCGTCAGTATTACTGCCAACATCACCAACATCATTACCTATCTCCTCATCAATACCAAATGAAGAAGAAGAAACACTTCGTTTACAATTAGCATTAGCTTTACAAATTGATTCAGAATTGAATAAAGCAATGAATTTAGAGAATGCTGCTAGTGAATCAATTCAACAAGCTAATTTATTAAATAAAGAAGCTAATGAAGCTAAATATCGTGCACAAATTGCTGAACATATNGTGAACTCATTAA]




>consensus_10341#2
AGCCAANAATTCGGCACGAGGCTGAATAGTATACTTGTAAAGTATACATGCTTTCTCCTA
TCTATATACTTTATAAAGACAAGAATATATATACATCTTTGATATTACATAATATATGCT
CTGGAATCTATACAGTATTTATACCTTAGTAACTACTTTACTTAATGTTCTAAGATATAC
ATCTAGTTCACCATTGAATTCAATAGATTATGTGAATTCTAATGACCCTTCTAAATTTGA
CAATATCAATGATGAAGGTTTATTAGTATATGATACTTTACCCGTCATTCCAACATCAAT
TGACTCATCATCATCATCTTCATCGTCGCCGTCGTCGTCAGTATTACTGCCAACATCACC
AACATCATTACCTATCTCCTCATCAATACCAAATGAAGAAGAAGAAACACTTCGTTTACA
ATTAGCATTAGCTTTACAAATTGATTCAGAATTGAATAAAGCAATGAATTTAGAGAATGC
TGCTAGTGAATCAATTCAACAAGCTAATTTATTAAATAAAGAAGCTAATGAAGCTAAATA
TCGTGCACAAATTGCTGAACATATNGTGAACTCATTAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10341#1      GGCCAAGATTCGGCACGAGGGTTGATAATGCCAAAGCATGAGTAAAGAAAAGTACAGAAC 60
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      ------------------------------------------------------------
                                                                                   

consensus_10341#1      AACAACGTCAACAACCATAGTAGTCTACATTTACAATAGAGTATACTAATGAATTGAATA 120
consensus_10341#2      --------------------------------AGCCAANAATTCGGCACGAGGCTGAATA 28
consensus_10341#0      ------------------------------------------------------------
                                                                                   

consensus_10341#1      GTATACTTGTAAAGTATACATGCTTCCTCCTATCTATATACTTTATAAAGACAAGAATAT 180
consensus_10341#2      GTATACTTGTAAAGTATACATGCTTTCTCCTATCTATATACTTTATAAAGACAAGAATAT 88
consensus_10341#0      ------------------------------------------------------------
                                                                                   

consensus_10341#1      ATATACATCTTTGATATTACATAATATATGCTCTGGAATCTATACAGTATNTATACCTTA 240
consensus_10341#2      ATATACATCTTTGATATTACATAATATATGCTCTGGAATCTATACAGTATTTATACCTTA 148
consensus_10341#0      ------------------------------------------------------------
                                                                                   

consensus_10341#1      GTAACTACTTTACTTTAATGTTCTAAGATATACATCTAGTTCACCATTGAATTCAATAGA 300
consensus_10341#2      GTAACTACTTTACTT-AATGTTCTAAGATATACATCTAGTTCACCATTGAATTCAATAGA 207
consensus_10341#0      -----------------------------------------------CGAATTCGGCA-- 11
                                                                       ******   *  

consensus_10341#1      TTATGTGAATTCTAATGACCCTTCTAAATTTGACAATATCAATGATGAAGGTTTATTAGT 360
consensus_10341#2      TTATGTGAATTCTAATGACCCTTCTAAATTTGACAATATCAATGATGAAGGTTTATTAGT 267
consensus_10341#0      -----CGAGGTCTAATGACCCTTCTAAATTTGACAATATCAATGATGAAGGTTTATTAGT 66
                             **  **************************************************

consensus_10341#1      ATATGATACTTTACCCGTCATTCCAACATCAATTGACTCATCATCATCATCTTCATCGTC 420
consensus_10341#2      ATATGATACTTTACCCGTCATTCCAACATCAATTGACTCATCATCATCATCTTCATCGTC 327
consensus_10341#0      ATATGATACTTTACCCGTCATTCCAACATCAATTGACTCATCATCATCATCTTCATCGTC 126
                       ************************************************************

consensus_10341#1      GCCGTCGTCGTCAGTATTACTGCCAACATCACCAACATCATTACCTATCTCCTCATCAAT 480
consensus_10341#2      GCCGTCGTCGTCAGTATTACTGCCAACATCACCAACATCATTACCTATCTCCTCATCAAT 387
consensus_10341#0      GCCGTCGTCGTCAGTATTACTGCCAACATCACCAACATCATTACCTATCTCCTCATCAAT 186
                       ************************************************************

consensus_10341#1      ACCAAATGAAGAAGAAGAAACACTTCGTTTACAATTAGCATTAGCTTTACAAATTGATTC 540
consensus_10341#2      ACCAAATGAAGAAGAAGAAACACTTCGTTTACAATTAGCATTAGCTTTACAAATTGATTC 447
consensus_10341#0      ACCAAATGAAGAAGAAGAAACACTTCGTTTACAATTAGCATTAGCTTTACAAATTGATTC 246
                       ************************************************************

consensus_10341#1      AGAATTGAATAAAGCAATGAATTTAGAGAATGCTGCTAGTGAATCAATTCAACAAGCTAA 600
consensus_10341#2      AGAATTGAATAAAGCAATGAATTTAGAGAATGCTGCTAGTGAATCAATTCAACAAGCTAA 507
consensus_10341#0      AGAATTGAATAAAGCAATGAATTTAGAGAATGCTGCTAGTGAATCAATTCAACAAGCTAA 306
                       ************************************************************

consensus_10341#1      TTTATTAAATAAAGAAGCTAATGAAGCTAAATATCGTGCACAAATTGCTGAACATATGTT 660
consensus_10341#2      TTTATTAAATAAAGAAGCTAATGAAGCTAAATATCGTGCACAAATTGCTGAACATATNGT 567
consensus_10341#0      TTTATTAAATAAAGAAGCTAATGAAGCTAAATATCGTGCACAAATTGCTGAACATATGTT 366
                       *********************************************************  *

consensus_10341#1      GAACTCATTAAAACAATTATGGAATATCATTAATAACAATAATGATGATGATGATAATAC 720
consensus_10341#2      GAACTCATTAA------------------------------------------------- 578
consensus_10341#0      GAACTCATTAAAACAATTATGGAATATCATTAATAACAATAATGATGATGATGATAATAC 426
                       ***********                                                 

consensus_10341#1      AAGTTATGAGAAGAGAGGATTTATAGAAGTACC--------------------------- 753
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      AAGTTATGAGAAGAGAGGATTTATAGAAGTACCCAAAATAAATCAAGACTATTTACTTGA 486
                                                                                   

consensus_10341#1      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      TGAAGAAGTTGGCGGTCAACTTATTGATACTGGTCATGATGATGATAATAGAGAGAAACG 546
                                                                                   

consensus_10341#1      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      TAATCAAGAACATCGTGAACGACATCATCATCATCAACGTTATTATAATATGAAGAAAAG 606
                                                                                   

consensus_10341#1      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      GAGGAATCTCTACAGTATATCTGATTACCCTAATCATGAAGACGATGCTGACGATGATGA 666
                                                                                   

consensus_10341#1      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      TGATAAGAATATGATACTCAATGATTCTGAACCAACTATTGAAAAATTACATAGAACTAA 726
                                                                                   

consensus_10341#1      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      ACAACTCACTTTAGAAAAGATACGTTTATTGATTTTAAGACAATTAATCAAACAACAAAG 786
                                                                                   

consensus_10341#1      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      AAAGGCCGAAGAAGAAGAAGAAGAACAAGAAAAGGATAAAGGAAGAACAGGTGATGAACA 846
                                                                                   

consensus_10341#1      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      TCAACGCGACCTTCATCATTATGATCATCCTCATGGTAACAATAATAATGACATTCATTA 906
                                                                                   

consensus_10341#1      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      TGATCTACAACTTGATAGAAATGATATCCCTTTACAAATGATGAATCCCTATCCAAATCT 966
                                                                                   

consensus_10341#1      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      TTATGACAGTTTACAAACTTGGAAGGAAAAGGACAATGATGATGACGATGATGATAGTAA 1026
                                                                                   

consensus_10341#1      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      TGGAATTAATATAGATATGAATGAAAGGAATCGTCATGGAATTATAAAACACCATCCATG 1086
                                                                                   

consensus_10341#1      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      GAAGTCATTATCTCATTTAAATTCATTAGATAAAGATGATTCAATAGTATTTAGATGAAC 1146
                                                                                   

consensus_10341#1      ------------------------------------------------------------
consensus_10341#2      ------------------------------------------------------------
consensus_10341#0      AAATTCTTGAAAATAAATAAGAAACAAAGCAATATACTTGGAAAGAAATACAGAAAATAT 1206
                                                                                   

consensus_10341#1      -----
consensus_10341#2      -----
consensus_10341#0      ATATA 1211