cluster # 10378

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Schistosoma mansoni
cluster # 10378 cluster # 10378 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10378#0 length = 1291 sequences # 11
consensus_10378#1 length = 479 sequences # 1

consensus_10378#2 length = 477 sequences # 1
consensus_10378#3 length = 438 sequences # 1
consensus_10378#4 length = 272 sequences # 1

consensusID : consensus_10378#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1291
fasta sequence

                              [ATTTCGTGTGCGTATTTGTGTGTGTATTCGTGTGAAAGTTTATGTGGAACCACACTGGATAATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGTCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAACTCCAGAAGACTATTATCTCACCGAATTTCAGAGATATCAAATAATAGGTGCTGATTTTCCCCCATCAAATGACCGACAATAATCACCCTGACCATTCAGACAGTATACGAGAAACAACCAGGATTGATGAAGGAACCTTCCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCATCAACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACAAAATCAACGGCCAAGAACTTTAGGAGAAACTCTAGGTATCAATTTGGAAATTTCGTCGTCACCGTTTCATCAAAATCAAGCACTATCGTCTACTTTTCCATTCAATGAATTTAAA-TTTCCTGTTGATACTGAA-GGACAAGATTTGAACTCAAATATCTTCAGTTCTGAAGGCAGGGAGTTTCCGGACGACTGTGTAGATCGTGAATTTGTTATATTTCGTCGACCATCCAATGTATCCTCCAAAGAATCGTTTGCTGAAGATTTACCCGATGAATTCTTTGAACATACTGAAGAAGATTTACGTAGATTAATGCGTTCATATCGTGATGAATGGGCTGAAAGTCAACCTCTTCAAACATCAGCTATGCGTTCAGAAGCTCGTCATAAATCCTATTCTAAATATTGTAGAGCTATTATTCAATTTCACTGGGTTGATAATCTTGTCATTCAAGCATGTTTCCTTCCTAATGAAAAAGTGTCGGCATTATATAAATTTATTCATGATCTACAAAATTCTACTTATGACTTTAAACTATATACTACTCCGCCTAAATTGTTTCTGTCCGATAAAAATATCACATTAATTGAAGCTGATTTAGTACCTTTATCCAAAGTGTTTTATCATCCTACTGATATACCAGCTGAAAATGTTCTAAGATCAGATGTATTAGAAAAAGCCAATGAAGAAAATAGTATTAAAGCTCAGTCAATTGTTTCTTATTGGATGACAAATTTACCATCCCACAACTTAACTCAAGACAGTTCGTCTCAAATGGATATTGACGCTCAGAAAAACTTAAGACGCATTGATAGACCTGC]

[+] EMBL AI976554             [ATTTCGTGTGCGTATTTGTGTGTGTATTCGTGTGAAAGTTTATGTGGAACCACACTGGATAATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGCCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAACTCCAGAAGACTATTATCTCACCGAATTTCAGAGATATCAAATAATAGGTGCTGATTTTCCCCCATCAAATGACCGACAATAATCACCCTGACCATTCAGACAGTATACGAGAAACAACCAGGATTGATGAAGGAACCTTCCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCATCAACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACAAAATCAACGGCCAAGAACTTTAGGAGAAACTCTAGGTATCAATTTGGAAATTTCGTCGTCACCGTTTCATCAAAATCAAGCACTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AW017205             [                  TGTGTGTATTCGTGTGAAAGTTTATGTGGAACCACACTGGATAATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGTCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAACTCCAGAAGACTATTATCTCACCGAATTTCAGAGATATCAAATAATAGGTGCTGATTTTCCCCCATCAAATGACCGACAATAATCACCCTGACCATTCAGACAGTATACGAGAAACAACCAGGATTGATGAAGGAACCTTCCCAGGCTTTGTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BF936559             [                  TGTGTGTATTCGTGTGAAAGTTTATGTGGAACCACACTGGATAATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGTCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAACTCCAGAAGACTATTATCTCACCGAATTTCAGAGATATCAAATAATAGGTGCTGATTTTCCCCCATCAAATGACCGACAATAATCACCCTGACCATTCAGACAGTATACGAGAAACAACCAGGATTGATGAAGGAACCTTCCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCATCAACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACAAAATCAACGGCCAAGAACTTTAGGAGAAACTCTAGGTATCAATTTGGAAATTTCGTCGTCACCGTTTCATCAAAATCAAGCACTATCGTCTACTTTTCCATTCAATGAATTTAAATTTTCCTGTTGATACTGAA GGACAAGATTTGAACTCAAATATCTTCAGTTCTGAAGGCAGGGAGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AI976667             [                  TGTGTGTATTCGTGTGAAAGTTTATGTGGAACCACACTGGATAATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGTCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAACTCCAGAAGACTATTATCTCACCGAATTTCAGAGATATCAAATAATAGGTGCTGATTTTCCCCCATCAAATGACCGACAATAATCACCCTGACCATTCAGACAGTATACGAGAAACAACCAGGATTGATGAAGGAACCTTCCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCATCAACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACAAAATCAACGGCCAAGAACTTTAGGAGAAACTCTAGGTATCAATTTGGAAATTTCGTCGTCACCGTTTCATCAAAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BF936695             [                                 GAAAGTTTATGTGGAACCACACTGGATAATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGCCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAACTCCAGAAGACTATTATCTCACCGAATTTCAGAGATATCAAATAATAGGTGCTGATTTTCCCCCATCAAATGACCGACAATAATCACCCTGACCATTCAGACAGTATACGAGAAACAACCAGGATTGATGAAGGAACCTTCCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCATCAACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACAAAATCAACGGCCAAGAACTTTAGGAGAAACTCTAGGTATCAATTTGGAAATTTCGTCGTCACCGTTTCATCAAAATCAAGCACTATCGTCTACTTTTCCATTCAATGAATTTAAA TTTCCTGTTGATACTGAA GGACAAGATTTGAACTCAAATATCTTCAGTTCTGAA GCAGGGAGTTTCCGGACGACTGTGTAGATCGTGAATTTGTTATATTTCGTCGACCATTCAATGTATCCTCCAAAGAATCGTTTGCTGAAGATTTACCCGATGAATTCTTTGAACATACTGAAAGAGATTTACGTAGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD064023             [                                                                                                                                                                                                                                                                                                                                             GTATACGAGAAACAA CAGGA TGATGAAGGAACCTTCCCAGGC TTGTTTCACCATTCACTATATTCTCAGATCGTCCATCAACTTCTGCA TTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACAAAATCAACGGCCAAGAACTTTAGGAGAAACTCTAGGTATCAATTTGGAAATTTCGTCGTCACCGTTTCATCAAAATCAAGCACTATCGTCTACTTTTCCATTCAATGAATTTAAA TTTCCTGTTGATACTGAA GGACAAGATTTGAACTCAAATATCTTCAGTTCTGAAGGCAGGGAGTTTCCGGACGACTGTGTAGATCGTGAATTTGTTATATTTCGTCGACCATCCAATGTATCCTCCAAAGAATCGTTTGCTGAAGATTTACCCGATGAATTCTTTGAACATACTGAAGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD181734             [                                                                                                                                                                                                                                                                                                                                                           ACCAGGATTGATGAAGGAACCTTCCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCATCAACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACAAAATCAACGGCCAAGAACTTTAGGAGAAACTCTAGGTATCAATTTGGAAATTTCGTCGTCACCGTTTCATCAAAATCAAGCACTATCGTCTACTTTTCCATTCAATGAAATTTAA TTTCCTGTTGATACTGAAGGGAC AGATTTGAACTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AI975166             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TATATTTCGTCGACCATCCAATGTATCCTCCAAAGAATCGTTTGCTGAAGATTTACCCGATGAATTCTTTGAACATACTGAAGAAGATATACGTAGATTAATGCGTTCATATCGTGATGAATGGGCTGAAAGTCAACCTCTTCAAACATCAGCTATGCGTTCAGAAGCTCGTCATAAATCCTATTCTAAATATTGTAGAGCTATTATTCAATTTCACTGGGTTGATAATCTTGTCATTCAAGCATGTTTCCTTCCTAATGAAAAAGTGTCGGCATTATATAAATTTATTCATGATCTACAAAATTCTACTTATGACTTTAAACTATATACTACTCCGCCTAAATTGTTTCTGTCCGATAAAAATATCACATTAATTGAAGCTGATTTAGTACCTTTATCCAAAGTGTTTTATCATCCTACTGATATACCAACT                                                                                                                                                                                ]
[+] EMBL CD114707             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATAATCTTGTCATTCAAGCATGTTTCCTTCCTAATGAAAAAGTGTCGGCATTATATAAATTTATTCATGATCTACAAAATTCTACTTATGACTTTAAACTATATACTACTCCGCCTAAATTGTTTCTGTCCGATAAAAATATCACATTAATTGAAGCTGATTTAGTACCTTTATCCAAAGTGTTTTATCATCCTACTGATATACCAGCTGAAAATGTTCTAAGATCAGATGTATTAGAAAAAGCCAATGAAGAAAATAGTATTAAAGCTCAGTCAATTGTTTCTTATTGGATGACAAATTTACCATCCCACAACTTAACTCAAGACAGTTCGTCTCAAATGGATATTGACGCTCAGAAAAACTTAAGACGCATTGATAGACCTG ]
[+] EMBL CD114838             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATAATCTTGTCATTCAAGCATGTTTCCTTCCTAATGAAAAAGTGTCGGCATTATATAAATTTATTCATGATCTACAAAATTCTACTTATGACTTTAAACTATATACTACTCCGCCTAAATTATTTCTGTCCGATAAAAATATCACATTAATTGAAGCTGATTTAGTACCTTTATCCAAAGTGTTTTATCATCCTACTGATATACCAGCTGAAAATGTTCTAAGATCAGATGTATTAGAAAAAGCCAATGAAGAAAATAGTATTAAAGCTCAGTCAATTGTTTCTTATTGGATGACAAATTTACCATCCCACAACTTAACTCAAGACAGTTCGTCTCAAATGGATATTGACGCTCAGAAAAACTTAAGACGCATTGATAGACCTG ]
[-] EMBL CD114642             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATAATCTTGTCATTCAAGCATGTTTCCTTCCTAATGAAAAAGTGTCGGCATTATATAAATTTATTCATGATCTACAAAATTCTACTTATGACTTTAAACTATATACTACTCCGCCTAAATTGTTTCTGTCCGATAAAAATATCACATTAATTGAAGCTGATTTAGTACCTTTATCCAAAGTGTTTTATCATCCTACTGATATACCAGCTGAAAATGTTCTAAGATCAGATGTATTAGAAAAAGCCAATGAAGAAAATAGTATTAAAGCTCAGTCAATTGTTTCTTATTGGATGACAAATTTACCATCCCACAACTTAACTCAAGACAGTTCGTCTCAAATGGATATTGACGCTCAGAAAAACTTAAGACGCATTGATAGACCTGC]




>consensus_10378#0
ATTTCGTGTGCGTATTTGTGTGTGTATTCGTGTGAAAGTTTATGTGGAACCACACTGGAT
AATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCA
ACGACAAATCCTGTCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGA
TAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAACTCCAGAAGA
CTATTATCTCACCGAATTTCAGAGATATCAAATAATAGGTGCTGATTTTCCCCCATCAAA
TGACCGACAATAATCACCCTGACCATTCAGACAGTATACGAGAAACAACCAGGATTGATG
AAGGAACCTTCCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCATCAACTT
CTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACAAAATCAAC
GGCCAAGAACTTTAGGAGAAACTCTAGGTATCAATTTGGAAATTTCGTCGTCACCGTTTC
ATCAAAATCAAGCACTATCGTCTACTTTTCCATTCAATGAATTTAAATTTCCTGTTGATA
CTGAAGGACAAGATTTGAACTCAAATATCTTCAGTTCTGAAGGCAGGGAGTTTCCGGACG
ACTGTGTAGATCGTGAATTTGTTATATTTCGTCGACCATCCAATGTATCCTCCAAAGAAT
CGTTTGCTGAAGATTTACCCGATGAATTCTTTGAACATACTGAAGAAGATTTACGTAGAT
TAATGCGTTCATATCGTGATGAATGGGCTGAAAGTCAACCTCTTCAAACATCAGCTATGC
GTTCAGAAGCTCGTCATAAATCCTATTCTAAATATTGTAGAGCTATTATTCAATTTCACT
GGGTTGATAATCTTGTCATTCAAGCATGTTTCCTTCCTAATGAAAAAGTGTCGGCATTAT
ATAAATTTATTCATGATCTACAAAATTCTACTTATGACTTTAAACTATATACTACTCCGC
CTAAATTGTTTCTGTCCGATAAAAATATCACATTAATTGAAGCTGATTTAGTACCTTTAT
CCAAAGTGTTTTATCATCCTACTGATATACCAGCTGAAAATGTTCTAAGATCAGATGTAT
TAGAAAAAGCCAATGAAGAAAATAGTATTAAAGCTCAGTCAATTGTTTCTTATTGGATGA
CAAATTTACCATCCCACAACTTAACTCAAGACAGTTCGTCTCAAATGGATATTGACGCTC
AGAAAAACTTAAGACGCATTGATAGACCTGC

consensusID : consensus_10378#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 479
fasta sequence

                              [TATGTGGAACCACACTGGATAATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGCCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAGGTATTCTAGAACTCCAGAAGACTATTATCTCACCGAATTTCAGAGATATCAAATAATAGGTGCTGATTTTCCCCCATCAAATGACCGACAATAATCACCCTGACCATTCAGACAGTATACGAGAAACAAGTGGTGTATCGTCTGTGCGTGCTGATTGGATGTTTGCCAGGATTGATGAAGGAACCTTCCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCATCAACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACA]

[+] EMBL AI976302             [TATGTGGAACCACACTGGATAATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGCCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAGGTATTCTAGAACTCCAGAAGACTATTATCTCACCGAATTTCAGAGATATCAAATAATAGGTGCTGATTTTCCCCCATCAAATGACCGACAATAATCACCCTGACCATTCAGACAGTATACGAGAAACAAGTGGTGTATCGTCTGTGCGTGCTGATTGGATGTTTGCCAGGATTGATGAAGGAACCTTCCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCATCAACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACA]




>consensus_10378#1
TATGTGGAACCACACTGGATAATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAA
TTACTGCACCACATACTTCAACGACAAATCCTGCCCATTGTTGCTTGTATCCTGTATCTA
CATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGG
TGACGCTAAGGTATTCTAGAACTCCAGAAGACTATTATCTCACCGAATTTCAGAGATATC
AAATAATAGGTGCTGATTTTCCCCCATCAAATGACCGACAATAATCACCCTGACCATTCA
GACAGTATACGAGAAACAAGTGGTGTATCGTCTGTGCGTGCTGATTGGATGTTTGCCAGG
ATTGATGAAGGAACCTTCCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCA
TCAACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACA

consensusID : consensus_10378#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 477
fasta sequence

                              [GTGAAAGTTTATGTGGAACCACACTGGATAATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGCCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAACTCCAGAAGACTATTATCTCACCGAATTTCAGAGATATCAAATAATAGGTGCTGATTTTCCCCCATCAAATGACCGACAATAATCACCCTGACCATTCAGACAGTATACGAGAAACAAGTGGTGTATCGTCTGTGCGTGCTGATTGGATGTTTGCCAGGATTGATGAAGGAACCTTTCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCATCAACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACA]

[+] EMBL AI976838             [GTGAAAGTTTATGTGGAACCACACTGGATAATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGCCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAACTCCAGAAGACTATTATCTCACCGAATTTCAGAGATATCAAATAATAGGTGCTGATTTTCCCCCATCAAATGACCGACAATAATCACCCTGACCATTCAGACAGTATACGAGAAACAAGTGGTGTATCGTCTGTGCGTGCTGATTGGATGTTTGCCAGGATTGATGAAGGAACCTTTCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCATCAACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACA]




>consensus_10378#2
GTGAAAGTTTATGTGGAACCACACTGGATAATTTGGATATCAGTCACAGTTCGGCATTGT
TACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGCCCATTGTTGCTTGTATC
CTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCG
CTAAACTGGTGACGCTAAACTCCAGAAGACTATTATCTCACCGAATTTCAGAGATATCAA
ATAATAGGTGCTGATTTTCCCCCATCAAATGACCGACAATAATCACCCTGACCATTCAGA
CAGTATACGAGAAACAAGTGGTGTATCGTCTGTGCGTGCTGATTGGATGTTTGCCAGGAT
TGATGAAGGAACCTTTCCAGGCTTTGTTTCACCATTCACTATATTCTCAGATCGTCCATC
AACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCTCCCATAGAACA

consensusID : consensus_10378#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 438
fasta sequence

                              [CGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGCCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAACTCCAGAAGACTATTATCTCACCGGATTTTCAGAGATATCAAATATAGGGGCTGATTTTCCCCATCAAATGACCGGCAATTATCACCCTGGCCATTCAGACAGTATACGAGGAACAACCAGGATTTGTGGAGGGACCTTCCAGGCTTTTTTTCACCATTCACATATTTCAGAGTCTGCATCAACTTTGGATTTGTAATATTGGGCAAATTGACCACAATCTCCCATAGACAAATCTACGGGCAGACTTTAGAGAATCTAGGATCAATTTGGAATTCGCGCACGGTCTCAA]

[+] EMBL AI390083             [CGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGCCCATTGTTGCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAACTCCAGAAGACTATTATCTCACCGGATTTTCAGAGATATCAAATATAGGGGCTGATTTTCCCCATCAAATGACCGGCAATTATCACCCTGGCCATTCAGACAGTATACGAGGAACAACCAGGATTTGTGGAGGGACCTTCCAGGCTTTTTTTCACCATTCACATATTTCAGAGTCTGCATCAACTTTGGATTTGTAATATTGGGCAAATTGACCACAATCTCCCATAGACAAATCTACGGGCAGACTTTAGAGAATCTAGGATCAATTTGGAATTCGCGCACGGTCTCAA]




>consensus_10378#3
CGGCATTGTTACAACTAATTACTGCACCACATACTTCAACGACAAATCCTGCCCATTGTT
GCTTGTATCCTGTATCTACATTATGCAAGAACATTTGATAAAGATTCGAAAACATTAAAT
CAAACAGCGCTAAACTGGTGACGCTAAACTCCAGAAGACTATTATCTCACCGGATTTTCA
GAGATATCAAATATAGGGGCTGATTTTCCCCATCAAATGACCGGCAATTATCACCCTGGC
CATTCAGACAGTATACGAGGAACAACCAGGATTTGTGGAGGGACCTTCCAGGCTTTTTTT
CACCATTCACATATTTCAGAGTCTGCATCAACTTTGGATTTGTAATATTGGGCAAATTGA
CCACAATCTCCCATAGACAAATCTACGGGCAGACTTTAGAGAATCTAGGATCAATTTGGA
ATTCGCGCACGGTCTCAA

consensusID : consensus_10378#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 272
fasta sequence

                              [TCGGCACGAGGCGACTGTGTAGATCGTGAATTTGTTATATTTCGTCGACCATCCAATGTATCCTCCAAAGAATCGTTTGCTGAAGATTTACCCGATGAATTCTTTGAACATACTGAAGAAGATATACGTAGATTAATGCGTTCATATCGTGATGAATGGGCTGAAAGTCAACCTCTTCAAACATCAGCTATGCGTTCAGAAGCTCGTCATAAATCCTATTCTAAATATTGTAGAGCTATTATTCAATTTCACTGGGTTGATAATCTTGTCAT]

[+] EMBL CD078044             [TCGGCACGAGGCGACTGTGTAGATCGTGAATTTGTTATATTTCGTCGACCATCCAATGTATCCTCCAAAGAATCGTTTGCTGAAGATTTACCCGATGAATTCTTTGAACATACTGAAGAAGATATACGTAGATTAATGCGTTCATATCGTGATGAATGGGCTGAAAGTCAACCTCTTCAAACATCAGCTATGCGTTCAGAAGCTCGTCATAAATCCTATTCTAAATATTGTAGAGCTATTATTCAATTTCACTGGGTTGATAATCTTGTCAT]




>consensus_10378#4
TCGGCACGAGGCGACTGTGTAGATCGTGAATTTGTTATATTTCGTCGACCATCCAATGTA
TCCTCCAAAGAATCGTTTGCTGAAGATTTACCCGATGAATTCTTTGAACATACTGAAGAA
GATATACGTAGATTAATGCGTTCATATCGTGATGAATGGGCTGAAAGTCAACCTCTTCAA
ACATCAGCTATGCGTTCAGAAGCTCGTCATAAATCCTATTCTAAATATTGTAGAGCTATT
ATTCAATTTCACTGGGTTGATAATCTTGTCAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10378#1      ----------------------------------------TATGTGGAACCACACTGGAT 20
consensus_10378#2      -------------------------------GTGAAAGTTTATGTGGAACCACACTGGAT 29
consensus_10378#3      ------------------------------------------------------------
consensus_10378#0      ATTTCGTGTGCGTATTTGTGTGTGTATTCGTGTGAAAGTTTATGTGGAACCACACTGGAT 60
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      AATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCA 80
consensus_10378#2      AATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCA 89
consensus_10378#3      ----------------------CGGCATTGTTACAACTAATTACTGCACCACATACTTCA 38
consensus_10378#0      AATTTGGATATCAGTCACAGTTCGGCATTGTTACAACTAATTACTGCACCACATACTTCA 120
consensus_10378#4      ---------------------TCGGCAC-GAGGCGACTGTGTA---GATCGTGAATTT-- 33
                                             *****  *   * ***   **    * *    * **  

consensus_10378#1      ACGACAAATCCTGCCCATTGTTGCTTGTATCCTGTAT----CTACATTATGCAAGAACAT 136
consensus_10378#2      ACGACAAATCCTGCCCATTGTTGCTTGTATCCTGTAT----CTACATTATGCAAGAACAT 145
consensus_10378#3      ACGACAAATCCTGCCCATTGTTGCTTGTATCCTGTAT----CTACATTATGCAAGAACAT 94
consensus_10378#0      ACGACAAATCCTGTCCATTGTTGCTTGTATCCTGTAT----CTACATTATGCAAGAACAT 176
consensus_10378#4      --GTTATATTTCGTCGACCATCCAATGTATCCTCCAAAGAATCGTTTGCTGAAGATTTAC 91
                         *  * **   * * *   *    ********  *          *  ** *     * 

consensus_10378#1      TTGATAAAGA-TTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAAGGTATT 195
consensus_10378#2      TTGATAAAGA-TTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAA------ 198
consensus_10378#3      TTGATAAAGA-TTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAA------ 147
consensus_10378#0      TTGATAAAGA-TTCGAAAACATTAAATCAAACAGCGCTAAACTGGTGACGCTAA------ 229
consensus_10378#4      CCGATGAATTCTTTGAACATACTGAAGAAGATATACGTAGATTAATG-CGTTCA------ 144
                         *** **   ** *** * * * **  * * *    ** * *  ** ** * *      

consensus_10378#1      CTAGAACTCCAGAAGACTATTATCTCACCGAATTT-CAGAGATATCAAATAATAGGTGCT 254
consensus_10378#2      -----ACTCCAGAAGACTATTATCTCACCGAATTT-CAGAGATATCAAATAATAGGTGCT 252
consensus_10378#3      -----ACTCCAGAAGACTATTATCTCACCGGATTTTCAGAGATATCAAATA-TAGGGGCT 201
consensus_10378#0      -----ACTCCAGAAGACTATTATCTCACCGAATTT-CAGAGATATCAAATAATAGGTGCT 283
consensus_10378#4      -----TATCGTGATGAATGGGCTGAAAGTCAACCTCTTCAAACATCAGCTA-TGCGTTCA 198
                              **  ** ** *    *   *    *  *    * * ****  ** *  *  * 

consensus_10378#1      GATTTTCCCCCATCAAATGACCGACAATAATCACCCT-GACCATTCAGACAGTATACGAG 313
consensus_10378#2      GATTTTCCCCCATCAAATGACCGACAATAATCACCCT-GACCATTCAGACAGTATACGAG 311
consensus_10378#3      GATTTTCCCC-ATCAAATGACCGGCAATTATCACCCT-GGCCATTCAGACAGTATACGAG 259
consensus_10378#0      GATTTTCCCCCATCAAATGACCGACAATAATCACCCT-GACCATTCAGACAGTATACGAG 342
consensus_10378#4      GAAGCTC----GTCATAAATCCTATTCTAAATATTGTAGAGCTATTATTCAATTTCACTG 254
                       **   **     *** *   **     * *  *   * *  *  * *  ** * *    *

consensus_10378#1      AAACAAGTGGTGTATCGTCTGTGCGTGCTGATTGGATGTTTGCCAGGATTGA-TGAA--- 369
consensus_10378#2      AAACAAGTGGTGTATCGTCTGTGCGTGCTGATTGGATGTTTGCCAGGATTGA-TGAA--- 367
consensus_10378#3      GAACAACCAGGAT-TTGTG-GAGGGACCTTCCAGGCTTTTTTTCACCATTCA-CATATT- 315
consensus_10378#0      AAACAACCAGGAT-TGATGAAGGAACCTTCCCAGGCTTTGTTTCACCATTCACTATATTC 401
consensus_10378#4      GGTTGATAATCTTGTCAT------------------------------------------ 272
                            *      * *  *                                          

consensus_10378#1      --GGAACCTTCCCAGGCTTTG---TTT--CACCATTCACTATATT---CTCAGAT---CG 416
consensus_10378#2      --GGAACCTTTCCAGGCTTTG---TTT--CACCATTCACTATATT---CTCAGAT---CG 414
consensus_10378#3      TCAGAGTCTGCATCAACTTTGGATTTG--TAATATTGGGCAAATTGA-CCACAAT---CT 369
consensus_10378#0      TCAGATCGTCCATCAACTTCTGCATTTGCTAATATTGGACAAATTGAACCTACATATCCT 461
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      TCCATC-AACTTCTGCATTTGCTAA----TATTGGACAAATT----GAACCTACAT---A 464
consensus_10378#2      TCCATC-AACTTCTGCATTTGCTAA----TATTGGACAAATT----GAACCTACAT---A 462
consensus_10378#3      CCCATA-GACAAATCTACGGGCAGA----CTTTAGAGAATCTA---GGATCAATTTGGAA 421
consensus_10378#0      CCCATAGAACAAAATCAACGGCCAAGAACTTTAGGAGAAACTCTAGGTATCAATTTGGAA 521
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      TCCTCC----CATAGAACA----------------------------------------- 479
consensus_10378#2      TCCTCC----CATAGAACA----------------------------------------- 477
consensus_10378#3      TTCGCG----CACGGTCTCAA--------------------------------------- 438
consensus_10378#0      ATTTCGTCGTCACCGTTTCATCAAAATCAAGCACTATCGTCTACTTTTCCATTCAATGAA 581
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      ------------------------------------------------------------
consensus_10378#2      ------------------------------------------------------------
consensus_10378#3      ------------------------------------------------------------
consensus_10378#0      TTTAAATTTCCTGTTGATACTGAAGGACAAGATTTGAACTCAAATATCTTCAGTTCTGAA 641
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      ------------------------------------------------------------
consensus_10378#2      ------------------------------------------------------------
consensus_10378#3      ------------------------------------------------------------
consensus_10378#0      GGCAGGGAGTTTCCGGACGACTGTGTAGATCGTGAATTTGTTATATTTCGTCGACCATCC 701
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      ------------------------------------------------------------
consensus_10378#2      ------------------------------------------------------------
consensus_10378#3      ------------------------------------------------------------
consensus_10378#0      AATGTATCCTCCAAAGAATCGTTTGCTGAAGATTTACCCGATGAATTCTTTGAACATACT 761
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      ------------------------------------------------------------
consensus_10378#2      ------------------------------------------------------------
consensus_10378#3      ------------------------------------------------------------
consensus_10378#0      GAAGAAGATTTACGTAGATTAATGCGTTCATATCGTGATGAATGGGCTGAAAGTCAACCT 821
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      ------------------------------------------------------------
consensus_10378#2      ------------------------------------------------------------
consensus_10378#3      ------------------------------------------------------------
consensus_10378#0      CTTCAAACATCAGCTATGCGTTCAGAAGCTCGTCATAAATCCTATTCTAAATATTGTAGA 881
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      ------------------------------------------------------------
consensus_10378#2      ------------------------------------------------------------
consensus_10378#3      ------------------------------------------------------------
consensus_10378#0      GCTATTATTCAATTTCACTGGGTTGATAATCTTGTCATTCAAGCATGTTTCCTTCCTAAT 941
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      ------------------------------------------------------------
consensus_10378#2      ------------------------------------------------------------
consensus_10378#3      ------------------------------------------------------------
consensus_10378#0      GAAAAAGTGTCGGCATTATATAAATTTATTCATGATCTACAAAATTCTACTTATGACTTT 1001
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      ------------------------------------------------------------
consensus_10378#2      ------------------------------------------------------------
consensus_10378#3      ------------------------------------------------------------
consensus_10378#0      AAACTATATACTACTCCGCCTAAATTGTTTCTGTCCGATAAAAATATCACATTAATTGAA 1061
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      ------------------------------------------------------------
consensus_10378#2      ------------------------------------------------------------
consensus_10378#3      ------------------------------------------------------------
consensus_10378#0      GCTGATTTAGTACCTTTATCCAAAGTGTTTTATCATCCTACTGATATACCAGCTGAAAAT 1121
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      ------------------------------------------------------------
consensus_10378#2      ------------------------------------------------------------
consensus_10378#3      ------------------------------------------------------------
consensus_10378#0      GTTCTAAGATCAGATGTATTAGAAAAAGCCAATGAAGAAAATAGTATTAAAGCTCAGTCA 1181
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      ------------------------------------------------------------
consensus_10378#2      ------------------------------------------------------------
consensus_10378#3      ------------------------------------------------------------
consensus_10378#0      ATTGTTTCTTATTGGATGACAAATTTACCATCCCACAACTTAACTCAAGACAGTTCGTCT 1241
consensus_10378#4      ------------------------------------------------------------
                                                                                   

consensus_10378#1      --------------------------------------------------
consensus_10378#2      --------------------------------------------------
consensus_10378#3      --------------------------------------------------
consensus_10378#0      CAAATGGATATTGACGCTCAGAAAAACTTAAGACGCATTGATAGACCTGC 1291
consensus_10378#4      --------------------------------------------------