cluster # 10393

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Schistosoma mansoni
cluster # 10393 cluster # 10393 Sequences # 16 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10393#0 length = 1297 sequences # 6
consensus_10393#1 length = 933 sequences # 4

consensus_10393#2 length = 584 sequences # 3
consensus_10393#3 length = 488 sequences # 2
consensus_10393#4 length = 437 sequences # 1

consensusID : consensus_10393#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1297
fasta sequence

                              [CGGCACGAGGACAAGAAAAGAATCTTAATGTTTGCTCTTCTCCTCCTTCAATACATCCTTCATGTATTCATCTATCGTCGATAAAACATTGTCGGTGATGTTCAACAATGACAACTACATCCGTTGTTTTAATGATCTATAAACTATTCAACGCAGTAACAGTACCATTGATGCTCTTTGTCTGTGTGCGTATTTTCTTCGCACATTCTTCCATAAAATTATGAATGGATTCACACATATACACATACATCCACTCTCTTCATTTTGTGTTGTTCCTCTTTCTCGATTAACATTTCTGTCGATAATGAGAGTGTTTGTGTGTTGATTTCGTTTCATTTGAGTCTTCTTAATTTTTTTTCCCACGTTTCTGTTTGCCTTTTATTCAGTGACGATTCCTTGTTCATGGCTTATCATCTAGCATTTACTATTACTGATCGACATGATGATGATAAGCTCGTGTTGCTCTTGTTTATATCTGCTCCCTTTATTTTTAACAGTTTTTTTCTTCTTATCTCGACTGATTGGTTTTGTCCTGTGTGTTTATAGATGTTTCCAAACTTCGTGCATATTACAGGATAAATCGTTTCTATCTACACTAACCAGTCAAACTTGTATGTTGTTGATGACGGAGCTTATCGATGAAATCGGTGATGTGTCTGATCTTTTTTTTATAAGAAAAAAATGTTAAACATAACACAAACTATCCAATTCATCTTCCCTACGTATCTACCTCTGTCAGCATTATTATTATTATTATGGTTATTACCATCGTGTTAATGATGATCAACACGAACATCTTTTGTTGGTGTCGTTTGTCTCTCTCTCTCTCTCTACCCAACTCCTCCTCTTCTTTCTCTGTAAATCAACACTTATTCGGTTATTCCAACTACGTATGTATATGTGTATAATTGTTTGTTTTATATACTGTTCATTGTAATTTCTTCATACCATTTTCTAGTTAATGGTAATTGTTACATTCATAATTGATCAAACGTATAACAATCATTGAATCTATTTCATTATTAAAATGATAAGTTAACTTTTAATCGTTTTACACTTACATGTTGGGTCATAGAAACAATAAGTTTGTCCCTCCCCACACATATATATATATACACAATTGTTTATTTTATAGCTTTATTATTATTATTACTATTATGCTTTTACAGTAAGTATAAACTAATCATCCTGTTGTTTTTTTTTCATCGTAGAGAGAATATCATTTTACTTGAATAATAATGTGTTGTGTTCTTTTTCTTGATTACCATCATTATTGTATCTTCCAAATAATAAAATA]

[+] EMBL CD081332             [CGGCACGAGGACAAGAAAAGAATCTTAATGTTTGCTCTTCTCCTCCTTCAATACATCCTTCATGTATTCATCTATCGTCGATAAAACATTGTCGGTGATGTTCAACAATGACAACTACATCCGTTGTTTTAATGATCTATAAACTATTCAACGCAGTAACAGTACCATTGATGCTCTTTGTCTGTGTGCGTATTTTCTTCGCACATTCTTCCATAAAATTATGAATGGATTCACACATATACACATACATCCACTCTCTTCATTTTGTGTTGTTCCTCTTTCTCGATTAACATTTCTGTCGATAATGAGAGTGTTTGTGTGTTGATTTCGTTTCATTTGAGTCTTCTTAATTTTTTTTCCCACGTTTCTGTTTGCCTTTTATTCAGTGACGATTCCTTGTTCAT  ATTATCATCTAGCATTTACTATTACTGATCGACATGATGATGATAAGCTCGTGTTGCTCTTGTTTATATCTGCTCCCTTTATTTTTAACAGTTTTTTTCTTCTTATCTCGACTGATTGGTTTTGTCCTGTGTGTTTATAGATGTTTCCAAACTTCGTGCATATTACAGGATAAATCGTTTCTATCTACACTAACCAGTCAAACTTGTATGTTGTTGATGACGGAGCTTATCGATGAAATCGGTGATGTGTCTGATCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD167125             [                                                                                                                                                                                                                                                                                                            GATAATGAGAGTGTTTGTGTGTTGATTTCCTTTCATTTGAGTCTTCTTAATTTTTTTTCCCACGTGTCTGTTTGCCTTTTATTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AW017167             [                                                                                                                                                                                                                                                                                                                                                                                                               TTCATGGCTTATCATCTAGCATTTACTATTACTGATCGACATGATGATGATAAGCTCGTGTTGCTCTTGTTTATATCTGCTCCCTTTATTTTTAACAGTTTTTTTCTTCTTATCTCGACTGATTGGTTTTGTCCTGTGTGTTTATAGATGTTTCCAAACTTCGTGCATATTACAGGATAAATCGTTTCTATCTACACTAACCAGTCAAACTTGTATGTTGTTGATGACGGAGCTTATCGATGAAATCGGTGATGTGTCTGATCTTTTTTTTATAAGAAAAAAATGTTAAACATAACACAAACTATCCAATTCATCTTCCCTACGTATCTACCTCTGTCAGCATTATTATTATTATTATGGTTATTACCATCGTGTTAATGATGATCAACACGAACATCTTTTGTTGGTGTCGTTTGTCTCTCTCTCTCTCTCTACCCAACTCCTCCTCTTCTTTCTCTGTAAATCAACACTTATTCGGTTATTCCAACTACGTATGTATATGTGTATAATTGCTTGTTATATATACTGTTCATTGTAATTTCTTCATACCATTTTCTAGTTAATGGTAATTGTTACATTCATAATTGATCAAACGTATAACAATCATTGAATCTATTTCATT                                                                                                                                                                                                                                                                                    ]
[+] EMBL AI977584             [                                                                                                                                                                                                                                                                                                                                                                                                               TTCATGGCTTATCATCTAGCATTTACTATTACTGATCGACATGATGATGATAAGCTCGTGTTGCTCTTGTTTATATCTGCTCCCTTTATTTTTAACAGTTTTTTTCTTCTTATCTCGACTGATTGGTTTTGTCCTGTGTGTTTATAGATGTTTCCAAACTTCGTGCATATTACAGGATAAATCGTTTCTATCTACACTAACCAGTCAAACTTGTATGTTGTTGATGACGGAGCTTATCGATGAAATCGGTGATGTGTCTGATCTTTTTTTTATAAGAAAAAAATGTTAAACATAACACAAACTATCCAATTCATCTTCCCTACGTATCTACCTCTGTCAGCATTATTATTATTATTATGGTTATTACCATCGTGTTAATGATGATCAACACGAACATCTTTTGTTGGTGTCGTTTGTCTCTCTCTCTCTCTCTACCCAACTCCTCCTCTTCTTTCTCTGTAAATCAACACTTATTCGGTTATTCCAACTACGTATGTATATGTGTATAATTGTTTGGTTTATATACTGTTCATTGTAATTTCTTCATACCATTTTCTAGTTAATGGTAAATGGTACATTCAT                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD075165             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CATAACACAAACTATCCAATTCATCTTCCCTACGTATCTACCTCTGTCAGCATTATTATTATTATTATGGTTATTACCATCGTGTTAATGATGATCAACACGAACATCTTTTGTTGGTGTCGTTTG  TCTCTCTCTCTCTCTACCCAACTCCTCCTCTTCTTTCTCTGTAAATCAACACTTATTCGGTTATTCCAACTAGGTATGTATATGTGTATAATTGTTTGTTTTATATACTGTTCATTGTAATTTCTTCATACCATTTTCTAGTTAATGGTAATTGTTACATTCATAATTGATCAAACGTATAACAATCATTGAATCTATTTCATTATTAAAATGATAAGTTAACTTTTAATCGTTTTACACTTACATGTTGGGTCATAGAAACAATAAGTTTGTCCCTCCCCACACATATATATATATACACAATTGTTTATTTTATAGCTTTATTATTATTATTACTATTATGCTTTTACAGTAAGTATAAACTAATCATCCTGTTGTTTTTTTTTCATCGTAGAGAGAATATCATTTTACTTGAATAATAATGTGTTGTGTTCTTTTTCTTGATTACCATCATTATTGTATCTTCCAAATAATAAAATA]
[+] EMBL BE463398             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AATCTATTTCATTATTGAAATGATAAGTTAACTTTTAATCGTTTTACACTTACATGTTGGGTCATAGAAACAATAAGTTTGTCCCTCCCCACACATATATATATATACACAATTGTTTATTTTATAGCTTTATTATTATTATTACTATTATGCTTTTACAGTAAGTATAAACTAATCATCCTGTTGTTTTTTTTTCATCGTAGAGAGAATCTCATTTTACTTGAATAATAATGTGTTGTGTTCTTTTTCTTGATTACCATCATTATTGTGTCTTCAAAA          ]




>consensus_10393#0
CGGCACGAGGACAAGAAAAGAATCTTAATGTTTGCTCTTCTCCTCCTTCAATACATCCTT
CATGTATTCATCTATCGTCGATAAAACATTGTCGGTGATGTTCAACAATGACAACTACAT
CCGTTGTTTTAATGATCTATAAACTATTCAACGCAGTAACAGTACCATTGATGCTCTTTG
TCTGTGTGCGTATTTTCTTCGCACATTCTTCCATAAAATTATGAATGGATTCACACATAT
ACACATACATCCACTCTCTTCATTTTGTGTTGTTCCTCTTTCTCGATTAACATTTCTGTC
GATAATGAGAGTGTTTGTGTGTTGATTTCGTTTCATTTGAGTCTTCTTAATTTTTTTTCC
CACGTTTCTGTTTGCCTTTTATTCAGTGACGATTCCTTGTTCATGGCTTATCATCTAGCA
TTTACTATTACTGATCGACATGATGATGATAAGCTCGTGTTGCTCTTGTTTATATCTGCT
CCCTTTATTTTTAACAGTTTTTTTCTTCTTATCTCGACTGATTGGTTTTGTCCTGTGTGT
TTATAGATGTTTCCAAACTTCGTGCATATTACAGGATAAATCGTTTCTATCTACACTAAC
CAGTCAAACTTGTATGTTGTTGATGACGGAGCTTATCGATGAAATCGGTGATGTGTCTGA
TCTTTTTTTTATAAGAAAAAAATGTTAAACATAACACAAACTATCCAATTCATCTTCCCT
ACGTATCTACCTCTGTCAGCATTATTATTATTATTATGGTTATTACCATCGTGTTAATGA
TGATCAACACGAACATCTTTTGTTGGTGTCGTTTGTCTCTCTCTCTCTCTCTACCCAACT
CCTCCTCTTCTTTCTCTGTAAATCAACACTTATTCGGTTATTCCAACTACGTATGTATAT
GTGTATAATTGTTTGTTTTATATACTGTTCATTGTAATTTCTTCATACCATTTTCTAGTT
AATGGTAATTGTTACATTCATAATTGATCAAACGTATAACAATCATTGAATCTATTTCAT
TATTAAAATGATAAGTTAACTTTTAATCGTTTTACACTTACATGTTGGGTCATAGAAACA
ATAAGTTTGTCCCTCCCCACACATATATATATATACACAATTGTTTATTTTATAGCTTTA
TTATTATTATTACTATTATGCTTTTACAGTAAGTATAAACTAATCATCCTGTTGTTTTTT
TTTCATCGTAGAGAGAATATCATTTTACTTGAATAATAATGTGTTGTGTTCTTTTTCTTG
ATTACCATCATTATTGTATCTTCCAAATAATAAAATA

consensusID : consensus_10393#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 933
fasta sequence

                              [TTTAGTATCTTTTCAGATTTCTTCAATTAATATGTCATTTTTTTATATTCTCAGTGATTTTTCGTTACTAAACTAATTATACTCTTTATGTCTCCGTATTATCCTTCTGCATTTCAATTTTTTCCGGTGTAAGTTTTTAACAATCCATGTTTGCCGGATGTACTGTTAAATTGATTTATCCATTTGTATGCGCATCGATTGTTTACATCTATGCAAAAGACATTTCTAATTGTTTTCAAATCGTTTACTTTTTCTTTCCAAATTATTATCTACCGAATTTTCTTTGAAATTAGGTTGAAAGAGCACGACTGGCGAAAGCACGTGCAGAAAAGGCTGAGGCTTTAGAAGCTAAATCAGTTTTAGAGGCTCGGTGTGCTCAACTTGAAGAGGTACTAATACATCAGCAAAAATGCCAAAACCCTTACACCTCTGATAACCATAATCGTTTGTTCGATACCTATGCAGTTAATTCGCCCTCCACTCAAGCTTCTCAATGTATATCCAATCCATACAACTGTAAAGTTGCTTTCAGTCCCATGAAGAAAGAAAATCAAAAAGACGTTAAAATAGATAGTATACTATGTTCATATATAATTCTGAAATGTAATAGGTAGGCGATGAATGTAAACATGGGGGAATTAAATAATGATGAATAACTGTTGATAATTACTAATCCACAATTAATGCTATTGCTAACGTCACATCACTTATAAACGTCTACTCAAAAAACGATAAGCAGCGACTAGGCCGACAGCTCCAACAGCTATTGTTGCTACACTAGTCAAAGCGTTTCGAAGTGAACGTAACGTATCATCATCGGTGAAACCACCAGTGACTAAACCAATTAAACTATTATTTCCAATTGTTGATGAGGTTACTGTTGATCGGTCAGTTTCATCACGTTGTGATTCAAAATTAATAAGTCCCTCCCAA]

[+] EMBL CD114538             [TTTAGTATCTTTTCAGATTTCTTCAATTAATATGTCATTTTTTTATATTCTCAGTGATTTTTCGTTACTAAACTAATTATACTCTTTATGTCTCCGTATTATCCTTCTGCATTTCAATTTTTTCCGGTGTAAGTTTTTAACAATCCATGTTTGCCGGATGTACTGTTAAATTGATTTATCCATTTGTATGCGCATCGATTGTTTACATCTATGCAAAAGACATTTCTAATTGTTTTCAAATCGTTTACTTTTTCTTTCCAAATTATTATCTACCGAATTTTCTTTGAAATTAGGTTGAAAGAGCACGACTGGCGAAAGCACGTGCAGAAAAGGCTGAGGCTTTAGAAGCTAAATCAGTTTTAGAGGCTCGGTGTGCTCAACTTGAAGAGGTACTAATACATCAGCAAAAATGCCAAAACCCTTACACCTCTGATAACCATAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD114591             [TTTAGTATCTTTTGAGATTTCTTCAATTAATATGTCATTTTAGTATATTCTCAGTGATTTTTCGTTACTAAACTAATTATACTCTTTATGTCTCCGTATTATCCTTCTGCATTTCAATTTTTTCCGGTGTAAGTTTTTAACAATCCATGTTTGCCGGATGTACTGTTAAATTGATTTATCCATTTGTATGCGCATCGATTGTTTACATCTATGCAAAAGACATTTCTAATTGTTTTCAAATCGTTTACTTTTTCTTTCCAAATTATTATCTACCGAATTTTCTTTGAAATTAGGTTGAAAGATCACGACTGGCGAAAGCACGTGCAAAAAAGGCTGAGGCTTTATAAGCTTAATCAGTTTTAGAGGCTCGGTGTGCTCAACTTGAATAGGTACTAATACATCAGCACAAAGCCCATAACCCTTACACCTTTGAT ACGCTAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD095603             [                                                                                                                                                                                                                                                                                                           AGAGCACGACTGGCGAAAGCACGTGCAGAAAAGGCTGAGGCTTTAGAAGCTAAATCAGTTTTAGAGGCTCGGTGTGCTCAACTTGAAGAGGCACTAATACATCAGCAAAAATGCCAAAACCCTTACACCTCTGATAACCATAATCGTTTGTTCGATACCTATGCAGTTAATTCGCCCTCCACTCAAGCTTCTCAATGTATATCCAATCCATACAACTGTAAAGTTGCTTTCAGTCCCATGAAGAAAGAAAATCAAAAAGACGTTAAAATAGATAGTATACTATGTTCATATATAATTCTGAAATGTAATAGGTAGGCGATGAATGTAAACATGGGGGAATTAAATAATGATGAATAACTGTTGATAATTACTAATCCACAATTAATGCTATTGCTAACGTCACATCACTTATAAACGTCTACTCAAAAA                                                                                                                                                                                                             ]
[+] EMBL CD128554             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          atagcagaTATAATTAAT GTATACTATGTTCATATATAATTCTGAAATGTAATAGGTAGGCGATGAATGTAAACATGGGGGAATTAAATAATGATGAATAACTGTTGATAATTACTAATCCACAATTAATGCTATTGCTAACGTCACATCACTTATAAACGTCTACTCAAAAAACGATAAGCAGCGACTAGGCCGACAGCTCCAACAGCTATTGTTGCTACACTAGTCAAAGCGTTTCGAAGTGAACGTAACGTATCATCATCGGTGAAACCACCAGTGACTAAACCAATTAAACTATTATTTCCAATTGTTGATGAGGTTACTGTTGATCGGTCAGTTTCATCACGTTGTGATTCAAAATTAATAAGTCCCTCCCAA]




>consensus_10393#1
TTTAGTATCTTTTCAGATTTCTTCAATTAATATGTCATTTTTTTATATTCTCAGTGATTT
TTCGTTACTAAACTAATTATACTCTTTATGTCTCCGTATTATCCTTCTGCATTTCAATTT
TTTCCGGTGTAAGTTTTTAACAATCCATGTTTGCCGGATGTACTGTTAAATTGATTTATC
CATTTGTATGCGCATCGATTGTTTACATCTATGCAAAAGACATTTCTAATTGTTTTCAAA
TCGTTTACTTTTTCTTTCCAAATTATTATCTACCGAATTTTCTTTGAAATTAGGTTGAAA
GAGCACGACTGGCGAAAGCACGTGCAGAAAAGGCTGAGGCTTTAGAAGCTAAATCAGTTT
TAGAGGCTCGGTGTGCTCAACTTGAAGAGGTACTAATACATCAGCAAAAATGCCAAAACC
CTTACACCTCTGATAACCATAATCGTTTGTTCGATACCTATGCAGTTAATTCGCCCTCCA
CTCAAGCTTCTCAATGTATATCCAATCCATACAACTGTAAAGTTGCTTTCAGTCCCATGA
AGAAAGAAAATCAAAAAGACGTTAAAATAGATAGTATACTATGTTCATATATAATTCTGA
AATGTAATAGGTAGGCGATGAATGTAAACATGGGGGAATTAAATAATGATGAATAACTGT
TGATAATTACTAATCCACAATTAATGCTATTGCTAACGTCACATCACTTATAAACGTCTA
CTCAAAAAACGATAAGCAGCGACTAGGCCGACAGCTCCAACAGCTATTGTTGCTACACTA
GTCAAAGCGTTTCGAAGTGAACGTAACGTATCATCATCGGTGAAACCACCAGTGACTAAA
CCAATTAAACTATTATTTCCAATTGTTGATGAGGTTACTGTTGATCGGTCAGTTTCATCA
CGTTGTGATTCAAAATTAATAAGTCCCTCCCAA

consensusID : consensus_10393#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 584
fasta sequence

                              [TGATGAAACTGACCGATCAACAGTAACCTCATCAACAATTGGAAATAATAGTTTAATTGGTTTAGTCACTGGTGGTTTCACCGATGATGATACGTTACGTTCACTTCGAAACGCTTTGACTAGTGTAGCAACAATAGCTGTTGGAGCTGTCGGCCTAGTCGCTGCTTATCGTTTTTTGAGTAGACGTTTATAAGTGATGTGACGTTAGCAATAGCATTAATTGTGGATTAGTAATTATCAACAGTTATTCATCATTATTTAATTCCCCCATGTTTACATTCATCGCCTACCTATTACATTTCAGAATTATATATGAACATAGTATACATTAATTATATCTGCTTACATCTTCATTCCGGTGACATTTTTATATATTCATACTTGAATATCTTCTCTTATACATGCAAAAAATAACGAATAAACTATTCAGTTGTAATTTTTCTTTCCATATGAAGAAAAGAATCTTCAATGTTTGCTCTTCTCCCACCTTCAATACATCCTTCATGTATTCATCTATCGTCGATAAAACATTGTCGGTGATGTTCAACAATGACAACTACATCCGTTGTTTTAATGATCTATAA]

[-] EMBL CD094754             [TGATGAAACTGACCGATCAACAGTAACCTCATCAACAATTGGAAATAATAGTTTAATTGGTTTAGTCACTGGTGGTTTCACCGATGATGATACGTTACGTTCACTTCGAAACGCTTTGACTAGTGTAGCAACAATAGCTGTTGGAGCTGTCGGCCTAGTCGCTGCTTATCGTTTTTTGAGTAGACGTTTATAAGTGATGTGACGTTAGCAATAGCATTAATTGTGGATTAGTAATTATCAACAGTTATTCATCATTATTTAATTCCCCCATGTTTACATTCATCGCCTACCTATTACATTTCAGAATTATATATGAACATAGTATACATTAATTATATCTGCTTACATCTTCATTCCGGTGACATTTTTATATATTCATACTTGAATATCTTCTCTTATACATGCAAAAAATAACGAATAAACTATTCAGTTGTAATTTTTCTTTCCATATGAAGAAAAGAATCTTCAATGTTTGCTCTTCTCCCACCTTCAATACATCCTTCATGTATTCATCTATCGTCGATAAAACATTGTCGGTGATGTTCAACAATGACAACTACATCCGTTGTTTTAATGATCTATAA]
[-] EMBL CD153429             [                                                                                                                                                         CCTAGTCGCTGCTTATCGTTTTTTGAGTAGACGTTTATAAGTGATGTGACGTTAGCAATAGCATTAATTGTGGATTAGTAATTATCAACAGTTATTCATCATTATTTAATTCCCCCATGTTTACATTCATCGCCTACCTATTACATTTCAGAATTATATATGAACATAGTATACATTAATTATATCTGCTTACATCTTCATTCCGGTGACATTTTTATATATTCATACTTGAATATCTTCTCTTATACATGCAAAAAATAACGAATAAACTATTCAGTTGTAATTTTTCTTTCCATATGAAGAAAAGAATCTTCAATGTTTGCTCTTCTCCCACCTTCAATACATCCTTCATGTATTCATNTATCGTCGATAAAACATTGTCGGTGATGTTCAACAATGACAACTACATCCGTTGTTTTAATGATCTA   ]
[-] EMBL CD153053             [                                                                                                                                                         CCTAGTCGCTGCTTATCGTTTTTTGAGTAGACGTTTATAAGTGATGTGACGTTAGCAATAGCATTAATTGTGGATTAGTAATTATCAACAGTTATTCATCATTATTTAATTCCCCCATGTTTACATTCATCGCCTACCTATTACATTTCAGAATTATATATGAACATAGTATACATTAATTATATCTGCTTACATCTTCATTCCGGTGACATTTTTATATATTCATACTTGAATATCTTCTCTTATACATGCAAAAAATAACGAATAAACTATTCAGTTGTAATTTTTCTTTCCATATGAAGAAAAGAATCTTCAATGTTTGCTCTTCTCCCACCTTCAATACATCCTTCATGTATTCATCTATCGTCGATAAGACATTGTCGGTGATGTTCAACAATGACAACTACATCCGTTGTTTTAATGATCTA   ]




>consensus_10393#2
TGATGAAACTGACCGATCAACAGTAACCTCATCAACAATTGGAAATAATAGTTTAATTGG
TTTAGTCACTGGTGGTTTCACCGATGATGATACGTTACGTTCACTTCGAAACGCTTTGAC
TAGTGTAGCAACAATAGCTGTTGGAGCTGTCGGCCTAGTCGCTGCTTATCGTTTTTTGAG
TAGACGTTTATAAGTGATGTGACGTTAGCAATAGCATTAATTGTGGATTAGTAATTATCA
ACAGTTATTCATCATTATTTAATTCCCCCATGTTTACATTCATCGCCTACCTATTACATT
TCAGAATTATATATGAACATAGTATACATTAATTATATCTGCTTACATCTTCATTCCGGT
GACATTTTTATATATTCATACTTGAATATCTTCTCTTATACATGCAAAAAATAACGAATA
AACTATTCAGTTGTAATTTTTCTTTCCATATGAAGAAAAGAATCTTCAATGTTTGCTCTT
CTCCCACCTTCAATACATCCTTCATGTATTCATCTATCGTCGATAAAACATTGTCGGTGA
TGTTCAACAATGACAACTACATCCGTTGTTTTAATGATCTATAA

consensusID : consensus_10393#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 488
fasta sequence

                              [TTCTAATCGGCTAAGAAAAAGAAAGAGATTTCATGGCTTATCATCTAGCATTTACTATTACTGATCGACATGATGATGATAAGCTCGTGTTGCTCTTGTTTATATCTGCTCCCTTTATTTTTAACAGTTTTTTTCTTCTTATCTCGACTGATTGGTTTTGTCCTGTGTGTTTATAGATGTTTCCAAACTTCGTGCATATTACAGGATAAATCGTTTCTATCTACACTAACCAGTCAAACTTGTATGTTGTTGATGACGGAGCTTATCGATGAAATCGGTGATGTGTCTGATCTTTTTTTTATAAGAAAAAATGTTAAACATAACACAAACTATCCAATTCATCTTCCCTACGTATCTACCTCTGTCAGCATTATTATTATTATTATGGTTATTACCATCGTGTTAATGATGATCAACACGAACATCTTTTGTTGGTGTCGTTTGTCTCTCTCTCTCTCTCTACCCAACTCCTCCTCTTCTTTCTCTGG]

[+] EMBL AI067429             [TTCTAATCGGCTAAGAAAAAGAAAGAGATTTCATGGCTTATCATCTAGCATTTACTATTACTGATCGACATGATGATGATAAGCTCGTGTTGCTCTTGTTTATATCTGCTCCCTTTATTTTTAACAGTTTTTTTCTTCTTATCTCGACTGATTGGTTTTGTCCTGTGTGTTTATAGATGTTTCCAAACTTCGTGCATATTACAGGATAAATCGTTTCTATCTACACTAACCAGTCAAACTTGTATGTTGTTGATGACGGAGCTTATCGATGAAATCGGTGATGTGTCTGATCTTTTTTTTATAAGAAAAAATGTTAAACATAACACAAACTATCCAATTCATCTTCCCTACGTATCTACCTCTGTCAGCATTATTATTATTATTATGGTTATTACCATCGTGTTAATGATGATCAACACGAACATCTTTTGTTGGTGTCGTTTGTCTCTCTCTCTCTCTCTACCCAACTCCTCCTCTTCTTTCTCTGG]
[+] EMBL AI067023             [TTCTAATCGGCTAAGAAAAAGAAAGAGATTTCATGGCTTATCATCTAGCATTTACTATTACTGATCGACATGATGATGATAAGCTCGTGTTGCTCTTGTTTATATCTGCTCCCTTTATTTTTAACAGTTTTTTTCTTCTTATCTCGACTGATTGGTTTTGTCCTGTGTGTTTATAGATGTTTCCAAACTTCGTGCATATTACAGGATAAATCGTTTCTATCTACACTAACCAGTCAAACTTGTATGTTGTTGATGACGGAGCTTATCGATGAAATCGGTGATGTGTCTGATCTTTTTTTTA                                                                                                                                                                                           ]




>consensus_10393#3
TTCTAATCGGCTAAGAAAAAGAAAGAGATTTCATGGCTTATCATCTAGCATTTACTATTA
CTGATCGACATGATGATGATAAGCTCGTGTTGCTCTTGTTTATATCTGCTCCCTTTATTT
TTAACAGTTTTTTTCTTCTTATCTCGACTGATTGGTTTTGTCCTGTGTGTTTATAGATGT
TTCCAAACTTCGTGCATATTACAGGATAAATCGTTTCTATCTACACTAACCAGTCAAACT
TGTATGTTGTTGATGACGGAGCTTATCGATGAAATCGGTGATGTGTCTGATCTTTTTTTT
ATAAGAAAAAATGTTAAACATAACACAAACTATCCAATTCATCTTCCCTACGTATCTACC
TCTGTCAGCATTATTATTATTATTATGGTTATTACCATCGTGTTAATGATGATCAACACG
AACATCTTTTGTTGGTGTCGTTTGTCTCTCTCTCTCTCTCTACCCAACTCCTCCTCTTCT
TTCTCTGG

consensusID : consensus_10393#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 437
fasta sequence

                              [CAATTAAACTATTATTTCCAATTGTTGATGAGGTTACTGTTGATCGGTCAGTTTCATCACGTTGTGATTCAAAATTAATAAGTCCCTCCCAATTTCCATGAGATGATATCCAATTCCAAAGTCCTCGGGGACCATGTATAAACTCAACTGTCCACAAAGTATAATCCTGAAATGTAATAGGTAGGCGATGAATGTAAACATGGGGGAATTAAATAATGATGAATAACTGTTGATAATTACTAATCCACAATTAATGCTATTGCTAACGTCCCATCACTTATAAACGTCTACTCAAAAAACGATAAGCAGCGACTAGGCCGACAGCTCCAACAGCTATTGTTGCTACACTAGTCAAAGCGTTTCGAAGTGAACGTAACGTATCATCATCGGTGAAACCACCAGTGACTAAACCAATTAAACTATTATTTCCAATTGTT]

[+] EMBL CD162923             [CAATTAAACTATTATTTCCAATTGTTGATGAGGTTACTGTTGATCGGTCAGTTTCATCACGTTGTGATTCAAAATTAATAAGTCCCTCCCAATTTCCATGAGATGATATCCAATTCCAAAGTCCTCGGGGACCATGTATAAACTCAACTGTCCACAAAGTATAATCCTGAAATGTAATAGGTAGGCGATGAATGTAAACATGGGGGAATTAAATAATGATGAATAACTGTTGATAATTACTAATCCACAATTAATGCTATTGCTAACGTCCCATCACTTATAAACGTCTACTCAAAAAACGATAAGCAGCGACTAGGCCGACAGCTCCAACAGCTATTGTTGCTACACTAGTCAAAGCGTTTCGAAGTGAACGTAACGTATCATCATCGGTGAAACCACCAGTGACTAAACCAATTAAACTATTATTTCCAATTGTT]




>consensus_10393#4
CAATTAAACTATTATTTCCAATTGTTGATGAGGTTACTGTTGATCGGTCAGTTTCATCAC
GTTGTGATTCAAAATTAATAAGTCCCTCCCAATTTCCATGAGATGATATCCAATTCCAAA
GTCCTCGGGGACCATGTATAAACTCAACTGTCCACAAAGTATAATCCTGAAATGTAATAG
GTAGGCGATGAATGTAAACATGGGGGAATTAAATAATGATGAATAACTGTTGATAATTAC
TAATCCACAATTAATGCTATTGCTAACGTCCCATCACTTATAAACGTCTACTCAAAAAAC
GATAAGCAGCGACTAGGCCGACAGCTCCAACAGCTATTGTTGCTACACTAGTCAAAGCGT
TTCGAAGTGAACGTAACGTATCATCATCGGTGAAACCACCAGTGACTAAACCAATTAAAC
TATTATTTCCAATTGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10393#1      --TTTAGTATCTTTTCAGATTTCTTCAATTAATATGTCATTTTTTTATATTCTCAGTGAT 58
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      CGGCACGAGGACAAGAAAAGAATCTTAATGTTTGCTCTTCTCCTCCTTCAATACATCCTT 60
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      ------------------------------------------------------------
                                                                                   

consensus_10393#1      TTTTCGTTACTAAACTAATTATACTCTTTATGTCTCCGTATTATCCTTCTGCATTTCAAT 118
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      CATGTATTCATCTATCGTCGATAAAACATTGTCGGTGATGTTCAACAATGACAACTACAT 120
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      ------------------------------------------------------------
                                                                                   

consensus_10393#1      TTTTTCCGGTGTAAGTTTTTAACAATCCATGTTTGCCGGATGTACTGTTAAATTGATTTA 178
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      CCGTTGTTTTAATGATCTATAAACTATTCAACGCAGTAACAGTACCATTGATGCTCTTTG 180
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      ------------------------------------------------------------
                                                                                   

consensus_10393#1      TCCATTTGTATGCGCATCGATTGTTTACATCTATGCAAAAGACATTTCTAATTGTTTTCA 238
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      TCTGTGTGCGTATTTTCTTCGCACATTCTTCCATAAAATTATGAATGGATTCACACATAT 240
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      ------------------------------------------------------------
                                                                                   

consensus_10393#1      AATCGTTTACTTTTTCTTTCCAAATTATTATCTACCGAATTTTCTTTGAAATTAGGTTGA 298
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      ACACATACATCCACTCTCTTCATTTTGTGTTGTTCCTCTTTCTCGATTAACATTTCTGTC 300
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      ------------------------------------------TGATGAAACTGACCGATC 18
                                                                                   

consensus_10393#1      AAGAGCACGACTGGCGAAAGCACGTGCAGAAAAGGCTGAGGCTTTAGAAGCTAAATCAGT 358
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      GATAATGAGAGTGTTTGTGTGTTGATTTCGTTTCATTTGAGTCTTCTTAATTT--TTTTT 358
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      AACAGTAACCTCATCAACAATTGGAAATAATAGTTTAATTGGTTTAGTCACTGG-TGGTT 77
                                                                                   

consensus_10393#1      TTTAGAGGCTCGGTGTGCTCAACTTGAAGAGGTACTAATACATCAGCAAAAATGCCAAAA 418
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      CCCACGTTTCTGTTTGCCTTTTATTCAGTGACGATTCCTTGTTCATGGCTTATCATCTAG 418
consensus_10393#3      -------TTCTAATCGGCTAAGAAAAAGAAAGAGAT-----TTCATGGCTTATCATCTAG 48
consensus_10393#2      TCACCGATGATGATACGTTACGTTCACTTCGAAACGCTTTGACTAGTGTAGCAACAATAG 137
                                                                                   

consensus_10393#1      CCCTTAC-ACCTCTGATAACCATAAT--CGTTTGTTCGATA-CCTATGCAGTTAATTCGC 474
consensus_10393#4      CAATTAA-ACTATTATTTCCAATTGT--TGATGAGGTTACT-GTTGATCGGTCAGTTT-- 54
consensus_10393#0      CATTTACTATTACTGATCGACATGATGATGATAAGCTCGTG-TTGCTCTTGTTTATATCT 477
consensus_10393#3      CATTTACTATTACTGATCGACATGATGATGATAAGCTCGTG-TTGCTCTTGTTTATATCT 107
consensus_10393#2      CTGTTGGAGCTGTCGGCCTAGTCGCTGCTTATCGTTTTTTGAGTAGACGTTTATAAGTGA 197
                       *  **                    *     *                   *        

consensus_10393#1      CCTCCACTCAAGCTTCTCAATGTATAT-CCAATCCATACAACTGTAAAGTTGCTTTCAGT 533
consensus_10393#4      CATCACGTTGTGATTCAAAATTAATAAGTCCCTCCCAATTTCCATGAGATGATATCCAAT 114
consensus_10393#0      GCTCCCTTTATTTTTAACAGTTTTTTT----CTTCTTATCTCGACTGATTGGTTTTGTCC 533
consensus_10393#3      GCTCCCTTTATTTTTAACAGTTTTTTT----CTTCTTATCTCGACTGATTGGTTTTGTCC 163
consensus_10393#2      TGTGACGTTAGCAATAGCATTAATTGT-GGATTAGTAATTATCAACAGTTATTCATCATT 256
                         *    *      *   * *   *       *    *           *          

consensus_10393#1      CCCATGAAGAAAGAAAATCAAAAAGACGTTAAAATAGATAGTATACT--ATGTTCATATA 591
consensus_10393#4      TCCAAAGTCCTCGGGGACCATGTA-----TAAACTCAACTGTCCACA--AAGT------A 161
consensus_10393#0      TGTGTGTTTATAGATGTTTCCAAA-----CTTCGTGCATATTACAGG--ATAA------A 580
consensus_10393#3      TGTGTGTTTATAGATGTTTCCAAA-----CTTCGTGCATATTACAGG--ATAA------A 210
consensus_10393#2      ATTTAATTCCCCCATGTTTACATTCA---TCGCCTACCTATTACATTTCAGAATTATATA 313
                                                         *      *  *    *         *

consensus_10393#1      TAATTCTGAAATGTAATAGGTAGGCGA---TGAATGTAAAC-ATGGGGGAATTAAATAAT 647
consensus_10393#4      TAATCCTGAAATGTAATAGGTAGGCGA---TGAATGTAAAC-ATGGGGGAATTAAATAAT 217
consensus_10393#0      TCGTTTCTATCTACACTAACCAGTCAAACTTGTATGTTGTTGATGACGGAGCTTATCGAT 640
consensus_10393#3      TCGTTTCTATCTACACTAACCAGTCAAACTTGTATGTTGTTGATGACGGAGCTTATCGAT 270
consensus_10393#2      TGAACATAGTATACATTAATTATATCTGCTTACATCTTCATTCCGGTGACATTTTTATAT 373
                       *          *  * **   *        *  ** *       *  *    *     **

consensus_10393#1      GA--TGAATAACTGTTGATAATTACTAATCCACAATTAATGC-TATTGCTAACGTCACAT 704
consensus_10393#4      GA--TGAATAACTGTTGATAATTACTAATCCACAATTAATGC-TATTGCTAACGTCCCAT 274
consensus_10393#0      GAAATCGGTGA-TGTGTCTGATCTTTTTTTTATAAGAAAAAAATGTTA--AACATAACAC 697
consensus_10393#3      GAAATCGGTGA-TGTGTCTGATCTTTTTTTTATAAGAAAAAA-TGTTA--AACATAACAC 326
consensus_10393#2      A---TTCATA--CTTGAATATCTTCTCTTATACATGCAAAAAATAACG--AATAAACTAT 426
                           *   *     *   *      *  *  * *   **    *      **      * 

consensus_10393#1      CACTTATAAACGTCTACTCAAAAAACGATAAGCAGCGACTAGGCCGACAGCTCCAACAGC 764
consensus_10393#4      CACTTATAAACGTCTACTCAAAAAACGATAAGCAGCGACTAGGCCGACAGCTCCAACAGC 334
consensus_10393#0      AAACTATCCAATTCATCTTCCCTACGTATCTACCTCTGTCAGCATTATTATTATTATTAT 757
consensus_10393#3      AAACTATCCAATTCATCTTCCCTACGTATCTACCTCTGTCAGCATTATTATTATTATTAT 386
consensus_10393#2      TCAGT-TGTAATTTTTCTTTCCATATGAAGAAAAGAATCTTCAATGTTTGCTCTT-CTCC 484
                           * *  *  *   **         *                       *        

consensus_10393#1      TATTGTTGCTACACTAGTCAAAGCGTTTCGAAGTGAACGTAACGTATCATCATCGGTGAA 824
consensus_10393#4      TATTGTTGCTACACTAGTCAAAGCGTTTCGAAGTGAACGTAACGTATCATCATCGGTGAA 394
consensus_10393#0      GGTTATTACCAT-CGTGTTAATGATGATCAACACGAACATCTTTTGTTGGTGTCGTTTGT 816
consensus_10393#3      GGTTATTACCAT-CGTGTTAATGATGATCAACACGAACATCTTTTGTTGGTGTCGTTTGT 445
consensus_10393#2      CACCTTCAATACATCCTTCA---TGTATTCATCTATCGTCGATAAAACATTGTCGGTGAT 541
                            *    *      * *       *  *                     *** *   

consensus_10393#1      ACCACCAGTGACTAAACCAATTAAACTATTATTTCCAATTGTTGATGAGGTTACTGTTGA 884
consensus_10393#4      ACCACCAGTGACTAAACCAATTAAACTATTATTTCCAATTGTT----------------- 437
consensus_10393#0      CTCTC---TCTCTCTCTCTACCCAACTCCTCCTCTTCTTTCTCTGTAAATCAACACTTAT 873
consensus_10393#3      CTCTC---TCTCTCTCTCTACCCAACTCCTCCTCTTCTTTCTCTGG-------------- 488
consensus_10393#2      GTT-----CAACAATGACAACTACATCCGTTGTTTTAATGATCTATAA------------ 584
                                  *     * *    *    *  *     *  *                  

consensus_10393#1      TCGGTCAGTTTCATCACGTTGTGATTCAAAATTAATAAGTCCCTCCCAA----------- 933
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      TCGGTTATTCCAACTACGTATGTATATGTGTATAATTGTTTGTTTTATATACTGTTCATT 933
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      ------------------------------------------------------------
                                                                                   

consensus_10393#1      ------------------------------------------------------------
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      GTAATTTCTTCATACCATTTTCTAGTTAATGGTAATTGTTACATTCATAATTGATCAAAC 993
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      ------------------------------------------------------------
                                                                                   

consensus_10393#1      ------------------------------------------------------------
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      GTATAACAATCATTGAATCTATTTCATTATTAAAATGATAAGTTAACTTTTAATCGTTTT 1053
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      ------------------------------------------------------------
                                                                                   

consensus_10393#1      ------------------------------------------------------------
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      ACACTTACATGTTGGGTCATAGAAACAATAAGTTTGTCCCTCCCCACACATATATATATA 1113
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      ------------------------------------------------------------
                                                                                   

consensus_10393#1      ------------------------------------------------------------
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      TACACAATTGTTTATTTTATAGCTTTATTATTATTATTACTATTATGCTTTTACAGTAAG 1173
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      ------------------------------------------------------------
                                                                                   

consensus_10393#1      ------------------------------------------------------------
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      TATAAACTAATCATCCTGTTGTTTTTTTTTCATCGTAGAGAGAATATCATTTTACTTGAA 1233
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      ------------------------------------------------------------
                                                                                   

consensus_10393#1      ------------------------------------------------------------
consensus_10393#4      ------------------------------------------------------------
consensus_10393#0      TAATAATGTGTTGTGTTCTTTTTCTTGATTACCATCATTATTGTATCTTCCAAATAATAA 1293
consensus_10393#3      ------------------------------------------------------------
consensus_10393#2      ------------------------------------------------------------
                                                                                   

consensus_10393#1      ----
consensus_10393#4      ----
consensus_10393#0      AATA 1297
consensus_10393#3      ----
consensus_10393#2      ----