cluster # 10396

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Schistosoma mansoni
cluster # 10396 cluster # 10396 Sequences # 16 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10396#0 length = 1463 sequences # 12
consensus_10396#1 length = 453 sequences # 1

consensus_10396#2 length = 419 sequences # 1
consensus_10396#3 length = 415 sequences # 1
consensus_10396#4 length = 225 sequences # 1

consensusID : consensus_10396#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1463
fasta sequence

                              [TCATTTACCATATTCAAACGAGTTTCCTATGGTAATTGAAAATAACTAGAAAATCTCCATAGGACTTTGTTTTTGTGACTTCAAATTCGTTCTTTAATGTCAGCAAATGTGCCGTACCATTTTGATAATTTATTACTGATAGTAATCTCCGACATGGATATTTACTTTGTCACGGTTTTAGATTTTAGTTAAACCAACTAGTGTTTGAAAACTCAAAGATGGGACATCTCACTACAAAGCTGCTTCACATTCTAGCGTATTAGAGAAAATTTTCATTGCCAGTGGTAAATCGATAAAAAAGACTATTGTAAATTATGTTTGGAAGTGATATTTATAATAAAAGTAGTAAGAATCTCTCACACTGCTTGAACTGGATTCTACTGAAGTTAATTAACTGTATAATATAA-AATATTT-CTAGTATC-TAACTAGTCAGGCATATGCCTGTGTATTAGGCTTTCACCTTCATTTATTATGTTTGCCCTTAAAATACTTTTTGACTTTTACTGGCGAGGATTGATTGAACAAGCTTCGAATAAGTCACATATTAAATAAAAGTTAAATCATCGCAACATAGTTCTGCCACATACAGAATACTCCATTAAATTGTTTACCAAATAGATAAACTAGTCCACTATTTTAGTTATATAGGCGTGTATGAAATATTTCTAGTTTATAGCGCATGTTTTATCCTAATTGAAATTTAAATTAAC-T-TGTTTTATTT-GATTTTACTAGTTTTGAATCCCAGGTATCAGATAAAACACTCAACACTCCAAATCGCAACGTTAATGGTTCGTCAAAAGTTAAAGAAGCTATAAACACTTCCCAGGAAACTCCCCTTCAAGAAGTAGTCACTAATCACAGCAGCAGAACGCAAATGCGTACATCTGTAATTGGATCTACAGATTCTCCGCGACCTTTAACACCGAATTCTCCGGCCTTGAGTAGTGTTGGTAAGGTCGAATCTCCTGGAAGGGCGAATTCAGGAGGGAGTTCACCGTCCATAGTCAGGGTGTTTGCACCAGTGAAAAAACAATCGTCTTTAAACGATGACAA-ATCAGATGTTGATGATGACGATGATGATATTGAA-GAAGTGTTA-AGGGCTGAAGAGTCAGTGGCAGATGATACAGTCGACCAAACTGTTGATTCAGAACAGAGTTTAGGCTTAGACTATGTTGAAGAAATACAACCACTACAAAACTCTGTCTCATTAACACGTACTGTTTAGTGGCCATGAATTGTTATATTCTATAATGACGTGAA-ATTTTCTTAGGTTTCAGGTTGTTTTCCTTTGATTTCTGCATCGTATAACAATGATCCAATGTTTCTTTTCTAGTGTTTTGTACTATTTGTTCCCTGATTTGCGATTCGNTACTATCTATCGTTTTAGTAATATTTCCATTCAATTAACAAATCATTATGATAACCTGAATTTTCATGTGTTAATGCTAAAAATATATCAGTGT]

[+] EMBL CD202020             [TCATTTACCATATTCAAACGAGTTTCCTATGGTAATTGAAAATAACTAGAAAATCTCCATAGGACTTTGTTTTTGTGACTTCAAATTCGTTCTTTAATGTCAGCAAATGTGCCGTACCATTTTGATAATTTATTACTGATAGTAATCTCCGACATGGATATTTACTTTGTCACGGTTTTAGATTTTAGTTAAACCAACTAGTGTTTGAAAACTCAAAGATGGGACATCTCACTACAAAGCTGCTTCACATTCTAGCGTATTAGAGAAAATTTTCATTGCCAGTGGTAAATCGATAAAAAAGACTATTGTAAATTATGTTTGGAAGTGATATTTATAATAAAAGTAGTAAGAATCTCTCACACTGCTTGAACTGGATTCTACTGAAGTTAATTAACTGTATAATATAA AATATTT CTAGTATC TAACTAGTCAGGCATATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD201903             [ CATTTACCATATTCAAACGAGTTTCCTATGGTAATTGAAAATAACTAGAAAATCTCCATAGGACTTTGTTTTTGCGACTTCAAATTCGTTCTTTAATGTCAGCAAATGTGCCGTACCATTTTGATAATTTATTACTGATAGTAATCTCCGACATGGATATTTACTTTGTCACGGTTTTAGATTTTAGTTAAACCAACTAGTGTTTGAAAACTCAAAGATGGGACATCTCACTACAAAGCTGCTTCACATTCTAGCGTATTAGAGAAAATTTTCATTGCCAGTGGTAAATCGATAAAAAAGACTATTGTAAATTATGTTTGGAAGTGATATTTATAATAAAAGTAGTAAGAATCTCTCACACTGCTTGACGTGGATTCTACTGAAGTTAATTCACTGTATTATATAAGCATATTTAGTAGTATCGTGCCTAGTCAGGCATACGCCTGTGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD201987             [ CATTTACCATATTCAAACGAGTTTCCTATGGTAGTTGAAAATAACTAGAAAATCTCCATAGGACTTTGTTTTTGTGACTTCAAATTCGTTCTTTAATGTCAGCAAATGTGCCGTACCATTTTGATAATTTATTACTGATAGTAATCTCCGACATGGATATTTACTTTGTCACGGTTTTAGATTTTAGTTAAACCAACTAGTGTTTGAAAACTCAAAGATGGGACATCTCACTACAAAGCTGCTTCACATTCTAGCGTATTAGAGAAAATTTTCATTGCCAGTGGTAAATCGATAAAAAAGACTATTGTAAATTATGTTTGGAAGTGATATTTATAATAAAAGTAGTAAGAATCTCTCACACTGCTTGAACTGGATTCTACTGAAGTTAATTAACTGTATAATATAA AATATTT CTAGTATC TAACTAGTCAGGCATATGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD201978             [ CATTTACCATATTCAAACGAGTTTCCTATGGTAATTGAAAAAAACTAGACAATCTCCATAGGACTTTGTTTTTGTGACTTCAAATTCGTTCTTTAATGTCAGCAAATGTGCCGTACCATTTTGATAATTTATTACTGATAGTAATCTCCGACATGGATATTTACTTTGTCACGGTTTTAGATTTTAGTTAAACCAACTAGTG TTGAAAACTCAAAGATGGGACATCTCACTACAAAGCTGCTTCACATTCTAGCGTATTAGAGAAAATTTTCATTGCCAGTGGTAAATCGATAAAAAAGACTATTGTAAATTATGTTTGGAAGTGATATTTATAATAAAGGTAGTAAGAATCTCTCACACTGCTTGAACTGGATTCTACTGAAGTTAATTAACTGTATAATATAA AATATTT CTAGTATC TAACTAGTCAGGCATATGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD130775             [                                                                                                                                                                                                                                                                                                    ATAAAAAAGACTATTGTAAATTATGTTTGGAAGTGATATTTATAATAAAAGTAGTAAGAACCTCTCACACTGCTTGAACTGGATTCTACTGAAGTTAATTAACTGTATAATATAA CATATTT CTAGTATC CAACTAGTCAGGCATATGCCTGTGTATTAGGCTTTCACCTTCATTTATTATGTTTGCCCTTAAAATACTTTTTGACTTTTACTGGCGAGGATTGATTGAACAAGCTTCGAATAAGTCACATATTAAATAAAAGTTAAATCATCGCAACATAGTTCTGCCACATACAGAATACTCCATTAAATTGTTTACCAAATAGATAAACTAGTCCACTATTTTAGTTATATAGGCGTGTATGAAATATTTCTAGTTTATAGCGCATGTTTTATCCTAATTGAAATTTAAATTAAC TNTGTTTTATTT GATTCTACTAGTTTTGAATCCCAGGTATCAGATAAAACACTCAACACTCCAAATCGCAACGTTAATGGTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD060151             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTATATAGGCGTGTATGAAATATTTCTAGTTTATAGCGCATGTTTTATCCTAATTGAAATTTAAATTAAC T TGTTTTATTT GATTTTACTAGTTTTGAATCCCAGGTATCAGATAAAACACTCAACACTCCAAATCGCAACGTTAATGGTTCGTCAAAAGTTAAAGAAGCTATAAACACTTCCCAGGAAACTCCCCTTCAAGAAGTAGTCACTAATCACAGCAGCAGAACGCAAATGCGTACATCTGTAATTGGATCTACAGATTCTCCGCGACCTTTAACACCGAATTCTCCGGCCTTGAGTAGTGTTGGTAAGGTCGAATCTCCTGGAAGGGCGAATTCAGGAGGGTGTTCACCGTCCATAGTCAGGGTGTTTGCACCAGTGAAAAAACAATCGTCTTTAAACGATGACAA ATCAGATGTTGATGATGACGATGATGATATCGA                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD060152             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TATATAGGCGTGTATGAAATATTTCTAGTTTATAGCGCATGTTTTATCCTAATTGAAATTTAAATTAACTT TGTTTTATTTCGATTTTACTAGTTTTGAATCCCAGGTATCAGATAAAACACTCAACACTCCAAATCGCAACGTTAATGGTTCGTCAAAAGTTAAAGAAGCTATAAACACTTCCCAGGAAACTCCCCTTCAAGAAGTAGTCACTAATCACAGCAGCAGAACGCAAATGCGTACATCTGTAATTGGATCTACAGATTCTCCGCGACCTTTAACACCGAATTCTCCGGCCTTGAGTAGTGTTGGTAAGGTCGAATCTCCTGGAAGGGCGAATTCAGGAGGGTGTTCACCGTCCATAGTCAGGGTGTTTGCACCAGTGAAAAAACAATCGTCTTTAAACGATGACAA ATCAGATGTTGATGATGACGATGATGATATTGAA GAAGTGTTA AGGGCTGAAGAGTCAGTGGCAGATGATACAGTCGACCAAACTGTTGATTCAGAACAGAGTTTAGGCTTAGACTATGTTGAAGAAATACAA CACTACAAAA TCTGTCTCAT                                                                                                                                                                                                                                                                ]
[+] EMBL CD083893             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AACACTCCAAATCGCAACGTTAATGGTTCGTCAAAAGTTAAAGAAGCTATAAACACTTCCCAGGAAACTCCCCTTCAAGAAGTAGTCACTAATCACAGCAGCAGAACGCAAATGCGTACATCTGTAATTGGATCTACAGATTCTCCGCGACCTTTAACACCGAATTCTCCGGCCTTGAGTAGTGTTGGTAAGGTCGAATCTCCTGGAAGGGCGAATTCAGGAGGGAGTTCACCGTCCATAGTCAGGGTGTTTGCACCAGTGAAAAAACAATCGTCTTTAAACGATGACAA ATCAGATGTTGATGATGACGATGATGATATTGAA GAAGTGTTA AGGGCTGAAGAGTCAGTGGCAGATGATACAGTCGACCAAACTGTTGATTCAGAACAGAGTTTAGGCTTAGACTATGTTGAAGAAATACAACCACTACAAAACTCTGTCTCATTAACACGT                                                                                                                                                                                                                                                        ]
[-] EMBL CD152553             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTTGAGTAGTGTTGGTAAGGTCGAATCTCCTGGAAGGGCGAATTCAGGAGGGAGTTCACCGTCCATAGTCAGGGTGTTTGCACCAGTGAAACCACCTTTGTCTTTAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD079285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTGGAAGGGCGAATTCAGGAGGGAGTTCACCGTCCATAGTCAGGGTGTTTGCACCAGTGAAAAAACAATCGTCTTTAAACGATGACAA ATCAGATGTTGATGATGACGATGATGATATTGAA GAAGTGTTA AGGGCTGAAGAGTCAGTGGCAGATGATACAGTCGACCAAACTGTTGATTCAGAACAGAGTTTAGGCTTAGACTATGTTGAAGAAATACAACCACTACAAAACTCTGTCTCATTAACACGTACTGTTTAGTGGCCATGAATTGTTATATTCTATAATGACGTGAA ATTTTCTTAGGTTTCAGGTTGTTTTCCTTTGATTTCTGCATCGTATAACAATGATCCAATGTTTCTTTTCTAGTGTTTTGTACTATTTGTTCCCTGATTTGCGATTCGNTACTATCTATCGTTTTAGTAATATTTCCATTCAATTAACAAATCATTATGATAACCTGAATTTTCATGTGTTAATGCTAAAAATATATCAGTGT]
[+] EMBL CD084070             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gAGGGCGAATTCAGGAGGGAGTTCACCGTCCATAGTCAGGGTGTTTGCACCAGTGAAAAAACAATCGTCTTTAAACGATGACAACATCAGATGTTGATGATGACGAAGATTATATTGAACGAAGTGTTACAGGGCTGAAGAGTCAGTGGCAGATGATACAGTCGACCAAACTGTTGATTCAGAACAGAGTTTAGGCTTAGACTATGTTGAAGAAATACAACCACTA                                                                                                                                                                                                                                                                                ]
[+] EMBL CD187390             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAAAACAATCGTCTTTAAACGATGACAA ATCAGATGTTGATGATGACGATGATGATATTGAA GAAGTGTTA AGGGCTGAAGAGTCAGTGGCAGATGATACAGTCGACCAAACTGTTGATTCAGAACAGAGTTTAGGCTTAGACTATGTTGAAGAAATACAACCACTACAAAACTCTGTCTCATTAACACGTACTGTTTAGTGGCCATGAATTGTTATATTCTATAATGACGTGAACATTTTCTTA                                                                                                                                                                                                  ]




>consensus_10396#0
TCATTTACCATATTCAAACGAGTTTCCTATGGTAATTGAAAATAACTAGAAAATCTCCAT
AGGACTTTGTTTTTGTGACTTCAAATTCGTTCTTTAATGTCAGCAAATGTGCCGTACCAT
TTTGATAATTTATTACTGATAGTAATCTCCGACATGGATATTTACTTTGTCACGGTTTTA
GATTTTAGTTAAACCAACTAGTGTTTGAAAACTCAAAGATGGGACATCTCACTACAAAGC
TGCTTCACATTCTAGCGTATTAGAGAAAATTTTCATTGCCAGTGGTAAATCGATAAAAAA
GACTATTGTAAATTATGTTTGGAAGTGATATTTATAATAAAAGTAGTAAGAATCTCTCAC
ACTGCTTGAACTGGATTCTACTGAAGTTAATTAACTGTATAATATAAAATATTTCTAGTA
TCTAACTAGTCAGGCATATGCCTGTGTATTAGGCTTTCACCTTCATTTATTATGTTTGCC
CTTAAAATACTTTTTGACTTTTACTGGCGAGGATTGATTGAACAAGCTTCGAATAAGTCA
CATATTAAATAAAAGTTAAATCATCGCAACATAGTTCTGCCACATACAGAATACTCCATT
AAATTGTTTACCAAATAGATAAACTAGTCCACTATTTTAGTTATATAGGCGTGTATGAAA
TATTTCTAGTTTATAGCGCATGTTTTATCCTAATTGAAATTTAAATTAACTTGTTTTATT
TGATTTTACTAGTTTTGAATCCCAGGTATCAGATAAAACACTCAACACTCCAAATCGCAA
CGTTAATGGTTCGTCAAAAGTTAAAGAAGCTATAAACACTTCCCAGGAAACTCCCCTTCA
AGAAGTAGTCACTAATCACAGCAGCAGAACGCAAATGCGTACATCTGTAATTGGATCTAC
AGATTCTCCGCGACCTTTAACACCGAATTCTCCGGCCTTGAGTAGTGTTGGTAAGGTCGA
ATCTCCTGGAAGGGCGAATTCAGGAGGGAGTTCACCGTCCATAGTCAGGGTGTTTGCACC
AGTGAAAAAACAATCGTCTTTAAACGATGACAAATCAGATGTTGATGATGACGATGATGA
TATTGAAGAAGTGTTAAGGGCTGAAGAGTCAGTGGCAGATGATACAGTCGACCAAACTGT
TGATTCAGAACAGAGTTTAGGCTTAGACTATGTTGAAGAAATACAACCACTACAAAACTC
TGTCTCATTAACACGTACTGTTTAGTGGCCATGAATTGTTATATTCTATAATGACGTGAA
ATTTTCTTAGGTTTCAGGTTGTTTTCCTTTGATTTCTGCATCGTATAACAATGATCCAAT
GTTTCTTTTCTAGTGTTTTGTACTATTTGTTCCCTGATTTGCGATTCGNTACTATCTATC
GTTTTAGTAATATTTCCATTCAATTAACAAATCATTATGATAACCTGAATTTTCATGTGT
TAATGCTAAAAATATATCAGTGT

consensusID : consensus_10396#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 453
fasta sequence

                              [ATAACGTCTCGTTACTAGGCCCAGCTAAAGGCAGCAGTATACTTAGCTCTAGAAAAGCACAACTATGCCGAAGGAATACCGCTTTCAAATCAGTCCATTCGGTCCTTATGGTCTACAGAAGATGCAAGGCTTGATCATAGCATCCCTATTGGTGGATTTTATGAATATGATGAAACTTGAAAATACGTTAAATGTCCTAATGGATGAAGCGCAGATGAAACATCTAGAACTTCTTGACCGAGATAAGTTGATGGCCATTCTACCTACTGAACGCAATTCAAGCAACTCTCCAGTGCTACTGAACTTGATTGAAACACTTAAACACCTCCGGAACCAAAAAATAGATGAAACGGATTCNNTCTACTTCAGCATCAAATAATTCACGTAATAATTTTGAATCCCCAGGATCAGATAAAACACTCAACACTCCAAATCGCAACGTTAATGGTTCGG]

[+] EMBL CD130654             [ATAACGTCTCGTTACTAGGCCCAGCTAAAGGCAGCAGTATACTTAGCTCTAGAAAAGCACAACTATGCCGAAGGAATACCGCTTTCAAATCAGTCCATTCGGTCCTTATGGTCTACAGAAGATGCAAGGCTTGATCATAGCATCCCTATTGGTGGATTTTATGAATATGATGAAACTTGAAAATACGTTAAATGTCCTAATGGATGAAGCGCAGATGAAACATCTAGAACTTCTTGACCGAGATAAGTTGATGGCCATTCTACCTACTGAACGCAATTCAAGCAACTCTCCAGTGCTACTGAACTTGATTGAAACACTTAAACACCTCCGGAACCAAAAAATAGATGAAACGGATTCNNTCTACTTCAGCATCAAATAATTCACGTAATAATTTTGAATCCCCAGGATCAGATAAAACACTCAACACTCCAAATCGCAACGTTAATGGTTCGG]




>consensus_10396#1
ATAACGTCTCGTTACTAGGCCCAGCTAAAGGCAGCAGTATACTTAGCTCTAGAAAAGCAC
AACTATGCCGAAGGAATACCGCTTTCAAATCAGTCCATTCGGTCCTTATGGTCTACAGAA
GATGCAAGGCTTGATCATAGCATCCCTATTGGTGGATTTTATGAATATGATGAAACTTGA
AAATACGTTAAATGTCCTAATGGATGAAGCGCAGATGAAACATCTAGAACTTCTTGACCG
AGATAAGTTGATGGCCATTCTACCTACTGAACGCAATTCAAGCAACTCTCCAGTGCTACT
GAACTTGATTGAAACACTTAAACACCTCCGGAACCAAAAAATAGATGAAACGGATTCNNT
CTACTTCAGCATCAAATAATTCACGTAATAATTTTGAATCCCCAGGATCAGATAAAACAC
TCAACACTCCAAATCGCAACGTTAATGGTTCGG

consensusID : consensus_10396#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 419
fasta sequence

                              [GAACCATTTGAATACTATTAAAACAAGTAACATCATCATCTTCTATTCGTACATTTGAAGTGGAATTTGATTTTCAGAGCAGTACGAATCTCAAGGATTGACATTGTTCACCTCCAAGCATATTAGTTGAGGACGCGATACGAAATCCCTTCAAATATTGTTTTTCATGTATACTCTTGATAAAATGGGAGATGAAGAAATCAATTTGAAGGAGGCTCTTATCAGGTCCCTAAACGAAGAGGGTATTTTACCAAAGTTTGAAGCCCAGCTAAAGGCAGCAGTATACTTAGCTCTAGAAAAGCACAACTATGCCGAAGGAATACCGCTTTCAAATCAGTCCATTCGGTCCTTATGGTCTACAGAAGATGCAAGGCTTGATCATAGCATCCCTATTGGTCGATTTTATGAATATGATGAAA]

[+] EMBL CD188231             [GAACCATTTGAATACTATTAAAACAAGTAACATCATCATCTTCTATTCGTACATTTGAAGTGGAATTTGATTTTCAGAGCAGTACGAATCTCAAGGATTGACATTGTTCACCTCCAAGCATATTAGTTGAGGACGCGATACGAAATCCCTTCAAATATTGTTTTTCATGTATACTCTTGATAAAATGGGAGATGAAGAAATCAATTTGAAGGAGGCTCTTATCAGGTCCCTAAACGAAGAGGGTATTTTACCAAAGTTTGAAGCCCAGCTAAAGGCAGCAGTATACTTAGCTCTAGAAAAGCACAACTATGCCGAAGGAATACCGCTTTCAAATCAGTCCATTCGGTCCTTATGGTCTACAGAAGATGCAAGGCTTGATCATAGCATCCCTATTGGTCGATTTTATGAATATGATGAAA]




>consensus_10396#2
GAACCATTTGAATACTATTAAAACAAGTAACATCATCATCTTCTATTCGTACATTTGAAG
TGGAATTTGATTTTCAGAGCAGTACGAATCTCAAGGATTGACATTGTTCACCTCCAAGCA
TATTAGTTGAGGACGCGATACGAAATCCCTTCAAATATTGTTTTTCATGTATACTCTTGA
TAAAATGGGAGATGAAGAAATCAATTTGAAGGAGGCTCTTATCAGGTCCCTAAACGAAGA
GGGTATTTTACCAAAGTTTGAAGCCCAGCTAAAGGCAGCAGTATACTTAGCTCTAGAAAA
GCACAACTATGCCGAAGGAATACCGCTTTCAAATCAGTCCATTCGGTCCTTATGGTCTAC
AGAAGATGCAAGGCTTGATCATAGCATCCCTATTGGTCGATTTTATGAATATGATGAAA

consensusID : consensus_10396#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 415
fasta sequence

                              [TACTTAGCTCTAGAAAAGCACAACTATGCCGAAGGAATACCGCTTTCAAATCAGTCCATTCGGTCCTTATGGTCTACAGAAGATGGTATAGTATACCCATTCCATATCTCACTCATTTTTAGCAAGGCTTGATCATAGCATCCCTATCGGTGGATTTTATGAATATGATGAAACTTGAAAATACGTTAAATGTCCTAATGGATGAAGCGCAGATGGTTTGGTGTTGTTTACAATCTTTAGCTTGTAGAAACATCTAGAACTTCTTGACCGAGATAAGTTGATGGCCATTCTACCTACTGAACGCAATTCAAGCAACTCTCCAGTGCTACTGAACTTGATTGAAACACTTAAACACCTCCGGAACCAAAAAATAGATGAAACAGATTCATCTACCTCAGCATCAAATAATTCACGT]

[+] EMBL CD184781             [TACTTAGCTCTAGAAAAGCACAACTATGCCGAAGGAATACCGCTTTCAAATCAGTCCATTCGGTCCTTATGGTCTACAGAAGATGGTATAGTATACCCATTCCATATCTCACTCATTTTTAGCAAGGCTTGATCATAGCATCCCTATCGGTGGATTTTATGAATATGATGAAACTTGAAAATACGTTAAATGTCCTAATGGATGAAGCGCAGATGGTTTGGTGTTGTTTACAATCTTTAGCTTGTAGAAACATCTAGAACTTCTTGACCGAGATAAGTTGATGGCCATTCTACCTACTGAACGCAATTCAAGCAACTCTCCAGTGCTACTGAACTTGATTGAAACACTTAAACACCTCCGGAACCAAAAAATAGATGAAACAGATTCATCTACCTCAGCATCAAATAATTCACGT]




>consensus_10396#3
TACTTAGCTCTAGAAAAGCACAACTATGCCGAAGGAATACCGCTTTCAAATCAGTCCATT
CGGTCCTTATGGTCTACAGAAGATGGTATAGTATACCCATTCCATATCTCACTCATTTTT
AGCAAGGCTTGATCATAGCATCCCTATCGGTGGATTTTATGAATATGATGAAACTTGAAA
ATACGTTAAATGTCCTAATGGATGAAGCGCAGATGGTTTGGTGTTGTTTACAATCTTTAG
CTTGTAGAAACATCTAGAACTTCTTGACCGAGATAAGTTGATGGCCATTCTACCTACTGA
ACGCAATTCAAGCAACTCTCCAGTGCTACTGAACTTGATTGAAACACTTAAACACCTCCG
GAACCAAAAAATAGATGAAACAGATTCATCTACCTCAGCATCAAATAATTCACGT

consensusID : consensus_10396#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 225
fasta sequence

                              [CGAGACGTTATCGACATTACACAGGTACTTCAAGCTTTGGTAGAATACCCTCTTCGTTTAGGGACCTGATAAGAGCCTCCTTCAAATTGATTTCTTCATCTCCCATTTTATCAAGAGTATACATGAAAAACAAAATATTTGAAGTGATTTCGTATCGCGACCTCAACTAATATGCTTGGAGGTGAACAATGTCAATCCTTGAGATTCGTACTGCTCTGAAAATCA]

[+] EMBL CD072808             [CGAGACGTTATCGACATTACACAGGTACTTCAAGCTTTGGTAGAATACCCTCTTCGTTTAGGGACCTGATAAGAGCCTCCTTCAAATTGATTTCTTCATCTCCCATTTTATCAAGAGTATACATGAAAAACAAAATATTTGAAGTGATTTCGTATCGCGACCTCAACTAATATGCTTGGAGGTGAACAATGTCAATCCTTGAGATTCGTACTGCTCTGAAAATCA]




>consensus_10396#4
CGAGACGTTATCGACATTACACAGGTACTTCAAGCTTTGGTAGAATACCCTCTTCGTTTA
GGGACCTGATAAGAGCCTCCTTCAAATTGATTTCTTCATCTCCCATTTTATCAAGAGTAT
ACATGAAAAACAAAATATTTGAAGTGATTTCGTATCGCGACCTCAACTAATATGCTTGGA
GGTGAACAATGTCAATCCTTGAGATTCGTACTGCTCTGAAAATCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      TCATTTACCATATTCAAACGAGTTTCCTATGGTAATTGAAAATAACTAGAAAATCTCCAT 60
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ----------------------------------------ATAACGTCTCGTTACTAGGC 20
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      AGGACTTTGTTTTTGTGACTTCAAATTCGTTCTTTAATGTCAGCAAATGTGCCGTACCAT 120
                                                                                   

consensus_10396#2      ----GAACCATTTGAATACTATTAAAACAAGTAACATCATCATCTTCTATTCGTACATTT 56
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      CCAGCTAAAGGCAGCAGTATACTTAGCTCTAGAAAAGCACAACTATGCCGAAGGAATACC 80
consensus_10396#3      -------------------TACTTAGCTCTAGAAAAGCACAACTATGCCGAAGGAATACC 41
consensus_10396#0      TTTGATAATTTATTACTGATAGTAATCTCCGACATGG-ATATTTACTTTGTCACGGTTTT 179
                                                                                   

consensus_10396#2      GAAGTGGAATTTGATTTTCAGAGCAGTACGAATCTCAAGGATTGACATTGTTCACC---- 112
consensus_10396#4      ----CGAGACGTTATCGACATTACA-CAGGTACTTCAAGCTTTGGTAGAATAC-CC---- 50
consensus_10396#1      GCTTTCAAATCAGTCCATTCGGTCCTTATGGTCTACAGAAGATG---------------- 124
consensus_10396#3      GCTTTCAAATCAGTCCATTCGGTCCTTATGGTCTACAGAAGATGGTATAGTATACCCATT 101
consensus_10396#0      AGATTTTAGTTAAACCAACTAGTGTTTGAAAACTCAAAGATGGGACATCTCACTACAAAG 239
                                                           *      *                

consensus_10396#2      -----TCCAAGCATATTAGTTGAGGACGCGATACGAAATCCCTTCAAATATTGTTTTTCA 167
consensus_10396#4      -----TCT-------TCGTTTAGGGACCTGATAAGAGCCTCCTTCAAATTGATTTCTTCA 98
consensus_10396#1      ---------------------CAAGGCTTGATCATAGCATCCCTATTGGTGGATTTTATG 163
consensus_10396#3      CCATATCTCACTCATTTTTAGCAAGGCTTGATCATAGCATCCCTATCGGTGGATTTTATG 161
consensus_10396#0      CTGCTTCACATTCTAGCGTATTAGAGAAAATTTTCATTGCCAGTGGTAAATCGATAAAAA 299
                                                      *   *    *  *          *     

consensus_10396#2      TGTATACTCTTGATAAAATGGGAGATGAAGA---AATCAATTTGAAGGA-GGCTCTTATC 223
consensus_10396#4      TCTCCCATTTTATCAAGAGTATACATGAAAAAC-AAAATATTTGAAGTG-ATTTCGTATC 156
consensus_10396#1      AATATGATGAAACTTGAAAATACGTTAAATGTC-CTAATGGATGAAGCGCAGATG----- 217
consensus_10396#3      AATATGATGAAACTTGAAAATACGTTAAATGTC-CTAATGGATGAAGCGCAGATGGTTTG 220
consensus_10396#0      AGACTATTGTAAATTATGTTTGGAAGTGATATTTATAATAAAAGTAGTAAGAATCTCTCA 359
                              *                    *              * **      *      

consensus_10396#2      AGGTCCCTAAA--------CGAAGAGGGTATTTTACCAAAGTTTGA-AGCCCAGCTAAAG 274
consensus_10396#4      GCGACCTCAAC--------TAATATGCTTGGAGGTGAACAATGTCA-ATCCTTG------ 201
consensus_10396#1      -----------------------------AAACATCTAGAACTTCTTGACCGAGATAAGT 248
consensus_10396#3      GTGTTGTTTACA--ATCTTTAGCTTGTAGAAACATCTAGAACTTCTTGACCGAGATAAGT 278
consensus_10396#0      CACTGCTTGAACTGGATTCTACTGAAGTTAATTAACTGTATAATATAAAATATTTCTAGT 419
                                                              *   *                

consensus_10396#2      GCAGCAGTATACTTAGCTCTAGAA--AAGCACAACTATGCCGAAGGAATACCGCTTTCAA 332
consensus_10396#4      --AGATTCGTACT--GCTCT-GAA--AATCA----------------------------- 225
consensus_10396#1      TGATGGCCATTCTACCTACTGAACGCAATTCAAGCAACTCTCCAGTGCTACTGAACTTGA 308
consensus_10396#3      TGATGGCCATTCTACCTACTGAACGCAATTCAAGCAACTCTCCAGTGCTACTGAACTTGA 338
consensus_10396#0      ATCTAACTAGTCAGGCATATGCCTGTGTATTAGGCTTTCACCTTCATTTATTATGTTTGC 479
                                  *       *                                        

consensus_10396#2      --ATCAGTCCATTCGGTCCTTATGGTCTACAGAAGATGCAAGGCTTGATCATAGCATCCC 390
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      --TTGAAACACTTAAACACCTCCGGAACCAAAAAATAGATGAAACGGATTCNNTCTACTT 366
consensus_10396#3      --TTGAAACACTTAAACACCTCCGGAACCAAAAAATAGATGAAACAGATTCAT-CTACCT 395
consensus_10396#0      CCTTAAAATACTTTTTGACTTTTACTGGCGAGGATTGATTGAACAAGCTTCGAATAAGTC 539
                                                                                   

consensus_10396#2      TATTGGTCGATTTTATGAATATGAT-GAAA------------------------------ 419
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      CAGCATCAAATAATTCACGTAATAA-TTTTGAATCCCCAGGATCAGATAAAACACTCAAC 425
consensus_10396#3      CAGCATCAAATAATTCACGT---------------------------------------- 415
consensus_10396#0      ACATATTAAATAAAAGTTAAATCATCGCAACATAGTTCTGCCACATACAGAATACTCCAT 599
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ACTCCAAATCGCAACGTTAATGGTTCGG-------------------------------- 453
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      TAAATTGTTTACCAAATAGATAAACTAGTCCACTATTTTAGTTATATAGGCGTGTATGAA 659
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      ATATTTCTAGTTTATAGCGCATGTTTTATCCTAATTGAAATTTAAATTAACTTGTTTTAT 719
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      TTGATTTTACTAGTTTTGAATCCCAGGTATCAGATAAAACACTCAACACTCCAAATCGCA 779
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      ACGTTAATGGTTCGTCAAAAGTTAAAGAAGCTATAAACACTTCCCAGGAAACTCCCCTTC 839
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      AAGAAGTAGTCACTAATCACAGCAGCAGAACGCAAATGCGTACATCTGTAATTGGATCTA 899
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      CAGATTCTCCGCGACCTTTAACACCGAATTCTCCGGCCTTGAGTAGTGTTGGTAAGGTCG 959
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      AATCTCCTGGAAGGGCGAATTCAGGAGGGAGTTCACCGTCCATAGTCAGGGTGTTTGCAC 1019
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      CAGTGAAAAAACAATCGTCTTTAAACGATGACAAATCAGATGTTGATGATGACGATGATG 1079
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      ATATTGAAGAAGTGTTAAGGGCTGAAGAGTCAGTGGCAGATGATACAGTCGACCAAACTG 1139
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      TTGATTCAGAACAGAGTTTAGGCTTAGACTATGTTGAAGAAATACAACCACTACAAAACT 1199
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      CTGTCTCATTAACACGTACTGTTTAGTGGCCATGAATTGTTATATTCTATAATGACGTGA 1259
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      AATTTTCTTAGGTTTCAGGTTGTTTTCCTTTGATTTCTGCATCGTATAACAATGATCCAA 1319
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      TGTTTCTTTTCTAGTGTTTTGTACTATTTGTTCCCTGATTTGCGATTCGNTACTATCTAT 1379
                                                                                   

consensus_10396#2      ------------------------------------------------------------
consensus_10396#4      ------------------------------------------------------------
consensus_10396#1      ------------------------------------------------------------
consensus_10396#3      ------------------------------------------------------------
consensus_10396#0      CGTTTTAGTAATATTTCCATTCAATTAACAAATCATTATGATAACCTGAATTTTCATGTG 1439
                                                                                   

consensus_10396#2      ------------------------
consensus_10396#4      ------------------------
consensus_10396#1      ------------------------
consensus_10396#3      ------------------------
consensus_10396#0      TTAATGCTAAAAATATATCAGTGT 1463