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Schistosoma mansoni
cluster # 10415 cluster # 10415       Sequences # 16       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10415#0 length = 1629 sequences # 13  
consensus_10415#1 length = 445 sequences # 2  
consensus_10415#2 length = 209 sequences # 1  

consensusID : consensus_10415#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1629
fasta sequence
                              [TCATGTTNGGACGTTTATGGATTGATAATAGTGGTGAAATGGATATTATAAATCATAATACAGGTGAAAAGTGTCATCTCTCTTACAAACCGTATTCATATTTTTCTAATGACAAACCACGTCGGGTTACAGGTGCTGTACTTGACAAGTCTGGTGATGTACGGTATGTTTTAAATGGTACATGGGATGATTCACTCGAGTATGCACCTGTAGTGAGTACTAGACATTCACGCAATGGAAAACCAGTATTGGAAACTGGACCTGCACGTGTTCTGTGGCAAAGTAATCCTTTACCACCGGATGCAGAACGAATGTATTGTTTCACGCGTTTAGCATTGCAGCTGAACGAACCTGAGGAGGATGTTTGCCCTACTGATTCTCGTCTGCGTCCTGATCAACGTCTTATGGAAGCCGGTCGTTGGGACGAAGCTAACAGGGCGAAAGTAGAACTTGAAGAACTACAGCGCCAACGAAGACGTCAAATGGCTGCCGAGTTAGCCGCACAGTCACTTGCTTCTAGTAAACAGGACGAAACTAGTGACACACACAGTAAATCTGATAGCTCCGTTTCTGAACAATAT-ACAGTCAATCAAGCCCGTCTGTCAGTAACTTTCTCGATATTGNTGATAGCCAGCATAAACCACTATGGTTTACAAAAAGATTCGATCAATTCACAAACAAAGAAACGTATATATTTACTGGAAAATACTGGGAGCACAAATTAATTCATGATTGGTCAATGTGCCCGAAGATCTACTAATCTTCATAAGTGCAGAGGAAAGGGATATACATATTCACCGAATTATTTTTAATTATCTTTTTCTTGCCAGTGAATAACTAAACTAATCGTGATAGATATTATTTGTTTCCGTGTTACAGACACGGGGTTATTCTTGTACTTCTACAACAGTTACAATATCTTGAGTATTATCCATATTCAAGATTAGTATGCACACATTTAGATTTGTAATCTTTTTCCAATAATTCAAAGACATTCTCATCACTGTCTATAATTTTCAAGAAGTTACCCTTTTTCAGAAATACATATTTTTCTTGTGTCCTACTCTGATTTCTGTGAATGATCATGAAACAAATTCGTAGAACCTAGTCTGATGCTTATCGGTACTAACACTTTTCCATCCACGTATACTGTATTAATAACTATTTAGTGTGACTGTAGTTCACTTTTCTCATTTGACTCCATCCAGTTGCATCTGATAGCTATTTACTTCTACTTATTAGCAAAC-AAAATTATTCAGTTGAATCCAAACGTTACTCTAATTTCTTACATCAGGTATACAAACTAAATCCTGCTATTTGATTCAT--GGTTGTTTTTTTCTCCATAAATGTTCTTGATCAGTTATTTGCTTTTGGGAATAAAG-ACATCACATCTGTTTATATTTAATCGGCATGTTCATTCCTATTTTT-CACCTGCNTCTTTTATTGTGTAGCAT-AATTCCTNCTAGTGTTACAGAAGAACTCATTTGTGATANAAACTTTAGTTNCTTAATNTCCTATATGAAATATGTCCACTGGTCTCTTAGATCAATACTNACTATGACTTGGCATGCGGATCTTTCGCTGGTTTGGTAAGACTACTATTACTATCTTCATAACAAAACTTGCTTC]

[-] EMBL CD191191             [TCATGTTNGGACGTTTATGGATTGATAATAGTGGTGAAATGGATATTATAAATCATAATACAGGTGAAAAGTGTCATCTCTCTTACAAACCGTATTCATATTTTTCTAATGACAAACCACGTCGGGTTACAGGTGCTGTACTTGACAAGTCTGGTGATGTACGGTATGTTTTAAATGGTACATGGGATGATTCACTCGAGTATGCACCTGTAGTGAGTACTAGACATTCACGCAATGGAAAACCAGTATTGGAAACTGGACCTGCACGTGTTCTGTGGCAAAGTAATCCTTTACCACCGGATGCAGAACGAATGTATTGTTTCACGCGTTTAGCATTGCAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD190535             [                        ggcttcttaGTGAAATGGATATTATAAATCATAATACAGGTGAAAAGTGTCATCTCTCTTACAAACCGTATTCATATTTTTCTAATGACAAACCACGTCGGGTTACAGGTGCTGTACTTGACAAGTCTGGTGATGTACGGTATGTTTTAAATGGTACATGGGATGATTCACTCGAGTATGCACCTGTAGTGAGTACTAGACATTCACGCAATGGAAAACCAGTATTGGAAACTGGACCTGCACGTGTTCTGTGGCAAAGTGATCCTTTACCACCGGATGCAGAACGAATGTATTGTTTCACGCGTTTAGCATTGCAGCTGAACGAACCTGAGGAGGATGTTTGCCCTACTGATTCTCGTCTGCGTCCTGATCAACGTCTTATGGAAGCCGGTCGTTGGGACGAAGCTAACAGGGCGAAAGTAGAACTTGAAGAACTACAGCGCCAACGAAGACGTCAAATGGCTGCCGAGTTAGCCGCACAGTCACTTGCTTCTAGTAAACAGGACGAAACTAGTGACACACACAGTAAATCTGATAGCTCCGTTTCTGAACAATAT ACAGTCAATCAAGCCCGTCTGTCAGTAACTTTCTCGATATTGNTGATAGCCAGCATAAACCACTATGGTTTACAAAAAGATTCGATCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD191316             [                                                                                                                                                                                                                                        CAATGGAATACCCGTATTGGAAACTGGACCTGCACGTGTTCTGTGGCAAAGTAATCCTTTACCACCGGATGCAGAACGAATGTATTGTTTCACGCGTTTAGCATTGCAGCTGAACGAACCTGAGGAGGATGTTTGCCCTGCTGATTCTCGTCTGCGTCCTGATCAACGTCTTATGGAAGCCGGTCGTTGGGACGAAGCTAACAGGGCGAAAGTAGAACTTGAAGAACTACAGCGCCAACGAAGACGTCAAATGGCTGCCGAGTTAGCCGCACAGTCACTTGCTTCTAGTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD134353             [                                                                                                                                                                                                                                        CAATGGAAAACCAGTATTGGAAACTGGACCTGCACGTGTTCTGTGGCAAAG AATCCTTTACCACCGGATGCAGAACGAATGTATTGTTTCACGCGTTTAGCATTGCAGCTGAACGAACCTGAGGAGGATGTTTGCCCTACTGATTCTCGTCTGCGTCCTGATCAACGTCTTATGGAAGCCGGTCGTTGGGACGAAGCTAACAGGGCGAAAGTAGAACTTTGAGAACTACAGCGCCAACGAAGACGTCAAATGGCTGCCGAGTTAACCGCACAGTCACTTGCTTCTAGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD134193             [                                                                                                                                                                                                                                         AATGGAAAACCAGTATTGGAAACTGGACCTGCACGTGTTCTGTGGCAAAGTAATCCTTTACCACCGAATGCAGAACGAATGTATTGTTTCACGCGTTTAGCATTGCAGCTGAACGAACCTGAGGAGGATGTTTGCCCTACTGATTCTCGTCTGCGTCCTGATCAACGTCTTATGGAAGCCGGTCGTTGGGACGAAGCTAACAGGGCGAAAGTAGAACTTGAAGAACTACAGCGCCAACGAAGACGTCAAATGGCTGCCGAGTTAGCCGCACAGTCACTTGCTTATAGTAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD191229             [                                                                                                                                                                                                                                       canATGGAAAACCAGTATTGGAAACTGGACCTGCACGTGTTCTGTGGCAAAGTAATCCTTTACCACCGGATGCAGAACGAATGTATTGTTTCACGCGTTTAGCATTGCAGCTGAACGAACCTGAGGAGGATGTTTGCCCTGCTGATTCTCGTCTGCGTCCTGATCAACGTCTTATGGAAGCCGGTCGTTGGGACGAAGCTAACAGGGCGAAAGTAGAACTTGAAGAACTACAGCGCCAACGAAGACGTCAAATGGCTGCCGAGTTAGCCGCACAGTCACTTGCTTCTAGTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD066505             [                                                                                                                                                                                                                                                                          CGTGTTCTGTGGCAAAGTAATCCTTTACCACCGGATGCAGAACGAATGTATTGTTTCACGCGTTTAGCATTGCAGCTGAACGAACCTGAGGAGGATGTTTGCCCTACTGATTCTCGTCTGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD067290             [                                                                                                                                                                                                                                                                             GTCCTGTGGCAAAGTAATCCTTTACCACCGGATGCAGAACGAATGTATTGTTTCACGCGTTTAGCATTGCAGCTGAACGAACCTGAGGAGGATGTTTGCCCTACTGATTCTCGTCTGCGTCCTGATCAACGTCTTATGGAAGCCGGTCGTTGGGACGAAGCTAACAGGGCGAAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD187189             [                                                                                                                                                                                                                                                                                                                                                                                           TCGTCTGCGTCCTGATCAACGTCTTATGGAAGCCGGTCGTTGGGACGAAGCTAACAGGGCGAAAGTAGAACTTGAAGAACTACAGCGCCAACGAAGACGTCAAATGGCTGTCGAGTTAGCCGCACAGTCACTTGCTTCTAGTAAACAGGACGAAACTAGTGACACACACAGTAAATCTGATAGCTCCGTTTCTGAACAATATAACAGTCAATCAAGCCCGTCTGTCAGTAACTTTCTCGATATTGTTGATAGCCAGCATAAACCACTATGGTTTACAAGAGAATTCGATCAATTCACAAACAAAGAAACGTATATATTTACTGGAAAATACTGGGAGCACAAATTAATTCATGATTGGTCAATGTGCCCGAAGATCTACTAATCTTCATAAGTGCAGAGGAAAGGGATATACATATTCACCGAATTATTTTTAATTATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD080109             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTGGAAAATACTGGGAGCACAAATTAATTCATGATTGGTCAATGTGCCCGAAGATCTACTAATCTTCATAAGTGCAGAGGAAAGGGATATACATATTCACCGAATTATTTTTAATTATCTTTTTCTTGCCAGTGAATAACTAAACTAATCGTGATAGATATTATTTGTTTCCGTGTTACAGACACGGGGTTATTCTTGTACTTCTACAACAGTTACAATATCTTGAGTATTATCCATATTCAAGATTAGTATGCACACATTTAGATTTGTAATCTTTTTCCAATAATTCAAAGACATTCTCATCACTGTCTATAATTTTCAAGAAGTTACCCTTTTTCAGAAATACATATTTTTCTTGTGTCCTACTCTGATTTCTGTGAATGATCATGAAACAAATTCGTAGAACCTAGTCTGATGCTTATCGGTACTAACACTTTTCCATCCACGTATACTGTATTAATAACTATTTAGTGTGACTGTAGTTCACTTTTCTCATTTGACTCCATCCAGTTGCATCTGATAGCTATTTACTTCTACTTATTAGCAAAC AAAATTATTCAGTTGAATCCAAACGTTACTCTAATTTCTTACATCAGGTATACAAACTAAATCCTGCTATTTGATTCATGGGGTTGTTTTTTTCTCCATAAATGTTCTTGATCAGTTATTTGCTTTTGGGAATAAAG ACATCACATCTGTTTATATTTAATCGGCATGTTCATTCCTATTTTT CACCTGCNTCTTTTATTGTGTAGCAT AATTCCTNCTAGTGTTACAGAAGAACTCATTTGTGATANAAACTTTAGTTNCTTAATNTCCTATATGAAATATGTCCACTGGTCTCTTAGATCAATACTNACTATGACTTGGCATGCGGATCTTTCGCTGGTTTGGTAAGACTACTATTACTATCTTCATAACAAAACTTGCTTC]
[+] EMBL CD197279             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CATGATTGGTCAATGTGCCCGAAGATCTACTAATCTTCATAAGTGCAGAGGAAAGGGATATACATATTCACCGAATTATTTTTAATTATCTTTTTCTTGCCAGTGAATAACTAAACTAATCGTGATAGATATTATTTGTTTCCGTGTTACAGACACGGGGTTATTCTTGTACTTCTACAACAGTTACAATATCTTGAGTATTATCCATATTCAAGATTAGTATGCACACATTTAGATTTGTAATCTTTTTCCAATAATTCAAAGACATTCTCATCACTGTCTATAATTTTCAAGAAGTTACCCTTTTTCAGAAATACATATTTTTCTTGTGTCCTACTCTGATTTCTGTGAATGATCATGAAACAAATTCGTAGAACCTAGTCTGATGCTTATCGGTACTAACACTTTTCCATCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD063133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAAATTCGTAGAACCTAGTCTGGTGCTTATCGGTACTAACACTTTTCCATCCACGTATACTGTATTAATAACTATTTAGTGTGACTGTAGTTCACTTTTCTCATTTGACTCCATCCAGTTGCATCTGATAGCTATTTACTTCTACTTATTAGCAAAC AAAATTATTCAGTTGAATCCAAACGTTACTCTAATTTCTTACATCAGGTATACAAACTAAATCCTGCTATTTGATTCAT  GGTTGTTTTTTTCTCCATAAATGTTCTTGATCAGTTATTTGCTTTTGGGAATAAAGAACATCACATCTGTTTATATTTAATCGGCATGTTCATTCCTATTTTTCCACCTGC TCCTTATTTGTGTAGCATAAATTCCTCCTAGTGTTta                                                                                                                                                             ]
[-] EMBL CD067216             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTTATTAGCAAACAAAAATTATTCAGTTGAATCCAAACGTTACTCTAATTTCTTACATCAGGTATACAAACTAAATCCTGCTATTTGATTCAT  GGTTGTTTTTTTCTCCATAAATGTTCTTGATCAGTTATTTGCTTTTGGGAATAAAGAACATCACATCTGTTTATATTTAATCGG                                                                                                                                                                                                                              ]


>consensus_10415#0 TCATGTTNGGACGTTTATGGATTGATAATAGTGGTGAAATGGATATTATAAATCATAATA CAGGTGAAAAGTGTCATCTCTCTTACAAACCGTATTCATATTTTTCTAATGACAAACCAC GTCGGGTTACAGGTGCTGTACTTGACAAGTCTGGTGATGTACGGTATGTTTTAAATGGTA CATGGGATGATTCACTCGAGTATGCACCTGTAGTGAGTACTAGACATTCACGCAATGGAA AACCAGTATTGGAAACTGGACCTGCACGTGTTCTGTGGCAAAGTAATCCTTTACCACCGG ATGCAGAACGAATGTATTGTTTCACGCGTTTAGCATTGCAGCTGAACGAACCTGAGGAGG ATGTTTGCCCTACTGATTCTCGTCTGCGTCCTGATCAACGTCTTATGGAAGCCGGTCGTT GGGACGAAGCTAACAGGGCGAAAGTAGAACTTGAAGAACTACAGCGCCAACGAAGACGTC AAATGGCTGCCGAGTTAGCCGCACAGTCACTTGCTTCTAGTAAACAGGACGAAACTAGTG ACACACACAGTAAATCTGATAGCTCCGTTTCTGAACAATATACAGTCAATCAAGCCCGTC TGTCAGTAACTTTCTCGATATTGNTGATAGCCAGCATAAACCACTATGGTTTACAAAAAG ATTCGATCAATTCACAAACAAAGAAACGTATATATTTACTGGAAAATACTGGGAGCACAA ATTAATTCATGATTGGTCAATGTGCCCGAAGATCTACTAATCTTCATAAGTGCAGAGGAA AGGGATATACATATTCACCGAATTATTTTTAATTATCTTTTTCTTGCCAGTGAATAACTA AACTAATCGTGATAGATATTATTTGTTTCCGTGTTACAGACACGGGGTTATTCTTGTACT TCTACAACAGTTACAATATCTTGAGTATTATCCATATTCAAGATTAGTATGCACACATTT AGATTTGTAATCTTTTTCCAATAATTCAAAGACATTCTCATCACTGTCTATAATTTTCAA GAAGTTACCCTTTTTCAGAAATACATATTTTTCTTGTGTCCTACTCTGATTTCTGTGAAT GATCATGAAACAAATTCGTAGAACCTAGTCTGATGCTTATCGGTACTAACACTTTTCCAT CCACGTATACTGTATTAATAACTATTTAGTGTGACTGTAGTTCACTTTTCTCATTTGACT CCATCCAGTTGCATCTGATAGCTATTTACTTCTACTTATTAGCAAACAAAATTATTCAGT TGAATCCAAACGTTACTCTAATTTCTTACATCAGGTATACAAACTAAATCCTGCTATTTG ATTCATGGTTGTTTTTTTCTCCATAAATGTTCTTGATCAGTTATTTGCTTTTGGGAATAA AGACATCACATCTGTTTATATTTAATCGGCATGTTCATTCCTATTTTTCACCTGCNTCTT TTATTGTGTAGCATAATTCCTNCTAGTGTTACAGAAGAACTCATTTGTGATANAAACTTT AGTTNCTTAATNTCCTATATGAAATATGTCCACTGGTCTCTTAGATCAATACTNACTATG ACTTGGCATGCGGATCTTTCGCTGGTTTGGTAAGACTACTATTACTATCTTCATAACAAA ACTTGCTTC



consensusID : consensus_10415#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 445
fasta sequence
                              [AGTCCCTTTTTCATTTGACTCCATCCAGTTGCATCTGAAAGCTATTTACTTCTACTTTTTACCAAACAAAATATTCAGTTGAATCCAAACGTTACTCTAATTTCTTACATCAGGTATACAAACTAAATCCTGCTATTTGATTCATGGTTGTTTTTTTCTCCATAAATGTTCTTGATCAGTTATTTGCTTTTGGGAATAAAGAACATCACATCTGTTTATATTTAATCGGCATGTTCATTCCTATTTTTCCACCTGCTCCTTATTTGTGTAGCATAAATTCCTCCTAGTGTTTACAGAAGACACTCATTTTGTGATTAAAATCTTTCAGTTTCTTTAATTTTCCCTATACTGAATATTATGTTCTACTTGTTTCTCTCTATGATTCAATTTAACTAGAGCTAATGAACTTTGTGCATTGAAAAAAAAAAAAAAAAAATAAAAAAAA]

[-] EMBL AI395091             [AGTCCCTTTTTCATTTGACTCCATCCAGTTGCATCTGAAAGCTATTTACTTCTACTTTTTACCAAACAAAATATTCAGTTGAATCCAAACGTTACTCTAATTTCTTACATCAGGTATACAAACTAAATCCTGCTATTTGATTCATGGTTGTTTTTTTCTCCATAAATGTTCTTGATCAGTTATTTGCTTTTGGGAATAAAGAACATCACATCTGTTTATATTTAATCGGCATGTTCATTCCTATTTTTCCACCTGCTCCTTATTTGTGTAGCATAAATTCCTCCTAGTGTTTACAGAAGACACTCATTTTGTGATTAAAATCTTTCAGTTTCTTTAATTTTCCCTATACTGAATATTATGTTCTACTTGTTTCTCTCTATGATTCAATTTAACTAGAGCTAATGAACTTTGTGCATTGAAAAAAAAAAAAAAAAAATA       ]
[-] EMBL AI395129             [                                                                                                               AGGTATAC AACTTAAACCTGCTATTTGATTCATGGTT TTTTTTTCCCCATAAATGTTCTTGATCAGTTATTTGCTTTTGGGAATAAAGAACATCACATCTGTTTATATTTAATCGGCATGTTCATTCCTATTTTTCCACCTGCTCCTTATTTGTGTAGCATAAATTCCTCCTAGTGTTTACAGAAGACACTCATTTTGTGATTAAAATCTTTCAGTTTCTTTAATTTTCCCTATATTGAATATTATGTTCTACTTGTTTCTCTCTATGATTCAATTTAACTAGAGCTAATGAACTTTGTGCATTGAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10415#1 AGTCCCTTTTTCATTTGACTCCATCCAGTTGCATCTGAAAGCTATTTACTTCTACTTTTT ACCAAACAAAATATTCAGTTGAATCCAAACGTTACTCTAATTTCTTACATCAGGTATACA AACTAAATCCTGCTATTTGATTCATGGTTGTTTTTTTCTCCATAAATGTTCTTGATCAGT TATTTGCTTTTGGGAATAAAGAACATCACATCTGTTTATATTTAATCGGCATGTTCATTC CTATTTTTCCACCTGCTCCTTATTTGTGTAGCATAAATTCCTCCTAGTGTTTACAGAAGA CACTCATTTTGTGATTAAAATCTTTCAGTTTCTTTAATTTTCCCTATACTGAATATTATG TTCTACTTGTTTCTCTCTATGATTCAATTTAACTAGAGCTAATGAACTTTGTGCATTGAA AAAAAAAAAAAAAAAATAAAAAAAA



consensusID : consensus_10415#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 209
fasta sequence
                              [ATGTTTTTTTTTTGTTTTATTGAAAAAGAATTATGTAAATAGCTAAGTTCATTATAACAGAAACACAGCGAGAAAGATCACGTCAATGCACAAAGTTCATTAGCTCTAGTTAAATTGAATCATAGAGAGAAACAAGTAGAACATAATATTCAATATAGGGAAATTTAAAGAAACTGAAAGATTTTAATCACAAAATGAGTGTCTTCTGT]

[+] EMBL AI026222             [ATGTTTTTTTTTTGTTTTATTGAAAAAGAATTATGTAAATAGCTAAGTTCATTATAACAGAAACACAGCGAGAAAGATCACGTCAATGCACAAAGTTCATTAGCTCTAGTTAAATTGAATCATAGAGAGAAACAAGTAGAACATAATATTCAATATAGGGAAATTTAAAGAAACTGAAAGATTTTAATCACAAAATGAGTGTCTTCTGT]


>consensus_10415#2 ATGTTTTTTTTTTGTTTTATTGAAAAAGAATTATGTAAATAGCTAAGTTCATTATAACAG AAACACAGCGAGAAAGATCACGTCAATGCACAAAGTTCATTAGCTCTAGTTAAATTGAAT CATAGAGAGAAACAAGTAGAACATAATATTCAATATAGGGAAATTTAAAGAAACTGAAAG ATTTTAATCACAAAATGAGTGTCTTCTGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10415#0      TCATGTTNGGACGTTTATGGATTGATAATAGTGGTGAAATGGATATTATAAATCATAATA 60
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      CAGGTGAAAAGTGTCATCTCTCTTACAAACCGTATTCATATTTTTCTAATGACAAACCAC 120
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      GTCGGGTTACAGGTGCTGTACTTGACAAGTCTGGTGATGTACGGTATGTTTTAAATGGTA 180
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      CATGGGATGATTCACTCGAGTATGCACCTGTAGTGAGTACTAGACATTCACGCAATGGAA 240
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      AACCAGTATTGGAAACTGGACCTGCACGTGTTCTGTGGCAAAGTAATCCTTTACCACCGG 300
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      ATGCAGAACGAATGTATTGTTTCACGCGTTTAGCATTGCAGCTGAACGAACCTGAGGAGG 360
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      ATGTTTGCCCTACTGATTCTCGTCTGCGTCCTGATCAACGTCTTATGGAAGCCGGTCGTT 420
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      GGGACGAAGCTAACAGGGCGAAAGTAGAACTTGAAGAACTACAGCGCCAACGAAGACGTC 480
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      AAATGGCTGCCGAGTTAGCCGCACAGTCACTTGCTTCTAGTAAACAGGACGAAACTAGTG 540
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      ACACACACAGTAAATCTGATAGCTCCGTTTCTGAACAATATACAGTCAATCAAGCCCGTC 600
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      TGTCAGTAACTTTCTCGATATTGNTGATAGCCAGCATAAACCACTATGGTTTACAAAAAG 660
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      ATTCGATCAATTCACAAACAAAGAAACGTATATATTTACTGGAAAATACTGGGAGCACAA 720
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      ATTAATTCATGATTGGTCAATGTGCCCGAAGATCTACTAATCTTCATAAGTGCAGAGGAA 780
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      AGGGATATACATATTCACCGAATTATTTTTAATTATCTTTTTCTTGCCAGTGAATAACTA 840
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      AACTAATCGTGATAGATATTATTTGTTTCCGTGTTACAGACACGGGGTTATTCTTGTACT 900
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      TCTACAACAGTTACAATATCTTGAGTATTATCCATATTCAAGATTAGTATGCACACATTT 960
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      AGATTTGTAATCTTTTTCCAATAATTCAAAGACATTCTCATCACTGTCTATAATTTTCAA 1020
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      GAAGTTACCCTTTTTCAGAAATACATATTTTTCTTGTGTCCTACTCTGATTTCTGTGAAT 1080
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      GATCATGAAACAAATTCGTAGAACCTAGTCTGATGCTTATCGGTACTAACACTTTTCCAT 1140
consensus_10415#1      ------------------------------------------------------------
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      CCACGTATACTGTATTAATAACTATTTAGTGTGACTGTAGTTCACTTTTCTCATTTGACT 1200
consensus_10415#1      --------------------------------------AGTCC--CTTTTTCATTTGACT 20
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      CCATCCAGTTGCATCTGATAGCTATTTACTTCTACTTATTAGCAAACAAAATTATTCAGT 1260
consensus_10415#1      CCATCCAGTTGCATCTGAAAGCTATTTACTTCTACTTTTTACCAAACAAAAT-ATTCAGT 79
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      TGAATCCAAACGTTACTCTAATTTCTTACATCAGGTATACAAACTAAATCCTGCTATTTG 1320
consensus_10415#1      TGAATCCAAACGTTACTCTAATTTCTTACATCAGGTATACAAACTAAATCCTGCTATTTG 139
consensus_10415#2      ---------------------------------------------------------ATG 3
                                                                                 **

consensus_10415#0      ATTCATGGTTGTTTTTTTCTCCATAAATGTTCTTGATCAGTTATTTGCTTTTGGGAATAA 1380
consensus_10415#1      ATTCATGGTTGTTTTTTTCTCCATAAATGTTCTTGATCAGTTATTTGCTTTTGGGAATAA 199
consensus_10415#2      TTTTTTTTTTGTTTTATTGAAAAAGAAT-TATGTAAATAGCTAAGTTCATTATAACAGAA 62
                        **  *  ******* **    *  *** *   * *  ** **  * * **     * **

consensus_10415#0      AGA-CATCACATCTGTTTATATTTAATCGGCATGTTCATTCCTATTTTTC-ACCTGCNTC 1438
consensus_10415#1      AGAACATCACATCTGTTTATATTTAATCGGCATGTTCATTCCTATTTTTCCACCTGCTCC 259
consensus_10415#2      ACA-CAGCGAGAAAGATCACGTCAATGCACAAAGTTCATTAGCTCTAGTTAAATTGAATC 121
                       * * ** *      * * *  *  *  *   * *******     *  *  *  **   *

consensus_10415#0      TTTTATTGTGTAGCATAA-TTCCTNCTAGTGTT-ACAGAAGA-ACTCATTT-GTGATANA 1494
consensus_10415#1      TTAT-TTGTGTAGCATAAATTCCTCCTAGTGTTTACAGAAGACACTCATTTTGTGATTAA 318
consensus_10415#2      ATA----GAGAGAAACAAGTAGAACATAATATTCAATATAGGGAAATTTAAAGAAACTGA 177
                        *     * *    * ** *      ** * ** *    **  *    *   *  *   *

consensus_10415#0      AACTTT--AGTTNCTTAA----TNTCCTATATGAAATAT-GTCCACTGGTCTCTTAGATC 1547
consensus_10415#1      AATCTTTCAGTTTCTTTAATT-TTCCCTATACTGAATATTATGTTCTACTTGTTTCTCTC 377
consensus_10415#2      AAGATTTTAATCACAAAATGAGTGTCTTCTGT---------------------------- 209
                       **  **  * *  *   *    *  * * *                              

consensus_10415#0      AAT-ACTNACTATGACTTGGCATGCGGATCTTTCGCTGGTTTGGTAAGACTACTATTACT 1606
consensus_10415#1      TATGATTCAATTTAACTAGAGCTAATGAACTTT--GTGCATTGAAAAAAAAAAAAAAAAA 435
consensus_10415#2      ------------------------------------------------------------
                                                                                   

consensus_10415#0      ATCTTCATAACAAAACTTGCTTC 1629
consensus_10415#1      AT----AAAAAAAA--------- 445
consensus_10415#2      -----------------------
                                              




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)