cluster # 10417

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Schistosoma mansoni
cluster # 10417 cluster # 10417 Sequences # 16 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10417#0 length = 1573 sequences # 8
consensus_10417#1 length = 1072 sequences # 6

consensus_10417#2 length = 242 sequences # 1
consensus_10417#3 length = 131 sequences # 1

consensusID : consensus_10417#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1573
fasta sequence

                              [GTTTGCGCAACAGCGATGGATATGGCCAATCCTCTTACTTCTGTCATGGATTTGATGCGACGTCTACCGCCTCAAAAAATCAATCATACTTTGGTGGATGTAATCTCGCTTAAACCAGAACACTGTGAAGATATTTTAAGCTCAGTGGATCAACCTTTAAAGATCGCGAGAGATGTCCATGCTGATCGTGATTATTTATTATGCGATTATAACAGAGATGGTGATTCTTATCGATCACCTTGGTCAAATACCTACGACCCACCACTAGAAGATGGAGCTATGCCAAGTGAAAGTCTTCGTAAACGAGAAATAGAAATTAATACAGCTTTTGATCAATACAGAGAAATGAAAGGCCTTCTGCTAAAATATCCTTATATAAGCTTACAAGTACAGTTATGCTATGGCTTCAAACCCAACGAGAATCTGCAGGTTATTTCAATCTTGGTGGTAGTCTTTCAAGATTCAGTGAGCGTGAACTTCCTTTGGGAGACTCANGTGTTCCAATAACTACTTCACATATTGTTAATATTGGCCGTATGGTAGAAGATGTTGAAAACTCAATCCGCTCAACGCTCAATGAAGTATATTTCGGTACAACAAAAAATATTGTTGATTCATTACGTTCTATCGTACCTGCCTCAGAAGAGGAAAAACGTCGGCGTTTAGTTCAAGAAGTACACACAGCCTTACAAAATAAGTCCCAGTTATAGATACTCTTCATTTCATCACATTTAGCTCTAATATGCGCTAATAACTTTTTGATTTTTTCTCCTAAACACCGAATATTTCAAGAATGCTCAGTATTTCTTTCAAATGATTACTATTCCCCTTTTATGTGTTATTCAGTTGTGTGGTTTTTATCTGTGGTATTCGTAAACTTCAGCGTATCTGGGACTTACAAAACTTTTTCGATTCTTAGAAAAACTTCACGTCGGTCGTTCTCTTATATGTCGCTTTTTTATAATATCATTCCTGTTAACAATATTTTTTGAAGTCAACTTTGAAGATAACCTTGAATACGTGTATTTCATAATTCTACTTTAGTATTTTCACTATGCAAAACAGAATCATCGCTGGCCCTCTCTTTTGTTAACGATGGTTATGGTAACCTGTTTTTAAAACTATTATTATTGATTACTCTCCCCCTATCCACAACCACATTGGCCAATTATTGTACAAATGTTATTTTTCTATTTTTTGGTATAATGTGGTCTGTTTGGTTAGTATATAAACCCAGTATGTTTGTGAATAATGATTCGTATTGCCGAGGCTGTTATTGGTGTTCTGGACTTAACTGGCTGGGCTAGACAGAAAGCAGGGCCGATACGCGCTCAAGACTGCTCTTACGATTTCGTGCATCATTGGGCGATCAATAAATTCACTGCTTTCTTATTGGGCGTCCATATATCAAATAGGGCACACGCACGCACGTACTTACACGATATAACACTCTCTAAAAGGCTCATGATAAGAATAAACATTTATAAATCTATTGATATTCTAGTGGCTACTGATAACACGCTGAAATCACTGATAAAATAGATAGTTTTCCACTCAGGATAAAACACAACAT]

[+] EMBL CD185907             [GTTTGCGCAACAGCGATGGATATGGCCAATCCTCTTACTTCTGTCATGGATTTGATGCGACGTCTACCGCCTCAAAAAATCAATCATACTTTGGTGGATGTAATCTCGCTTAAACCAGAACACTGTGAAGATATTTTAAGCTCAGTGGATCAACCTTTAAAGATCGCGAGAGATGTCCATGCTGATCGTGATTATTTATTATGCGATTATAACAGAGATGGTGATTCTTATCGATCACCTTGGTCAAATACCTACGACCCACCACTAGAAGATGGAGCTATGCCAAGTGAAAGTCTTCGTAAACGAGAAATAGAAATTAATACAGCTTTTGATCAATACAGAGAAATGAAAGGCCTTCTGCTAAAATATCCTTATATAAGCTTACAAGTACAGTTATGCTATGGCTTCAAACCCAACGAGAATCTGCAGGTTATTTCAATCTTGGTGGTAGTCTTTCAAGATTCAGTGAGCGTGAACTTCCTTTGGGAGACTCANGTGTTCCAATAACTACTTCACATATTGTTAATATTGGCCGTATGGTAGAAGATGTTGAAAACTCAATCCGCTCAACGCTCAATGAAGTATATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD073117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TACTTCACATATTGTTAATATTGGCCGTATGGTAGAAGATGTTGAAAACTCAATCCGCTCAACGCTCAATGAAGTATATTTCGGTACAACAAAAAATATTGTTGATTCATTACGTTCTATCGTACCTGCCTCAGAAGAGGAAAAACGTCGGCGTTTAGTTCAAGAAGTACACACAGCCTTACAAAATAAGTCCCAGTTATAGATACTCTTCATTTCATCACATTTAGCTCTAATATGCGCTAATAACTTTTTGATTTTTTCTCCTAAACACCGAATATTTCAAGAATGCTCAGTATTTCTTTCAAATGATTACTATTCCCCTTTTATGTGTTATTCAGTTGTGTGGTTTTTATCTGTGGTATTCGTAAACTTCAGCGTATCTGGGACTTACAAAACTTTTTCGATTCTTAGAAAAACTTCACGTCGGTCGTTCTCTTATATGTCGCTTTTTTATAATATCATTCCTGTTAACAATATTTTTTGAAGTCAACTTTGAAGATAACCTTGAATACGTGTATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD143537             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACTTCACATATTGTTAATATTGGCCGTATGGTAGAAGATGTTGAAAACTCAATCCGCTCAACGCTCAATGAAGTATATTTCGGTACAACAAAAAATATTGTTGATTCATTACGTTCTATCGTACCTGCCCCAGATGAGGAAAAACGTCGGCGTTTAGTTCAAGAAGTACACACAGCCTTACAAAATAAGTCCCAGTTATAGATACTCTTCATTTCATCACATTTAGCTCTAATATGCGCTAATAACTTTTTGATTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD141544             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGCGTTTAGTTCAAGAAGTACACACAGCCTTACAAAATAAGTCCCAGTTATAGATACTCTTCATTTCATCACATTTAGCTCTAATATGCGCTAATAACTTTTTGATTTTTTCTCCTAAACACCGAATATTTCAAGAATGCTCAGTATTTCTTTCAAATGATTACTATTCCCCTTTTATGTGTTATTCAGTTGTGTGGTTTTTATCTGTGGTATTCGTAAACTTCAGCGTATCTGGGACTTACAAAACTTTTTCGATTCTTAG AAAACTTCACGTCGGTCGTTCTCTTATATGTCGCTTTTTTATAATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD158679             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CATTTCATCACATTTAGCTCTAATATGCGCTAATAACTTTTTGATTTTTTCTCCTAAACACCGAATATTTCAAGAATGCTCAGTATTTCTTTCAAATGATTACTATTCCCCTTTTATGTGTTATTCAGTTGTGTGGTTTTTATCTGTGGTATTCGTAAACTTCAGCGTATCTGGGACTTACAAAACTTTTTCGATTCTTAGAAAAACTTCACGTCGGTCGTTCTCTTATATGTCGCTTTTTTATAATATCATTCCTGTTAACAATATTTTTTGAAGTCAACTTTGAAGATAACCTTGAATACGTGTATTTCATAATTCTACTTTAGTATTTTCACTATGCAAAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD148739             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGCTCTAATATGCGCTAATAACTTTTTGATTTTTTCTCCTAAACACCGAATATTTCAAGAATGCTCAGTATTTCTTTCAAATGATTACTATTCCCCTTTTATGTGTTATTCAGTTGTGTGGTTTTTATCTGTGGTATTCGTAAACTTCAGCGTATCTGGGACTTACAAAACTTTTTCGATTCTTAGAAAAACTTCACGTCGGTCGTTCTCTTATATGTCGCTTTTTTATAATATCATTCCTGTTAACAATATTTTTTGAAGTCAACTTTGAAGATAACCTTGAATACGTGTATTTCATAATTCTACTTTAGTATTTTCACTATGCAAAACAGAATCATCGCTGGCCCTCTCTTTTGTTAACGATGGTTATGGTAACCTGTTTTTAAAACTATTATTATTGATTACTCTCCCCCTATCCACAACCACATTGGCCAATTATTGTACAAATGTTATTTTTCTATTTTTTGGTATAATGTGGTCTGTTTGGTTA                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD124795             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGTGTTATTCAGTTGTGTGGTTTTTATCTGTGGTATTCGTAAACTTCAGGGTATCTGGGACTTACAAAACTTTTTCGATTCTTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD112660             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAATTATTGTACAAATGTTA TTTTCTATTTTTTGGTACGATGTGGTCTGTTTGGTTTGTATATAAACCCAGTATGTTTGTGAATAATGATTCGTATTGCCGAGGCTGTTATTGGTGTTCTGGACTTAACTGGCTGGGCTAGACAGAAAGCAGGGCCGATACGCGCTCAAGACTGCTCTTACGATTTCGTGCATCATTGGGCGATCAATAAATTCACTGCTTTCTTATTGGGCGTCCATATATCAAATAGGGCACACGCACGCACGTACTTACACGATATAACACTCTCTAAAAGGCTCATGATAAGAATAAACATTTATAAATCTATTGATATTCTAGTGGCTACTGATAACACGCTGAAATCACTGATAAAATAGATAGTTTTCCACTCAGGATAAAACACAACAT]




>consensus_10417#0
GTTTGCGCAACAGCGATGGATATGGCCAATCCTCTTACTTCTGTCATGGATTTGATGCGA
CGTCTACCGCCTCAAAAAATCAATCATACTTTGGTGGATGTAATCTCGCTTAAACCAGAA
CACTGTGAAGATATTTTAAGCTCAGTGGATCAACCTTTAAAGATCGCGAGAGATGTCCAT
GCTGATCGTGATTATTTATTATGCGATTATAACAGAGATGGTGATTCTTATCGATCACCT
TGGTCAAATACCTACGACCCACCACTAGAAGATGGAGCTATGCCAAGTGAAAGTCTTCGT
AAACGAGAAATAGAAATTAATACAGCTTTTGATCAATACAGAGAAATGAAAGGCCTTCTG
CTAAAATATCCTTATATAAGCTTACAAGTACAGTTATGCTATGGCTTCAAACCCAACGAG
AATCTGCAGGTTATTTCAATCTTGGTGGTAGTCTTTCAAGATTCAGTGAGCGTGAACTTC
CTTTGGGAGACTCANGTGTTCCAATAACTACTTCACATATTGTTAATATTGGCCGTATGG
TAGAAGATGTTGAAAACTCAATCCGCTCAACGCTCAATGAAGTATATTTCGGTACAACAA
AAAATATTGTTGATTCATTACGTTCTATCGTACCTGCCTCAGAAGAGGAAAAACGTCGGC
GTTTAGTTCAAGAAGTACACACAGCCTTACAAAATAAGTCCCAGTTATAGATACTCTTCA
TTTCATCACATTTAGCTCTAATATGCGCTAATAACTTTTTGATTTTTTCTCCTAAACACC
GAATATTTCAAGAATGCTCAGTATTTCTTTCAAATGATTACTATTCCCCTTTTATGTGTT
ATTCAGTTGTGTGGTTTTTATCTGTGGTATTCGTAAACTTCAGCGTATCTGGGACTTACA
AAACTTTTTCGATTCTTAGAAAAACTTCACGTCGGTCGTTCTCTTATATGTCGCTTTTTT
ATAATATCATTCCTGTTAACAATATTTTTTGAAGTCAACTTTGAAGATAACCTTGAATAC
GTGTATTTCATAATTCTACTTTAGTATTTTCACTATGCAAAACAGAATCATCGCTGGCCC
TCTCTTTTGTTAACGATGGTTATGGTAACCTGTTTTTAAAACTATTATTATTGATTACTC
TCCCCCTATCCACAACCACATTGGCCAATTATTGTACAAATGTTATTTTTCTATTTTTTG
GTATAATGTGGTCTGTTTGGTTAGTATATAAACCCAGTATGTTTGTGAATAATGATTCGT
ATTGCCGAGGCTGTTATTGGTGTTCTGGACTTAACTGGCTGGGCTAGACAGAAAGCAGGG
CCGATACGCGCTCAAGACTGCTCTTACGATTTCGTGCATCATTGGGCGATCAATAAATTC
ACTGCTTTCTTATTGGGCGTCCATATATCAAATAGGGCACACGCACGCACGTACTTACAC
GATATAACACTCTCTAAAAGGCTCATGATAAGAATAAACATTTATAAATCTATTGATATT
CTAGTGGCTACTGATAACACGCTGAAATCACTGATAAAATAGATAGTTTTCCACTCAGGA
TAAAACACAACAT

consensusID : consensus_10417#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1072
fasta sequence

                              [TTCAATGGAAAGATGGAATCAAAGATATTGTTTCGAAACTTTCAAAAGCAGAGGTCTCCTGCAGCTACTTAATCGACATTCTAAAATTTATTCCTGAAGGGATGAACAGCAGTACTCTTCGACTGGGGATGAATCGTCGACACGCTCTTATGAGTCAGTTTGAAGGGAGTAAACAGTTTGTGTTGGAGTTTCTGTCTCACAGAGCAAAATCAGAACAAATGGTTATCTTAGCTAAAGTATATAATTGTCTTGCAAGTTGGTGGGATAATACTGGGATCATGGTTGAACACGATGTACCTATTGACCCTCTCTTGAACACTGCATTTGCTATCCTTCGGAATCCCTCCACTACTCCTGAATCAACTTTCGATGCCGCCTCTCAGTGGGTGCTAGCACTTTTATACCAGTGTAAGCAGCTTAGCAACTCAAACAGTGAATTACTGCGTTGGCTTCAAGAAAATATTTACAGTCTAGTTAGTATTGTGCAGGAATGTTCCAATTCTGTCGCGTCTGCTTTAGGATCAATTCAACAACAAGAACAGCTTGAACTGTACAAAGATCGATGTACGTGTTTGGCTCACATTTTCTCGTCACTAGCCAGAACTTTACGGCCTCCTCTAGTAGATCAACCCACTAGCCCTGGATCTGGTGGTTTTGGAGATTTGCGTACTATGGAGTGTATTCTCGTAGTTCTTGAAATACCTCCTCCTCTTGGTAGTCGTGAATTGGCATCTATTACATTCCACGCCTTGCATTCGTTGGCTGATGATGCGATTCGACACCGGTCCATGAGTGCTGCAGTATCTGTGAATCAGGGCCCCTTGGAATCTTCGGTTAACAGCTCTAATGCTTCTACTGGCGTGACACGCCCAGTTGCAGCCTTAATTCCTTACTTTACTCGTGTTGTGGTTGCGTTAACCAGTTACTGTCCTAGTAATACATCCGATTTAGAAAGCACCGATGAATTGAGAGATTTTCGTGAGGATGTTCATGATCTCATGCAAGATATTCTGGGTTTGGTTGGAGCTGAGGCTATTTTTGTCGAGCTATACAATTATGTTCAGAAGCTGCA]

[+] EMBL CD154588             [TTCAATGGAAAGATGGAATCAAAGATATTGTTTCGAAACTTTCAAAAGCAGAGGTCTCCTGCAGCTACTTAATCGACATTCTAAAATTTATTCCTGAAGGGATGAACAGCAGTACTCTTCGACTGGGGATGAATCGTCGACACGCTCTTATGAGTCAGTTTGAAGGGAGTAAACAGTTTGTGTTGGAGTTTCTGTCTCACAGAGCAAAATCAGAACAAATGGTTATCTTAGCTAAAGTATATAATTGTCTTGCAAGTTGGTGGGATAATACTGGGATCATGGTTGAACACGATGTACCTATTGACCCTCTCTTGAACACTGCATTTGCTATCCTTCGGAATCCCTCCACTACTCCTGAATCAACTTTCGATGCCGCCTCTCAGTGGGTGCTAGCACTTTTATACCAGTGTAAGCAACTTAGCAACTCANACAGTGAATTACTGCGTTGGCTTCAAGAAAATATTTACAGTCTAGTTAGTATTGTGCAGGAATGTTCCAATTCTGTCGCGTCTGCTTTAGGATCAATTCAACAACCAGAACAGCTTGAACTGTANCAAGATCGATGTACGTGTTTGGCTCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD155863             [                                                                                                                                                                                   GTGTTGGAGTTTCTGTCTCACAGAGCAAAATCAGAACAAATGGTTATCTTAGCTAAAGTATATAATTGTCTTGCAAGTTGGTGGGATAATACTGGGATCATGGTTGAACACGATGTACCTATTGACCCTCTCTTGAACACTGCATTTGCTATCCTTCGGAATCCCTCCACTACTCCTGAATCAACTTTCGATGCCGCCTCTCAGTGGGTGCTAGCACTTTTATACCAGTGTAAGCAGCTTAGCAACTCAAACAATGAATTACTGCGTTGGCTTCAAGAAAATATTTACAGTCTTGTTAGTATTGTGCAGGAATGTTCCAATTCTGTCGCGTCTGCTTTAGGATCAATTCAACAACAAGAACAGCTTGAACTGTACAAAGATCGATGTACGTGTTTGGCTCACATTTTCTCGTCACTAGCCAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD155841             [                                                                                                                                                                                   GTGTTGGAGTTTCTGTCTCACAGAGCAAAATCAGAACAAATGGTTATCTTAGCTAAAGTATATAATTGTCTTGCAAGTTGGTGGGATAATACTGGGATCATGGTTGAACACGATGTACCTATTGACCCTCTCTTGAACACTGCATTTGCTATCCTTCGGAATCCCTCCACTACTCCTGAATCAACTTTCGATGCCGCCTCTCAGTGGGTGCTAGCACTTTTATACCAGTGTAAGCAGCTTAGCAACTCAAACAATGAATTACTGCGTTGGCTTCAAGAAAATATTTACAGTCTTGTTAGTATTGTGCAGGAATGTTCCAATTCTGTCGCGTCTGCTTTAGGATCAATTCAACAACAAGAACAGCTTGAACTGTACAAAGATCGATGTACGTGTTTGGCTCACATTTTCTCGTCACTAGCCAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD126681             [                                                                                                                                                                                                                                                                                                                                                                                                                                     CAACACAAACAGTGAATTACTGCGTGGGC TCAAGAAAATATTTACAGTCTAGTTAGTA TGTGCAGGAATGTTCCAATTCTGTCGCGTCTGCTTTAGGATCAATTCAACAACAAGAACAGCTTGAACTGTACAAAGATCGATGTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD154654             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AACAACAAGAACAGCTTGAACTGTACAAAGATCGATGTACGTGTTTGGCTCACATTTTCTCGTCACTAGCCAGAACTTTACGGCCTCCTCTAGTAGATCAACCCACTAGCCCTGGATCTGGTGGTTTTGGAGATTTGCGTACTATGGAGTGTATTCTCGTAGTTCTTGAAATACCTCCTCCTCTTGGTAGTCGTGAATTGGCATCTATTACATTCCACGCCTTGCATTCGTTGGCTGATGATGCGATTCGACACCGGTCCATGAGTGCTGCAGTATCTGTGAATCAGGGCCCCTTGGAATCTTCGGTTAACAGCTCTAATGCTTCTACTGGCGTGACACGCCCAGTTGCAGCCTTAATTCCTTACTTTACTCGTGTTGTGGTTGCGTTAACCAGTTACTGTCCTAGTAATACATCCGATTTAGAAAGCACCGATGAATTGAGAGATTTTCGTGAGGATGTTCATGATCTCATGCAAGATATTCTGGGTTTGGTTGGAGCTGAGGCTATTTTTGTCGAGCTATACAATTATGTTCAGAAGCTGCA]
[+] EMBL CD182173             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AACAAGAACAGCTTGAACTGTACAAAGATCGATGTACGTGTTTGGCTCACATTTTCTCGTCACTAGCCAGAACTTTACGGCCTCCTCTAGTAGATCAACCCACTAGCCCTGGATCTGGTGGTTTTGGAGATTTGCGTACTATGGAGTGTATTCTCGTAGTTCTTGAAATACCTCCTCCTCTTGGTAGTCGTGAATTGGCATCTATTACATTCCACGCCTTACATTCGTTGGCTGATGATGCGATTCGACACCGGTCCATGAGTGCTGCA                                                                                                                                                                                                                                                                                ]




>consensus_10417#1
TTCAATGGAAAGATGGAATCAAAGATATTGTTTCGAAACTTTCAAAAGCAGAGGTCTCCT
GCAGCTACTTAATCGACATTCTAAAATTTATTCCTGAAGGGATGAACAGCAGTACTCTTC
GACTGGGGATGAATCGTCGACACGCTCTTATGAGTCAGTTTGAAGGGAGTAAACAGTTTG
TGTTGGAGTTTCTGTCTCACAGAGCAAAATCAGAACAAATGGTTATCTTAGCTAAAGTAT
ATAATTGTCTTGCAAGTTGGTGGGATAATACTGGGATCATGGTTGAACACGATGTACCTA
TTGACCCTCTCTTGAACACTGCATTTGCTATCCTTCGGAATCCCTCCACTACTCCTGAAT
CAACTTTCGATGCCGCCTCTCAGTGGGTGCTAGCACTTTTATACCAGTGTAAGCAGCTTA
GCAACTCAAACAGTGAATTACTGCGTTGGCTTCAAGAAAATATTTACAGTCTAGTTAGTA
TTGTGCAGGAATGTTCCAATTCTGTCGCGTCTGCTTTAGGATCAATTCAACAACAAGAAC
AGCTTGAACTGTACAAAGATCGATGTACGTGTTTGGCTCACATTTTCTCGTCACTAGCCA
GAACTTTACGGCCTCCTCTAGTAGATCAACCCACTAGCCCTGGATCTGGTGGTTTTGGAG
ATTTGCGTACTATGGAGTGTATTCTCGTAGTTCTTGAAATACCTCCTCCTCTTGGTAGTC
GTGAATTGGCATCTATTACATTCCACGCCTTGCATTCGTTGGCTGATGATGCGATTCGAC
ACCGGTCCATGAGTGCTGCAGTATCTGTGAATCAGGGCCCCTTGGAATCTTCGGTTAACA
GCTCTAATGCTTCTACTGGCGTGACACGCCCAGTTGCAGCCTTAATTCCTTACTTTACTC
GTGTTGTGGTTGCGTTAACCAGTTACTGTCCTAGTAATACATCCGATTTAGAAAGCACCG
ATGAATTGAGAGATTTTCGTGAGGATGTTCATGATCTCATGCAAGATATTCTGGGTTTGG
TTGGAGCTGAGGCTATTTTTGTCGAGCTATACAATTATGTTCAGAAGCTGCA

consensusID : consensus_10417#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 242
fasta sequence

                              [TGATCCTAAAGCAGACGCGACAGAATTGGAACATTACTGCACAATACTAACTAGACTGTCAATATTTTCTTGAAGCCCACGCAGTAATTCACTGATTGAGTTGCTAAGTTGCTTACACTGGTATAAAAGAGCTAACACCCACTGTGAGGCGGCATCTAAAGTAGATTCAGGAGTAGAGGAGGGATTCCGAAAGATCGCAAATGCCGTGTTCAATAGAGGGTGAACAGGAACATCGTGTTCAA]

[+] EMBL CD187640             [TGATCCTAAAGCAGACGCGACAGAATTGGAACATTACTGCACAATACTAACTAGACTGTCAATATTTTCTTGAAGCCCACGCAGTAATTCACTGATTGAGTTGCTAAGTTGCTTACACTGGTATAAAAGAGCTAACACCCACTGTGAGGCGGCATCTAAAGTAGATTCAGGAGTAGAGGAGGGATTCCGAAAGATCGCAAATGCCGTGTTCAATAGAGGGTGAACAGGAACATCGTGTTCAA]




>consensus_10417#2
TGATCCTAAAGCAGACGCGACAGAATTGGAACATTACTGCACAATACTAACTAGACTGTC
AATATTTTCTTGAAGCCCACGCAGTAATTCACTGATTGAGTTGCTAAGTTGCTTACACTG
GTATAAAAGAGCTAACACCCACTGTGAGGCGGCATCTAAAGTAGATTCAGGAGTAGAGGA
GGGATTCCGAAAGATCGCAAATGCCGTGTTCAATAGAGGGTGAACAGGAACATCGTGTTC
AA

consensusID : consensus_10417#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 131
fasta sequence

                              [CACAATAATACCATTTATAATCGCTACTACTGGTAGTAGTATCTTATTAAAATATGAGAACCATATAGTGAATAGTTAATTTGCAAAACTACAATCAATTGTCTCAACTTTGACTGTTTCTATCTGCAAAT]

[+] EMBL CD157123             [CACAATAATACCATTTATAATCGCTACTACTGGTAGTAGTATCTTATTAAAATATGAGAACCATATAGTGAATAGTTAATTTGCAAAACTACAATCAATTGTCTCAACTTTGACTGTTTCTATCTGCAAAT]




>consensus_10417#3
CACAATAATACCATTTATAATCGCTACTACTGGTAGTAGTATCTTATTAAAATATGAGAA
CCATATAGTGAATAGTTAATTTGCAAAACTACAATCAATTGTCTCAACTTTGACTGTTTC
TATCTGCAAAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10417#0      GTTTGCGCAACAGCGATGGATATGGCCAATCCTCTTACTTCTGTCATGGATTTGATGCGA 60
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CGTCTACCGCCTCAAAAAATCAATCATACTTTGGTGGATGTAATCTCGCTTAAACCAGAA 120
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CACTGTGAAGATATTTTAAGCTCAGTGGATCAACCTTTAAAGATCGCGAGAGATGTCCAT 180
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      GCTGATCGTGATTATTTATTATGCGATTATAACAGAGATGGTGATTCTTATCGATCACCT 240
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      TGGTCAAATACCTACGACCCACCACTAGAAGATGGAGCTATGCCAAGTGAAAGTCTTCGT 300
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      AAACGAGAAATAGAAATTAATACAGCTTTTGATCAATACAGAGAAATGAAAGGCCTTCTG 360
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      CTAAAATATCCTTATATAAGCTTACAAGTACAGTTATGCTATGGCTTCAAACCCAACGAG 420
consensus_10417#2      -----------------------------------------TGATCCTAAAGCAGACGCG 19
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      ------------------------------------------------------------
                                                                                   

consensus_10417#0      AATCTGCAGGTTATTTCAATCTTGGTGGTAGTCTTTCAAGATTCAGTG--AGC-GTGAAC 477
consensus_10417#2      A-----CAGA--ATTGGAACATTACTG-------CACAATACTAACTA--GACTGTCAAT 63
consensus_10417#3      --------------CACAATAATACCA-----TTTATAATCGCTACTACTGGTAGTAGTA 41
consensus_10417#1      --------------TTCAATGGAAAGA-------TGGAATCAAAGATATTGTT--TCGAA 37
                                        **                  **       *        *    

consensus_10417#0      TTCCTTTGGGAGACTCANGTGTTCCAATAACT-ACTTCACATATTGTTAATATTGGCCGT 536
consensus_10417#2      ATTTTCTTGAAG-CCCACGCAGTA-ATTCACT-GATTGA---GTTGCTAA-GTTGCTTAC 116
consensus_10417#3      TCTTATTAAAATATGAGAACCATATAGTGAAT-AGTTAA---TTTGCAAA-ACTACAATC 96
consensus_10417#1      ACTTTCAAAAGCAGAGGTCTCCTGCAGCTACTTAATCGAC--ATTCTAAAATTTATTCCT 95
                                             *  *   * *   *  *    **   **   *      

consensus_10417#0      A-TGGTAGAAGATGTTGAAAACTCAATCCGCTCAACGCTCAATGAAGTATATTTCGGTAC 595
consensus_10417#2      ACTGGTATAAAAGAGCTAACACCCA--CTGTGAGGCGGCATCTAAAGTAGATTCAGGAGT 174
consensus_10417#3      AATTGTCTCAACTTTGACTGTTTCTATCTGCAAAT------------------------- 131
consensus_10417#1      GAAGGGATGAACAGCAGTACTCTTCGACTGGGGATGAATCGTCGACACGCTCTTATGAGT 155
                           *    *                 * *                              

consensus_10417#0      AACAAAAAATATTGTTGATTCATTACGTTCTATCGTACCTGCCTCAGAAGAGGAAAAACG 655
consensus_10417#2      AGAGGAGG--------GATTCCGAAAGATCGCAAATGCCGTGTTCAATAGAGGGTGAACA 226
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      CAGTTTGAAGGGAGTAAACAGTTTGTGTTGGAGTTTCTGTCTCACAGAGCAAAATCAGAA 215
                                                                                   

consensus_10417#0      TCGGCGTTTAGTTCAAGAAGTACACACAGCCTTACAAAATAAGTCCCAGTTATAGATACT 715
consensus_10417#2      GGAACATCGTGTTCAA-------------------------------------------- 242
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      CAAATGGTTATCTTAGCTAAAGTATATAATTGTCTTGCAAGTTGGTGGGATAATACTGGG 275
                                                                                   

consensus_10417#0      CTTCATTTCATCACATTTAGCTCTAATATGCGCTAATAACTTTTTGATTTTTTCTCCTAA 775
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      ATCATGGTTGAACACGATGTACCTATTGACCCTCTCTTGAACACTGCATTTGCTATCCTT 335
                                                                                   

consensus_10417#0      ACACCGAATATTTCAAGAATGCTCAGTATTTCTTTCAAATGATTACTATTCCCCTTTTAT 835
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      CGGAATCCCTCCACTACTCCTGAATCAACTTTCGATGCCGCCTCTCAGTGGGTGCTAGCA 395
                                                                                   

consensus_10417#0      GTGTTATTCAGTTGTGTGGTTTTTATCTGTGGTATTCGTAAACTTCAGCGTATCTGGGAC 895
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      CTTTTATACCAGTGTAAGCAGCTTAGCAACTCAAACAGTGAATTACTGCGTTGGCTTCAA 455
                                                                                   

consensus_10417#0      TTACAAAACTTTTTCGATTCTTAGAAAAACTTCACGTCGGTCGTTCTCTTATATGTCGCT 955
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      GAAAATATTTACAGTCTAGTTAGTATTGTGCAGGAATGTTCCAATTCTGTCGCGTCTGCT 515
                                                                                   

consensus_10417#0      TTTTTATAATATCATTCCTGTTAACAATATTTTTTGAAGTCAACTTTGAAGATAACCTTG 1015
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      TTAGGATCAATTCAACAACAAGAACAGCTTGAACTGTACAAAGATCGATGTACGTGTTTG 575
                                                                                   

consensus_10417#0      AATACGTGTATTTCATAATTCTACTTTAGTATTTTCACTATGCAAAACAGAATCATCGCT 1075
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      GCTCACATTTTCTCGTCACTAGCCAGAACTTTACGGCCTCCTCTAGTAGATCAACCCACT 635
                                                                                   

consensus_10417#0      GGCCCTCTCTTTTGTTAACGATGGTTATGGTAACCTGTTTTTAAAACTATTATTATTGAT 1135
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      AGCCCTGGATCTGGTGGTTTTGGAGATTTGCGTACTATGGAGTGTATTCTCGTAGTTCTT 695
                                                                                   

consensus_10417#0      TACTCTCCCCCTATCCACAACCACATTGGCCAATTATTGTACAAATGTTATTTTTCTATT 1195
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      GAAATACCTCCTCCTCTTGGTAGTCGTGAATTGGCATCTATTACATTCCACGCCTTGCAT 755
                                                                                   

consensus_10417#0      TTTTGGTATAATGTGGTCTGTTTGGTTAGTATATAAACCCAGTATGTTTGTGAATAATGA 1255
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      TCGTTGGCTGATGATGCGATTCGACACCGGTCCATGAGTGCTGCAGTATCTGTGAATCAG 815
                                                                                   

consensus_10417#0      TTCGTATTGCCGAGGCTGTTATTGGTGTTCTGGACTTAACTGGCTGGGCTAGACAGAAAG 1315
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      GGCCCCTTGGAATCTTCGGTTAACAGCTCTAATGCTTCTACTGGCGTGACACGCCCAGTT 875
                                                                                   

consensus_10417#0      CAGGGCCGATACGCGCTCAAGACTGCTCTTACGATTTCGTGCATCATTGGGCGATCAATA 1375
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      GCAGCCTTAATTCCTTACTTTACTCGTGTTGTGGTTGCGTTAACCAGTTACTGTCCTAGT 935
                                                                                   

consensus_10417#0      AATTCACTGCTTTCTTATTGGGCGTCCATATATCAAATAGGGCACACGCACGCACGTACT 1435
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      AATACATCCGATTTAGAAAGCACCGATGAATTGAGAGATTTTCGTGAGGATGTTCATGAT 995
                                                                                   

consensus_10417#0      TACACGATATAACACTCTCTAAAAGGCTCATGATAAGAATAAACATTTATAAATCTATTG 1495
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      CTCATG-CAAGATATTCTGGGTTTGGTTGGAGCTGAGGCTATTTTTGTCGAGCTATACAA 1054
                                                                                   

consensus_10417#0      ATATTCTAGTGGCTACTGATAACACGCTGAAATCACTGATAAAATAGATAGTTTTCCACT 1555
consensus_10417#2      ------------------------------------------------------------
consensus_10417#3      ------------------------------------------------------------
consensus_10417#1      TTATGTTCAGAAGCTGCA------------------------------------------ 1072
                                                                                   

consensus_10417#0      CAGGATAAAACACAACAT 1573
consensus_10417#2      ------------------
consensus_10417#3      ------------------
consensus_10417#1      ------------------