cluster # 10418

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Schistosoma mansoni
cluster # 10418 cluster # 10418 Sequences # 16 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10418#0 length = 953 sequences # 6
consensus_10418#1 length = 901 sequences # 2

consensus_10418#2 length = 579 sequences # 5
consensus_10418#3 length = 391 sequences # 2
consensus_10418#4 length = 298 sequences # 1

consensusID : consensus_10418#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 953
fasta sequence

                              [TTTCGGCTGTTTTGTTGGGTACCTCTCATCAAGAACTTCTGTTGAAGAGTTTGAGGATTCGGAAGCACTCTTTGGTAGAGCAGTTTCTCAGGGATCCTTGATACTAGGACGAATTCAT--GTATCTGAACCACTAGATGGCTGTATAGACCGAATACCCAAACCTAAAAATGCGTCCAATTCAACTCTTCCTTACATCTCACTCATCTAACGTGGGAACTGCTCTTTTGTAGATAAGGCTACAGCGGCCGAAAAAGGTGGATATATTGCAGCTGTTATTTTCAATGATGCGGATGACAGTACTTTCCCAATGGGCTACAATTCATCCACAAATGTCAGTATTCCTGCAGTCATGGTTGGTTTATCTGACGGTGAGCTCTTACTGAATAAGTACTGGGAGTCACGTTATTTTGTTGAAATCTTACCTACTCACCGCCGAAGTATCCTGTTATATCTTATTCCACTTATAACATGTCTGCTGATATCTGTAGTCGCACTAAGTGTGGCATATGGGATTCGGTTTTTGAATCGATAC-CGAAGAAGATATCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATACCTGAAACTTTATTTACTAAAGACTCCAGTG-AATTTGAAACTTGTGCAATTTGTTTAGAAGATTATAAAGATGGTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGTGTAGATCCATGGCTTTTAAAACGTCGTGGTGTTTGTCCTATATGTAAGAAAAAAGTTCACAATCGTCCCAGAGTCAACACTTCAAACTCTACAAGATTTAGACGCGCTTCTGCATATGCCACTACATCTGAAGCTCCACTTTTGGATGATTCGTCTTTCGAAGAAGATTCTGATTCAGAAGATACTATTTCATCACCCCAATTTAGTTCCTACGGTGAGGACGTCCATTCAGATGAACATACTCCACTCA]

[-] EMBL CD186798             [TTTCGGCTGTTTTGTTGGGTACCTCTCATCAAGAACTTCTGTTGAAGAGTTTGAGGATTCGGAAGCACTCTTTGGTAGAGCAGTTTCTCAGGGATCCTTGATACTAGGACGAATTCAT  GTATCTGAACCACTAGATGGCTGTATAGACCGAATACCCAAACCTAAAAATGCGTCCAATTCAACTCTTCCTTACATCTCACTCATCTAACGTGGGAACTGCTCTTTTGTAGATAAGGCTACAGCGGCCGAAAAAGGTGGATATATTGCAGCTGTTATTTTCAATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD079781             [                                                                                               atTTGGCACGAGGNCCAATTCATNNGTATCTGAACCACTAGATGGCTGTATAGACCGAATACCCAAACCTAAAAATGCGTCCAATTCAACTCTTCCTTACATCTCACTCATCAAACGTGGGAACTGCTCTTTTGTAGATAAGGCTACAGCGGCCGAAAAAGGTGGATATATTGCAGCTGTTATTTTCAATGATGCGGATGACAGTACTTTCCCAATGGGCTACAATTCATCCACAAATGTCAGTATTCCTGCAGTCATGGTTGGTTTATCTGACGGTGAGCTCTTACTGAATAAGTACTGGGAGTCACGTTATTTTGTTGAAATCTTACCTACTCACCGCCGAAGTATCCTGTTATATCTTATTCCACTTATAACATGTCTGCTGATATCTGTAGTCGCACTAAGTGTGGCATATGGGATTCGGTTTTTGAATCGATAC CGAAGAAGATATCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATACCTGAAACTTTATTTACTAAAGACTCCAGTG AATTTGAAACTTGTGCAATTTGTTTAGAAGATTATAAAGATGGTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGTGTAGATCCATGGCTNTTAAAACGTCGTGGTGTTTG                                                                                                                                                                                                                       ]
[+] EMBL CD201407             [                                                                                                                                                                                                                                                                                                   GATGACAGTACTTTCCCAATGGGCTACAATTCATCCACAAATGTCAGTATTCCTGCAGTCATGGTTGGTTTATCTGACGGTGAGCTCTTACTGAATAAGTACTGGGGGTCACGTTATTTTGTTGAAATCTTACCTACTCACCGCCGAAGTATCCTGTTATATCTTATTCCACTTATAACATGTCTGCTGATATCTGTAGTCGCACTAAGTGTGGCATATGGGATTCGGTTTTTGAATCGATAC CGAAGAAGATATCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATACCTGAAACTTTATTTACTAAAGACTCCAGTG AATTTGAAACTTGTGCAATTTGTTTAGAAGATTATAAAGATGGTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGTGTAGATCCATGGCTTTTAAAACGTCGTGGTGTTTGTCCTATATGTAAGAAAAAAGTTCACAATCGTCCCAGAGTCAACACTTCAAACTCTACAAGATTTAGACGCGCTTCTGCATATGCCACTACAT                                                                                                                           ]
[+] EMBL CD200559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGCATATGGGATTCGGTTTTTGGATCGATACTCGAAGAAGATATCCATATTGCTTACCAGCCAAAGAGTCACGTAAAATACCTGAAACTTTATTTACTGGCCACTCTATTGAAATTTGAAACTTGTGCAATTTGTTTAGAAGATTATAAAGATGGTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGTGTAGATCCATGGCTTTTAAAACGTCGTGGTGTTTGTCCTATATGTAAGAAAAAAGTTCACAATCGTCCCAGAGTCAACACTTCAAACTCTACAAGATTTAGACGCGCTTCTGCATATGCCACTACATCTGAAGCTCCACTTTTGGATGATTCGTCTTTCGAAGAAGATTCTGATTCAGAAGATACT                                                                ]
[+] EMBL CD096529             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATGGGATTCGGTTTTTGAATCGATAC CGAAGAAGATATCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATACCTGAAACTTTATTTACTAAAGACTCCAGTG AATTTGAAACTTGTGCAATTTGTTTAGAAGATTATAAAGATGGTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGTGTAGATCCATGGCTTTTAAAACGTCGTGGTGTTTGTCCTATATGTAAGAAAAAAGTTCACAATCGTCCCAGAGTCAACACTTCAAACTCTACAAGATTTAGACGCGCTTCTGCATATGCCACTACATCTGAAGCTCCACTTTTGGATGATTCGTCTTTCGAAGAAGATTCTGATTCAGAAGATACTATTTCATCACCCCAATTTAGTTCCTACGGTGAGGACGTCCATTCAGATGAACATACTCCACTCA]
[+] EMBL CD096539             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATGGGATTCGGTTTTTGAATCGATAC CGAAGAAGATATCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATACCTGAAACTTTATTTACTAAAGACTCCAGTG AATTTGAAACTTGTGCAATTTGTTTAGAAGATTATAAAGATGGTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGTGTAGATCCATGGCTTTTAAAACGTCGTGGTGTTTGTCCTATATGTAAGAAAAAAGTTCACAATCGTCCCAGAGTCAACACTTCAAACTCTACAAGATTTAGACGCGCTTCTGCATATGCCACTACATCTGAAGCTCCACTTTTGGATGATTCGTCTTTCGAAGAAGATTCTGATTCAGAAGATACTATTTCATCACCCCAATTTAGTTCCTACGGTGAGGACGTCCATTCAGATGAACATACTCCACTCA]




>consensus_10418#0
TTTCGGCTGTTTTGTTGGGTACCTCTCATCAAGAACTTCTGTTGAAGAGTTTGAGGATTC
GGAAGCACTCTTTGGTAGAGCAGTTTCTCAGGGATCCTTGATACTAGGACGAATTCATGT
ATCTGAACCACTAGATGGCTGTATAGACCGAATACCCAAACCTAAAAATGCGTCCAATTC
AACTCTTCCTTACATCTCACTCATCTAACGTGGGAACTGCTCTTTTGTAGATAAGGCTAC
AGCGGCCGAAAAAGGTGGATATATTGCAGCTGTTATTTTCAATGATGCGGATGACAGTAC
TTTCCCAATGGGCTACAATTCATCCACAAATGTCAGTATTCCTGCAGTCATGGTTGGTTT
ATCTGACGGTGAGCTCTTACTGAATAAGTACTGGGAGTCACGTTATTTTGTTGAAATCTT
ACCTACTCACCGCCGAAGTATCCTGTTATATCTTATTCCACTTATAACATGTCTGCTGAT
ATCTGTAGTCGCACTAAGTGTGGCATATGGGATTCGGTTTTTGAATCGATACCGAAGAAG
ATATCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATACCTGAAACTTTATTTACTAA
AGACTCCAGTGAATTTGAAACTTGTGCAATTTGTTTAGAAGATTATAAAGATGGTAATAA
ATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGTGTAGATCCATGGCTTTT
AAAACGTCGTGGTGTTTGTCCTATATGTAAGAAAAAAGTTCACAATCGTCCCAGAGTCAA
CACTTCAAACTCTACAAGATTTAGACGCGCTTCTGCATATGCCACTACATCTGAAGCTCC
ACTTTTGGATGATTCGTCTTTCGAAGAAGATTCTGATTCAGAAGATACTATTTCATCACC
CCAATTTAGTTCCTACGGTGAGGACGTCCATTCAGATGAACATACTCCACTCA

consensusID : consensus_10418#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 901
fasta sequence

                              [GGGCCATATTCGGCACGACGAACACTTCAAACTCTACATGATTTAGACGCGCTTCTGCATATGCCACTACATCTGAAGCTCCACTTTTGGATGATTCGTCTTTCGAAGAAGATTCTGATTCAGAAGATACTATTTCATCACCCCAATTTAGTTCCTACGGTGAGGACGTCCATTCAGATGAACATACTCCACTCATTAATGCTTCTGCTGACCAATCAAGTGCTTCATCACTTAAGCGAATGAAGATGACTGCCTCAATCCGTGAAACTTTGGAAAGCTTTCTCACAAATGTATCAAGTTCTTATTCCAGAGGTCATAGTTCATCCGAACATGAACAGGGAACTAACAATGTTAATACAGCCGTGGAATTACAACCTGAATGTTCTCAGATTGTTGCTGAATCTCTCGCAAAAGTTGAATAATTCATGTGAAAAAACACACACACAGTGATTGTTGTTTATGTGAAAGTATTTCTTACTTAAACCACTTTTTTTCTTATTCATTCCTCCTACACATTGTTCTAAAATGTAAAATAAATAAATTCGATACAATTCTTGTATAACCTAACCTTTATACTAAGAGATAATACTTTCATTCTTAATTCCTTTAATCCTTAACCTTATTTTATATGGATTGATTTAAAATAAGAATTTTTGTTTGTAGACATTTAACGGTTCAAAGTGAATTGTAAATGGAAATGACACTTAAAATATTTAGAAATTTTATTCATAAAACTATCTTAATTATGTGTATGTATTTACTTTTTGCCAGCGTCAAGTTGAATTTCTCGGTGTTTCTTTGAAAGGCCCTGACTTATAGAGTTAACAGTCCCGACAATAGGTAACTTTGCACCGAGATTGTATAGTGATCATTTGATTTACATACTAAATAATTGTATAAC]

[+] EMBL CD081685             [GGGCCATATTCGGCACGACGAACACTTCAAACTCTACATGATTTAGACGCGCTTCTGCATATGCCACTACATCTGAAGCTCCACTTTTGGATGATTCGTCTTTCGAAGAAGATTCTGATTCAGAAGATACTATTTCATCACCCCAATTTAGTTCCTACGGTGAGGACGTCCATTCAGATGAACATACTCCACTCATTAATGCTTCTGCTGACCAATCAAGTGCTTCATCACTTAAGCGAATGAAGATGACTGCCTCAATCCGTGAAACTTTGGAAAGCTTTCTCACAAATGTATCAAGTTCTTATTCCAGAGGTCATAGTTCATCCGAACATGAACAGGGAACTAACAATGTTAATACAGCCGTGGAATTACAACCTGAATGTTCTCAGATTGTTGCTGAATCTCTCGCAAAAGTTGAATAATTCATGTGAAAAAACACACACACAGTGATTGTTGTTTATGTGAAAGTATTTCTTACTTAAACCACTTTTTTTCTTATTCATTCCTCCTACACATTGTTCTAAAATGTAAAATAAATAAATTCGATACAATTCTTGTATAACCTAACCTTTATACTAAGAGATAATACTTTCATTCTTAATTCCTTTAATCCTTAACCTTATTTTATATGGATTGATTTAAAATAAGAATTTTTGTTTGTAGACATTTAACGGTTCAAAGTGAATTGTAAATGGAAATGACACTTAAAATATTTAGAAATTTTATTCATAAAACTATCTTAATTATGTGTATGTATTTACTTTTTGCCAGCGTCAAGTTGAATTTCTCGGTGTTTCTTTGAAAGGCCCTGACTTATAGAGTTAACAGTCCCGACAATAGGTAACTTTGCACCGAGATTGTATAGTGATCATTTGATTTACATACTAAATAATTGTATAAC]
[+] EMBL CD120679             [                                                                                              TTCGTCTTTCGAAGAAGATTCTGATTCAGAAGATACTATTTCATCACCCCAATTTAGTTCCTACGGTGAGGACGTCCATTCAGATGAACATACTCCACTCATTAATGCTTCTGCTGACCAATCAAGTGCTTCATCACTTAAGCGAATGAAGATGACTGCCTCAATCCGTGGAACTTTGGAAAGCTTTCTCACAAATGTATCAAGTTCTTATTCCAGAGGTCATAGTTCATCCGAACATGAACAGGGAACTAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_10418#1
GGGCCATATTCGGCACGACGAACACTTCAAACTCTACATGATTTAGACGCGCTTCTGCAT
ATGCCACTACATCTGAAGCTCCACTTTTGGATGATTCGTCTTTCGAAGAAGATTCTGATT
CAGAAGATACTATTTCATCACCCCAATTTAGTTCCTACGGTGAGGACGTCCATTCAGATG
AACATACTCCACTCATTAATGCTTCTGCTGACCAATCAAGTGCTTCATCACTTAAGCGAA
TGAAGATGACTGCCTCAATCCGTGAAACTTTGGAAAGCTTTCTCACAAATGTATCAAGTT
CTTATTCCAGAGGTCATAGTTCATCCGAACATGAACAGGGAACTAACAATGTTAATACAG
CCGTGGAATTACAACCTGAATGTTCTCAGATTGTTGCTGAATCTCTCGCAAAAGTTGAAT
AATTCATGTGAAAAAACACACACACAGTGATTGTTGTTTATGTGAAAGTATTTCTTACTT
AAACCACTTTTTTTCTTATTCATTCCTCCTACACATTGTTCTAAAATGTAAAATAAATAA
ATTCGATACAATTCTTGTATAACCTAACCTTTATACTAAGAGATAATACTTTCATTCTTA
ATTCCTTTAATCCTTAACCTTATTTTATATGGATTGATTTAAAATAAGAATTTTTGTTTG
TAGACATTTAACGGTTCAAAGTGAATTGTAAATGGAAATGACACTTAAAATATTTAGAAA
TTTTATTCATAAAACTATCTTAATTATGTGTATGTATTTACTTTTTGCCAGCGTCAAGTT
GAATTTCTCGGTGTTTCTTTGAAAGGCCCTGACTTATAGAGTTAACAGTCCCGACAATAG
GTAACTTTGCACCGAGATTGTATAGTGATCATTTGATTTACATACTAAATAATTGTATAA
C

consensusID : consensus_10418#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 579
fasta sequence

                              [CAANAATTCGGCACGAGGAACGCGGCCGAAAAAGGTGGATATATTGCAGCTGTTATTTTCAATGATGCGGATGACAGTACTTTCCCAATGGGCTACAATTCATCCACAAATGTCAGTATTCCTGCAGTCATGGTTGGTTTATCTGACGGTGAGCTCTTACTGAATAAGTACTGGGAGTCACGTTATTTTGTTGAAATCTTACCTACTCACCGCCGAAGTATCCTGTTATATCTTATTCCACTTATAACATGTCTGCTGATATCTGTAGTCGCACTAAGTGTGGCATATGGGATTCGGTTTTTGAATCGATACCGAAGAAGATATCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATACCTGAAACTTTATTTACTAAAGACTCCAGTGAATTTGAAACTTGTGCAATTTGTTTA-GAAGATTATAAAGATGGTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGTGTAGATCCATGGCTTTTAAAACGTCGTGGTGTTTGTCCTATATGTAAGAAAAAAGTTCACAATCGTCCCAGAGTCAACACTTCAAACTCTACAAGA]

[+] EMBL CD083213             [CAANAATTCGGCACGAGGAACGCGGCCGAAAAAGGTGGATATATTGCAGCTGTTATTTTCAATGATGCGGATGACAGTACTTTCCCAATGGGCTACAATTCATCCACAAATGTCAGTATTCCTGCAGTCATGGTTGGTTTATCTGACGGTGAGCTCTTACTGAATAAGTACTGGGAGTCACGTTATTTTGTTGAAATCTTACCTACTCACCGCCGAAGTATCCTGTTATATCTTATTCCACTTATAACATGTCTGCTGATATCTGTAGTCGCACTAAGTGTGGCATATGGGATTCGGTTTTTGAATCGATACCGAAGAAGATATCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATACCTGAAACTTTATTTACTAAAGACTCCAGTGAATTTGAAACTTGTGCAATTTGTTTA GAAGATTATAAAGATGGTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGTGTAGATCCATGGCTTTTAAAACGTCGTGGTGTTTGTCCTATATGTAAGAAAAAAGTTCACAATCGTCCCAGAGTCAACACTTCAAACTCTACAAGA]
[-] EMBL CD185711             [                                                                                                   TCATCCACAAATGTCAGTATTCCTGCAGTCATGGTTGGTTTATCTGACGGTGAGCTCTTACTGAATAAGTACTGGGAGTCACGTTATTTTGTTGAAATCTTACCTACTCACCGCCGAAGTATCCTGTTATATCTTATTCCACTTATAACATGTCTGCTGATATCTGTAGTCGCACTAAGTGTGGCATATGGGATTCGGTTTTTGAATCGATACCGAAGAAGATATCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATACCTGAAACTTTATTTACTAAAGACTCCAGTGAATTTGAAACTTGTGCAATTTGTTTA GAAGATTATAAAGATGGTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGTGTAGATCCATGGCTTTTAAAACGTCGTGGTGTTTGTCCTATATGTAAGAAAAAAGTT                                       ]
[+] EMBL BG931097             [                                                                                                                                                         CTCTTACTGAATAAGTACTGGGAGTCAGGTTATTTGGTGGAAATCTTACCTACTCACCGCCGAAGTATCCTGTTATATCTTATTCCACTTATAACATGTCTGCTGATATCTGTAGTCGCACTAAGTGTGGCATATGGGATTCGGTTTATGAATCGATACCGAAGAAGATATCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATACCTGAAACTGTATTTACTAAAGACTCCAGTGAATTTGAAACTTGTGCAATTTGTGTATGAAGATTATAAAGATGGTAAT                                                                                                                                             ]
[-] EMBL CD130188             [                                                                                                                                                                                                                                                                                                                                                                 TAAAATACCTGAAACTTTATTTACTAAAGACTCCAGTGAATTTGAAACTTGTGCAATTTGTTTA GAAGATTATAAAGATGGTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGT                                                                                                ]
[-] EMBL CD183920             [                                                                                                                                                                                                                                                                                                                                                                 TAAAATACCTGAAACTTTATTTACTAAAGACTCCAGTGAATTTGAAACTTGTGCAATTTGTTTA GAAGATTATAAAGATGGTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGT                                                                                                ]




>consensus_10418#2
CAANAATTCGGCACGAGGAACGCGGCCGAAAAAGGTGGATATATTGCAGCTGTTATTTTC
AATGATGCGGATGACAGTACTTTCCCAATGGGCTACAATTCATCCACAAATGTCAGTATT
CCTGCAGTCATGGTTGGTTTATCTGACGGTGAGCTCTTACTGAATAAGTACTGGGAGTCA
CGTTATTTTGTTGAAATCTTACCTACTCACCGCCGAAGTATCCTGTTATATCTTATTCCA
CTTATAACATGTCTGCTGATATCTGTAGTCGCACTAAGTGTGGCATATGGGATTCGGTTT
TTGAATCGATACCGAAGAAGATATCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATA
CCTGAAACTTTATTTACTAAAGACTCCAGTGAATTTGAAACTTGTGCAATTTGTTTAGAA
GATTATAAAGATGGTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAA
TGTGTAGATCCATGGCTTTTAAAACGTCGTGGTGTTTGTCCTATATGTAAGAAAAAAGTT
CACAATCGTCCCAGAGTCAACACTTCAAACTCTACAAGA

consensusID : consensus_10418#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 391
fasta sequence

                              [ACTGTCTCATCTCAATGGGTTCCTATTCACTTTAGTCGAGGATTTCTCTCCAGTAATA-TCAAATGTAATGAAAGCGTTGATTTATGCTTTACTTGCGTGCGTTACACTGGATGCAGACGTTTCGGCTGTTTTGTTGGTTAAAGACCTCTCATCAAGAACTTCTGTTGAAGAGTTTGAGGATTCGGAAGCACTCTTTTGTAGATAAGGCTACAGCGGCCGAAAAAGGTGGATATATTGCAGCTGTTATTTTCAATGATGCGGATGACAGTACTTTCCCAATGGGCTACAATTCATGTAAGGTTTCTCCCCTTTGTCTTTTTTTTGGTAGCCACAAATGTCAGTATTCCTGCAGTCATGGTTGGTTTATCTGACGGTGAGCTCTTACTGAATA]

[+] EMBL CD154794             [ACTGTCTCATCTCAATGGGTTCCTATTCACTTTAGTCGAGGATTTCTCTCCAGTAATA TCAAATGTAATGAAAGCGTTGATTTATGCTTTACTTGCGTGCGTTACACTGGATGCAGACGTTTCGGCTGTTTTGTTGGTTAAAGACCTCTCATCAAGAACTTCTGTTGAAGAGTTTGA                                                                                                                                                                                                                      ]
[+] EMBL CD169415             [                                                    cgAATACCCAAACCTAA AAAAGCGTTGATTTATGCTTTACTTGCGTGCGTTACACTGGATGCAGACGTTTCGGCTGTTTTGTTGGTTAAAGACCTCTCATCAAGAACTTCTGTTGAAGAGTTTGAGGATTCGGAAGCACTCTTTTGTAGATAAGGCTACAGCGGCCGAAAAAGGTGGATATATTGCAGCTGTTATTTTCAATGATGCGGATGACAGTACTTTCCCAATGGGCTACAATTCATGTAAGGTTTCTCCCCTTTGTCTTTTTTTTGGTAGCCACAAATGTCAGTATTCCTGCAGTCATGGTTGGTTTATCTGACGGTGAGCTCTTACTGAATA]




>consensus_10418#3
ACTGTCTCATCTCAATGGGTTCCTATTCACTTTAGTCGAGGATTTCTCTCCAGTAATATC
AAATGTAATGAAAGCGTTGATTTATGCTTTACTTGCGTGCGTTACACTGGATGCAGACGT
TTCGGCTGTTTTGTTGGTTAAAGACCTCTCATCAAGAACTTCTGTTGAAGAGTTTGAGGA
TTCGGAAGCACTCTTTTGTAGATAAGGCTACAGCGGCCGAAAAAGGTGGATATATTGCAG
CTGTTATTTTCAATGATGCGGATGACAGTACTTTCCCAATGGGCTACAATTCATGTAAGG
TTTCTCCCCTTTGTCTTTTTTTTGGTAGCCACAAATGTCAGTATTCCTGCAGTCATGGTT
GGTTTATCTGACGGTGAGCTCTTACTGAATA

consensusID : consensus_10418#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 298
fasta sequence

                              [TGTCTCATCTCAATGGGTTCCTATTCACTTTAGTCGAGGATTTCTCTCCAGTAATATCAAATGTAATGAAAGCGTTGATTTATGCTTTACTTGCGTGCGTTACACTGGATGCAGACGTTTCGGCTGTTTTGTTGGTTGTATGTCACAGTGTTTTGTATGTAGTAGTTTTAGGAAGACCTCTCGTCAAGAACTTCTGTTGAAGAGTTTGAGGATTCGGAAGCACTCTTTGGTAGAGCAGTTTCTCAGGGATCCTTGATACTAGGACGAATTCATGTATCTGAACCACTAGATGGCTGTA]

[-] EMBL CD158161             [TGTCTCATCTCAATGGGTTCCTATTCACTTTAGTCGAGGATTTCTCTCCAGTAATATCAAATGTAATGAAAGCGTTGATTTATGCTTTACTTGCGTGCGTTACACTGGATGCAGACGTTTCGGCTGTTTTGTTGGTTGTATGTCACAGTGTTTTGTATGTAGTAGTTTTAGGAAGACCTCTCGTCAAGAACTTCTGTTGAAGAGTTTGAGGATTCGGAAGCACTCTTTGGTAGAGCAGTTTCTCAGGGATCCTTGATACTAGGACGAATTCATGTATCTGAACCACTAGATGGCTGTA]




>consensus_10418#4
TGTCTCATCTCAATGGGTTCCTATTCACTTTAGTCGAGGATTTCTCTCCAGTAATATCAA
ATGTAATGAAAGCGTTGATTTATGCTTTACTTGCGTGCGTTACACTGGATGCAGACGTTT
CGGCTGTTTTGTTGGTTGTATGTCACAGTGTTTTGTATGTAGTAGTTTTAGGAAGACCTC
TCGTCAAGAACTTCTGTTGAAGAGTTTGAGGATTCGGAAGCACTCTTTGGTAGAGCAGTT
TCTCAGGGATCCTTGATACTAGGACGAATTCATGTATCTGAACCACTAGATGGCTGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10418#0      TTTCGGCTGTTTTGTTGGGTACCTCTCATCAAGAACTTCTGTTGAAGAGTTTGAGGATTC 60
consensus_10418#2      ------------------------------------------------------------
consensus_10418#3      ------------------------------------------------------------
consensus_10418#4      ------------------------------------------------------------
consensus_10418#1      ----------------GGGCCATATTCGGCACGACGAACACTTCAAACTCTACATGATTT 44
                                                                                   

consensus_10418#0      GGAAGCACTCTTTGGTAGAGCAGTTTCTCAGGGATCCTTGATACTAGGACGAATTCATGT 120
consensus_10418#2      ------------------------------------------------------------
consensus_10418#3      ------------------------------------------------------------
consensus_10418#4      ------------------------------------------------------------
consensus_10418#1      AGACGCGCTTCTGCATATGCCACTACATCTGAAG--CTCCACTTTTGGATGATTCGTCTT 102
                                                                                   

consensus_10418#0      ATCTGAACCACTAGATGGCTGTATAGACCGAATACCCAAACCTAAAAATGCGTCCAATTC 180
consensus_10418#2      ------------------------------------------------------------
consensus_10418#3      ------------------------------------------------------------
consensus_10418#4      ------------------------------------------------------------
consensus_10418#1      TCGAAGAAGATTCTGATTCAGAAGATACTATTTCATCACCCCAATTTAGTTCCTACGGTG 162
                                                                                   

consensus_10418#0      AACTCTTCCTTACATCTCACTCATCTAACGTGGGAACTGCTCTTTTGTAGATAAGGCTAC 240
consensus_10418#2      ------------------------------------CAANAATTCGGCACGAGGAAC--- 21
consensus_10418#3      ------------------------------------------------------------
consensus_10418#4      ------------------------------------------------------------
consensus_10418#1      AGGACGTCCATTCAGATGAACATACTCCACTCATTAATGC--TTCTGCTGACCAATCAAG 220
                                                                                   

consensus_10418#0      AGCGGCCGAAAAAGGTGGATATATTGCAGCTGTTATTTTCAATGATGCGGATGACAGTAC 300
consensus_10418#2      -GCGGCCGAAAAAGGTGGATATATTGCAGCTGTTATTTTCAATGATGCGGATGACAGTAC 80
consensus_10418#3      ------------------------------------------------------------
consensus_10418#4      ------------------------------------------------------------
consensus_10418#1      TGCTTCATCACTTAAGCGAATGAAGATGACTGCCTCAATCCGTGAAACTTTGGAAAGCTT 280
                                                                                   

consensus_10418#0      TTTCCCAATGGGCTACAATTCATCCACAAATGTCAGTATTCCTGCAGTCATGGTTGGTTT 360
consensus_10418#2      TTTCCCAATGGGCTACAATTCATCCACAAATGTCAGTATTCCTGCAGTCATGGTTGGTTT 140
consensus_10418#3      ------------------------------------------------------------
consensus_10418#4      ------------------------------------------------------------
consensus_10418#1      TCTCACAAATGTATCAAGTTCTTATTCCAGAGGTCATAGTTCATCCGAACATGAACAGGG 340
                                                                                   

consensus_10418#0      ATCTGACGGTGAGCTCTTACTGAATAAGTACTGGGAGTCACGTTATTTTG-TTGAAATCT 419
consensus_10418#2      ATCTGACGGTGAGCTCTTACTGAATAAGTACTGGGAGTCACGTTATTTTG-TTGAAATCT 199
consensus_10418#3      ------------------------------------ACTGTCTCATCTCA-ATGGGTTCC 23
consensus_10418#4      --------------------------------------TGTCTCATCTCA-ATGGGTTCC 21
consensus_10418#1      AACTAACAAT--GTTAATACAGCCGTGGAATTACAACCTGAATGTTCTCAGATTGTTGCT 398
                                                                 *  * *    *     * 

consensus_10418#0      TACCTACTCACCGCCGAAGTATCCTGTTATATCTTATTCCACTTATAACATGTCTGCTGA 479
consensus_10418#2      TACCTACTCACCGCCGAAGTATCCTGTTATATCTTATTCCACTTATAACATGTCTGCTGA 259
consensus_10418#3      TATTCACTT-TAGTCGAGGATTTCTCTCCAGTAATAT--CAAATGTAATGAAAGCGTTGA 80
consensus_10418#4      TATTCACTT-TAGTCGAGGATTTCTCTCCAGTAATAT--CAAATGTAATGAAAGCGTTGA 78
consensus_10418#1      GAATCTCTCGCAAAAGTTGAATAAT-TCATGTGAAAAAACACACACACAGTGATTGTTGT 457
                        *    **       *  *  *  * *    *   *   **     *        * ** 

consensus_10418#0      TATCTGTAGTCGCACTAAGTGTGGCATATGGGATTCGGTTTTTGAATCGATACCGAAGAA 539
consensus_10418#2      TATCTGTAGTCGCACTAAGTGTGGCATATGGGATTCGGTTTTTGAATCGATACCGAAGAA 319
consensus_10418#3      --TTTATGCTTTACTTGCGTGCGTTACACTGGATGCAGACGTTTCGGCTGTTTTGTTGGT 138
consensus_10418#4      --TTTATGCTTTACTTGCGTGCGTTACACTGGATGCAGACGTTTCGGCTGTTTTGTTGGT 136
consensus_10418#1      T-TATGTGAAAGTATTTCTTACTTAAACCACTTTTTTTCTTATTCATTCCTCCTACACAT 516
                         * * *        *   *     *       *        *       *         

consensus_10418#0      GATA------TCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATACCTGAAACTTTAT 593
consensus_10418#2      GATA------TCGATATTGCTTACCAGCCAAAGAGTTACGTAAAATACCTGAAACTTTAT 373
consensus_10418#3      TAAAGACCTCTCATCAAGAACTTCTG-TTGAAGAGTT--TGAGGATTCGGAAGCACTCTT 195
consensus_10418#4      TGTA----TGTCA-CAGTGTTTTGTA-TGTAGTAGTT--TTAGGA------AGACCTCTC 182
consensus_10418#1      TGTTCTAAAATGTAAAATAAATAAATTCGATACAATT--CTTGTATAACCTAACCTTTAT 574
                                 *    *     *           * **       *      *    *   

consensus_10418#0      TTACTAAAGACTCCAGTGAATTTGAAACTTGTGCAATTTGTTTAGAAGATTATAAAGATG 653
consensus_10418#2      TTACTAAAGACTCCAGTGAATTTGAAACTTGTGCAATTTGTTTAGAAGATTATAAAGATG 433
consensus_10418#3      TTGTAGATAAGGCTACAGCGGCCGAAAAAGGTGGATATATTGCAGCTGTTATTTTCAATG 255
consensus_10418#4      GTCAAGA-------ACTTCTGTTGAAGAGTTTGAGGATTCGGAAGCACTCTTTGGTAGAG 235
consensus_10418#1      ACTAAGA-GATAATACTTTCATTCTTAATTCCTTTAATCCTTAACCTTATTTTATATGGA 633
                             *       *                      *     *        *       

consensus_10418#0      GTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGTGTAGATCCAT 713
consensus_10418#2      GTAATAAATTGAGAGTATTACCATGTAGGCACGCTTACCACAGTAAATGTGTAGATCCAT 493
consensus_10418#3      ATGCGGATGACAGTACTTTCCCAATGGGCTACAATT--CAT-GTAAGGTTTCTCCCCTTT 312
consensus_10418#4      CAGTTTCTCAGGGATCCTTGATACTAGGACG-AATT--CAT-GTATCTGAACCACTAGAT 291
consensus_10418#1      TTGATTTAAAATAAGAATTTTTGTTTGTAGACATTTAACGGTTCAAAGTGAATTGTAAAT 693
                                        **               **  *     *              *

consensus_10418#0      GGCTTTTAAAACGTCGTGGTGTTTGTCCTATATGTAAGAAAAAAGTTCACAATCGTCCCA 773
consensus_10418#2      GGCTTTTAAAACGTCGTGGTGTTTGTCCTATATGTAAGAAAAAAGTTCACAATCGTCCCA 553
consensus_10418#3      GTCTTTTTTTTGGTAGCCACAAATGTCA-GTATTCCTGCAGTCATGGTTGGTTTATCTGA 371
consensus_10418#4      GGCTGTA----------------------------------------------------- 298
consensus_10418#1      GGAAATGACACTTAAAATATTTAGAAATTTTATTCATAAAACTATCTTAATTATGTGTAT 753
                       *    *                                                      

consensus_10418#0      GAGTCAACACTTCAAACTCTACAAG----ATTTAGACGCGCTTCTGCATATGCCACTACA 829
consensus_10418#2      GAGTCAACACTTCAAACTCTACAAG----A------------------------------ 579
consensus_10418#3      CGGTGAGCTCTTACTGAATA---------------------------------------- 391
consensus_10418#4      ------------------------------------------------------------
consensus_10418#1      GTATTTACTTTTTGCCAGCGTCAAGTTGAATTTCTCGGTGTTTCTTTGAAAGGCCCTGAC 813
                                                                                   

consensus_10418#0      TCTGAAGCTCCACTTTTGGATGATTCGTCTTTCGAAGAAGATTCTGATTCAGAAGATACT 889
consensus_10418#2      ------------------------------------------------------------
consensus_10418#3      ------------------------------------------------------------
consensus_10418#4      ------------------------------------------------------------
consensus_10418#1      TTATAGAGTTAACAGTCCCGACAATAGGTAACTTTGCACCGAGATTGTATAGTGATCATT 873
                                                                                   

consensus_10418#0      ATTTCATCACCCCAATTTAGTTCCTACGGTGAGGACGTCCATTCAGATGAACATACTCCA 949
consensus_10418#2      ------------------------------------------------------------
consensus_10418#3      ------------------------------------------------------------
consensus_10418#4      ------------------------------------------------------------
consensus_10418#1      TGATTTACATACTAAATAATTGTATAAC-------------------------------- 901
                                                                                   

consensus_10418#0      CTCA 953
consensus_10418#2      ----
consensus_10418#3      ----
consensus_10418#4      ----
consensus_10418#1      ----