cluster # 10430

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Schistosoma mansoni
cluster # 10430 cluster # 10430 Sequences # 16 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10430#0 length = 1451 sequences # 11
consensus_10430#1 length = 500 sequences # 3

consensus_10430#2 length = 372 sequences # 1
consensus_10430#3 length = 264 sequences # 1

consensusID : consensus_10430#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1451
fasta sequence

                              [AGCCAAGNATTTGGCACGAGGGCTTTTNTGTCTCAAAATTTAGTGCTGAAGCTAAAGTTTTGTCCTAAAAGTAGTTACCTAACAGAGTGATCAAAATAACACTGACCAAAGTAGAACTTTTAAACAG-AATAAAGGGCATTTGAATTCATTATTTACCCAATCAATTAAATTTAAGCAGATGACCGAAACAGAAGAGGCGGTCATCCATCGGCGTAATGTTGTAAAGGAAAACAGTAACCTACCGGGAACTACAGATAATGTTGATGATGAACCAGAATCTGAAGCCGAATCCAAAGAAGTAAGACTAACGTTGATGGAAGAAATATTGCTGTTGGGACTAAAAGATCGAGAAGGATACTTATCATTTTGGAATGATAGTGTATGTTGTGGACTCCGAGGATGCATACTTGTTGAACTTGGTCTCAGAAATCGAATTGGACTTGAGCCGAGTGGGATGCGTCGTAGGAACCTGTCTTCTAGGTGTATTGTTGTCAAAAAGAGCGTACCGACTGGTGACGCATTGTTAGATGAGGCTCTCAAACATATCAGAGATAACAAGCCTGAAAATACGAAGACGTGGATTGAATATCTCAGCGGTGAAACATGGAACCCATTCAAATTACCATTACAGCTCCGCAATGTCAGGGAAAGGATAGCAAAAAATCTCGTAGAAAAACGCATATGCACAACAGAAAAACAGAACTTTATCCTTTTTGATATGATGACACACCCCTTAGTAGACCTTGGGAGTAAAAAACGCGTAATTAGCCGTATTCAGGATGTTGTTCTTAATAAATGGAGCACAGATGTTCAAAAAGTTGATAAGCGACTACTCTCTCTCGTGCTCTTGTCTCACTATTCTGATGTCCTAGAAAGTGCTTTACAACATCTTCCAGACAATGTTTATGATCTTGCCAGAAAGCGTATTGATGATGCTCTCCAAATGGACTTCTTTGCAGAGGCCAATAAAGAAGGTTCTTGTGAAATGTTGTGGGCAGTCATGGCTGCTCTTAATTCATAAAAACCAAATTACCAAATATCTTGGCTGTGATTATTTGTGTGAAGCTCCACCTCGCTATTTTCATGCAACCTTTAATTTACAATGACGTAGCTAACTTTTGTATTTTATACGAAACAGTTGAGTTAATATCGAATCAGATCTTTCCACAATGTTTATTCACACTGTGTGGTTTAATTTTCCATGGTTCACTTTGCAAACTTTTCTTTCACTGATTTGGTTCACCTTCCTAATTTAGGGAATTTGAAGACCTATTGATCTCTAATTTTTTTTAGTCTTAGTACATATTTATACACCGCTAAGACTAAAAATTCTGTAAAGATGCGTCACTTCCTACTTAACACCATCTCCATAAATATTTTAAGAAAACTCAAGGTGGTGTCCATGTTATGTACATCTCTGCCAATCTATTCAATAAAAATTTAAAATGAAN]

[+] EMBL CD080259             [AGCCAAGNATTTGGCACGAGGGCTTTTNTGTCTCAAAATTTAGTGCTGAAGCTAAAGTTTTGTCCTAAAAGTAGTTACCTAACAGAGTGATCAAAATAACACTGACCAAAGTAGAACTTTTAAACAG AATAAAGGGCATTTGAATTCATTATTTACCCAATCAATTAAATTTAAGCAGATGACCGAAACAGAAGAGGCGGTCATCCATCGGCGTAATGTTGTAAAGGAAAACAGTAACCTACCGGGAACTACAGATAATGTTGATGATGAACCAGAATCTGAAGCCGAATCCAAAGAAGTAAGACTAACGTTGATGGAAGAAATATTGCTGTTGGGACTAAAAGATCGAGAAGGATACTTATCATTTTGGAATGATAGTGTATGTTGTGGACTCCGAGGATGCATACTTGTTGAACTTGGTCTCAGAAATCGAATTGGACTTGAGCCGAGTGGGATGCGTCGTAGGAACCTGTCTTCTAGGTGTATTGTTGTCAAAAAGAGCGTACCGACTGGTGACGCATTGTTAGATGAGGCTCTCAAACATATCAGAGATAACAAGCCTGAAAATACGAAGACGTGGATTGAATATCTCAGCGGTGAAACATGGAACCCATTCAAATTACCATTACAGCTCCGCAATGTCAGGGAAAGGATAGCAAAAAATCTCGTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD080269             [                                                  GCTAAAGTTTTGTCTCAAAAGTAGTTACCTAACAGAGTGATCAAATTAACACTGACCAAAGTAGAACTTTTAAACAGTAATAAAGGGCATTTGAATTCATTATTTACCCAATCAATTAAATTTAAGCAGATGACCGATACAGAAGAGGCGGTCATCCATTGGCGTAATGTTGTAAAGGAAAACAGTAACCTACCGGGAACTACAGATAATGTTGATGATGAACCATAATCTGAAGCCGAATCCAAAGAAGTAAGACTAACGTTGATGGAAGAAATATTGCTGTTGGGACTAAAAGATCGAGAAGGATACTTATCATTTTGGAATGATAGTGTATGTTGTGGACTCCGAGGATGCATACTTGTTGAACTTGGTCTCACAAATCGAATTGGACTTGAGCCGAGTGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD156706             [                                                                                                                                                                                                                                                                     TTGATGATGAACCAGAATCTGAAGCCGAATCCAAAGAAGTAAGACTAACGTTGATGGAAGAAATATTGCTGTTGGGACTAAAAGATCGAGAAGGATACTTATCATTTTGGAATGATAGTGTATGTTGTGGACTCCGAGGATGCATACTTGTTGAACTTGGTCTCAGAAATCGAATTGGACTTGAGCCGAGTGGGATGCGTCGTAGGAACCTGTCTTCTAGGTGTATTGTTGTCAAAAAGAGCGTACCGACTGGTGACGCATTGTTAGATGAGGCTCTCAAACATATCAGAGATAACAAGCCTGAAAATACGAAGACGTGGATTGAATATCTCAGCGGTGAAACATGGAACCCATTCAAATTACCATTACAGCTCCGCAATGTCAGGGAAAGGATAGCAAAAAATCTCGTAGAAAAACGCATATGCACAACAGAAAAACAGAACTTTATCCTTTTTGATATGATGACACACCCCTTAGTAGACCTTGGGAGTAAAAAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD192084             [                                                                                                                                                                                                                                                                                         GAAGCCGAATCCAAAGAAGTAAGACTAACGTTGATGGAAGAAATATTGCTGTTGGGACTAAAAGATCGAGAAGGTTACTTATCATTTTGGAATGATAGTGTATGTTGTGGACTCCGAGGATGCATACTTGTTGAACTTGGTCTCAGAAATCGAATTGGACTTGAGCCGAGTGGGATGCGTCGTAGGAACCTGTCTTCTAGGTGTATTGTTGTCAAAAAGAGCGTACCGACTGGTGACGCATTGTTAGATGAGGCTCTCAAACATATCAGAGATAACAAGCCTGAAAATACGAAGACGTGGATTGAATATCTCAGCGGTGAAACATGGAACCCATTCAAATTACCATTACAGCTCCGCAATGTCAGGGAAAGGATAGCAAAAAATCTCGTAGAAAAACGCATATGCACAACAGAAAAACAGAACTTTATCCTTTTTGATATGATGACACACCCCTTAGTAGACCTTGGGAGTAAAAAACGCGTAATTAGCCGTATTCAGGATGTTGTTCTTAATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD192055             [                                                                                                                                                                                                                                                                                         GAAGCCGAATCCAAAGAAGTAAGACTAACGTTGATGGAAGAAATATTGCTGTTGGGACTAAAAGATCGAGAAGGTTACTTATCATTTTGGAATGATAGTGTATGTTGTGGACTCCGAGGATGCATACTTGTTGAACTTGGTCTCAGAAATCGAATTGGACTTGAGCCGAGTGGGATGCGTCGTAGGAACCTGTCTTCTAGGTGTATTGTTGTCAAAAAGAGCGTACCGACTGGTGACGCATTGTTAGATGAGGCTCTCAAACATATCAGAGATAACAAGCCTGAAAATACGAAGACGTGGATTGAATATCTCAGCGGTGAAACATGGAACCCATTCAAATTACCATTACAGCTCCGCAATGTCAGGGAAAGGATAGCAAAAAATCTCGTAGAAAAACGCATATGCACAACAGANAAACAGAACTTTATCCTTTTTGATATGATGACACACCCCTTAGTAGACCTTGGGAGTAAAAAACGCGTAATTAGCCGTATTCAGGATGTTGTTCTTAATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD154501             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATATCTCAGCGGTGAAACATGGAACCCATTCAAATTACCATTACAGCTCCGCAATGTCAGGGAAAGGATAGCAAAAAATCTCGTAGAAAAACGCATATGCACAACAGAAAAACAGAACTTTATCCTTTTTGATATGATGACACACCCCTTAGTAGACCTTGGGAGTAAAAAACGCGTAATTAGCCGTATTCAGGATGTTGTTCTTAATAAATGGAGCACAGATGTTCAAAAAGTTGATAAGCGACTACTCTCTCTCGTGCTCTTGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD129296             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     aaatccgnaGTTGTTCTTAATAAA GGAGCACAGA GTTC AAAAGTTGATAAGCGACTACTCTCTCTCGTGCTCTTGTCTCACTATTCTGATGTCCTAGAAAGTGCTTTACAACATCTTCCAGACAATGTTTATGATCTTGCCAGAAAGCGTATTGATGATGCTCTCCAAATGGACTTCTTTGCAGAGGCCAATAAAGAAGGTTCTTGTGAAATGTTGTGGGCAGTCATGGCTGCTCTTAATTCATAAAAACCAAATTACCAAATATCTTGGCTGTGATTGTTTGTGTtaca                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD168232             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AATAAATGGAGCACAGATGTTCAAAAAGTTGATAAGCGACTACTCTCTCTCGTGCTCTTGTCTCACTATTCTGATGTCCTAGAAAGTGCTTCACAACATCTTCCAGACAATGTTTATGATCTTGCCAGAAAGCGTATTGATGATGCTCTCCAAATGGACTTCTTTGCAGAGGCCAATAAAGAAGGTTCTTGTGAAATGTTGTGGGCAGTCATGGCTGCTCTTAATTCATAAAAACCAAATTACCAAATATCTTGGCTGTGATTATTTGTGTGAAGCTCCACCTCGCTATTTTCATGCAACCTTTAATTTACAATGACGTAGCTAACATTTGTATTTTATACGAAACAGTTGAGTTAATATCGAATCAGATCTTTCCACAATGTTTATTCACACTGTGTGGTTTAATTTTCCATGGTTCACTTTGCA                                                                                                                                                                                                                                           ]
[-] EMBL CD074177             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACTCTCTCTCGTGCTCTTGTCTCACTATTCTGATGTCCTAGAAAGTGCTTTACAACATCTTCCAGACAATGTTTATGATCTTGCCAGAAAGCGTATTGATGATGCTCTCCAAATGGACTTCTTTGCAGAGGCCAATAAAGAAGGTTCTTGTGAAATGTTGTGGGCAGTCATGGCTGCTCTTAATTCATAAAAACCAAATTACCAAATATCTTGGCTGTGATTATTTGTGTGAAGCTCCACCTCGCTATTTTCATGCAACCTTTAATTTACAATGACGTAGCTAACTTTTGTATTTTATACGAAACAGTTGAGTTAATATCGAATCAGATCTTTCCACAATGTTTATTCACACTGTGTGGTTTAATTTTCCATGGTTCACTTTGCAAACTTTTCTTTCACTGATTTGGTTCACCTTCCTAATTTAGGGAATTTGAAGACCTATTGATCTCTAATTTTTTTTAGTCTTAGTACATATTTATACACCGCTAAGACTAAAAATTCTGTAAAGATGCGTCACTTCCTACTTAACACCATCTCCATAAATATTTTAAGAAAACTCAAGGTGGTGTCCATGTTATGTACATCTCTGCCAATCTATTCAATAAAAA            ]
[-] EMBL CD137861             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCACCTCGCTATTTTCATGCAACCTTTAATTTACAATGACGTAGCTAACTTTTGTATTTTATACGAAACAGTTGAGTTAATATCGAATCAGATCTTTCCACAATGTTTATTCACACTGTGTGGTTTAATTTTCCATGGTTCACTTTGCAAACTTTTCTTTCACTGATTTGGTTCACCTTCCTAATTTAGGGAATTTGAAGACCTATTGATCTCTAATTTTTTTTAGTCTTAGTACATAT                                                                                                                                                 ]
[+] EMBL AA559377             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gagAGAACTA  G TCTCGAGTTTTTTTTAGTCTTAGTACATATTTATACACCGCTAAAACTAAAAATTCTGTAAANATGCGTCACTTCCTACTTAACACCATCTCCATAAATATTTTAANAAAACTCAGGGTGGTGTCCAT TTATGTACATCTCTGCCGATCTATTCAATAAAAATTTAAAATGAAN]




>consensus_10430#0
AGCCAAGNATTTGGCACGAGGGCTTTTNTGTCTCAAAATTTAGTGCTGAAGCTAAAGTTT
TGTCCTAAAAGTAGTTACCTAACAGAGTGATCAAAATAACACTGACCAAAGTAGAACTTT
TAAACAGAATAAAGGGCATTTGAATTCATTATTTACCCAATCAATTAAATTTAAGCAGAT
GACCGAAACAGAAGAGGCGGTCATCCATCGGCGTAATGTTGTAAAGGAAAACAGTAACCT
ACCGGGAACTACAGATAATGTTGATGATGAACCAGAATCTGAAGCCGAATCCAAAGAAGT
AAGACTAACGTTGATGGAAGAAATATTGCTGTTGGGACTAAAAGATCGAGAAGGATACTT
ATCATTTTGGAATGATAGTGTATGTTGTGGACTCCGAGGATGCATACTTGTTGAACTTGG
TCTCAGAAATCGAATTGGACTTGAGCCGAGTGGGATGCGTCGTAGGAACCTGTCTTCTAG
GTGTATTGTTGTCAAAAAGAGCGTACCGACTGGTGACGCATTGTTAGATGAGGCTCTCAA
ACATATCAGAGATAACAAGCCTGAAAATACGAAGACGTGGATTGAATATCTCAGCGGTGA
AACATGGAACCCATTCAAATTACCATTACAGCTCCGCAATGTCAGGGAAAGGATAGCAAA
AAATCTCGTAGAAAAACGCATATGCACAACAGAAAAACAGAACTTTATCCTTTTTGATAT
GATGACACACCCCTTAGTAGACCTTGGGAGTAAAAAACGCGTAATTAGCCGTATTCAGGA
TGTTGTTCTTAATAAATGGAGCACAGATGTTCAAAAAGTTGATAAGCGACTACTCTCTCT
CGTGCTCTTGTCTCACTATTCTGATGTCCTAGAAAGTGCTTTACAACATCTTCCAGACAA
TGTTTATGATCTTGCCAGAAAGCGTATTGATGATGCTCTCCAAATGGACTTCTTTGCAGA
GGCCAATAAAGAAGGTTCTTGTGAAATGTTGTGGGCAGTCATGGCTGCTCTTAATTCATA
AAAACCAAATTACCAAATATCTTGGCTGTGATTATTTGTGTGAAGCTCCACCTCGCTATT
TTCATGCAACCTTTAATTTACAATGACGTAGCTAACTTTTGTATTTTATACGAAACAGTT
GAGTTAATATCGAATCAGATCTTTCCACAATGTTTATTCACACTGTGTGGTTTAATTTTC
CATGGTTCACTTTGCAAACTTTTCTTTCACTGATTTGGTTCACCTTCCTAATTTAGGGAA
TTTGAAGACCTATTGATCTCTAATTTTTTTTAGTCTTAGTACATATTTATACACCGCTAA
GACTAAAAATTCTGTAAAGATGCGTCACTTCCTACTTAACACCATCTCCATAAATATTTT
AAGAAAACTCAAGGTGGTGTCCATGTTATGTACATCTCTGCCAATCTATTCAATAAAAAT
TTAAAATGAAN

consensusID : consensus_10430#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 500
fasta sequence

                              [ATCGGCACGAGGGGAACCCATTCAAATTACCATTACAGCTCCGCAATGTCAGGGAAAGGATAGCAAAAAATCTCGTAGAAAAACGCATATGCACAACAGAAAAACAGAACTTTATCCTTTTTGATATGATGACACACCCCTTAGTAGACCTTGGGAGTAAAAAACGCGTAATTAGCCGTATTCAGGATGTTGTTCTTAATAAATGGAGCACAGATGTTCAAAAAGTTGATAAGCGACTACTCTCTCTCGTGCTCTTGTCTCACTATTCTGATGTCCTAGAAAGTGCTTTACAACATCTTCCAGACAATGTTTATGATCTTGCCAGAAAGCGTATTGATGATGCTCTCCAAATGGACTTCTTTGCAGAGGCCAATAAAGAAGGTTCTTGTGAAATGTTGTGGGCAGTCATGGCTGCTCTTAATTCATAAAAACCAAATTTACCAAATATCTTGGCTGTGATTATTTGTGTGAAGCTCCACCTCGCTATTTTCATGCAACCT]

[+] EMBL CD077371             [ATCGGCACGAGGGGAACCCATTCAAATTACCATTACAGCTCCGCAATGTCAGGGAAAGGATAGCAAAAAATCTCGTAGAAAAACGCATATGCACAACAGAAAAACAGAACTTTATCCTTTTTGATATGATGACACACCCCTTAGTAGACCTTGGGAGTAAAAAACGCGTAATTAGCCGTATTCAGGATGTTGTTCTTAATAAATGGAGCACAGATGTTCAAAAAGTTGATAAGCGACTACTCTCTCTCGTGCTCTTGTCTCACTATTCTGATGTCCTAGAAAGTGCTTTACAACATCTTCCAGACAATGTTTATGATCTTGCCAGAAAGCGTATTGATGATGCTCTCCAAATGGACTTCTTTGCAGAGGCCAATAAAGAAGGTTCTTGTGAAATGTTGTGGGCAGTCATGGCTGCTCTTAATTCATAAAAACCAAATTTACCAAATATCTTGGCTGTGATTATTTGTGTGAAGCTCCACCTCGCTATTTTCATGCAACCT]
[+] EMBL CD140350             [                                                                                         TGCACAACAGAAAAACAGAACTTTATCCTTTTTGATATGATGACACACCCCTTAGTAGACCTTGGGAGTAAAAAACGCGTAATTAGCCGTATTCAGGATGTTGTTCTTAATAAATGGAGCACAGATGTTCAAAAAGTTGATAAGCGACTACTCTCTCTCGTGCTCTTGTCTCACTATTCTGATGTCCTAGAAAGTGCTTTACAACATCTTCCAGACAATGTTTATGATCTTGCCAGAAAGCGTATTGATGATGCTCTCCAAATGGACTTCTTTGCAGAGGCCA                                                                                                                                ]
[-] EMBL CD196399             [                                                                                          GCACAACAGAAAAACAGAACTTTATCCTTTTTGATATGATGACACACCCCTTAGTAGACCTTGGGAGTAAAAAACGCGTAATTAGCCGTATTCAGGATGTTGTTCTTAATAAATGGAGCACAGATGTTCAAAAAGTTGATAAGCGACTACTCTCTCTCGTGCTCTTGTCTCACTATTCTGATGTCCTAGAAAGTGCTTTACAACATCTTCCAGACAATGTTTATGATCTTGCCAGAAAGCGTATTGATGATGCTCTCCAAATGGACTTCTTTGCAGAGGCCAA                                                                                                                               ]




>consensus_10430#1
ATCGGCACGAGGGGAACCCATTCAAATTACCATTACAGCTCCGCAATGTCAGGGAAAGGA
TAGCAAAAAATCTCGTAGAAAAACGCATATGCACAACAGAAAAACAGAACTTTATCCTTT
TTGATATGATGACACACCCCTTAGTAGACCTTGGGAGTAAAAAACGCGTAATTAGCCGTA
TTCAGGATGTTGTTCTTAATAAATGGAGCACAGATGTTCAAAAAGTTGATAAGCGACTAC
TCTCTCTCGTGCTCTTGTCTCACTATTCTGATGTCCTAGAAAGTGCTTTACAACATCTTC
CAGACAATGTTTATGATCTTGCCAGAAAGCGTATTGATGATGCTCTCCAAATGGACTTCT
TTGCAGAGGCCAATAAAGAAGGTTCTTGTGAAATGTTGTGGGCAGTCATGGCTGCTCTTA
ATTCATAAAAACCAAATTTACCAAATATCTTGGCTGTGATTATTTGTGTGAAGCTCCACC
TCGCTATTTTCATGCAACCT

consensusID : consensus_10430#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 372
fasta sequence

                              [ATCGAGAAGTTGGTCTGTTTTAGTAATTTATAAAACGCCACAGGGATACTTATCATTTTGGAATGATAGTGTATGTTGTGGACTCCGAGGATGCATACTTGTTGAACTTGGTCTCAGAAATCGAATTGGACTTGAGCCGAGTGGGATGCGTCGTAGGAACCTGTCTTTTAGGTGTATTGTTGTCAAAAAGAGCGTACCGACTGGTGACGCATTGTTAGATGAGGCTTTCCAACATATCAGAGATAACCAGCCTGTGAAATACGAAGACGTGGATTGAATATATCAACGGTGAAACAAGGAACCCACTTCAATTACCACTACAGCTCCGCAATGTCACGGAAAGGATAGCGCAAAATCTCGTAGAGAAACGCG]

[-] EMBL CD202432             [ATCGAGAAGTTGGTCTGTTTTAGTAATTTATAAAACGCCACAGGGATACTTATCATTTTGGAATGATAGTGTATGTTGTGGACTCCGAGGATGCATACTTGTTGAACTTGGTCTCAGAAATCGAATTGGACTTGAGCCGAGTGGGATGCGTCGTAGGAACCTGTCTTTTAGGTGTATTGTTGTCAAAAAGAGCGTACCGACTGGTGACGCATTGTTAGATGAGGCTTTCCAACATATCAGAGATAACCAGCCTGTGAAATACGAAGACGTGGATTGAATATATCAACGGTGAAACAAGGAACCCACTTCAATTACCACTACAGCTCCGCAATGTCACGGAAAGGATAGCGCAAAATCTCGTAGAGAAACGCG]




>consensus_10430#2
ATCGAGAAGTTGGTCTGTTTTAGTAATTTATAAAACGCCACAGGGATACTTATCATTTTG
GAATGATAGTGTATGTTGTGGACTCCGAGGATGCATACTTGTTGAACTTGGTCTCAGAAA
TCGAATTGGACTTGAGCCGAGTGGGATGCGTCGTAGGAACCTGTCTTTTAGGTGTATTGT
TGTCAAAAAGAGCGTACCGACTGGTGACGCATTGTTAGATGAGGCTTTCCAACATATCAG
AGATAACCAGCCTGTGAAATACGAAGACGTGGATTGAATATATCAACGGTGAAACAAGGA
ACCCACTTCAATTACCACTACAGCTCCGCAATGTCACGGAAAGGATAGCGCAAAATCTCG
TAGAGAAACGCG

consensusID : consensus_10430#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 264
fasta sequence

                              [TGCGGCGCGCGTTGGTTGGGACTTACAATCGTATGAGGCTTGGTTTTGGCTTATTTGCACAATAGGACCCTTTTTGTCTCAAAATTTAGTGCTGAAGCTAAAGTTTTGTCCTAAAAGTAGTTACCTAACAGAGTGATCAAAATAACACTGACCAAAGTAGAACTTTTAAACAGAATAAAGGGCATTTGAATTCATTATTTACCCAATCAATTAAATNTAAGCAGATGACCGAAACAGAAGAGGCGGTCATCCATCGGCGTAATG]

[+] EMBL CD144317             [TGCGGCGCGCGTTGGTTGGGACTTACAATCGTATGAGGCTTGGTTTTGGCTTATTTGCACAATAGGACCCTTTTTGTCTCAAAATTTAGTGCTGAAGCTAAAGTTTTGTCCTAAAAGTAGTTACCTAACAGAGTGATCAAAATAACACTGACCAAAGTAGAACTTTTAAACAGAATAAAGGGCATTTGAATTCATTATTTACCCAATCAATTAAATNTAAGCAGATGACCGAAACAGAAGAGGCGGTCATCCATCGGCGTAATG]




>consensus_10430#3
TGCGGCGCGCGTTGGTTGGGACTTACAATCGTATGAGGCTTGGTTTTGGCTTATTTGCAC
AATAGGACCCTTTTTGTCTCAAAATTTAGTGCTGAAGCTAAAGTTTTGTCCTAAAAGTAG
TTACCTAACAGAGTGATCAAAATAACACTGACCAAAGTAGAACTTTTAAACAGAATAAAG
GGCATTTGAATTCATTATTTACCCAATCAATTAAATNTAAGCAGATGACCGAAACAGAAG
AGGCGGTCATCCATCGGCGTAATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10430#0      AGCCAAGNATTTGGCACGAGGGCTTTTNTGTCTCAAAATTTAGTGCTGAAGCTAAAGTTT 60
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      TGTCCTAAAAGTAGTTACCTAACAGAGTGATCAAAATAACACTGACCAAAGTAGAACTTT 120
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      TAAACAGAATAAAGGGCATTTGAATTCATTATTTACCCAATCAATTAAATTTAAGCAGAT 180
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      GACCGAAACAGAAGAGGCGGTCATCCATCGGCGTAATGTTGTAAAGGAAAACAGTAACCT 240
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      ACCGGGAACTACAGATAATGTTGATGATGAACCAGAATCTGAAGCCGAATCCAAAGAAGT 300
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      AAGACTAACGTTGATGGAAGAAATATTGCTGTTGGGACTAAAAGATCGAGAAGGATACTT 360
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      ATCATTTTGGAATGATAGTGTATGTTGTGGACTCCGAGGATGCATACTTGTTGAACTTGG 420
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      TCTCAGAAATCGAATTGGACTTGAGCCGAGTGGGATGCGTCGTAGGAACCTGTCTTCTAG 480
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      GTGTATTGTTGTCAAAAAGAGCGTACCGACTGGTGACGCATTGTTAGATGAGGCTCTCAA 540
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      ACATATCAGAGATAACAAGCCTGAAAATACGAAGACGTGGATTGAATATCTCAGCGGTGA 600
consensus_10430#1      ----------------------------------------------------ATCGGCAC 8
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      AACATGGAACCCATTCAAATTACCATTACAGCTCCGCAATGTCAGGGAAAGGATAGC-AA 659
consensus_10430#1      GA-GGGGAACCCATTCAAATTACCATTACAGCTCCGCAATGTCAGGGAAAGGATAGC-AA 66
consensus_10430#2      -------------ATCGAGAAGTTGGTCTGTTTTAGTAATTTATAAAACGCCACAGG-GA 46
consensus_10430#3      -----------------------------------------TGCGGCGCGCGTTGGTTGG 19
                                                                *             *    

consensus_10430#0      AAAATCTCGTAGAAAAACGCATATGCACAACAGAAAAACAGAACTT-TATCCTTTTTGA- 717
consensus_10430#1      AAAATCTCGTAGAAAAACGCATATGCACAACAGAAAAACAGAACTT-TATCCTTTTTGA- 124
consensus_10430#2      TACTTATCATTTTGGAATGATAGTGTATGTTGTGGACTCCGAGGATGCATACTTGTTGAA 106
consensus_10430#3      GACTTACAATCGTATGAGGCTTGGTTTTGGCTTATTTGCACAATAG-GACCCTTTTTGTC 78
                        *  *    *      * *                   *  *      *  *** ***  

consensus_10430#0      TATGATGACACACCCCTTAGTAGACCTTGG--GAGTAAAAAACG-CGTAATTAGCCGTAT 774
consensus_10430#1      TATGATGACACACCCCTTAGTAGACCTTGG--GAGTAAAAAACG-CGTAATTAGCCGTAT 181
consensus_10430#2      CTTGGTCTCAGAAATCGAATTGGACTTGAGCCGAGTGGGATGCGTCGTAGGAACCTGTCT 166
consensus_10430#3      TCAAAATTTAGTGCTGAAGCTAAAGTTTTGTCCTAAAAGTAGTTACCTAACAGAGTG-AT 137
                                *          *  *  *  *               * **       *  *

consensus_10430#0      TCAGGATGT--TGTTCTTAATAAATGGAGCACAGATGTTCAAAAAGTTGATAAGCGACTA 832
consensus_10430#1      TCAGGATGT--TGTTCTTAATAAATGGAGCACAGATGTTCAAAAAGTTGATAAGCGACTA 239
consensus_10430#2      TTTAGGTGTATTGTTGTCAA-AAAGAGCGTACCGACTGGTGACGCATTGTTAGATGAG-G 224
consensus_10430#3      CAAAATAACACTGACCAAAGTAGAACTTTTAAACAGAATAAAGGGCATTTGAATTCATTA 197
                                  **     *  * *      *   *      *     *   *    *   

consensus_10430#0      CTCTCTCTCGTGCTCTTGTCTCACTATTCTG--ATGTCCTAGAAAGTGCTTTACAACATC 890
consensus_10430#1      CTCTCTCTCGTGCTCTTGTCTCACTATTCTG--ATGTCCTAGAAAGTGCTTTACAACATC 297
consensus_10430#2      CTTTCCAACATA-TCAGAGATAACCAGCCTGTGAAATACGAAGACGTGGATTG-AATATA 282
consensus_10430#3      TTTACCCAATCAATTAAATNTAAGCAGATGACCGAAACAGAAGAGGCGGTC----ATCCA 253
                        *  *        *      * *  *              *  * * *       *    

consensus_10430#0      TTCCAGACAATGTTTATGATCTTGCCAGAAAGCGTATTGATGATGCTCTCCAAATGGACT 950
consensus_10430#1      TTCCAGACAATGTTTATGATCTTGCCAGAAAGCGTATTGATGATGCTCTCCAAATGGACT 357
consensus_10430#2      TCAACGGTGA-AACAAGGAACCCACTTCAA---TTACCACTACAGCTCCGCAA------T 332
consensus_10430#3      TCGGCG-TAATG------------------------------------------------ 264
                       *    *   *                                                  

consensus_10430#0      TCTTTGCAGAGGCCAATAAAGAAGGTTCTTGTGAAATGTTGTGGGCAGTCATGGCTGCTC 1010
consensus_10430#1      TCTTTGCAGAGGCCAATAAAGAAGGTTCTTGTGAAATGTTGTGGGCAGTCATGGCTGCTC 417
consensus_10430#2      GTCACGGAAAGGATAGCGCAAAATCTCGTAGAGAAACGCG-------------------- 372
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      TTAATTCATAAAAACCAAATT-ACCAAATATCTTGGCTGTGATTATTTGTGTGAAGCTCC 1069
consensus_10430#1      TTAATTCATAAAAACCAAATTTACCAAATATCTTGGCTGTGATTATTTGTGTGAAGCTCC 477
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      ACCTCGCTATTTTCATGCAACCTTTAATTTACAATGACGTAGCTAACTTTTGTATTTTAT 1129
consensus_10430#1      ACCTCGCTATTTTCATGCAACCT------------------------------------- 500
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      ACGAAACAGTTGAGTTAATATCGAATCAGATCTTTCCACAATGTTTATTCACACTGTGTG 1189
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      GTTTAATTTTCCATGGTTCACTTTGCAAACTTTTCTTTCACTGATTTGGTTCACCTTCCT 1249
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      AATTTAGGGAATTTGAAGACCTATTGATCTCTAATTTTTTTTAGTCTTAGTACATATTTA 1309
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      TACACCGCTAAGACTAAAAATTCTGTAAAGATGCGTCACTTCCTACTTAACACCATCTCC 1369
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      ATAAATATTTTAAGAAAACTCAAGGTGGTGTCCATGTTATGTACATCTCTGCCAATCTAT 1429
consensus_10430#1      ------------------------------------------------------------
consensus_10430#2      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
                                                                                   

consensus_10430#0      TCAATAAAAATTTAAAATGAAN 1451
consensus_10430#1      ----------------------
consensus_10430#2      ----------------------
consensus_10430#3      ----------------------