cluster # 10434

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Schistosoma mansoni
cluster # 10434 cluster # 10434 Sequences # 16 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10434#0 length = 881 sequences # 11
consensus_10434#1 length = 627 sequences # 1

consensus_10434#2 length = 581 sequences # 3
consensus_10434#3 length = 292 sequences # 1

consensusID : consensus_10434#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 881
fasta sequence

                              [AAGAGTCTTCACCAGTGGAGCAGACTTCAGAAGTAGTGCCAACAATCTTACTTTCGTTATGTAACATTTCTTCCCACAGGTCTAACTGTGGTTCTATTGAGTGCCACAGTTGACGATATCTGCTAAGCATATCTGCTAGC-AAAGCCAAAGAAGGTTCTGGTGTGGAATTTATTGAATTATCTACAGTTTCTGTGTTATTTTCTTCCTCAGCTTTCGGTCGCTCATCACTATTAAGATTTTCGATTTCACCTGGGGGAATTTTATCATATTCATCGGTATCCACTAACATGGGTGATGATTCTCGTTTGAACGTTTTATTTACATTATCACAAGCATTAACAATATCATCCTTCTGAACGTCACGTTGGTTTGTGGAATGCGATGTGGAAGGAGATGGATCAGTTTCTGATGGTTTTGCCTTGTTATTATGAGAGTCTTTATAGGATATTTGGGATATTTTCTGAGTAAGGCGAGTGGCTTGGCGATGCAATTTATTGAAAGTATTTTCTCGTAAGGTTATTAAAGAATGATCATGAAGGGAGTCGCCAGAAAGATCACCATCAC--GAGAGAGAGAGGTTAGTAGCTCTGCTCAGCTCGCTAACACCACTTAGTATCCCAGAGGTAATGTCTTGTATAGCTTGTTGCATGCTTATACCTCCAAACGTAAATCCGCCCAGACCAGAACCACCCATGTTAGCTGTTGAGTCAGCTGTTGCAGTTCCAGAAGATGATTGTTCTCTGGTGGTTGGAGGGGGCCTGACAACGAGATGTACCACTTTACCTTGAATACCGCATTCCAACAAGGTCTGTTCATTGTTCAGAACTCTTCCTTGAAAAATTAGGCGTTGTTGTTCAGCTGCGATGTTCAACTTCTGTTCTAT]

[-] EMBL CD096460             [AAGAGTCTTCACCAGTGGAGCAGACTTCAGAAGTAGTGCCAACAATCTTACTTTCGTTATGTAACATTTCTTCCCACAGGTCTAACTGTGGTTCTATTGAGTGCCACAGTTGACGATATCTGCTAAGCATATCTGCTAGC AAAGCCAAAGAAGGTTCTGGTGTGGAATTTATTGAATTATCTACAGTTTCTGTGTTATTTTCTTCCTCAGCTTTCGGTCGCTCATCACTATTAAGATTTTCGATTTCACCTGGGGGAATTTTATCATATTCATCGGTATCCACTAACATGGGTGATGATTCTCGTTTGAACGTTTTATTTACATTATCACAAGTATTAACAATATCATCCTTCTGAACGTCACGTTGGTTTGTGGAATGCGATGTGGAAGGAGATGGATCAGTTTCTGATGGTTTTGCCTTGTTATTATGAGAGTCTTTATAGGATATTTGGGATATTTTCTGAGTAAGGCGAGTGGCTTGGCGATGCAATTTATTGAAAGTATTTTCTCGTAAGGTTATTAAAGAATGATCATGAAGGGAGTCGCCAGAAAGATCACCATCAC  GAGAGAGAGAGGTTAGTAGCTCTGCTC                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD194471             [                          TCAGAAGTAGTGCCAACAATCTTACTTTCGTTATGTAACATTTCTTCCCACAGGTCTAACTGTGGTTCTATTGAGTGCCACAGTTGACGATATCTGCTAAGCATATCTGCTAGC AAAGCCAAAGAAGGTTCTGGTGTGGAATTTATTGAATTATCTACAGTTTCTGTGTTATTTTCTTCCTCAGCTTTCGGTCGCTCATCACTATTAAGATTTTCGATTTCACCTGGGGGAATTTTATCATATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD194356             [                                            ATCTTACTTTCGTTATGTAACATTTCTTCCCACAGGTCTAACTGTGGTTCTATTGAGTGCCACAGTTGACGATATCTGCTAAGCATATCTGCTAGCAAAAGCCAAAGAAGGTTCTGGTGTGGAATTTATTGAATTATCTACAGTTTCTGTGTTATTTTCTTCCTCAGCTTCCGGTCGCTCATCACTATTAAGATTTTCGATTTCACCTGGGGGAATTTTATCATATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD194441             [                                                TACTTTCGTTATGTGACATTTCTTCCCACAGGTCTAACTGTGGTTCTATTGAGTGCCACAGTTGACGATATCTGCTAAGCATATCTGCTAGC AAAGCCAAAGAAGGTTCTGGTGTGGAATTTATTGAATTATCTACAGTTTCTGTGTTATTTTCTTCCTCAGCTTTCGGTCGCTCATCACTATTAAGATTTTCGATTTCACCTGGGGGAATTTTATCATATTCATCGGTATCCACTAACATGGGTGATGATTCTCGTTTGAACGTTTTATTTACATTATCACAAGCATTAACAATATCATCCTTCTGAACGTCACGTTGGTTTGTGGAATGCGATGTGGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD194523             [                                                TACTTTCGTTATGTAACATTTCTTCCCACAGGTCTAACTGTGGTTCTATTGAGTGCCACAGTTGACGATATCTGCTAAGCATATCTGCTAGC AAAGCCAAAGAAGGTTCTGGTGTGGAATTTATTGAATTATCTACAGTTTCTGTGTTATTTTCTTCCTCAGCTTTCGGTCGCTCATCACTATTAAGATTTTCGATTTCACCTGGGGGAATTTCATCATATTCATCGGTATCCACTAACATGGGTGATGATTCTCGTTTGAACGTTTTATTTACATTATCACAAGCATTAACAATATCATCCTTCTGAACGTCACGTTGGTTTGTGGAATGCGATGTGGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD194390             [                                                 tCTTTCGTTATGTAACATTTCTTCCCACAGGTCTAACTGTGGTTCTATTGAGTGCCACAGTTGACGATATCTGCTAAGCATATCTGCTAGC AAAGCCAAAGAAGGTTCCGGTGTGGAATTTATTGAATTATCTACAGTTTCTGTGTTATTTTCTTCCTCAGCTTTCGGTCGCTCATCACTATTAAGATTTTCGATTTCACCTGGGGGAATTTTATCATATTCATCGGTATCCACTAACATGGGTGATGATTCTCGTTTGAACGTTTTATTTACATTATCACAAGCATTAACAATATCATCCTTCTGAACGTCACGTTGGTTTGTGGAATGCGATGTGGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD186150             [                                                                                                                                                                                                                                                                         CATATTCATCGGTATCCACTAACATGGGTGATGATTCTCGTTTGAACGTTTTATTTACATTATCACAAGCATTAACAATATCATCCTTCTGAACGTCACGTTGGTTTGTGGAATGCGATGTGGAAGGAGATGGATCAGTTTCTGATGGTTTTGCCTTGTTATTATGAGAGTCTTTATAGGATATTTGGGATATTTTCTGAGTAAGGCGAGTGGCTTGGCGATGCAATTTATTGAAAGTATTTTCTCGTAAGGTTATTAAAGAATGATCATGAAGGGAGTCGCCAGAAAGATCACCATCAC  GAGAGAGAGAGGTTAGTAGCTCTGCTCAGCTCGCTAACACC                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD122260             [                                                                                                                                                                                                                                                                                                                                                                                                                 AGTTTCTGATGGTTTTGCCTTGTTATTATGAAAGTCTTTATAGGATATTTGGGATATTTTCTGAGTAAGGCGAGTGGCTTGGCGATGCAATTTATTGAAAGTATTTTCTCGTAAGGTTATTAAAGAATGATCATGAAGGGAGTCGCCAGAAAGATCACCATCACGAGAGAGAGAGAGGTTAGTAGCTCTGCTCAGCTCGCTAACACCACTTAGTATCCCAGAGGTAATGTCTTGTATAGCTTGTTGCATGCTTATACCTCCAAACGTAAATCCGCCCAGACCAGAACCACCCATGTTAGCTGTTGAGTCAGCTGTTGCAGTTCCAGAAGATGATTGTTCTCTGGTGGTTGGAGGGGG                                                                                                                              ]
[+] EMBL CD122343             [                                                                                                                                                                                                                                                                                                                                                                                                                 AGTTTCTGATGGTTTTGCCTTGTTATTATGAGAGTCTTTATAGGATATTTGGGATATTTTCTGAGTAAGGCGAGTGGCTTGGCGATGCAATTTATTGAAAGTATTTTCTCGTAAGGTTATTAAAGAATGATCATGAAGGGAGTCGCCAGAAAGATCACCATCACGAGAGAGAGAGAGGTTAGTAGCTCTGCTCAGCTCGCTAACACCACTTAGTATCCCAGAGGTAATGTCTTGTATAGCTTGTTGCATGCTTATACCTCCAAACGTAAATCCGCCCAGACCAGAACCACCCATGTTAGCTGTTGAGTCAGCTGTTGCAGTTCCAGAAGATGATTGTTCTCTGGTGGTTGGAGGGGG                                                                                                                              ]
[-] EMBL CD122397             [                                                                                                                                                                                                                                                                                                                                                                                                                  GTTTCTGATGGTTTTGCCTTGTTATTATGAGAGTCTTTATAGGATATTTGGGATATTTTCTGAGTAAGGCGAGTGGCTTGGCGATGCAATTTATTGAAAGTATTTTCTCGTAAGGTTATTAAAGAATGATCATGAAGGGAGTCGCCAGAAAGATCACCATCAC  GAGAGAGAGAGGTTAGTAGCTCTGCTCAGCTCGCTAACACCACTTAGTATCCCAGAGGTAATGTCTTGTATAGCTTGTTGCATGCTTATACCTCCAAACGTAAATCCGCCCAGACCAGAACCACCCATGTTAGCTGTTGAGTCAGCTGTTGCAGTTCCAGAAGATGATTGTTCTCTGGTGGTTGGAGGGGGC                                                                                                                             ]
[+] EMBL CD155651             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGATCACCATCACGAGAGAGAGAGAGGTTAGTAGCTCTGCTCAGCTCGCTAACACCACTTAGTATCCCAGAGGTAATGTCTTGTATAGCTTGTTGCATGCTTATACCTCCAAACGTAAATCCGCCCAGACCAGAACCACCCATGTTAGCTGTTGAGTCAGCTGTTGCAGTTCCAGAAGATGATTGTTCTCTGGTAGTTGGAGGGGGCCTGACAACGAGATGTACCACTTTACCTTGAATACCGCATTCCAACAAGGTCTGTTCATTGTTCAGAACTCTTCCTTGAAAAATTAGGCGTTGTTGTTCAGCTGCGATGTTCAACTTCTGTTCTAT]




>consensus_10434#0
AAGAGTCTTCACCAGTGGAGCAGACTTCAGAAGTAGTGCCAACAATCTTACTTTCGTTAT
GTAACATTTCTTCCCACAGGTCTAACTGTGGTTCTATTGAGTGCCACAGTTGACGATATC
TGCTAAGCATATCTGCTAGCAAAGCCAAAGAAGGTTCTGGTGTGGAATTTATTGAATTAT
CTACAGTTTCTGTGTTATTTTCTTCCTCAGCTTTCGGTCGCTCATCACTATTAAGATTTT
CGATTTCACCTGGGGGAATTTTATCATATTCATCGGTATCCACTAACATGGGTGATGATT
CTCGTTTGAACGTTTTATTTACATTATCACAAGCATTAACAATATCATCCTTCTGAACGT
CACGTTGGTTTGTGGAATGCGATGTGGAAGGAGATGGATCAGTTTCTGATGGTTTTGCCT
TGTTATTATGAGAGTCTTTATAGGATATTTGGGATATTTTCTGAGTAAGGCGAGTGGCTT
GGCGATGCAATTTATTGAAAGTATTTTCTCGTAAGGTTATTAAAGAATGATCATGAAGGG
AGTCGCCAGAAAGATCACCATCACGAGAGAGAGAGGTTAGTAGCTCTGCTCAGCTCGCTA
ACACCACTTAGTATCCCAGAGGTAATGTCTTGTATAGCTTGTTGCATGCTTATACCTCCA
AACGTAAATCCGCCCAGACCAGAACCACCCATGTTAGCTGTTGAGTCAGCTGTTGCAGTT
CCAGAAGATGATTGTTCTCTGGTGGTTGGAGGGGGCCTGACAACGAGATGTACCACTTTA
CCTTGAATACCGCATTCCAACAAGGTCTGTTCATTGTTCAGAACTCTTCCTTGAAAAATT
AGGCGTTGTTGTTCAGCTGCGATGTTCAACTTCTGTTCTAT

consensusID : consensus_10434#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 627
fasta sequence

                              [CGCCTAATTTTTCAAGGAAGAGTTCTGAACAATGAACAGACCTTGTTGGAATGCGGCAAGTTTTTGGTTACATTTTATTCATTTGTTAATCTTGTTACAACAAAACCGTCCTACCGGTATAAAAATATCCTTCATTTTATTCGGTTAGACACATTTAGCTAATCGGATTGTGACTCAAAATTTGACAGGCATCAAGCAAACACCATCAGTGATGCACGACTTCTTAGTATTTTTCAGTTCATTCGAATAGTTTATCTTTGTAAATTACTACACGAATTAGTAGAATATCAGTCTCCAGAAATTCAAACCACCTTAGTGTTCGTCACTCGTTACGTTAGCACTACCTCATTCTTGTATTGTGCTACTAGATTCATTACAACTGTCATAGCTACGCGGTGCTCGTACGTCGGCCTCTCAGTTTAAATAGTGTTTACATGTTATCCTGATTTATTCATGGCTTTGTTATATCTGGTCCTACTGATAGTATAATTCTAGTTNTGGTGCATTATGGGATTTTGAGCCAGTGAACATCATTACATTGTCTAACCGATTCAGTCCTAGNTACAACTGTTATTACAACTAATANGTCGTTATCAATAAACAGCAATGTGACAGGATTGCAAACTA]

[+] EMBL CD165447             [CGCCTAATTTTTCAAGGAAGAGTTCTGAACAATGAACAGACCTTGTTGGAATGCGGCAAGTTTTTGGTTACATTTTATTCATTTGTTAATCTTGTTACAACAAAACCGTCCTACCGGTATAAAAATATCCTTCATTTTATTCGGTTAGACACATTTAGCTAATCGGATTGTGACTCAAAATTTGACAGGCATCAAGCAAACACCATCAGTGATGCACGACTTCTTAGTATTTTTCAGTTCATTCGAATAGTTTATCTTTGTAAATTACTACACGAATTAGTAGAATATCAGTCTCCAGAAATTCAAACCACCTTAGTGTTCGTCACTCGTTACGTTAGCACTACCTCATTCTTGTATTGTGCTACTAGATTCATTACAACTGTCATAGCTACGCGGTGCTCGTACGTCGGCCTCTCAGTTTAAATAGTGTTTACATGTTATCCTGATTTATTCATGGCTTTGTTATATCTGGTCCTACTGATAGTATAATTCTAGTTNTGGTGCATTATGGGATTTTGAGCCAGTGAACATCATTACATTGTCTAACCGATTCAGTCCTAGNTACAACTGTTATTACAACTAATANGTCGTTATCAATAAACAGCAATGTGACAGGATTGCAAACTA]




>consensus_10434#1
CGCCTAATTTTTCAAGGAAGAGTTCTGAACAATGAACAGACCTTGTTGGAATGCGGCAAG
TTTTTGGTTACATTTTATTCATTTGTTAATCTTGTTACAACAAAACCGTCCTACCGGTAT
AAAAATATCCTTCATTTTATTCGGTTAGACACATTTAGCTAATCGGATTGTGACTCAAAA
TTTGACAGGCATCAAGCAAACACCATCAGTGATGCACGACTTCTTAGTATTTTTCAGTTC
ATTCGAATAGTTTATCTTTGTAAATTACTACACGAATTAGTAGAATATCAGTCTCCAGAA
ATTCAAACCACCTTAGTGTTCGTCACTCGTTACGTTAGCACTACCTCATTCTTGTATTGT
GCTACTAGATTCATTACAACTGTCATAGCTACGCGGTGCTCGTACGTCGGCCTCTCAGTT
TAAATAGTGTTTACATGTTATCCTGATTTATTCATGGCTTTGTTATATCTGGTCCTACTG
ATAGTATAATTCTAGTTNTGGTGCATTATGGGATTTTGAGCCAGTGAACATCATTACATT
GTCTAACCGATTCAGTCCTAGNTACAACTGTTATTACAACTAATANGTCGTTATCAATAA
ACAGCAATGTGACAGGATTGCAAACTA

consensusID : consensus_10434#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 581
fasta sequence

                              [AAAGGGAGAGCAGACTCTCTACACTCTCGGCCGTACCAGGGCATTTGGGGGCACCAATAGCGTGTCTGCAGATCCCAGATGACGGCTGCACAGTCCCAGTTGGGTACTAGCACTTTGTGGGTAGTTCTTTTTGTTCTAAGGTCGCCCTTTTTAAAATCCCTTTCTGTTTTGACAAGGCAGCATCACTGGAGATACTCGTTATCCAAAAAGGACGTTTTCTTTTCAACATATCCCAGTAAAGTTGGCCAAATGTCTGAACTTCAGACCATACCGGCGTTTGGCTGTTTAGTATGACTGATCGTTTCACTGGGACTCGGAGTCCACTGCATCATAGTGCACTCAATCTCAGACTGCAGGATCTCATCGATCTCACAGGCTATTATACCGTCAAAACCACACTGATTTCTTTTTTGGGACACCTTTCGTGATTTTTATGAAGTGGTTCACGTAACTGGTGTTTAAAATTGTAGGAAAATTTGGATATTGCTTAATTCAGTTTTCTTTGTGTCCAGGTATTCAAGGTAAAGTGGTACATCTCGTTGTCAGGCCCCCTCCAACTACCAGAGAACAATCATCTTCTG]

[-] EMBL CD126957             [AAAGGGAGAGCAGACTCTCTACACTCTCGGCCGTACCAGGGCATTTGGGGGCACCAATAGCGTGTCTGCAGATCCCAGATGACGGCTGCACAGTCCCAGTTGGGTACTAGCACTTTGTGGGTAGTTCTTTTTGTTCTAAGGTCGCCCTTTTTAAAATCCCTTTCTGTTTTGACAAGGCAGCATCACTGGAGATACTCGTTATCCAAAAAGGACGTTTTCTTTTCAACATATCCCAGTAAAGTTGGCCAAATGTCTGAACTTCAGACCATACCGGCGTTTGGCTGTTTAGTATGACTGATCGTTTCACTGGGACTCGGAG                                                                                                                                                                                                                                                                      ]
[+] EMBL CD183490             [                                                                                                             GCACTTTGTGGGTAGTTCTTTTTGTTCTAAGGTCGCCCTTTTTAAAATCCCTTTCTGTTTTGACAAGGCAGCATCACTGGAGATACTCGCTATCCAAAAAGGACGTTTTCTTTTCAACATATCCCAGTAAAGTTGGCCAAATGTCTGAACTTCAGACCATACCGGCGT                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD187549             [                                                                                                                                                                                                      TTATCCAAAAAGGACGTTTTCTTTTCAACTTATCCCAGTAAAGTTGGCCAAATGTCTGAACTTCAGACCATACCGGCGTTTGGCTGTTTAGTATGACTGATCGTTTCACTGGGACTCGGAGTCCACTGCATCATAGTGCACTCAATCTCAGACTGCAGGATCTCATCGATCTCACAGGCTATTATACCGTCAAAACCACACTGATTTCTTTTTTGGGACACCTTTCGTGATTTTTATGAAGTGGTTCACGTAACTGGTGTTTAAAATTGTAGGAAAATTTGGATATTGCTTAATTCAGTTTTCTTTGTGTCCAGGTATTCAAGGTAAAGTGGTACATCTCGTTGTCAGGCCCCCTCCAACTACCAGAGAACAATCATCTTCTG]




>consensus_10434#2
AAAGGGAGAGCAGACTCTCTACACTCTCGGCCGTACCAGGGCATTTGGGGGCACCAATAG
CGTGTCTGCAGATCCCAGATGACGGCTGCACAGTCCCAGTTGGGTACTAGCACTTTGTGG
GTAGTTCTTTTTGTTCTAAGGTCGCCCTTTTTAAAATCCCTTTCTGTTTTGACAAGGCAG
CATCACTGGAGATACTCGTTATCCAAAAAGGACGTTTTCTTTTCAACATATCCCAGTAAA
GTTGGCCAAATGTCTGAACTTCAGACCATACCGGCGTTTGGCTGTTTAGTATGACTGATC
GTTTCACTGGGACTCGGAGTCCACTGCATCATAGTGCACTCAATCTCAGACTGCAGGATC
TCATCGATCTCACAGGCTATTATACCGTCAAAACCACACTGATTTCTTTTTTGGGACACC
TTTCGTGATTTTTATGAAGTGGTTCACGTAACTGGTGTTTAAAATTGTAGGAAAATTTGG
ATATTGCTTAATTCAGTTTTCTTTGTGTCCAGGTATTCAAGGTAAAGTGGTACATCTCGT
TGTCAGGCCCCCTCCAACTACCAGAGAACAATCATCTTCTG

consensusID : consensus_10434#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 292
fasta sequence

                              [CCAGACCAGAACCACCGATGTTATCTGTTGAGTCAGCTGTTGCAGTTCCAGAAGATGATTGTTCTCTGGTAGTTGGAGGGGGCCTGACAACGAGATGTACCACTTTACCTTGAATACCTGGACACAAAGAAAACTGAATTAAGCAATATCCAAATTTTCCTACAATTTTAAACACCAGTTACGTGAACCACTTCATAAAAATCACGAAAGGTGTCCCAAAAAAGAAATCAGTGTGGTTTTGACGGTATAATAGCCTGTGAGATCGATGAGAGAGAGTGGACTGGGAAGAGGT]

[+] EMBL CD149748             [CCAGACCAGAACCACCGATGTTATCTGTTGAGTCAGCTGTTGCAGTTCCAGAAGATGATTGTTCTCTGGTAGTTGGAGGGGGCCTGACAACGAGATGTACCACTTTACCTTGAATACCTGGACACAAAGAAAACTGAATTAAGCAATATCCAAATTTTCCTACAATTTTAAACACCAGTTACGTGAACCACTTCATAAAAATCACGAAAGGTGTCCCAAAAAAGAAATCAGTGTGGTTTTGACGGTATAATAGCCTGTGAGATCGATGAGAGAGAGTGGACTGGGAAGAGGT]




>consensus_10434#3
CCAGACCAGAACCACCGATGTTATCTGTTGAGTCAGCTGTTGCAGTTCCAGAAGATGATT
GTTCTCTGGTAGTTGGAGGGGGCCTGACAACGAGATGTACCACTTTACCTTGAATACCTG
GACACAAAGAAAACTGAATTAAGCAATATCCAAATTTTCCTACAATTTTAAACACCAGTT
ACGTGAACCACTTCATAAAAATCACGAAAGGTGTCCCAAAAAAGAAATCAGTGTGGTTTT
GACGGTATAATAGCCTGTGAGATCGATGAGAGAGAGTGGACTGGGAAGAGGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10434#0      AAGAGTCTTCACCAGTGGAGCAGACTTCAGAAGTAGTGCCAACAATCTTACTTTCGTTAT 60
consensus_10434#3      ------------------------------------------------------------
consensus_10434#1      ------------------------------------------------------------
consensus_10434#2      ------------------------------------------------------------
                                                                                   

consensus_10434#0      GTAACATTTCTTCCCACAGGTCTAACTGTGGTTCTATTGAGTGCCACAGTTGACGATATC 120
consensus_10434#3      ------------------------------------------------------------
consensus_10434#1      ------------------------------------------------------------
consensus_10434#2      ------------------------------------------------------------
                                                                                   

consensus_10434#0      TGCTAAGCATATCTGCTAGCAAAGCCAAAGAAGGTTCTGGTGTGGAATTTATTGAATTAT 180
consensus_10434#3      ------------------------------------------------------------
consensus_10434#1      ------------------------------------------------------------
consensus_10434#2      ------------------------------------------------------------
                                                                                   

consensus_10434#0      CTACAGTTTCTGTGTTATTTTCTTCCTCAGCTTTCGGTCGCTCATCACTATTAAGATTTT 240
consensus_10434#3      ------------------------------------------------------------
consensus_10434#1      ------------------------------------------------------------
consensus_10434#2      ------------------------------------------------------------
                                                                                   

consensus_10434#0      CGATTTCACCTGGGGGAATTTTATCATATTCATCGGTATCCACTAACATGGGTGATGATT 300
consensus_10434#3      ------------------------------------------------------------
consensus_10434#1      ------------------------------------------------------------
consensus_10434#2      ------------------------------------------------------------
                                                                                   

consensus_10434#0      CTCGTTTGAACGTTTTATTTACATTATCACAAGCATTAACAATATCATCCTTCTGAACGT 360
consensus_10434#3      ------------------------------------------------------------
consensus_10434#1      ------------------------------------------CGCCTAATTTTTCAAGGA 18
consensus_10434#2      ---------------------------------------------------AAAGGGAGA 9
                                                                                   

consensus_10434#0      CACGTTGGTTTGTGGAATGCGATGTGGAAGGAGATGGATCAGTTTCTGATGGTTTTGCCT 420
consensus_10434#3      ------------------------------------------------------------
consensus_10434#1      AGAGTTCTGAACAATGAACAGACCTTGTTGGAATGCGGCAAGTTTT---TGGTTACATTT 75
consensus_10434#2      GCAGACTCTCTACACTCTCGGCCGTACCAGGGCATTTGGGGGCACCAATAGCGTGTCTGC 69
                                                                                   

consensus_10434#0      TGTTATTATGAGA-GTCTTTATAGGATATTTGGGATATTTTCTGAGTAAGGCGAGTGGCT 479
consensus_10434#3      ------------------------------------------------------------
consensus_10434#1      TATTCATTTGTTA-ATCTTGTTACAACAAAACCG-TCCTACCGGTATAAAAATATCCTTC 133
consensus_10434#2      AGATCCCAGATGACGGCTGCACAGTCCCAGTTGGGTACTAGCACTTTGTGGGTAGTTCTT 129
                                                                                   

consensus_10434#0      TGGCGATGCAATTTATTGAAAGTATTTTCTCGTAAGGTTATTAAAGAATGATCATGAAGG 539
consensus_10434#3      ------------------------------------------------------------
consensus_10434#1      ATTTTATTCGGTTAGACACATTTAGCTAATCGGATTGTGACTCAAAATTTGACAGGCATC 193
consensus_10434#2      TTTGTTCTAAGGTCGCCCTTTTTAAAATCCCTTTCTGTTTTGACAAGGCAGCATCACTGG 189
                                                                                   

consensus_10434#0      GAGTCGCCAGAAAGATCACCATCACGAGAGAGAGAGGTTAGTAGCTCTGCTCAGCTCGCT 599
consensus_10434#3      ------------------------------------------------------------
consensus_10434#1      AAGCAAACACCATCAGTGATGCACGACTTCTTAGTATTTTTCAGTTCATTCGAATAGTTT 253
consensus_10434#2      AGATACTCGTTATCCAAAAAGGACGTTTTCTTTTCAAC--ATATCCCAGTAAAGTTGGCC 247
                                                                                   

consensus_10434#0      AACACCACTTAGTATCCCAGAGGTAATGTCTTGTATAGCTTGTTGCATGCTTATACCTCC 659
consensus_10434#3      ------------------------------------------------------------
consensus_10434#1      ATCTTTGTAAATTACTACACGAATTAGTAGAATATCAGTCTCCAGAAATTCAAACCACCT 313
consensus_10434#2      AAATGTCTGAACTTCAGACCATACCGGCGTTTGGCTGTTTAGTATGACTGATCGTTTCAC 307
                                                                                   

consensus_10434#0      AAACGTAAATCCGCC--CAGACCAGAACCACCCATGTTAGCTGTTGAGTCAGCTGTTGCA 717
consensus_10434#3      --------------C--CAGACCAGAACCACCGATGTTATCTGTTGAGTCAGCTGTTGCA 44
consensus_10434#1      TAGTGTTCGTCACTCGTTACGTTAGCACTACCTCATTCTTGTATTGTGCTACTAGATTCA 373
consensus_10434#2      TGGGACTCGGAGTCCACTGCATCATAGTGCACTCAATCTCAGACTGCAGGATCTCATCGA 367
                                     *        *       *    *       **    *     *  *

consensus_10434#0      GTTCCAGAAGATGATTGTTCTCTGGTGGTTGGAGGG-GGCCTGACAACGAGA----TGTA 772
consensus_10434#3      GTTCCAGAAGATGATTGTTCTCTGGTAGTTGGAGGG-GGCCTGACAACGAGA----TGTA 99
consensus_10434#1      TTAC--AACTGTCATAGCTACGCGGTGCTCGTACGTCGGCCTCTCAGTTTAAATAGTGTT 431
consensus_10434#2      TCTC--ACAGGCTATTATACCGTCAAAACCACACTG--ATTTCTTTTTTGGGACACCTTT 423
                          *         **                 *        *                * 

consensus_10434#0      C-CACTTTACCTTGAATA--CCGCATTCCAACAAGGTCTG--TTCATTGTTCAGAACTCT 827
consensus_10434#3      C-CACTTTACCTTGAATA--CCTGGACACAAAGAAAACTGAATTAAGCAATATCCAAATT 156
consensus_10434#1      TACATGTTATCCTGATTTATTCATGGCTTTGTTATATCTGGTCCTACTGATAGTATAATT 491
consensus_10434#2      CGTGATTTTTATGAAGTGGTTCACGTAACTG--GTGTTTA----AAATTGTAGGAAAATT 477
                             **      * *    *                *      *    *        *

consensus_10434#0      TC---CTTGAAAAATTAGGCGTT-GTTGT-TCAGCTGCGATGTTCAACTTCTGTTCTAT- 881
consensus_10434#3      TT---CCTACAATTTTAAACACCAGTTACGTGAACCACTTCATAAAAATCACGAAAGGTG 213
consensus_10434#1      CTAGTTNTGGTGCATTATGGGAT-TTTGAGCCAGTGAACATCATTACATTGTCTAACCGA 550
consensus_10434#2      TGGATATTGCTTAATTCAGTTTTCTTTGTGT---CCAGGTATTCAAGGTAAAGTGGTACA 534
                              *      **         **                  *  *           

consensus_10434#0      ------------------------------------------------------------
consensus_10434#3      TCCCAAAAAAGAAATCAGTGTGGTTTTGACGGTATAATAGCCTGTGAGATCGATGAGAGA 273
consensus_10434#1      TTCAGTCCTAGNTACAACTGTTATTACAACTAATANGTCGTTATCAATAAACAGCAATGT 610
consensus_10434#2      TCTCGTTGTCAGGCCCCCTCCAACTACCAGAGAACAATCATCTTCTG------------- 581
                                                                                   

consensus_10434#0      -------------------
consensus_10434#3      GAGTGGACTGGGAAGAGGT 292
consensus_10434#1      GACAGGATTGCAAACTA-- 627
consensus_10434#2      -------------------