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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10440#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1433 fasta sequence
[TATCCCACGTGCTTTGGTAGTAATCAACCCTGGCAATCCAACAGGTCAATTACTATCAAAGGACACAATTACAAACGTTTTAAAATTCGCTTACAAACATAATTTAGTTGTATTAGCCGATGAAGTATATCAACACAACATTTATGCACCAGATACAGGATTTATCTCATTTAAACGCGCTTTATATGATATTGGCGGAAGAATTTCCACGGAATTACAGTTAGCATCATTTATGTCATGTAGTAAAGGTTATATGGGAGAATGTGGTCTTCGTGGTGGATATTGTGAACTTGTGAATTTTCCTGAAGATGTTCAACAACAATTGTATAAATCCCTTTCAGCTCGACTATGTTCTTCATTATTGGGTCAACTAACAATGGATGTGGTTGTAAATCCTCCAAAACCTCATGAACCATCTTACAATTCATTTATGGAAGAAAAATCATCAGTGCTAGAAGAACTTAAACAAAAAGCTGAACTCACTACAAAATCATTAAATTCACTTCAAGGTTTTTCATGTAACCCAATCACTGGAGCAATGTATGCATTTCCACGAATTGATCTACCTAAAAAAGCAATCGAAATAGCAAAATCTAAAGGTATGCAACCAGACTTTATGTACTGCTTAGAACTCTTGGAAGAATATGGCGTCTGTGTAGTACCAGGATCTGGATTCGGTCAAGTACCAGGAACTTGGCATTTTAGAATAACGATTCTCCCTAGCATTGAAGAAATGAAACTGGTCATGGACTATTTAAAAGAATTTCATACATCTTTTCTTGCAAAGTATTCTTGAATCGTCTAACTATATGACAATCCATAGAGTATCTGAAATTTTGATATTTTTCATGT--TATATATATATACAGCTTTCACATTCTCATTCATCATGTATACCGATAGATATTCTGTTTGTATCCCATTAGAATTTGTTTCTTCTTTACTCTTTTCATAAATATAACATAATTTCTCTTCAGTTATCTATTTTTGAATCTACCACATTTAGCTATTGTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTCGTAATCCAGGGGGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGTAACTTTGTCTGATAATTGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATATTTATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGATTGAAATGGTTGAGTAATTTTCAGCTGAGTTTTGGTTTGTTTTTCATTTCGTAAATGATTNTTGTATTTTTTTGGGTTTTTGATAAAAGGGATCGTTATCTATTTANAGATGCTCCTGATCGGGTATTACTCTATTGGTGTTGCTGTATGTCTGTCCCGTCTGACTTTTATCTGGGAAATTTAAATTATTTT]
[-] EMBL CD159860 [TATCCCACGTGCTTTGGTAGTAATCAACCCTGGCAATCCAACAGGTCAATTACTATCAAAGGACACAATTACAAACGTTTTAAAATTCGCTTACAAACATAATTTAGTTGTATTAGCCGATGAAGTATATCAACACAACATTTATGCACCAGATACAGGATTTATCTCATTTAAACGCGCTTTATATGATATTGGCGGAAGAATTT CACGGAATTACAGTTAGCATCATTTATGTCATGTAGTAAAGGTTATATGGGAGAATGTGGTCTTCGTGGTGGATATTGTGAACTTG ]
[-] EMBL CD159865 [TATCCCACGTGCTTTGGTAGTAATCAACCCTGGCAATCCAACAGGTCAATTACTATCAAAGGACACAATTACAAACGTTTTAAAATTCGCTTACAAACATAATTTAGTTGTATTAGCCGATGAAGTATATCAACACAACATTTATGCACCAGATACAGGATTTATCTCATTTAAACGCGCTTTATATGATATTGGCGGAAGAATTTCCACGGAATTACAGTTAGCATCATTTAT ]
[+] EMBL CD082942 [ CCAGATACAGGATTTATCTCA TTAAACGCGCTTTATATGATATTGGCGGAAGAATTTCCACGGAATTACAGTTAGCATCATTTATGTCATGTAGTAAAGGTTATATGGGAGAATGTGGTCTTCGTGGTGGATATTGTGAACTTGTGAATTTTCCTGAAGATGTTCAACAACAATTGTATAAATCCCTTTCAGCTCGACTATGTTCTTCATTATTGGGTCAACTAACAATGGATGTGGTTGTAAATCCTCCAAAACCTCATGAACCATCTTACAATTCATTTATGGAAGAAAAATCATCAGTGCTAGAAGAACTTAAACAAAAAGCTGAACTCACTACAAAATCATTAAATTCACTTCAAGGTTTTTCATGTAACCCAATCACTGGAGCAATGTATGCATTTCCACGAATTGATCTACCTAAAAAAGCAATCGAAATAGCAAAATCTAAAGGTATGCAACCAGACTTTATGTACTGCTTAGAACTCTTGGAAGAATATGGCGTCTGTGTAGTACCAGGATCTGGATTCGGTCAAGTACCAGGAACTTGGCATTNTAGAATAACGATTCTCCCTAGCATTGAAGAAATGAAACTGG ]
[-] EMBL CD155088 [ ATTTATCTCATTTAAACGCGCTTTATATGATATTGGCGGAAGAATTTCCACGGAATTACAGTTAGCATCATTTATGTCATGTAGTAAAGGTTATATGGGAGAATGTGGTCTTCGTGGTGGATATTGTGAACTTGTGAATTTTCCTGAAGATGTTCAACAACAATTGTATAAATCCCTTTCAGCTCGACTATGTTCTTCATTATTGGGCCAATTAACAATGGATGTGGTTGTAAATCCTCCAAAACCTCATGAACCATCTTACAATTCATTTATGGAAGAAAAATCATCAGTGCTAGAAGAACTTAAACAAAAAGCTGAACTCACTACAAAATCATTAAATTCACTTCAAGGTTTTTCATGTAACCCAATCACTGGAGCAATGTATGCATTTCCACGAATTGATCTACCTAAAAAAGCAATCGAAATAGCAAAATCTAAAGGTATGCAACCAGACTTTATGTACTG ]
[+] EMBL CD188671 [ ACAATGGATGTGGTTGTAAATCCTCCAAAACCTCATGAACCATCTTACAATTCATTTATGGAAGAAAAATCATCAGTGCTAGAAGAACTTAAACAAAAAGCTGAACTCACTACAAAATCATTAAATTCACTTCAAGGTTTTTCATGTAACCCAATCACTGGAGCAATGTATGCATTTCCACGAATTGATCTACCTAAAAAAGCAATCGAAATAGCAAAATCTAAAGGTATGCAACCAGACTTTATGTACTGCTTAGAACTCTTGGAAGAATATGGCGTCTGTGTAGTACCAGGATCTGGATT ]
[+] EMBL CD140379 [ CATTTCCACGAATTGATCTACCTAAAAAAGCAATCGAAATAGCAAAATCCAAAGGTATGCAACCAGACTTTATGTACTGCTTAGAACTCTTGGAAGAATATGGCGTCTGTGTAGTACCAGGATCTGGATTCGGTCAAGTACCAGGAACTTGGCATTTTAGAATAACGATTCTCCCTAGCATTGAAGAAATGAAACTGGTCATGGACTATTTAAAAGAATTTCATACATCTTTTCTTGCAAAGTATTCTTGAATCGTCTAACTATATGACAATCCATAGAGTATCTGAAATTTTGATATTTTTCATGTTATATATATATATACAGCTTTCACATTCTCATTCATCATGTATACCGATAGATATTCTGTTTGTATCCCATTAGAATTTGTTTCTTCTTTACTCTTT ]
[+] EMBL CD080085 [ AGCAATCGAAATAGCAAAATCTAAAGGTATGCAACCAGACTTTATGTACTGCTTAGAACTCTTGGAAGAATATGGCGTCTGTGTAGTACCAGGATCTGGATTCGGTCAAGTACCAGGAACTTGGCATTTTAGAATAACGATTCTCCCTAGCATTGAAGAAATGAAACTGGTCATGGACTATTTAAAAGAATTTCATACATCTTTTCTTGCAAAGTATTCTTGAATCGTCTAACTATATGACAATCCATAGAGTATCTGAAATTTTGATATTTTTTATGT TATATATATATACAGCTTTCACATTCTCATTCATCATGTATACAGATAGATATTCTGTTTGTATCCAATTATAATTTGTTTCTTCTTTACTCTTTTCATAAATATAACATAATTTCTCTTCAGTTATCTATTTTTGAATCTACCACATTTAGCTATTGTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTCGTAATCCAGGGGGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGTAACTTTGTCTGATAATTGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATATTTATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGATTGAAATGGTTGAGTAATTTTCAGCTGAGTTTTGGTTTGTTTTTCATTTCGTAAATGATTNTTGTATTTTTTTGGGTTTTTGATAAAAGGGATCGTTATCTATTTANAGATGCTCCTGATCGGGTATTACTCTATTGGTGTTGCTGTATGTCTGTCCCGTCTGACTTTTATCTGGGAAATTTAAATTATTTT]
consensusID : consensus_10440#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 744 fasta sequence
[ACAGCTTTCACATTCTCATTCATCATGTATACAGATAGATATTCTGTTTGTATCCAATTAGAATTTGTTTCTTCTTTACTCTTTTCATAAATATAACATAATTTCTCTTCAGTTATCTATTTTTGAATCTACCACATTTAGCTATTGTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTCGTAATCACAGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGTAACTTTGTCTGATAATTGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATATTTATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGATTGAAATGGTTGAGTAATTTTCAGCTGAGTTTTGTTTTGTTTTTCCATTTCGTTAAAATGATTGTTTGTATTTTTTTTGGTTTTTCTGAT-AGAGAAGGGATCGTTTATCTTATAT-CAAATGATGCTACACTGATCACGGTTAATTAACTCTTATTGTTTGTTTGCTTGTTATGTTCCTGTTCACGTTCTTGTACTTTTTATCATGGGGAAAAGTATAAATAATTAATTATATTATATATACTTATTAATTATTATTTCTGTTATAAAAATGATATCACATGAAAAATACAAAAAAAGTAATGATTTCTCTACCTTGAATCTCTTTATGGAATAGAATCTATAATTTCAACTGATCATCTAATCAATACA]
[-] EMBL CD077206 [ACAGCTTTCACATTCTCATTCATCATGTATACAGATAGATATTCTGTTTGTATCCAATTAGAATTTGTTTCTTCTTTACTCTTTTCATAAATATAACATAATTTCTCTTCAGTTATCTATTTTTGAATCTACCACATTTAGCTATTGTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTCGTAATCACAGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGTAACTTTGTCTGATAATTGGAGTCTTCAATCACTTTATAATTTAATCCTTTCTATTCTTTTGTTTATATATTTATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGATTGAAATGGTTGAGTAATTTTCAGCTGAGTTTTGTTTTGTTTTTCCATTTCGTTAAAATGATTGTTTGTATTTTTTTTGGTTTTTCTGAT AGAGAAGGGATCGTTTATCTTATAT CAAATGATGCTACACTGATCACGGTTAATTAACTCTTATTGTTTGTTTGCTTGTTATGTTCCTGTTCACGTTCTTGTACTTTTTATCATGGGGAAAAGTATAAATAATTAATTATATTATAT ]
[-] EMBL CD076528 [ CCACATTTAGCTATTGTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTCGTAATCACAGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGTAACTTTGTCTGATAATTGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATATTTATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGATTGAAATGGTTGAGTAATTTTCAGCTGAGTTTTGTTTTGTTTTTCCATTTCGTTAAAATGATTGTTTGTATTTTTTTTGGTTTTTCTGAT AGAGAAGGGATCGTTTATCTTATAT CAAATGATGCTACACTGATCACGGTTAATTAACTCTTATTGTTTGTTTGCTTGTTATGTTCCTGTTCACGTTCTTGTACTTTTTATCATGGGGAAAAGTATAAATAATTAATTATATTATATATACTTATTAATTATTATTTCTGTTATAAAAATGATATCACATGAAAAATACAAAAAAAGTAATGATTTCTCTACCTTGAATCTCTTTATGGAATAGAATCTATAATTTCAACTGATCATCTAATCAATACA]
[-] EMBL AI977307 [ AATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTCGTAATCACAGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGTAACTTTGTCTGATAATTGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATATTTATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGATTGAAATGGTTGAGTAATTTTCAGCTGAGTTTTGTTTTGTTTTTCCATTTCGTTAAAATGATTGTTTGTATTTTTTTTGGTTTTTCTGAT AGAGAAGGGATCGTTTATCTTATAT CAAATGATGCTACACTGATCACGGTTAATTAACTCTTATTGTTTGTTTGCTTGTTATGTTCCTGTTCACATTCTTGTACTTTTTATCATGGGGAAAAGTATAAATAATTAATTATATTATATATACTTATTAATTATTATTTCTGTTATAAAAATGATATCACATGAAAAATACAAAAAAAGTAAT ]
[-] EMBL AA999441 [ TTTCGTTAAAATGATTGTTTGTATTTTTTTTGGTTTTTCTGATAAGAGAAGGGATCGTTTATCTTATATGCAAATGATGCTACACTGATCACGGTTAATTAACTCTTATTGTTTGTTTGCTTGTTATGTTCCTGTTCACGGTCTTGTACTNTTTATCATGGGGAAAAGTATAAATAAGTAATTATAGTATAT ]
consensusID : consensus_10440#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 723 fasta sequence
[TTTTTTTTTTTTTTTTTAAATTATATGAAATATATTATCTAATCAAAAGGTAAGAATTTGTACTGCACGAAACGAGTGTCCTGGATTCCACTGGTGGCCACCATCCATCTCTGCCTGATAGGCGTTATATTCAGCATTTGTTGCTGAATAAAGAGGATATTGAGGTATAGGGACCATAACACCAGAACGTCTGGATCCATCTTCTCCAGTGGATATCAACTGAAGAATTGACTTAACGGCTTCACTTGCCCCATTCGATAAGAAAATATTTTGGGGATTAGCTGATAACTGATCCCGTTGTTCTATGTATTGTGCAACGTCTTCGCGAACAA-TTCTACGCCTGTAGACTGGCTGTAGACTCCAACACTCCCA-CACAACTGTCC-AAAATCTCCTGGCTCTTAGCTTAGCATCGTCCTGAACTAAGTTGGTATCCACTAA-TTGTGTCTTTGTCGCGGCACACAAAACTTCACGAATGAATGAAATGGGCCTTTGACCAGACGCATGACAGTCCCCGATATTGCAACGGATAATTTTGTTGAATCTTTTTTTTGACCCTTGTGATATTTCTTTCTCTAGTTCTAACGCCCTAAGTACTATCGGTCCACGGACAGCATACTGAAGCTTCACAACATGAGGATTGATAGTGTCACAACTCATTTTTTGATATGCACGAACATTTTGAATGATGCATGAGCGACCCACAATCTGTACCAAGCGAAATCC]
[+] EMBL AI395778 [TTTTTTTTTTTTTTTTTAAATTATATGAAATATATTATCTAATCAAAAGGTAAGAATTTGTACTGCACGAAACGAGTGTCCTGGATTCCACTGGTGGCCACCATCCATCTCTGCCTGATAGGCGTTATATTCAGCATTTGTTGCTGAATAAAGAGGATATTGAGGTATAGGGACCATAACACCAGAACGTCTGGATCCATCTTCTCCAGTGGATATCAACTGAAGAATTGACTTAACGGCTTCACTTGCCCCATTCGATAAGAAAATATTTTGGGGATTAGCTGATAACTGATCCCGTTGTTCTATGTATTGTGCAACGTCTTCGCGAACAA TTCTACGCCTGTAGACTGGCTGTAGACTCCAACACTCCCA CACAACTGTCC AAAATCTCCTGGCTCTTAGCTTAGCATCGTCCTGAACTAAGTTGGTATCCACTAA TTGTGTCTTTGTCGCGGCACAC ]
[-] EMBL AI977695 [ ATTCGATAAGAAAATATTTTGGGGATTAGCTGATAACTGATCCGTTTGTTCTATGTATTGTGCAACGTCTTCGCGAACAACTTCTACGCCTGTAGACTGGCTGTAGACTCCAACACTCCCACCACAACTGTCCAAAAATCTCCTGGCTCTTAGCTTAGCATCGTCCTGAACTAAGTTGGTATCCA TAATTTGTGTCTTTGTCGCGGCACACAAAACTTCACGAATGAATGAAATGGGCCTTTGACCAGACGCATGACAGTCCCCGATATTGCAACGGATAATTTTGTTGAATCTTTTTTTTGACCCTTGTGATATTTCTTTCTCTAGTTCTAACGCCCTAAGTACTATCGGTCCACGGACAGCATACTGAAGCTTCACAACATGAGGATTGATAGTGTCACAACTCATTTTTTGATATGCACGAACATTTTGAATGATGCATGAGCGACCCACAATCTGTACCAAGCGAAATCC]
consensusID : consensus_10440#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 637 fasta sequence
[ACTTAGGGCGTTAGAACTAGAGAAAGAAATATCACAAGTTAGATCATTTTAGCTATTAATTATAATCAGGGGTCAAAAAAAAAGATTCAACAAAATTATCCGTTGCAATATCGGGGACTGTCATGCGTCTGGTCAAAGGCCCATTTCATTCATTCGTGAAGTTTTGTGTGCCGCGACAAAGACACAAATTATGGATACCAACTTAGTTCAGGACGATGCTAAGCTAAGAGCCAGGAGATTTTTGGACAGTTGTGGTGGGAGTGTTGGAGTCTACAGCCAGTCTACAGGCGTAGAAGTTGTTCGCGAAGACGTTGCACAATACATAGAACAACGGGATCAGTTATCAGCTAATCCCCAAAATATTTTCTTATCGAATGGGGCAAGTGAAGCTGTTAAGTCAATTCTTCAGTTGATATCCACTGGAGAAGATGGATCCAGACGTTCTGGTGTTATGGTCCCTATACCTCAATATCCTCTTTATTCAGCAACAAATGCTGAATATAACGCCTATCAGATTGATTACTACTTGGATGAATCAAATGGATGGGACCTAAGTATTGAACAGTTGGAAGAAGCTNTAAATAAATGCAAAGATAAATGTATCCCACGTGCTTTGGTAGTAATCAACCCTGGCAAT]
[+] EMBL CD183437 [ACTTAGGGCGTTAGAACTAGAGAAAGAAATATCACAAGTTAGATCATTTTAGCTATTAATTATAATCAGGGGTCAAAAAAAAAGATTCAACAAAATTATCCGTTGCAATATCGGGGACTGTCATGCGTCTGGTCAAAGGCCCATTTCATTCATTCGTGAAGTTTTGTGTGCCGCGACAAAGACACAAATTATGGATACCAACTTAGTTCAGGACGATGCTAAGCTAAGAGCCAGGAGATTTTTGGACAGTTGTGGTGGGAGTGTTGGAGTCTACAGCCAGTCTACAGGCGTAGAAGTTGTTCGCGAAGACGTTGCACAATACATAGAACAACGGGATCAGTTATCAGCTAATCCCCAAAATATTTTCTTATCGAATGGGGCAAGTGAAGCTGTTAAGTCAATTCTTCAGTTGATATCCACTGGAGAAGATGGATCCAGACGTTCTGGTGTTATGGTCCCTATACCTCAATATCCTCTTTATTCAGCAACAAATGCTGAATATAACGCCTATCAGATTGATTACTACTTGGATGAATCAAATGGATGGGACCTAAGTATTGAACAGTTGGAAGAAGCTNTAAATAAATGCAAAGATAAATGTATCCCACGTGCTTTGGTAGTAATCAACCCTGGCAAT]
[+] EMBL AI975253 [ AAATTATCCGTTGCAATATCGGGGACTGTCATGCGTCTGGTCAAAGGCCCATTTCATTCATTCGTGAAGTTTTGTGTGCCGCGACAAAGACACAAATTATGGATACCAACTTAGTTCAGGACGATGCTAAGCTAAGAGCCAGGAGATTTTTGGACAGTTGTGGTGGGAGTGTTGGAGTCTACAGCCAGTCTACAGGCGTAGAAGTTGTTCGCGAAGACGTTGCACAATACATAGAACAACGGGATCAGTTATCAGCTAATCCCCAAAATATTTTCTTATCGAATGGGGCAAGTGAAGCCGTTAAGTCAATTCTTCAGTTGATATCCACTGGAGAAGATGGATCCAGACGTTCTGGTGTTATGGTCCCTATACCTCAATATCCTCTTTATTCAGCAACAAATGCTGAATATAACGCCTATCAGATTGATTACTACTTGGATGAATCAAATGGATGGGACCTAAGTATTGAACAGTTGGAAGAAGCTTTAAA ]
consensusID : consensus_10440#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 407 fasta sequence
[TATATGTATTGATTAGATGATCAGTTGAAATTATAGATTCTATTCACATAAAGAGATTCAAGGTAGAGAAATCATTACTTTTTTGGTATTTTTCATGTGATATCATTTTTATAACAGAAATAATAATTAATAAGTATATATAATATAATTAATTATTTAACTTTTCACATGATAAAAGTAAAGATTGTGAAAGGAACTTAACAGCCAACAACATTAGGGTTAATTAAANGNATCGGTTGGCATCATTTGTTATAGGTTAACGTCCTTCTCTTTCGGAATCCCCTAAATTCAACTTCTTTTACGAATGGAAACAAACAATCTCGCTGGAATTCTCACATTCCATCTCAATTTTTTCGCTAACCTTGTTATCATTGTTGTAATGATAATTTTACAAGGATGGGAGTTAT]
[+] EMBL AI639553 [TATATGTATTGATTAGATGATCAGTTGAAATTATAGATTCTATTCACATAAAGAGATTCAAGGTAGAGAAATCATTACTTTTTTGGTATTTTTCATGTGATATCATTTTTATAACAGAAATAATAATTAATAAGTATATATAATATAATTAATTATTTAACTTTTCACATGATAAAAGTAAAGATTGTGAAAGGAACTTAACAGCCAACAACATTAGGGTTAATTAAANGNATCGGTTGGCATCATTTGTTATAGGTTAACGTCCTTCTCTTTCGGAATCCCCTAAATTCAACTTCTTTTACGAATGGAAACAAACAATCTCGCTGGAATTCTCACATTCCATCTCAATTTTTTCGCTAACCTTGTTATCATTGTTGTAATGATAATTTTACAAGGATGGGAGTTAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10440#0 TATCCCACGTGCTTTGGTAGTAATCAACCCTGGCAATCCAACAGGTCAATTACTATCAAA 60
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 GGACACAATTACAAACGTTTTAAAATTCGCTTACAAACATAATTTAGTTGTATTAGCCGA 120
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 TGAAGTATATCAACACAACATTTATGCACCAGATACAGGATTTATCTCATTTAAACGCGC 180
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 TTTATATGATATTGGCGGAAGAATTTCCACGGAATTACAGTTAGCATCATTTATGTCATG 240
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 TAGTAAAGGTTATATGGGAGAATGTGGTCTTCGTGGTGGATATTGTGAACTTGTGAATTT 300
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 TCCTGAAGATGTTCAACAACAATTGTATAAATCCCTTTCAGCTCGACTATGTTCTTCATT 360
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 ATTGGGTCAACTAACAATGGATGTGGTTGTAAATCCTCCAAAACCTCATGAACCATCTTA 420
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 CAATTCATTTATGGAAGAAAAATCATCAGTGCTAGAAGAACTTAAACAAAAAGCTGAACT 480
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 CACTACAAAATCATTAAATTCACTTCAAGGTTTTTCATGTAACCCAATCACTGGAGCAAT 540
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 GTATGCATTTCCACGAATTGATCTACCTAAAAAAGCAATCGAAATAGCAAAATCTAAAGG 600
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 TATGCAACCAGACTTTATGTACTGCTTAGAACTCTTGGAAGAATATGGCGTCTGTGTAGT 660
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 ACCAGGATCTGGATTCGGTCAAGTACCAGGAACTTGGCATTTTAGAATAACGATTCTCCC 720
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 TAGCATTGAAGAAATGAAACTGGTCATGGACTATTTAAAAGAATTTCATACATCTTTTCT 780
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 TGCAAAGTATTCTTGAATCGTCTAACTATATGACAATCCATAGAGTATCTGAAATTTTGA 840
consensus_10440#1 ------------------------------------------------------------
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 ------------------------------------------------------------
consensus_10440#0 TATTTTTCATGTTATATATATATACAGCTTTCACATTCTCATTCATCATGTATACCGAT- 899
consensus_10440#1 -----------------------ACAGCTTTCACATTCTCATTCATCATGTATACAGAT- 36
consensus_10440#4 ----------------------------------------------TATATGTATTGATT 14
consensus_10440#3 -------------------ACTTAGGGCGTTAGAACTAGAGAAAGAAATAT-CACAAGTT 40
consensus_10440#2 -----------------------------TTTTTTTTTTTTTTTTTAAATTATATGAAAT 31
* * *
consensus_10440#0 AGATATTCTGTTTGTATCCCATTAGAATTTGTTTC-TTCTTTACTCTTTTCATAAATATA 958
consensus_10440#1 AGATATTCTGTTTGTATCCAATTAGAATTTGTTTC-TTCTTTACTCTTTTCATAAATATA 95
consensus_10440#4 AGATGATCAGTTGA-----AATTATAGATTCTATT-CACATAAAGAGATTCAAGGTAGAG 68
consensus_10440#3 AGATCATT--TTAGCTATTAATTATAATCAGGGGT-CAAAAAAAAAGATTCAACAAAATT 97
consensus_10440#2 ATATTATCTAATCAAAA--GGTAAGAATTTGTACTGCACGAAACGAGTGTCCTGGATTCC 89
* ** * * * * * * **
consensus_10440#0 ACATAATTTCTCTTCAGTTATCTATTTTTGAATCTACCAC-------ATTTAGCTATT-- 1009
consensus_10440#1 ACATAATTTCTCTTCAGTTATCTATTTTTGAATCTACCAC-------ATTTAGCTATT-- 146
consensus_10440#4 AAATCATTACTTTTTTGGTATTTTTCATGTGAT--ATCAT-------TTTTA-TAACA-- 116
consensus_10440#3 AT-CCGTTGCAATATCGGGGACTGTCATGCGTCTGGTCAAAGGCCCATTTCATTCATTCG 156
consensus_10440#2 AC-TGGTGGCCACCATCCATCTCTGCCTGATAGGCGTTATATTCAGCATTTGTTGCTGAA 148
* * * * * **
consensus_10440#0 -GTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTC-G 1067
consensus_10440#1 -GTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTC-G 204
consensus_10440#4 -GAAATAATAATTAATAAGTATATAT-----AATATAATTAATTATTTAACTTTTCAC-A 169
consensus_10440#3 TGAAGTTTTGTGTGCCGCGACAAAGACACAAATTATGGATACCAACTTAGTTCAGGACGA 216
consensus_10440#2 TAAAGAGGATATTGAGGTATAGGGACCATAACACCAGAACGTCTGGATCCATCTTCTC-- 206
* * *
consensus_10440#0 TAATCCAGGGGGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGT-AACTTTGTCTG 1126
consensus_10440#1 TAATC---ACAGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGT-AACTTTGTCTG 260
consensus_10440#4 TGATA-----AAAGTAAAGATTGTGAAAGGAACT--TAACAGCCA-AC-AACATTAGG-G 219
consensus_10440#3 TGCTAAGCTAAGAGCCAGGAGATTTTTGGACAGTTGTGGTGGGAGTGTTGGAGTCTACAG 276
consensus_10440#2 CAGTGGATATCAACTGAAGAATTGACTTAACGGCTTCACTTGCCCCAT--TCGATAAGAA 264
* *
consensus_10440#0 ATAAT-TGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATAT 1185
consensus_10440#1 ATAAT-TGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATAT 319
consensus_10440#4 TTAAT-TAAANGNATCGGT-------TGGCATCATTTGTTATAG------GTTAACGTCC 265
consensus_10440#3 CCAGTCTACAGGCGTAGAAGTTGTTCGCGAAGACGTTGCACAATACATAGAACAACGGGA 336
consensus_10440#2 AATATTTTGGGGATTAGCTGA--TAACTGATCCCGTTGTTCTATGTATTGTGCAACGTCT 322
* * * * * *
consensus_10440#0 TT---ATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGAT 1242
consensus_10440#1 TT---ATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGAT 376
consensus_10440#4 TT---CTCT-TTCGGAATCCCCTAAAT--TCAACTTCTTTTACGAATGGAAACAAACAAT 319
consensus_10440#3 TC---AGTTATCAGCTAATCCCCAAAATATTTTCTTATCGAATGGGGCAAGTGAAGCTGT 393
consensus_10440#2 TCGCGAACAATTCTACGCCTGTAGACTGGCTGTAGACTCCAACACTCCCACACAACTGTC 382
* * * * *
consensus_10440#0 TGAA-----ATGGTTGAGTAATTTTCA--GC-TGAGTTTTGGTT--TGTTTTTC-ATTTC 1291
consensus_10440#1 TGAA-----ATGGTTGAGTAATTTTCA--GC-TGAGTTTTGTTT--TGTTTTTCCATTTC 426
consensus_10440#4 CTCG-----CTGG------AATTCTCAC-AT-TCCATCTCAATT--TTTTCGCTAACCTT 364
consensus_10440#3 TAAG-----TCAATTCTTCAGTTGATAT-CCACTGGAGAAGATG--GATCCAGACGTTCT 445
consensus_10440#2 CAAAATCTCCTGGCTCTTAGCTTAGCATCGTCCTGAACTAAGTTGGTATCCACTAATTGT 442
** * * *
consensus_10440#0 GT--AAATGATTNTT-GTATTTTTTTGGGTTTTT--GATAAA--AGGGATC--GTT-ATC 1341
consensus_10440#1 GTTAAAATGATTGTTTGTATTTTTTTTGGTTTTTCTGATAGAGAAGGGATC--GTTTATC 484
consensus_10440#4 GTT---ATCATTGTT-GTAAT------GATAATTTTACAAGGATGGGAGTT--AT----- 407
consensus_10440#3 GGTGTTATGGTCCCTATACCTCAATATCCTCTTTATTCAGCAACAAATGCTGAATATAAC 505
consensus_10440#2 GTCTTTGTCGCGGCACACAAA--ACTTCACGAATG-AATGAAATGGGCCTTTGACCAGAC 499
* * *
consensus_10440#0 TATTTANAGATGCTCCTGATCGGGTATTACTCTATTGG-TGTTGCTGTATGTCTGTCCCG 1400
consensus_10440#1 TTATATCAAATGATGCTACACTGATCACGGTTAATTAACTCTTATTGTTTGTTTG-CTTG 543
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 GCCTATCAGATTGATTACTACTTGGATGAATCAAATGGATGGGACCTAAGTATTGAACAG 565
consensus_10440#2 GCATGACAGTC---CCCGATATTGCAACGGATAATTTTGTTGAATCTTTTTTTTGACCCT 556
consensus_10440#0 TCTGACTTTTATCTGGGAAATTTAAATTATTTT--------------------------- 1433
consensus_10440#1 TTATGTTCCTGTTCACGTTCTTGTACTTTTTATCATGGGGAAAAGTATAAATAAT--TAA 601
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 TTGGAAGAAGCTNTAAATAAATGCAAAGATAAATGTATCCCACGTGCTTTGGTAG--TAA 623
consensus_10440#2 TGTGATATTTCTTTCTCTAGTTCTAACGCCCTAAGTACTATCGGTCCACGGACAGCATAC 616
consensus_10440#0 ------------------------------------------------------------
consensus_10440#1 TTATATTATATATACTTATTAATTATTATTTCTGTTATAAAAATGATATCACATGAAAAA 661
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 TCAACCCTGGCAAT---------------------------------------------- 637
consensus_10440#2 TGAAGCTTCACAACATGAGGATTGATAGTGTCACAACTCATTTTTTGATATGCACGAACA 676
consensus_10440#0 ------------------------------------------------------------
consensus_10440#1 TACAAAAAAAGTAATGATTTCTCTACCTTGAATCTCTTTATGGAATAGAATCTATAATTT 721
consensus_10440#4 ------------------------------------------------------------
consensus_10440#3 ------------------------------------------------------------
consensus_10440#2 TTTTGAATGATGCATGAGCGACCCACAATCTGTACCAAGCGAAATCC------------- 723
consensus_10440#0 -----------------------
consensus_10440#1 CAACTGATCATCTAATCAATACA 744
consensus_10440#4 -----------------------
consensus_10440#3 -----------------------
consensus_10440#2 -----------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||