These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10461#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1666 fasta sequence [GAGTTGAATTCGACCC-CGAGCGTCT-AGACAAGCT--TTTCCGATGAGAGTAGCACA-AATATGTAGCGTTAGCCTGGAATGTTTATCCAAGCTGATGGATGGTAATGTCCCTATCGAAGGTTCAGATACTCTCAGTGATCCCCGTGTATGGCTCGATTACCTAGCAGCACTGTTTCGTACTTTTAATTGCCTTTTACGACGTTTGGGAAATCCAAGTTCTAGTCAGTGGGATACAAGGGAACGCAATGCTGTTGATCGTACTACGTCTGAGATGGTGCTTTCTGCTCAAGATTGTTTGGCTGAATGCCTGCAGTTAGTAAGAGAAGTAATATGGCCAGTTGTAACCCGTGTACTCACACATTATGCCTCGCGCATGCGTCCAATGGAGCATGTTTGTCGTCTCATACGTTTTATTGTGCGTTGCTTTTCTGTGCACTTGCGAGATCTCCTCCCGGAACTTGCCGAAAAGATTGTACCGTCTTACACAACTGGAGGACGACATTCAAGTTTTCTCTATTTAACAAGCGTGCTCGTTGGTGAGTTCGGAGAACAATTAGATTGCAGAGTTGGTTTGGTTAATGTGTATGAGGCATTGAGTGGTCCAACATTAAAATCTATCTCTGGTTCTGGGACTCATAC-ACAACCACATACTGTGGAAGATCTGTTTCGGCTATGCACCCGACTTGTACAACACTGTGCAGCTGTTTTTCTCACCAGTAGCAGGATCAATTTGAATGAACTCTGCGATACCGCTGTCTCTTCTCTAAATCTCTGTTGTGCCGGCCCTGGTGCTGGTTCATCTAGTGATGATACACCGGATCCAAACTCACCTAGTAATGATGAGTCGAGTTCATCGTCAGCTTCTACCAGCGCATCAGCCGCAGCTGCTCGATTCTTCATCGAACTTATCATTTTTACGAATGAAGCATGTGAGGAGACACCAATGCAGGTTGTCCAGATTTTAGTATCTGGTAGACAGCTTCCTACTCCCTCTTGTCAGTCAGCTTTAGCTGCTCAGAACGTTATTGTGTGGTTAACTTACTCCAGGCCTACACAGCCTACTGATCCTAGTAATATGAATAATTGTTGTGGCGGACAACGGTTAGTTTCAGCATTATTGCAAGCATGTTGTCTTGGATTAATGGATGAAAGATTTCCCGAGATGGCAGATATTTTATATCATCTTAAGGTCATGATTAATCAAGAAATGTTTCTTAACTGGTTGAAGAACGCAGTAGCTAATTTGTCAACTATACGTACTGATGGTTTAGTCCAAGCTACACAAGAGCAAATTACCGATTTTCAAGATGTTGTTATGAATTCATCCCGAAGTTCAACGATCGTACATGCGCTTGACTCATTTTCAAGATTGTTCCGGTGAATTATACTCCCTGTATACAATCTTCAGTGTATAAAAAATATTCACCTCTCACTTTGCACTATTTCAAAACAGGCTTTTGTCCTTATTCCAGATTTTTTGTCGTTATGAGCAATTTCAACCAGTGTATTTTATACCATATATGCGGCCCCATTTTGAGAATGTTTCCAATTTTTTTGAACCTACTCTTTTTATCTTTATTTAAAAGCAAAGTCCAGTCAGTTTGGTTATAGTATATGAGCTATTTGAAATCAAAAAGAATATTTTAATCCGGAAAAAAAAAAAAAAAAA] [+] EMBL CD193177 [GAGTTGAATTCGACCCTCGAGCGTCT AGACAAGCT TTTCCGATGAGAGTAGCACA AATATGTAGCGTTAGCCTGGAATGTTTATCCAAGCTGATGGATGGTAATGTCCCTATCGAAGGTTCAGATACTCTCAGTGATCCCCGTGTATGGCTCGATTACCTAGCAGCACTGTTTCGTACTTTTAATTGCCTTTTACGACGTTTGGGAAATCCAAGTTCTAGTCAGTGGGATACAAGGGAACGCAATGCTGTTGATCGTACTACGTCTGAGATGGTGCTTTCTGCTCAAGATTGTTTGGCTGAATGCCTGCAGTTAGTAAGAGAAGTAATATGGCCAGTTGTAACCCGTGTACTCACACATTATGCCTCGCGCATGCGTCCAATGGAGCATGTTTGTCGTCTCATACGTTTTATTGTGCGTTGCTTTTCTGTGCACTTGCGAGATCTCCTCCCGGAACTTGCCGA ] [+] EMBL CD160514 [ c cagtgGTCTGAGACCGCCTGCTCTCCGATGAGAGTAGCACA AATATGTAGCGTTAGCCTGGAATGTTTATCCAAGCTGATGGATGGTAATGTCCCTATCGAAGGTTCAGATACTCTCAGTGATCCCCGTGTATGGCTCGATTACCTAGCAGCACTGTTTCGTACTTTTAATTGCCTTTTACGACGTTTGGGAAATCCAAGTTCCAGTCAGTGGGATACAAGGGAACGCAATGCTGTTGATCGTACTACGTCTGAGATGGTGCTTTCTGCTCAAGATTGTTTGGCTGAATGCCTGCAGTTAGTAAGAGAAGTAATATGGCCAGTTGTAACCCGTGTACTCACACATTATGCCTCGCGCATGCGTCCAATGGAGCATGTTTGTCGTCTCATACGTTTTATTGTGCGTTGCTTTTCTGTGCACTTGCGAGATCTCCTCCCGGAACTTGCCGAAAAGATTGTACCGTCTTACACAACTGGAGGACGACATTCAAGTTTTCTCTATTTAACAAGCGTGCTCGTTGGTGAGTTCGGAGAACAATTAGATTGCAGAGTTGGTTTGGTTAATGTGTATGAGGCATTGAGTGGTCCAACATTAAAATCTATCTCTGGGTCTGGGACTCATAC ACAACCACATACTGTGGAAGATCTGTTTCGGCTATGCACCCGACTTGTACAACACTGTGCAGCTGGTT ] [+] EMBL CD197960 [ AAGCT TTT TTACGAGAGTAGCAAAGAATA GTAGCGTTAGCCTGGAATGTTTATCCAAGCTGATGGATGGTAATGTCCCTATCTAAGGTTCAGATACTCTCAGTGATCCCCGTGTATGGCTCGATTACCTAGCAGCACTGTTTCGTGCTTTTAATTGCCTTTTACGACGTTTGGGAAATCCAAGTTCTAGTCAGTGGGATACAAGGGAACTTTTTGCTGTTGATCGTAC ] [+] EMBL CD149664 [ ATATGTAGCGTTAGCCTGGAATGTTTATCCAAGCTGATGGATGGTAATGTCCCTATCGAAGGTTCAGATACTCTCAGTGATCCCCGTGTATGGCTCGATTACCTAGCAGCACTGTTTCGTACTTTTAATTGCCTTTTACGACGTTTGGGAAATCCAAGTTCTAGTCAGTGGGATACAAGGGAACGCAATGCTGTTGATCGTACTACGTCTGAGATGGTGCTTTCTGCTCAAGATTGTTTGGCTGAATGCCTGCAGTTAGTAAGAGAAGTAATATGGCCAGTTGTAACCCGTGTACTCACACATTATGCCTCGCGCATGCGTCCAATGGAGCATGTTTGTCGTCTCATACGTTTTATTGTGCGTTGCTTTTCTGTGC ] [+] EMBL CD194964 [ ATGTAGCGTTAGCCTGGAATGTTTATCCAAGCTGATGGATGGTAATGTCCCTATCGAAGGTTCAGATACTCTCAGTGATCCCCGTGTATGGCTCGATTACCTAGCAGCACTGTTTCGTACTTTTAATTGCCTTTTACGACGTTTGGGAAATCCAAGTTCTAGTCAGTGGGATACAAGGGAACGCAATGCTGTTGATCGTACTACGTCTGAGATGGTGCTTTCTGCTCAAGATTGTTTGGCTGAATGCCTGCAGTTAGTAAGAGAAGTAATATGGCCAGTTGTAACCCGTGTACTCACACATTATGCCTCGCGCATGCGTCCAATGGAGCATGTTTGTCGTCTCATACGTTTTATTGTGCGTTGCTTTTCTGTGCACTTGCGAGATCTCCTCCCGGAACTTGCCGAAAAGATTGTACTGTCTTACACAACTGGAGGACAACATTCAAGTTTTCTCTATTTAACAAGCGTGCTCGTTGATGAGTTCGGAGAACAATTAGATTGCAGAGTTGGTTTGGTTAATGTGTATGAAGCATTGAGTGGTCC ACATTAAAATCTATCTCTGGTTCTGGGACTCATAC ACAA ] [-] EMBL CD160394 [ CATTAAAATCTATCTCTGGTTCT GGACTCATACAACAACCACATACTGTGGAAGATCTGTTTCGGCTATGCACCCGACTTGTACAACACTGTGCAGCTGTTTTTCTCACCAGTAGCAGGATCAATTTGAATGAACTCTGCGATACCGCTGTCTCTTCTCTAAATCTCTGTTGTGCCGGCCCTGGTGCTGGTTCATCTAGTGATGATACACCGGATCCAAACTCACCTAGTAATGATGAGTCGAGTTCATCGTCAGCTTCTACCAGCGCATCAGCCGCAGCTGCTCGATTCTTCATCGAACTTATCATTTTTACGAATGAAGCATGTGAGGAGACACCAATGCAGGTTGTCCAGATTTTAGTATCTGGTAGACAGCTTCCTACTCCCTCTTGTCAGTCAGCTTTAGCTGCTCAGAACGTTATTGTGTGGTTAACTTACTCCA ] [-] EMBL CD160376 [ GTGGAAGATCTGTTTCGGCTATGCACCCGACTTGTACAACACTGTGCAGCTGTTTTTCTCACCAGTAGCAGGATCAATTTGAATGAACTCTGCGATACCGCTGTCTCTTCTCTAAATCTCTGTTGTGCCGGCCCTGGTGCTGGTTCATCTAGTGATGATACACCGGATCCAAACTCACCTAGTAATGATGAGTCGAGTTCATCGTCAGCTTCTACCAGCGCATCAGCCGCAGCTGCTCGATTTTTCATCGAACTTATCATTTTTACGAATGAAGCATGTGAGGAGACACCAATGCAGGTTGTCCAGATTTTAGTATCTGGTAGACAGCTTCCTACTCCCTCTTGTCAGTCAGCTTTAGATGCTCAGAACGTTATTGTGTGGTTAACTTACTCCA ] [+] EMBL CD083313 [ GACACCAATGCAGGTTGTCCAGATTTTAGTATCTGGTAGACAGCTTCCTACTCCCTCTTGTCAGTCAGCTTTAGCTGCTCAGAACGTTATTGTGTGGTTAACTTACTCCAGGCCTACACAGCCTACTGATCCTAGTAATATGAATAATTGTTGTGGCGGACAACGGTTAGTTTCAGCATTATTGCAAGCATGTTGTCTTGGATTAATGGATGAAAGATTTCCCGAGATGGCAGATATTTTATATCATCTTAAGGTCATGATTAATCAAGAAATGTTTCTTAACTGGTTGAAGAACGCAGTAGCTAATTTGTCAACTATACGTACTGATGGTTTAGTCCAAGCTACACAAGAGCAAATTACCGATTTTCAAGATGTTGTTATGAATTCATCCCGAAGTTCAACGATCGTACATGCGCTTGACTCATTTTCAAGATTGTTCCGGTGAATTATACTCCCTGTATACAATCTTCAGTGTATAAAAAATATTCACCTCTCACTTTGCACTATTTCAAAACAGGCT ] [-] EMBL CD076832 [ ATGGCAGATATTTTATATCATCTTAAGGTCATGATTAATCAAGAAATGTTTTTTAACTGGTTGAAGAACGCAGTAGGTAATTTGTCAACTATACGTACTGATGGTTTAGTCCAAGCTACCCAAGAGCAAATTACCGATTTTCAAGATGTTGTTATGAATTCATCCCGAAGTTCAACGATTGTACATGCGCTTGACTCATTTTCAAGATTGTTCCGGTGAATTATACTCCCTGTATACAATTTTCAGGGTATAAAAAATATTCCCCTTTCCCTTTGCACTATTTCAAAACAGGGTTTTGTCCTTATTCCAGATTTTTTGTCGTTATGAGCAATTTCAACCAGTGTATTTTATACCATATATGCGGCCCCATTTTGAGAATGTTTCCAATTTTTTTGAACCTACTCTTTTTATCTTTATTTAAAAGCAAAGTCCAGTCAGTTTGGTTATAGTATATGAGCTATTTGAAATCAAAAAGAATAT ] [-] EMBL AI395592 [ AACAATCGTACATGCGCTTGACTCATTTTCAAGATTGTCCCGGTGAATTATACTCCCTGTATACAATCTTCAGTGTATAAAAAATATTCACCTCTCACTTTGCATTATTTCAAAACAGGCTTCTGTCCTTATTCCAGATTTTTTGTCGTTATGAGCAATTTCAACCAGTGTATTTTATACCATATATGCGGCCACATTTTGAGAATGTTTCCAATTTTCTTGAACCTACTCTTTTTATCTTTATTTAAATGCAGAGTCCAGTCAGTTTGGTTATAGTATATGAGCTATTTGAAATCAAAGAGAATATTTTAATCCGGAAAAAAAAAAAAAAAAA] consensusID : consensus_10461#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1169 fasta sequence [CCAACGTNTACACCTAATGGAGATGTTNCTATCCTTTCCCCTTGCACTCCGATTTCTCTTCGTTNTGCTCTAATTGATGACNATTGGCAGGATNTGGTCAATCGAGTTGCCTACGATCTACCAAGGCTGCTTGGGTTTCCTATCCATGATGCTACTCACTTTTTTGCTGGTATTGGACGAGGTCTAATGTGCTCTGTGGGCACAGGTGGTGGGGGAGTTGAATTCGCCCCTCGAGCGTCTAGACAAGCTTNTCCGATGAGAGTAGCACAAATATGTAGCGTTAGCCTGGAATGTTTATCCAAGCTGATGGATGGTAATGTCCCTATCGAAGGTTCAGATACTCTCAGTGATCCCCGTGTAACACCGATTGATAACTGTTTCCCAAGATCTCTTAGATCTAACTCAGCATTTGACGTTGACGTAGTAATTGGCAAACTATTAGTTATTTCTGAATTTCTCAGATCTGACGCACGTAATGACGAAGATGTTAAGTTTGTTGACAGATTCGAATTAACTAAATTTGGAGATTCCACAGGATCATCGTGAACTGCATTTTGTTTTTCTGTGGGGCATACATTTGACTGCATCCTAGATTTAGGGAGTTTCGTATCCATTCGATCTAAATAAGCACGTAATCCAATGTCCCCTGAACGAATTCGTGCCACTTCTTGTATGCGAATAGCTCCATCGATAGCTTGACGATAGCATAAGTTGAGCATAACCGATGGGACTGGGGATTCGTGGACCGCTGGGAAACCAAGAAGTGTTCTCATACGTTCAGCAGCCAATTGCCATTTGTTTTCCACTAAAAAAATAACATCTGAAAGTTGACGATTAATATCAACGCGTAATCTTAAACGGGGATTTTGCTCTGCCTCGATTACTCTCCACGCATCCGTTTGTGTCGGTGGAACTAATTCAATCCATACATCTTCGGGAAGTAGGAATTCATGTGTAGGTGCAGAGATGTTATTCAATTGCTTCANAGCAGGACANACAGGAGTACGTAACAAAAAACGGCGCCCATTGTGTTTGATTACAGTGGTAAATGAACTAATTCGTTTAACTTTTCTCCCNCATCGTGATCCAATGCTAAAATGACAGATTAAAAAACAGAAACCANGGCGAAAATGAAACTAGTATTGTTTGAGAGATAGAATAGAAAACGA] [-] EMBL CD202298 [CCAACGTNTACACCTAATGGAGATGTTNCTATCCTTTCCCCTTGCACTCCGATTTCTCTTCGTTNTGCTCTAATTGATGACNATTGGCAGGATNTGGTCAATCGAGTTGCCTACGATCTACCAAGGCTGCTTGGGTTTCCTATCCATGATGCTACTCACTTTTTTGCTGGTATTGGACGAGGTCTAATGTGCTCTGTGGGCACAGGTGGTGGGGGAGTTGAATTCGCCCCTCGAGCGTCTAGACAAGCTTNTCCGATGAGAGTAGCACAAATATGTAGCGTTAGCCTGGAATGTTTATCCAAGCTGATGGATGGTAATGTCCCTATCGAAGGTTCAGATACTCTCAGTGATCCCCGTGTAACACCGATTGATAACTGTTTCCCAAGATCTCTTAGATCTAACTCAGCATTTGACGTTGACGTAGTAATTGGCAAACTATTAGTTATTTCTGAATTTCTCAGATCTGACGCACGTAATGACGAAGATGTTAAGTTTGTTGACAGATTCGAATTAACTAAATTTGGAGATTCCACAGGATCATCGTGAACTGCATTTTGTTTTTCTGTGGGGCATACATTTGACTGCATCCTAGATTTAGGGAGTTTCGTATCCATTCGATCTAAATAAGCACGTAATCCAATGTCCCCTGAACGA ] [+] EMBL CD137955 [ GGAGATTCCACAGGATCATCGTGAACTGCATTTTGTTTTTCTGTGGGGCATACATTTGACTGCATCCTAGATTTAGGGAGTTTCGTATCCATTCGATCTAAATAAGCACGTAATCCAATGTCCCCTGAACGAATTCGTGCCACTTCTTGTATGCGAATAGCTCCATCGATAGCTTGACGATAGCATAAGTTGAGCATAACCGATGGGACTGGGGATTCGTGGACCGCTGGGAAACCAAGAAGTGTTCTCATACGTTCAGCAGCCAATTGCCATTTGTTTTCCACTAAAAAAATAACATCTGAAAGTTGACGATTAATATCAACGCGTAATCTTAAACGGGGATTTTGCTCTGCCTCGATTACTCTCCACGCATCCGTTTGTGTCGGTGGAACTAATTCAATCCATACATCTTCGGGAAGTAGGAATTCATGTGTAGGTGCAGAGATGTTATTCAATTGCTTCANAGCAGGACANACAGGAGTACGTAACAAAAAACGGCGCCCATTGTGTTTGATTACAGTGGTAAATGAACTAATTCGTTTAACTTTTCTCCCNCATCGTGATCCAATGCTAAAATGACAGATTAAAAAACAGAAACCANGGCGAAAATGAAACTAGTATTGTTTGAGAGATAGAATAGAAAACGA] [+] EMBL CD068897 [ GGACTGGGGATTCGTGGACCGCTGGGAAACCAAGAAGTGTTCTCATACGTTCAGCAGCCAATTGCCATTTGTTTTCCACTAAAAAAATAA ] consensusID : consensus_10461#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 624 fasta sequence [TCGGTACGAGGCGGCTATGCACCCGACTTGTACAACACTGTGTAGCTGTTTTTCTCACCACTAGCAGGATCAATTTGAATGAACTCTGCGATACCGCTGTCTCTTCTCTAAATCTCTGTTGTGCCGGCCCTGGTGCTGGTTCATCTAGTGATGATACACCGGATCCAAACTCACCTAGTAATGATGAGTCGAGTTCATCGTCAGCTTCTACCAGCGCATCAGCCGCAGCTGCTCGATTTTTCATCGAACTTATCATTTTTACGAATGAAGCATGTGAGGAGACACCAATGCAGGTTGTCCAGATTTTAGTATCTGGTAGACAGCTTCCTACTCCCTCTTGTCAGTCAGCTTTAGCTGCTCAGAACGTTATTGTGTGGTTAACTTACTCCAGGCCTACACAGCCTACTGATCCTAGTAATATGAATAATTGTTGTGGCGGACAACGGTTAGTTTCAGCATTATTGCAAGCATGTTGTCTTGGATTAATGGATGAAAGATTTCCCGAGATGGCAGATATTTTATATCATCTTAAGGTCATGATTAATCAAGAAATGTTTCTTAACTGGTTGAAGAACGCAGTAGCTAATTTGTCAACTATACGTACTGATGGTTTAGTCCAAGCTA] [+] EMBL CD083262 [TCGGTACGAGGCGGCTATGCACCCGACTTGTACAACACTGTGTAGCTGTTTTTCTCACCACTAGCAGGATCAATTTGAATGAACTCTGCGATACCGCTGTCTCTTCTCTAAATCTCTGTTGTGCCGGCCCTGGTGCTGGTTCATCTAGTGATGATACACCGGATCCAAACTCACCTAGTAATGATGAGTCGAGTTCATCGTCAGCTTCTACCAGCGCATCAGCCGCAGCTGCTCGATTTTTCATCGAACTTATCATTTTTACGAATGAAGCATGTGAGGAGACACCAATGCAGGTTGTCCAGATTTTAGTATCTGGTAGACAGCTTCCTACTCCCTCTTGTCAGTCAGCTTTAGCTGCTCAGAACGTTATTGTGTGGTTAACTTACTCCAGGCCTACACAGCCTACTGATCCTAGTAATATGAATAATTGTTGTGGCGGACAACGGTTAGTTTCAGCATTATTGCAAGCATGTTGTCTTGGATTAATGGATGAAAGATTTCCCGAGATGGCAGATATTTTATATCATCTTAAGGTCATGATTAATCAAGAAATGTTTCTTAACTGGTTGAAGAACGCAGTAGCTAATTTGTCAACTATACGTACTGATGGTTTAGTCCAAGCTA] consensusID : consensus_10461#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 557 fasta sequence [TAACTGTCGGTAGCTTTGCCGAAATACTGGTAGTCACTATTGAAGGCTGTTGAGTTGTAACCATAACAGGTAATTCAGATACCTGTGAAAAATGATTTCCAGTTAATGTTTTTGGTAATAATGTTGATGTGCAGCTTTGAGTTGCTGTGACCGTAGCAACTGTAGGATTATTAACGCTGAGAATGGCTTGAGAAGAATGACAAGATGTAGAGACTGGTGTATTGCTTCGAATGGAATGACGAGAAACCCAATCACGATGAAGTAAATAATCACTGGCATTTAGATGTAAAAGACGCCTTAAACCATTACTTATACCGTCTCCATCTGGATCTAATGGTGGACATATTAGTAAGTCGGAGCAAGATGAACTCGATTGTTTCTGTGATCCTTTATCTTTAGTGCAGAAGAATTGATATTCAAAACGTATACGATCTGGACAACCCAAAGCCAAATAAATAGTTACCAGTTTAATTTCACGTGCCATCTCACGTGTAACACCGATTGATAACTGTTTCCCAAGATCTCTTAGATCTAACTCAGCATTTGACGTTGACGTA] [+] EMBL CD200748 [TAACTGTCGGTAGCTTTGCCGAAATACTGGTAGTCACTATTGAAGGCTGTTGAGTTGTAACCATAACAGGTAATTCAGATACCTGTGAAAAATGATTTCCAGTTAATGTTTTTGGTAATAATGTTGATGTGCAGCTTTGAGTTGCTGTGACCGTAGCAACTGTAGGATTATTAACGCTGAGAATGGCTTGAGAAGAATGACAAGATGTAGAGACTGGTGTATTGCTTCGAATGGAATGACGAGAAACCCAATCACGATGAAGTAAATAATCACTGGCATTTAGATGTAAAAGACGCCTTAAACCATTACTTATACCGTCTCCATCTGGATCTAATGGTGGACATATTAGTAAGTCGGAGCAAGATGAACTCGATTGTTTCTGTGATCCTTTATCTTTAGTGCAGAAGAATTGATATTCAAAACGTATACGATCTGGACAACCCAAAGCCAAATAAATAGTTACCAGTTTAATTTCACGTGCCATCTCACGTGTAACACCGATTGATAACTGTTTCCCAAGATCTCTTAGATCTAACTCAGCATTTGACGTTGACGTA] [+] EMBL CD068140 [ TGACAAGATGTAGGGACTGGTGTATTGCTTCGAATGGAATGACGAGAAACCCAATCACGATGAAGTAAATAATCACTGGCATTTAGATGTAAAAGACGCCTTAAACCATTACTTATACCGTCTCCATCTGGATCTAATGGTGGACATATTAGTAAGTCGGAGTAAGATGAACTCGATTGTTTCTGTGATCCTT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10461#0 GAGTTGAATTCGACCCCGAGCGTCTAGACAAGCTTTTCCGATGAGAGTAGCACAAATATG 60 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 ------------------------------------------------------------ consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 TAGCGTTAGCCTGGAATGTTTATCCAAGCTGATGGATGGTAATGTCCCTATCGAAGGTTC 120 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 ------------------------------------------------------------ consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 AGATACTCTCAGTGATCCCCGTGTATGGCTCGATTACCTAGCAGCACTGTTTCGTACTTT 180 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 ------------------------------------------------------------ consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 TAATTGCCTTTTACGACGTTTGGGAAATCCAAGTTCTAGTCAGTGGGATACAAGGGAACG 240 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 ------------------------------------------------------------ consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 CAATGCTGTTGATCGTACTACGTCTGAGATGGTGCTTTCTGCTCAAGATTGTTTGGCTGA 300 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 ------------------------------------------------------------ consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 ATGCCTGCAGTTAGTAAGAGAAGTAATATGGCCAGTTGTAAC--CCGTGTACTCACACAT 358 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 ------------------CCAACGTNTACACCTAATGGAGATGTTNCTATCCTTTCCCCT 42 consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 TATGCCTCGCGCATGCGTCCAATGGAGCATGTTTGTCGTCTCATACGTTTTATTGTGCGT 418 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 TGCACTCCGATTTCTCTTCGTTNTGCTCTAATTGATGACNATTGGCAGGATNTGGTCAAT 102 consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 TGCTTTTCTGTGCACTTGCGAGATCTCCTCCCGGAACTTGCCGAAAAGATTGTACCGTCT 478 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 CGAGTTGCCTACGATCTACCAAGGCTGCTTGGGTTTCCTATCCATGATGCTACTCACTTT 162 consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 TACACAACTGGAGGACGACATTCAAGTTTTCTCTATTTAACAAGCGTGCTCGTTGGTGAG 538 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 TTTGCTGGTATTGGACGAGGTCTAATGTGCTCTGTGGGCACAGGTGGTGGGGGAGTTGAA 222 consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 TTCGGAGAACAATTAGATTGCAGAGTTGGTTTGGTTAATGTGTATGAGGCATTGAGTGGT 598 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 TTCGCCCCTCGAGCGTCTAGACAAGCTTNTCCGATGAGAGTAGCACAAATATGTAGCGTT 282 consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 CCAACATTAAAATCTATCTCTGGTTCTGGGACTCATACACAACCACATACTGTGGAAGAT 658 consensus_10461#2 -------------------------------------------------------TCGGT 5 consensus_10461#1 ---AGCCTGGAATGTTTATCCAAGCTGATGGATGGTA-ATGTCC-----CTATCGAAGGT 333 consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 CTGTTTCGGCTATGCACCCGACTTGTACAACACTGTGCAGCTGTT-TTTCTCACCAGTAG 717 consensus_10461#2 ACGAGGCGGCTATGCACCCGACTTGTACAACACTGTGTAGCTGTT-TTTCTCACCACTAG 64 consensus_10461#1 TCAGATACTCTCAGTGATC--CCCGTGTAACACCGATTGATAACTGTTTCCCAAGATCTC 391 consensus_10461#3 ---------------------------------------------------TAACTGTCG 9 * consensus_10461#0 CAGGATCAATTTGAATGAACTCTGCGATACCGCTGTCTCTTCTCTAAATCTCTGTTGTGC 777 consensus_10461#2 CAGGATCAATTTGAATGAACTCTGCGATACCGCTGTCTCTTCTCTAAATCTCTGTTGTGC 124 consensus_10461#1 TTAGATCTAACTCA--GCATTTGACGTTGACGTAGTAA-TTGGCAAACTATTAGTTATTT 448 consensus_10461#3 GTAGCTTTGCCGAA--ATACTGGTAGTCACTATTGAAGGCTGTTGAGTTGT-AACCATAA 66 * * * * * * * * * * * * consensus_10461#0 CGG----CCCTGGTGCTGGTTCATCTAGTGATGATACACCGGATCCAAACTCACCTAGTA 833 consensus_10461#2 CGG----CCCTGGTGCTGGTTCATCTAGTGATGATACACCGGATCCAAACTCACCTAGTA 180 consensus_10461#1 CTGAATTTCTCAGATCTGACGCACGTAATGACGA------AGATGTTAAGTTTGTTGACA 502 consensus_10461#3 CAG------GTAATTCAGATACCTGTGAAAAATGATTTCCAGTTAATGTTTTTGGTAATA 120 * * * * * * * * * * * * consensus_10461#0 ATGATGAGTCGAGTTCATCGTCAGCTTCTACCAGCGCATCAGCCGCAGCTGCTCGATTCT 893 consensus_10461#2 ATGATGAGTCGAGTTCATCGTCAGCTTCTACCAGCGCATCAGCCGCAGCTGCTCGATTTT 240 consensus_10461#1 GATTCGAATTAACTAAATTTGGAGATTCCACAGGATCATCGTGAACTGCATTTTGTTTTT 562 consensus_10461#3 ATGTTGATGTG---CAGCTTTGAGTTGCTGTGACCGTAGCAACTGTAGGATT----ATTA 173 ** ** * * * * * * consensus_10461#0 TCATCGAACTTATCATTTTTACGAATGAAGCATGTGAGGAGACACCAATGCAGGTTGTCC 953 consensus_10461#2 TCATCGAACTTATCATTTTTACGAATGAAGCATGTGAGGAGACACCAATGCAGGTTGTCC 300 consensus_10461#1 CTGTGGGGCATA-CATTTGACTGCATCCTAGATTTAGGGAGTTTCGTATCCATTCGATCT 621 consensus_10461#3 ACGCTGAGAATGGCTTGAGAAGAATGACAAGATGTAGAGACTGGTGTATTGCTTCGAATG 233 * * * * ** * ** ** consensus_10461#0 AGATTTTAGTATCTGGTAGACAGCTTCCTACTCCCTCTTGTCAGTCAGCTTTAGC-TGCT 1012 consensus_10461#2 AGATTTTAGTATCTGGTAGACAGCTTCCTACTCCCTCTTGTCAGTCAGCTTTAGC-TGCT 359 consensus_10461#1 AAAT--AAGCACGTAATCCAATGTCCCCTGAACGAATTCGT--GCCACTTCTTGTATGCG 677 consensus_10461#3 GAAT---GACGAGAAACCCAAT-CACGATGAAGTAAATAATC-ACTGGCATTTAGATGTA 288 ** * * * * * ** consensus_10461#0 CAGAACGTTATTGTGTGGTTAAC--TTACTCCAGGCCTACACAGCCTACTGATCCTAGTA 1070 consensus_10461#2 CAGAACGTTATTGTGTGGTTAAC--TTACTCCAGGCCTACACAGCCTACTGATCCTAGTA 417 consensus_10461#1 AATAGCTCCATCGATAGCTTGACGATAGCATAAGTTGAGCATAACCGA-TGGGACTGGGG 736 consensus_10461#3 AAAGACGCC--------TTAAACCATTACTTATACCGTCTCCATC----TGGATCTAATG 336 * * * ** * * * * ** ** consensus_10461#0 ATATGAATAATTGTTGTGGCGGACAACGGTTAGTTTCAGCATTATTGCAAGCATGTTGTC 1130 consensus_10461#2 ATATGAATAATTGTTGTGGCGGACAACGGTTAGTTTCAGCATTATTGCAAGCATGTTGTC 477 consensus_10461#1 ATTCGTG-GACCGCTG-GGAAACCAAGAAGTGTTCTCATACGTTCAGCAGCCAATTGCCA 794 consensus_10461#3 GTGGACATATTAGTAAGTCGGAGCAAGATGAACTCG-ATTGTTTCTGTGATCCTTTATCT 395 * * *** * * * * * * consensus_10461#0 TTGGATTAATGGATGAAAGATTTCCCGAGATG-GCAGATATTTTATATCATCTTAAGGTC 1189 consensus_10461#2 TTGGATTAATGGATGAAAGATTTCCCGAGATG-GCAGATATTTTATATCATCTTAAGGTC 536 consensus_10461#1 TTTGTTTTCCACTAAAAAAATAACATCTGAAA-GTTGACGATTAATATCAACGCGTAATC 853 consensus_10461#3 TTAG-----TGCAGAAGAATTGATATTCAAAACGTATACGATCTGGA-CAACCCAAAGCC 449 ** * * * * * * * * * ** * * consensus_10461#0 ATGATTAATCAAGAAATGTTTCTTAACTGGTTGAAGAACGCAGTAGCTAATTTGTCAACT 1249 consensus_10461#2 ATGATTAATCAAGAAATGTTTCTTAACTGGTTGAAGAACGCAGTAGCTAATTTGTCAACT 596 consensus_10461#1 ----TTAAACGGGGATTTTGCTCTGCCTCGATTACTCTCCACGCATCCG-TTTGT----- 903 consensus_10461#3 ------AAATAAATAGT---TACCAGTTTAATTTCACGTGCCATCTCACGTGTAACACCG 500 ** * * * * * * * consensus_10461#0 ATACGTACTGATGGTTTAGTCCAAGCTACACAAGAGCAAATTACCGATTTTCAAGATGTT 1309 consensus_10461#2 ATACGTACTGATGGTTTAGTCCAAGCTA-------------------------------- 624 consensus_10461#1 GTCGGTGGAACTAATTCAATCCA---TACATCTTCGGGAAGTAGGAATTCATGTGTAGGT 960 consensus_10461#3 ATTGATA--ACTGTTTC---CCAAGATCTCTTAGATCTAACTCAGCATTTG-ACGTTGAC 554 * * * ** *** * consensus_10461#0 GTTATGAATTCATCCCGAAGTTCAACGATCGTACATGCGCTTGACTCATTTTCAAGATTG 1369 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 GCAGAGATGTTATTCAATTGCTTCANAGCAGGACANACAGGAGTACGTAACAAAAAACGG 1020 consensus_10461#3 GTA--------------------------------------------------------- 557 consensus_10461#0 TTCCGGTGAATTATACTCCCTGTATACAATCTTCAGTGTATAAAAAATATTCACCTCTCA 1429 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 CGCCCATTGTGTTTGATTACAGTGGTAAATGAACTA-ATTCGTTTAACTTTTCTCCCNCA 1079 consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 CTTTGCACTATTTCAAAACAGGCTTTTGTCCTTATTCCAGATTTTTTGTCGTTATGAGCA 1489 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 TCGTGATCCAATGCTAAAATGACAGATTAAAAAACAGAAACCANGGCGAAAATGAAACTA 1139 consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 ATTTCAACCAGTGTATTTTATACCATATATGCGGCCCCATTTTGAGAATGTTTCCAATTT 1549 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 GTATTGTTTGAGAGATAGAATAGAAAACGA------------------------------ 1169 consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 TTTTGAACCTACTCTTTTTATCTTTATTTAAAAGCAAAGTCCAGTCAGTTTGGTTATAGT 1609 consensus_10461#2 ------------------------------------------------------------ consensus_10461#1 ------------------------------------------------------------ consensus_10461#3 ------------------------------------------------------------ consensus_10461#0 ATATGAGCTATTTGAAATCAAAAAGAATATTTTAATCCGGAAAAAAAAAAAAAAAAA 1666 consensus_10461#2 --------------------------------------------------------- consensus_10461#1 --------------------------------------------------------- consensus_10461#3 --------------------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||