cluster # 10462

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10462 cluster # 10462 Sequences # 16 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10462#0 length = 1592 sequences # 7
consensus_10462#1 length = 924 sequences # 4

consensus_10462#2 length = 644 sequences # 4
consensus_10462#3 length = 264 sequences # 1

consensusID : consensus_10462#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1592
fasta sequence

                              [CAGATGTAGGATATAATGCAACGCATATAGCTACCAACTTATATACTAAAGCAAAAGGAGACTACGAAGAGGCAACGGCGTGTGGCTTTATGTTTCTGAGTCATATTTCCTTTACTTTCACAAAGTACAACAGGCTATCCGTTTTAATTAACCTCAAAAATGCTTGTTTCGACTTCGAAATCAGTGTTATATCTAGTTCATCAAGAGCATGGGACGCAGTTGATGAATTACCAAACACGTAAAAAATGAATCGTGCTGATTCTCCACGTTGAGTAGGTGAAGAGGCTAAACGACCACACTTATGGTACATATGTAGATTTCGCAGATACGGGATATATCAGTGGCATTTGGTTCTAGAACCTTTGCTGTTGAAGCTTATTGTGTAATTTAATACAAGGCTAAAACATTGAAGGGTCCAGTATGTAACTTGGAGCGTTATTTAACGATACGAAATATATTTTAAAAGCTCGAATGGTTAGCATTAATTACGTATGTGTACGCGGAGAAATCCAGAGAAGTTGATGATGGGACGAAAAGA-AACATTAGGAAGCGAATGAGTTTCGGTGAAGCGTTCTTTTAAATTAGGGGTTAGATCGTTTCTAGACATCAAACGTGAGACAGAAGTGAGTTGTCAGAATTTCTTCGCACATGATTAACAGATTTTTTCATCGTTAAATTTGACTGACTATTTTTAACGTCTCCCGTCATTGTCTGGATATTTATTTTGATTGTCTTCCTCATCGACCCCTCGAATGAATTAGTCAGGGAACACTACTGATAAGTTAGGACTAAAAATAGGAAACAGAGGCCTGTTGGTTAGACCATTTCAATTCACATAACCAGAATTTTTCATCAGAACGTTGATCAGTAGCATCGAATCTGTAAAAGTGAGCATTATTAATCAACAATAGGAAATTCCAAGCTTTAATGATAAAGTATTTCTTATCAAATTAGATGACATACTGGCTTAATCTTATTCAACATTTCAATCGAAAAACGCTCCATACTTCGATGAATCGTACCAAACTGAGTAAATGCTTCGCTTGTGCATGCCATAGGCTCTTTAACACCAATTTCTGAAAAGGTGTCTCCCAACACAGCATAGACACGAGAAAGTTCATAGATTGCACGTAACAATTTTTTTGCATGATTTACCATACCCGAAAACACATTTGATGTTTTATTGAGTTCTTCCAACTTTTTAACCATACCATCATTTACAAGAATAGCTCGGCTTTGACCTAAAGCATCGGCTGTACTAGATTCCATTGTTTCAACAATACGATGTTTTACCTTTTTTAGTATTAAGTCTAGCGTTTTTCCTTGTTTTGGGTCTGCATGAAGTTTGTTATAGTTAATTCTTACTTCATCCTTGAAACTTTGAATAAGTCGAGCAGCTTCCACTTTAGTCTTGCCCTTTACAGATATGCCATTGACACCAGTTATTTCGTCCCCAGCTTGAAGACTACCATCTTCTGAAGCTGGCGTGGAGTCAAATATTTGAACAACGTAAAGGCATGGACAGTATGGGGCTCCCCCTCCAATACTTATACCCACTAGATTCTCCTCGTGCCGAATTTTTGGCCCGAGGG]

[-] EMBL CD085954             [CAGATGTAGGATATAATGCAACGCATATAGCTACCAACTTATATACTAAAGCAAAAGGAGACTACGAAGAGGCAACGGCGTGTGGCTTTATGTTTCTGAGTCATATTTCCTTTACTTTCACAAAGTACAACAGGCTATCCGTTTTAATTAACCTCAAAAATGCTTGTTTCGACTTCGAAATCAGTGTTATATCTAGTTCATCAAGAGCATGGGACGCAGTTGATGAATTACCAAACACGTAAAAAATGAATCGTGCTGATTCTCCACGTTGAGTAGGTGAAGAGGCTAAACGACCACACTTATGGTACATATGTAGATTTCGCAGATACGGGATATATCAGTGGCATTTGGTTCTAGAACCTTTGCTGTTGAAGCTTATTGTGTAATTTAATACAAGGCTAAAACATTGAAGGGTCCAGTATGTAACTTGGAGCGTTATTTAACGATACGAAATATATTTTAAAAGCTCGAATGGTTAGCATTAATTACGTATGTGTACGCGGAGAAATCCAGAGAAGTTGATGATGGGACGAAAAGA AACATTAGGAAGCGAATGAGTTTCGGTGAAGCGTTCTTTTAAATTAGGGGTTAGATCGTTTCTAGACATCAAACGTGAGACAGAAGTGAGTTGTCAGAATTTCTTCGCACATGATTAACAGATTTTTTCATCGTTAAATTTGACTGACTATTTTTAACGTCTCCCGTCATTGTCTGGATATTTATTTTGATTGTCTTCCTCctgt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD069531             [                                                                                                                                                                                                                                                                                                                                   AGATGCGGGATATATCAGTGGCATTTGGTTCTAGAACC TTGCTGTTGAAGCTTATTGTGTAATTTAATACAAGGCTAAAACATTGAAGGGTCCAGTATGTAACTTGGAGCGTTATTTAACGATACGAAATATATTTTAAAAGCTCGAATGGTTAGCATTAATTACGTATGTGTACGCGGAGAAATCCAGAGAAGTTGATGATGGGACGAAAAGA AACATTAGGAAGCGAATGAGTTTCGGTGAAGCGTTCTTTTAAATTAGGGGTTAGATCGTTTCTAGACATCAAACGTGAGACAGAAGTGAGTTGTCAGAATTTCTTCGCACATGATTAACAGATTTTTTCATCGTTAAATTTGACTGACTATTTTTAACGTCTCCCGTCATTGTCTGGATATTTATTTGGATTGTCTTCCTCATCGACCCCTCGAATGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD069319             [                                                                                                                                                                                                                                                                                                                                                                                      CTTATAGTGTAATTTAATACAAGGCTAAAACATTGAAGGGTCCAGTATGTAACTTGGAGCGTTATTTAACGATACGAAATATATTTTAAAAGCTCGAATGGTTAGCATTAATTACGTATGTGTACGCGGAGAAATCCAGAGAAGTTGATGATGGGACGAAAAGACACCATTAGGAAGCGAATGAGTCTCGGTGAAGCGTTCTTTTAAct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD068133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATCGTTTCTAGACATCAAACGTGAGACAGAAGTGAGTTGTCAGAATTTCTTCGCACATGATTAACAGATTTTTTCATCGTTAAATTTGACTGACTATTTTTAACGTCTCCCGTCATTGTCTGGATATTTATTTTGATTGTCTTCCTCATCGACCCCTCGAATGAATTAGTCAGGGAACACTACTGATAAGTTAGGACTAAAAATAGGAAACAGAGGCCTGTTGGTTAGACCATTTCAATTCACATAACCAGAATTTTTCATCAGAACGTTGATCAGTAGCATCGAATCTGTAAAAGTGAGCATTATTAATCAACAATAGGAAATTCCAAGCTTTAATGATAAAGTATTTCTTATCAAATTAGATGACATACTGGCTTAATCTTATTCAACATTTCAATCGAAAAACGCTCCATACTTCGATGAATCGTACCAAACTGAGTAAATGCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD069164             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GACAGAAGTGAGTTGTCAGAATTTCTTCGCACATGATTAACAGATTTTTTCATCGTTAAATTTGACTGACTATTCTTAACGTCTCCCGTCATTGTCTGGATATTTATTTGGATTGTCTTCCTCATCGACCCCTCGAATGAATTAGTCAGGGAACACTACTGATAAGTTAGGACTAAAAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD192395             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCCATACTTCGATGAATCGTACCAAACTGAGTAAATGCTTCGCTTGTGCATGCCATAGGCTCTTTAACACCAATTTCTGAAAAGGTGTCTCCCAACACAGCATAGACACGAGAAAGTTCATAGATTGCACGTAACAATTTTTTTGCATGATTTACCATACCCGAAAACACATTTGATGTTTTATTGAGTTCTTCCAACTTTTTAACCATACCATCATTTACAAGAATAGCTCGGCTTTGACCTAAAGCATCGGCTGTACTAGATTCCATTGTTTCAACAATACGATGTTTTACCTTTTTTAGTATTAAGTCTAGCGTTTTTCCTTGTTTTGGGTCTGCATGAAGTTTGTTATAGTTAATTCTTACTTCATCCTTGAAACTTTGAATAAGTCGAGCAGCTTCCACTTTAGTCTTGCCCTTTACAGATATGCCATTGACACCAGTTATTTCGTCCCCAGCTTGAAGACTACCATCTTCTGAAGCTGGCGTGGAGTCAAATATTTGAACAACGTAAAGGCATGGACAGTATGGGG                                                            ]
[-] EMBL CD080143             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATAAAGTCTAGCGTTTTTCCTTGTTTTGGGTCTGCATGAAGTTTGTTATAGTTAATTCTTACTTCATCCTTGAAACTTTGAATAAGTCGAGCAGCTTCCACTTTAGTCTTGCCCTTTACAGATATGCCATTGACACCAGTTATTTCGTCCCCAGCTTGAAGACTACCATCTTCTGAAGCTGGCGTGGAGTCAAATATTTGAACAACGTAAAGGCATGGACAGTATGGGGCTCCCCCTCCAATACTTATACCCACTAGATTCTCCTCGTGCCGAATTTTTGGCCCGAGGG]




>consensus_10462#0
CAGATGTAGGATATAATGCAACGCATATAGCTACCAACTTATATACTAAAGCAAAAGGAG
ACTACGAAGAGGCAACGGCGTGTGGCTTTATGTTTCTGAGTCATATTTCCTTTACTTTCA
CAAAGTACAACAGGCTATCCGTTTTAATTAACCTCAAAAATGCTTGTTTCGACTTCGAAA
TCAGTGTTATATCTAGTTCATCAAGAGCATGGGACGCAGTTGATGAATTACCAAACACGT
AAAAAATGAATCGTGCTGATTCTCCACGTTGAGTAGGTGAAGAGGCTAAACGACCACACT
TATGGTACATATGTAGATTTCGCAGATACGGGATATATCAGTGGCATTTGGTTCTAGAAC
CTTTGCTGTTGAAGCTTATTGTGTAATTTAATACAAGGCTAAAACATTGAAGGGTCCAGT
ATGTAACTTGGAGCGTTATTTAACGATACGAAATATATTTTAAAAGCTCGAATGGTTAGC
ATTAATTACGTATGTGTACGCGGAGAAATCCAGAGAAGTTGATGATGGGACGAAAAGAAA
CATTAGGAAGCGAATGAGTTTCGGTGAAGCGTTCTTTTAAATTAGGGGTTAGATCGTTTC
TAGACATCAAACGTGAGACAGAAGTGAGTTGTCAGAATTTCTTCGCACATGATTAACAGA
TTTTTTCATCGTTAAATTTGACTGACTATTTTTAACGTCTCCCGTCATTGTCTGGATATT
TATTTTGATTGTCTTCCTCATCGACCCCTCGAATGAATTAGTCAGGGAACACTACTGATA
AGTTAGGACTAAAAATAGGAAACAGAGGCCTGTTGGTTAGACCATTTCAATTCACATAAC
CAGAATTTTTCATCAGAACGTTGATCAGTAGCATCGAATCTGTAAAAGTGAGCATTATTA
ATCAACAATAGGAAATTCCAAGCTTTAATGATAAAGTATTTCTTATCAAATTAGATGACA
TACTGGCTTAATCTTATTCAACATTTCAATCGAAAAACGCTCCATACTTCGATGAATCGT
ACCAAACTGAGTAAATGCTTCGCTTGTGCATGCCATAGGCTCTTTAACACCAATTTCTGA
AAAGGTGTCTCCCAACACAGCATAGACACGAGAAAGTTCATAGATTGCACGTAACAATTT
TTTTGCATGATTTACCATACCCGAAAACACATTTGATGTTTTATTGAGTTCTTCCAACTT
TTTAACCATACCATCATTTACAAGAATAGCTCGGCTTTGACCTAAAGCATCGGCTGTACT
AGATTCCATTGTTTCAACAATACGATGTTTTACCTTTTTTAGTATTAAGTCTAGCGTTTT
TCCTTGTTTTGGGTCTGCATGAAGTTTGTTATAGTTAATTCTTACTTCATCCTTGAAACT
TTGAATAAGTCGAGCAGCTTCCACTTTAGTCTTGCCCTTTACAGATATGCCATTGACACC
AGTTATTTCGTCCCCAGCTTGAAGACTACCATCTTCTGAAGCTGGCGTGGAGTCAAATAT
TTGAACAACGTAAAGGCATGGACAGTATGGGGCTCCCCCTCCAATACTTATACCCACTAG
ATTCTCCTCGTGCCGAATTTTTGGCCCGAGGG

consensusID : consensus_10462#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 924
fasta sequence

                              [GAGGCTANATTCGGAACGAGGAGAGTACGGTTTTGCTATGGTTCAAGAACCACCATATCGTGTAGAAACTGGAAATTATGAATATAGACTTGTTTTAAGATGTCGACAGGATGCACGTACACGGTTCGCTAAGATGCGCAATGATGTTTTAGTAAAATTAGAATTGTTGGATAATAAACATGTACAAGATATTGTGTTTGAGTTACAACGTTTCATCGATGCTATGGCCACCTACCATGATCAGTGTTATGGTGTCATGAAGCAAATTAAAATTTTTCCACTTGAAGTGGATCTGGCTAGAGATGCATTTGCGTACAACCTAGGGATTTTTAATACAGGCGAAGATGAAGGTGGTGAAGATATCGATGAGGATGTAATCAGTGCTGAGTCAGTTGGAGAAAAATCTGTCAGTAGCAAGTATAACCAGTTAACTGACGATGTCAAATTAATAGACTTGGCAGGAATAAATCTCAATAGCCGATATTCTGATAATGAGGGTGATGACGAGGTGTTAGATATGAACAACTGGAACTCCTTATCTACTTGGGGTCCTCATACAGGCGACAGTAAGTCGAATAAACAGGATGCTGTTACAGACTTGCTTTGTTTCGACTAGTTATCGTCCTGCTTTGCATCATTAGTGTACATATACTATGAATCCTTTTTTTCATAAATATCTTTTGTAGTGATTGTACTGCATTCACTAAAAATGTGATATTTCTGCTTTGCTAAATTCCATGACTTAATTTCGTTTATTATTCGGTTTTGTTTTTTGTTTACTCTTTGTGGAATAATACCTACTAATAATTATCATACACTTTTCTTGCTACAGTATGTTTCATGTCTGAGGGGAATGGTTGTGCTACTGCGAATATTTTTCATCTAATATATAGTTGAACTGTTTGTTTATCTTAATAANAAGTT]

[+] EMBL CD081553             [GAGGCTANATTCGGAACGAGGAGAGTACGGTTTTGCTATGGTTCAAGAACCACCATATCGTGTAGAAACTGGAAATTATGAATATAGACTTGTTTTAAGATGTCGACAGGATGCACGTACACGGTTCGCTAAGATGCGCAATGATGTTTTAGTAAAATTAGAATTGTTGGATAATAAACATGTACAAGATATTGTGTTTGAGTTACAACGTTTCATCGATGCTATGGCCACCTACCATGATCAGTGTTATGGTGTCATGAAGCAAATTAAAATTTTTCCACTTGAAGTGGATCTGGCTAGAGATGCATTTGCGTACAACCTAGGGATTTTTAATACAGGCGAAGATGAAGGTGGTGAAGATATCGATGAGGATGTAATCAGTGCTGAGTCAGTTGGAGAAAAATCTGTCAGTAGCAAGTATAACCAGTTAACTGACGATGTCAAATTAATAGACTTGGCAGGAATAAATCTCAATAGCCGATATTCTGATAATGAGGGTGATGACGAGGTGTTAGATATGAACAACTGGAACTCCTTATCTACTTGGGGTCCTCATACAGGCGACAGTAAGTCGAATAAACAGGATGCTGTTACAGACTTGCTTTGTTTCGACTAGTTATCGTCCTGCTTTGCATCATTAGTGTACATATACTATGAATCCTTTTTTTCATAAATATCTTTTGTAGTGATTGTACTGCATTCACTAAAAATGTGATATTTCTGCTTTGCTAAATTCCATGACTTAATTTCGTTTATTATTCGGTTNTGTTTTTTGTTTACTCTTTGTGGAATAATACCTACTAATAATTATCATACACTTTTCTTGCTACAGTATGTTTCATGTCTGAGGGGAATGGTTGTGCTACTGCGAATATTTTTCATCTAATATATAGTTGAACTGTTTGTTTATCTTAATAANAAG  ]
[-] EMBL CD117219             [                                                                                                                                                                                                                                                                                                                  ATTTGCGTACAACCTAGGGATTTTTAATACAGGCGAAGATGAAGGCGGTGAAGATATCGATGAGGATGTAATCAGTGCTGAGTCAGTTGGAGAAAAATCTGTCAGTAGCAAGTATAACCAGTTAACTGACGATGTCAAATTAATAGACTTGGCAGGAATAAATCTCAATAGCCGATATTCTGATAATGAGGGTGATGACGAGGTGTTAGATATGAACAACTG                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD075378             [                                                                                                                                                                                                                                                                                                                                       TTTTAATACAGGCGAAGATGAAGGTGGTGAAGATATCGATGAGGATGTAATCAGTGCTGAGTCAGTTGGAGAAAAATCTGTCAGTAGCAAGTATAACCAGTTAACTGACGATGTCAAATTAATAGACTTGGCAGGAATAAATCTCAATAGCCGATATTCTGATAATGAGGGTGATGACGAGGTGTTAGATATGAACAACTGGAACTCCTTATCTACTTGGGGTCCTCATACAGGCGACAGTAAGTCGAATAAACAGGATGCTGTTACAGACTTGCTTTGTTTCGACTAGTTATCGTCCTGCTTTGCATCATTAGTGTACATATACTATGAATCCTTTTTTTCATAAATATCTTTTGTAGTGATTGTACTGCATTCACTAAAAATGTGATATTTCTGCTTTGCTAAATTCCATGACTTAATTTCGTTTATTATTCGGTTTTGTTTTTTGTTTACTCTTTGTGGAATAATACCTACTAATAATTATCATACACTTTTCTTGCTACAGTATGTTTCATGTCTGAGGGGAATGGTTGTGCTACTGCGAATATTTTTCATCTAATATATAGTTGAACTGTTTGTTTATCTTAATAAAAAGTT]
[-] EMBL CD114617             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGAACAACTGGAACTCCTNATCTACTTGGGGTCCTCATACAGGCGACAGTAAGTCGAATAAACAGGATGCTGTTACAGACTTGCTTTGTTTCGACTAGTTATCGTCCCGCTTTGCATCATTAGTGTACATATACTATGAATCCTTTTTTTCATAAATATCTTTTGTAGTGATTGTACTGCATTCACTAAAAATGTGATATTTCTGCTTTGCTAAATTCCATGACTTAATTTCGTTTATTATTCGGTTTTGTTTTTTGTTTACCCTTTGTGGAATAATACCTACTAATAATTATCATACACTTTTCTTGCTACA                                                                                             ]




>consensus_10462#1
GAGGCTANATTCGGAACGAGGAGAGTACGGTTTTGCTATGGTTCAAGAACCACCATATCG
TGTAGAAACTGGAAATTATGAATATAGACTTGTTTTAAGATGTCGACAGGATGCACGTAC
ACGGTTCGCTAAGATGCGCAATGATGTTTTAGTAAAATTAGAATTGTTGGATAATAAACA
TGTACAAGATATTGTGTTTGAGTTACAACGTTTCATCGATGCTATGGCCACCTACCATGA
TCAGTGTTATGGTGTCATGAAGCAAATTAAAATTTTTCCACTTGAAGTGGATCTGGCTAG
AGATGCATTTGCGTACAACCTAGGGATTTTTAATACAGGCGAAGATGAAGGTGGTGAAGA
TATCGATGAGGATGTAATCAGTGCTGAGTCAGTTGGAGAAAAATCTGTCAGTAGCAAGTA
TAACCAGTTAACTGACGATGTCAAATTAATAGACTTGGCAGGAATAAATCTCAATAGCCG
ATATTCTGATAATGAGGGTGATGACGAGGTGTTAGATATGAACAACTGGAACTCCTTATC
TACTTGGGGTCCTCATACAGGCGACAGTAAGTCGAATAAACAGGATGCTGTTACAGACTT
GCTTTGTTTCGACTAGTTATCGTCCTGCTTTGCATCATTAGTGTACATATACTATGAATC
CTTTTTTTCATAAATATCTTTTGTAGTGATTGTACTGCATTCACTAAAAATGTGATATTT
CTGCTTTGCTAAATTCCATGACTTAATTTCGTTTATTATTCGGTTTTGTTTTTTGTTTAC
TCTTTGTGGAATAATACCTACTAATAATTATCATACACTTTTCTTGCTACAGTATGTTTC
ATGTCTGAGGGGAATGGTTGTGCTACTGCGAATATTTTTCATCTAATATATAGTTGAACT
GTTTGTTTATCTTAATAANAAGTT

consensusID : consensus_10462#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 644
fasta sequence

                              [TTAACTGGTTATACTTGCTACTGACAGATTTTTCTCCAACTGACTCAGCACTGATTACATCCTCATCGATATCTTCACCGCCTTCATCTTCGCCTGTATTAAAAATCCCTAGGTTGTACGCAAATGCATCTCTAGCCAGATCCACTTCAAGTGGAAAAATTTTAATTTGCTTCATGACACCATAACACTGATCATGGTAGGTGGCCATAGCATCGATGAAACGTTGTAACTCAAACACAATATCTTGTACATGTTTATTATCCAACAATTCTAATTTTACTAAAACATCATTGCGCATCTTAGCGAACCGTGTACGTGCATCCTGTCGACATCTTAAAACAAGTCTATATTCATAATTTCCAGTTTCTACACGATATAGTGGTTCTTGAACCATAGCAAAACCGTACTCTTCATCGTCCATTTCCTTTACTTTAAGGCAATATGACAAATATTCAAATTTGACATCTAAATACTTTTTGATTGTTAACTTTGTATCAGGAACCGCTTTATGTAGAAATGTGTTTAAATCCATGATCATTGGCTTGATCTTTTTCAACATTTCAATCGAAAAACGCTCCATACTTCGATGAATCGTACCAAACTGAGTAAATGCTTCGCTTGTGCATGCCATAGGCTCTTTAACA]

[-] EMBL BF937007             [TTAACTGGTTATACTTGCTACTGACAGATTTTTCTCCAACTGACTCAGCACTGATTACATCCTCATCGATATCTTCACCGCCTTCATCTTCGCCTGTATTAAAAATCCCTAGGTTGTACGCAAATGCATCTCTAGCCAGATCCACTTCAAGTGGAAAAATTTTAATTTGCTTCATGACACCATAACACTGATCATGGTAGGTGGCCATAGCATCGATGAAACGTTGTAACTCAAACACAATATCTTGTACATGTTTATTATCCAACAATTCTAATTTTACTAAAACATCATTGCGCATCTTAGCGAACCGTGTACGTGCATCCTGTCGACATCTTAAAACAAGTCTATATTCATAATTTCCAGTTTCTACACGATATAGTGGTTCTTGAACCATAGCAAAACCGTACTCTTCATCGTCCATTTCCTTTACTTTAAGGCAATATGACAAATATTCAAATTTGACATCTAAATACTTTTTGATTGTTAACTTTGTATCAGGAACCGCTTTATGTAGAAATGTGTTTAAATCCAT                                                                                                                ]
[-] EMBL CD090222             [     TGGTTATACTTGCTACTGACAGATTTTTCTCCAACTGACTCAGCACTGATTACATCCTCATCGATATCTTCACCGCCTTCATCTTCGCCTGTATTAAAAATCCCTAGGTTGTACGCAAATGCATCTCTAGCCAGATCCACTTCAAGTGGAAAAATTTTAATTTGCTTCATGACACCATAACACTGATCATGGTAGGTGGCCATAGCATCGGTGAAACGTTGTAACTCAAACACAATATC                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD192474             [                                                                                                                                                                                                                                                                                                           TTAGCGAACCGTGTACGTGCATCCTGTCGACATCTTAAAACAAGTCTATATTCATAATTTCCAGTTTCTACACGATATAGTGGTTCTTGAACCATAGCAAAACCGTACTCTTCATCGTCCATTTCCTTTACTTTAAGGCAATATGACAAATATTCAAATTTGACATCTAAATACT                                                                                                                                                                          ]
[+] EMBL CD165449             [                                                                                                                                                                                                                                                                                                                      TGTACGTGCATCCTGTCGACATCTTAAAACAAGTCTATATTCATAATTTCCAGTTTCTACACGATATAGTGGTTCTTGAACCATAGCAAAACCGTACTCTTCATCGTCCATTTCCTTTACTTTAAGGCAATATGACAAATATTCAAATTTGACATCTAAATACTTTTTGATTGTTAACTTTGTATCAGGAACCGCTTTATGTAGAAATGTGTTTAAATCCATGATCATTGGCTTGATCTTTTTCAACATTTCAATCGAAAAACGCTCCATACTTCGATGAATCGTACCAAACTGAGTAAATGCTTCGCTTGTGCATGCCATAGGCTCTTTAACA]




>consensus_10462#2
TTAACTGGTTATACTTGCTACTGACAGATTTTTCTCCAACTGACTCAGCACTGATTACAT
CCTCATCGATATCTTCACCGCCTTCATCTTCGCCTGTATTAAAAATCCCTAGGTTGTACG
CAAATGCATCTCTAGCCAGATCCACTTCAAGTGGAAAAATTTTAATTTGCTTCATGACAC
CATAACACTGATCATGGTAGGTGGCCATAGCATCGATGAAACGTTGTAACTCAAACACAA
TATCTTGTACATGTTTATTATCCAACAATTCTAATTTTACTAAAACATCATTGCGCATCT
TAGCGAACCGTGTACGTGCATCCTGTCGACATCTTAAAACAAGTCTATATTCATAATTTC
CAGTTTCTACACGATATAGTGGTTCTTGAACCATAGCAAAACCGTACTCTTCATCGTCCA
TTTCCTTTACTTTAAGGCAATATGACAAATATTCAAATTTGACATCTAAATACTTTTTGA
TTGTTAACTTTGTATCAGGAACCGCTTTATGTAGAAATGTGTTTAAATCCATGATCATTG
GCTTGATCTTTTTCAACATTTCAATCGAAAAACGCTCCATACTTCGATGAATCGTACCAA
ACTGAGTAAATGCTTCGCTTGTGCATGCCATAGGCTCTTTAACA

consensusID : consensus_10462#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 264
fasta sequence

                              [ACAGCATAGACACGAGAAAGTTCATAGATTGCACGTAACAATTNTTTTGCATGATTTACCATACCCGAAAACACATTTGATGTTTTATTGAGTTCTTCCAACTTTTTAACCATACCATCATTTACAAGAATAGCTCGGCTTAGACCTAAAGCATCGGCTGTACTAGATTCCATTGTTTCAACAATACGATGTTTTACCTTTTTTAGTATTAAGTCTAGCGTTTTTCCTTGTTTTGGGTCTGCAGGAAGCCTCGTACGAATTCTG]

[-] EMBL CD077631             [ACAGCATAGACACGAGAAAGTTCATAGATTGCACGTAACAATTNTTTTGCATGATTTACCATACCCGAAAACACATTTGATGTTTTATTGAGTTCTTCCAACTTTTTAACCATACCATCATTTACAAGAATAGCTCGGCTTAGACCTAAAGCATCGGCTGTACTAGATTCCATTGTTTCAACAATACGATGTTTTACCTTTTTTAGTATTAAGTCTAGCGTTTTTCCTTGTTTTGGGTCTGCAGGAAGCCTCGTACGAATTCTG]




>consensus_10462#3
ACAGCATAGACACGAGAAAGTTCATAGATTGCACGTAACAATTNTTTTGCATGATTTACC
ATACCCGAAAACACATTTGATGTTTTATTGAGTTCTTCCAACTTTTTAACCATACCATCA
TTTACAAGAATAGCTCGGCTTAGACCTAAAGCATCGGCTGTACTAGATTCCATTGTTTCA
ACAATACGATGTTTTACCTTTTTTAGTATTAAGTCTAGCGTTTTTCCTTGTTTTGGGTCT
GCAGGAAGCCTCGTACGAATTCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10462#0      CAGATGTAGGATATAATGCAACGCATATAGCTACCAACTTATATACTAAAGCAAAAGGAG 60
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      ------------------------------------------------------------
                                                                                   

consensus_10462#0      ACTACGAAGAGGCAACGGCGTGTGGCTTTATGTTTCTGAGTCATATTTCCTTTACTTTCA 120
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      ------------------------------------------------------------
                                                                                   

consensus_10462#0      CAAAGTACAACAGGCTATCCGTTTTAATTAACCTCAAAAATGCTTGTTTCGACTTCGAAA 180
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      ------------------------------------------------------------
                                                                                   

consensus_10462#0      TCAGTGTTATATCTAGTTCATCAAGAGCATGGGACGCAGTTGATGAATTACCAAACACGT 240
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      ------------------------------------------------------------
                                                                                   

consensus_10462#0      AAAAAATGAATCGTGCTGATTCTCCACGTTGAGTAGGTGAAGAGGCTAAACGACCACACT 300
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      ------------------------------------------------------------
                                                                                   

consensus_10462#0      TATGGTACATATGTAGATTTCGCAGATACGGGATATATCAGTGGCATTTGGTTCTAGAAC 360
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      ------------------------------------------------------------
                                                                                   

consensus_10462#0      CTTTGCTGTTGAAGCTTATTGTGTAATTTAATACAAGGCTAAAACATTGAAGGGTCCAGT 420
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      ------------------------------------------------------------
                                                                                   

consensus_10462#0      ATGTAACTTGGAGCGTTATTTAACGATACGAAATATATTTTAAAAGCTCGAATGGTTAGC 480
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      ------------------------------------------------------------
                                                                                   

consensus_10462#0      ATTAATTACGTATGTGTACGCGGAGAAATCCAGAGAAGTTGATGATGGGACGAAAAGAAA 540
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      ------------------------------------------------------------
                                                                                   

consensus_10462#0      CATTAGGAAGCGAATGAGTTTCGGTGAAGCGTTCTTTTAAATTAGGGGTTAGATCGTTTC 600
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      ------------------------------------------------------------
                                                                                   

consensus_10462#0      TAGACATCAAACGTGAGACAGAAGTGAGTTGTCAGAATTTCTTCGCACATGATTAACAGA 660
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      ---------------------------------GAGGCTANATTCGGAACGAGGAGAGTA 27
                                                                                   

consensus_10462#0      TTTTTTCATCGTTAAATTTGACTGACTATTTTTAACGTCTCCCGTCATTGTCTGGATATT 720
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      CGGTTTTGCTATGGTTCAAGAACCACCATATCGTGTAGAAACTGGAAAT-TATGAATATA 86
                                                                                   

consensus_10462#0      TATTTTGATTGTCTTCCTCATCGACCCCTCGAATGAATTAGTCAGGGAACACTACTGATA 780
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      GACTTGTTTTAAGATGTCGACAGGATGCACGTACACGGTTCGCTAAGATGCGCAATGATG 146
                                                                                   

consensus_10462#0      AGTTAGGACTAAAAATAGGAAACAGAGGCCTGTTGGTTAGACCATTTCAATTCACATAAC 840
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------------------
consensus_10462#1      TTTTAGTAAAATTAGAATTGTTGGATAATAAACATGTACAAGATATTGTGTTTGAGTTAC 206
                                                                                   

consensus_10462#0      CAGAATTTTTCATCAGAACGTTGATCAGTAGCATCGAATCTGTAAAAGTGAGCATTATTA 900
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ------------------------------------------------TTAACTGGTTAT 12
consensus_10462#1      AACGTTTCATCGATGCTATGGCCACCTACCATGATCAGTGTTATGGTGTCA-TGAAGCAA 265
                                                                                   

consensus_10462#0      ATCAACAATAGGAAATTCCAAGCTTTAATGATAAAGTATTTCTTATCAAATTAGAT-GAC 959
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ACTTGCTACTGACAGATTTTTCTCCAACTGACTCAGCACTGATTA-CATCCTCATC-GAT 70
consensus_10462#1      ATTAAAATTTTTCCACTTGAAGTGGATCTGGCTAGAGATGCATTTGCGTACAACCTAGGG 325
                                                                                   

consensus_10462#0      ATACTGGCTTAATCTTATTCAACATTTCAATCGAAAAACGCTCCATACTTCGATGAATCG 1019
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      ATCTTCACC--GCCTTCATCTTCGCCTGTATTAAAAATCCCTAGGTTGTACGCAAATGCA 128
consensus_10462#1      ATTTTTAATACAGGCGAAGATGAAGGTGGTGAAGATATCGATGAGGATGTAATCAGTGCT 385
                                                                                   

consensus_10462#0      TACCAAACTGAGTAAATGCTTCGCTTGTGCATGC-CA-TAGGCTCTTTAACACCAATTTC 1077
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      TCTCTAGCCAGATCCACTTCAAGTGGAAAAATTT-TAATTTGCTTCATGACACCATAACA 187
consensus_10462#1      GAGTCAGTTGGAGAAAAATCTGTCAGTAGCAAGTATAACCAGTTAACTGACGATGTCAAA 445
                                                                                   

consensus_10462#0      TGAAAAGGTGTCTCCCAACACAGCATAGACACGAGAAAGTTCATAGATTGCACGTAACAA 1137
consensus_10462#3      -------------------ACAGCATAGACACGAGAAAGTTCATAGATTGCACGTAACAA 41
consensus_10462#2      CTGATCATGGTAGGTGGCCATAGCATCGAT----GAAACGTTGTAACTCAAACACAATA- 242
consensus_10462#1      TTAATAGACTTGGCAGGAATAAATCTCAATAGCCGATATTCTG-ATAATGAGGGTGATGA 504
                                            *   *  *     ** *      *           *   

consensus_10462#0      T----TTTTTTGCATGATTTACCATACCCGAAAACACATTTGATGTT-TTATTGAGTTCT 1192
consensus_10462#3      T----TNTTTTGCATGATTTACCATACCCGAAAACACATTTGATGTT-TTATTGAGTTCT 96
consensus_10462#2      -----TCTTGTACATG-TTTATTATCC-----AACAATTCTAATTTT-ACTAAAACATCA 290
consensus_10462#1      CGAGGTGTTAGATATGAACAACTGGAACTCCTTATCTACTTGGGGTCCTCATACAGGCGA 564
                            * **    ***    *            *      *    *        *     

consensus_10462#0      TCCAACTTTTTAACCATACCATCATTTACAAGAATAGCTCGGCTTTGACCTAAAGCA--T 1250
consensus_10462#3      TCCAACTTTTTAACCATACCATCATTTACAAGAATAGCTCGGCTTAGACCTAAAGCA--T 154
consensus_10462#2      TTGCGCATCTTAGCGA----ACCGTGTACGTGCAT--CCTGTCGACATCTTAAAACAAGT 344
consensus_10462#1      CAGTAAGTCGAATAAACAGGATGCTGTTACAGACTTGCTTTGTTTCGACTAGTTATCGTC 624
                              *   *   *    *   * *    *  *  *          *           

consensus_10462#0      CGGCTGTACTAGATTCCATTGTTTCAACAATACGATGTTTTACCTTTTTTAGTATTAAGT 1310
consensus_10462#3      CGGCTGTACTAGATTCCATTGTTTCAACAATACGATGTTTTACCTTTTTTAGTATTAAGT 214
consensus_10462#2      CTATATTCATAATTTCCAGTTTCTACACGATATAGTGGTTCTTGAACCATAGCA--AAAC 402
consensus_10462#1      CTGCTTTGCATCATT--AGTGTACATATACTATGAATCCTTTTTTTCATAAATATCTTTT 682
                       *     *      **  * * *    *   **       *          *  *      

consensus_10462#0      CTAGCGTTT---TTCCTTGTTTTGGGTCTGCATGAAGTTTGTTATAGTTAATTCTTACTT 1367
consensus_10462#3      CTAGCGTTT---TTCCTTGTTTTGGGTCTGCAGGAAGCCTCGTACG---AATTCTG---- 264
consensus_10462#2      CGTACTCTT---CATCGTCCATTTCCTTTACTTTAAGGC-AATATGACAAATATTCAAAT 458
consensus_10462#1      GTAGTGATTGTACTGCATTCACTAAAAATGTGATATTTCTGCTTTGCTAAATTCCATGAC 742
                              **      * *    *     *     *       *      ***        

consensus_10462#0      CATCCTTGAAACTTTGAATAAGTCGAGCAGCTTCCACTTTAGTCTTGCCCTTTACAGATA 1427
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      TTGACATCTAAATACTTTTTGATTGT-TAACTTTGTATCAGGAACCGCTTTATGTAGAAA 517
consensus_10462#1      TTAATTTCGTTTATTATTCGGTTTTGTTTTTTGTTTACTCTTTGTGGAATAATACCTACT 802
                                                                                   

consensus_10462#0      TGCCATTGACACCAGTTATTTCGTCCCCAGCTTGAAGACTACCATCTTCTGAAGCTGGCG 1487
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      TGTGTTTAAATCCATGATCATTGGCTTGATCTTTTTCAACATTTCAATCGAAAAACGCTC 577
consensus_10462#1      AATAATTATCATACACTTTTCTTGCTACAGTATGTTTCATGTCTGAGGGGAATGGTTGTG 862
                                                                                   

consensus_10462#0      TGGAGTCAAAT--ATTTGAACAACGTAAAGGCATGGACAGTATGGGGCTCCCCCTCCAAT 1545
consensus_10462#3      ------------------------------------------------------------
consensus_10462#2      CATACTTCGATGAATCGTACCAAACTGAGTAAATGCTTCGCTTGTGCATGCCATAGGCTC 637
consensus_10462#1      CTACTGCGAATATTTTTCATCTAA-TATATAGTTGAACTGTTTGTTTATCTTAATAANAA 921
                                                                                   

consensus_10462#0      ACTTATACCCACTAGATTCTCCTCGTGCCGAATTTTTGGCCCGAGGG 1592
consensus_10462#3      -----------------------------------------------
consensus_10462#2      TTTAACA---------------------------------------- 644
consensus_10462#1      GTT-------------------------------------------- 924