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Schistosoma mansoni
cluster # 10474 cluster # 10474       Sequences # 17       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10474#0 length = 1792 sequences # 12  
 consensus_10474#1 length = 754 sequences # 4  
consensus_10474#2 length = 159 sequences # 1  
consensusID : consensus_10474#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1792
fasta sequence 
                              [ATTATTAACAGGTCATTTTCAACTATTCTGCTGTAAACAACGAGAATGGCGCTGCTTTCATTCACTGTCACCTGGTTACTGCTTTTTCAACAGAAGTACATAAATGCCGAATACTACACTGCCGTTGTTGATATAACGAAAGCATGGAGGTTAAGTCAAGAACTAGTTTCCGATCTAAATTCTTACATTGCCCTTGAAGAGGGGCGTCTTAATCGTATTCGGAAAGTTGTCAAAGTGTTGGATTCTAATGNGTCAATTAGTGACGCCTCGTCAACACTAAATCAACAGAATAATGACCTAGAAGAATATTTAGGCAATCCGATAAATGCTTATCTTACGATGAAGCGTCTTTCATCAAGTTGGAAATCACAACTCAGTCAACTTGTTGACAATGTACCGAACGGTTTTCAGAAGGGTGATACTGATGGGTCAGACTATTTGAATATTTCTGATGCTCAAAACACCATCACAATGAATACAATTCGATCACGTGTTAAACAACATACAGATATGCTACCTGGTGATAATGATGTCAGTGGTGCAGTAGATGCAATTCTACGCTTACAGTCTACATATAAACTACCAGCTAGACGACTTGCTTACGGTCAGTTAATTGATAATCTATCAACTCCTCAACTGAGTGCTGCTCAATGCTTGGAAGTAGGTAGACATGCCTATTTACAGGGCGATTTTGAGCAATCAGAAGAATGGTTTCGTGTAGCCTATGATCGGTTATTTGATGAGTTAGAAGAAAAACGAGAGGTTGATGCACAAGGAACTA-CCATTGCAAATGACGAAACTGAAGAAAATGGAGAAACTGAACCGACAGTTGGACAAATTTTAGACTATCTTGCCTATTCTCTTGGACGACAAGGAAGATATGCTGAAGCACTGAACGTGACACGTTTGCTAATTGAAGAGGAACCGACGAATACAAGAGCTATCAATAATGAAGCCTACTATGTGGAACAAATAGACAGAGGTGAAGGAAGAATCGGTCCGAATCCTCGTTCTCAAGCTATATCAAAGCACGATCAAGAGACTGAGCTATACGAATCATTATGTCGTAATGAAAATCCCTTCCCTACAGTCCCGTCACATCACCTAACATGTCGATATTATACTCCTCATGCGTTTTTTAAAATTGGTCCAGTTAAGGAGGAAACTTTAAACCCTGATCCACGTATTGTAATGTGGTACGATTTGATTTTTCCATCGGAGATTG-AAAAAATCAAAGAGCTGGCTACACCAAGACTTCGTAGAGCGACGGTTAAAAATCCGGTAACTGGCATCTTGGAGATAGCTTTTTATAGAACCAGTAAAAGCGCTTGGCTTCCGCATTCTATGAGTGAAATTACTGACCAGATAAGTCAGCGTATACGAGCTGTTACAGGTTTGTCTCTTGAGACTGCTGAAG-ATCTACAAGTCGGTAATTATGGTTTGGGTGGACATTATGCTCCACATTTTGATTTTGGTCGAAAAAGAGAAAAGGACGCATTCGAAGTTAAAAATGGGAACAGGATAGCTACAATTATTTTTTATTTATCTGATGTACAAGCAGGAGGAGCCACTGTATTTAA---TATC-GTACACGTGTTGTCCCTAAAAAGGAGCCGCTGGTTTCTGGTTTAAATCTTTGCAANTGGAGAANGTGACTACGACTANAACGCTGCTTGCCAGTTCTAGCTGGCTCAAATGGGTATGAATCTATGGTNATGAACGCGTCAGATTTCGANACATGTGATANAGCGTGGAACGTGACAGAGAGACTTAANNNTATCACTATCTTCGAATT]

[+] EMBL CD158080             [ATTATTAACAGGTCATTTTCAACTATTCTGCTGTAAACAACGAGAATGGCGCTGCTTTCATTCACTGTCACCTGGTTACTGCTTTTTCAACAGAAGTACATAAATGCCGAATACTACACTGCCGTTGTTGATATAACGAAAGCATGGAGGTTAAGTCAAGAACTAGTTTCCGATCTAAATTCTTACATTGCCCTTGAAGAGGGGCGTCTTAATCGTATTCGGAAAGTTGTCAAAGTGTTGGATTCTAATGNGTCAATTAGTGACGCCTCGTCAACACTAAATCAACAGAATAATGACCTAGAAGAATATTTAGGCAATCCGATAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD187437             [                                                                                                                                                                     GTTTCCGATCTAAATTCTTACATTGCCCTTGAAGAGGGGCGTCTTAATCGTATTCGGAAAGTTGTCAAAGTGTTGGATTCTAATGGGTCAATTAGTGACGCCTCGTCAACACTAAATCAACAGAATAATGACCTAGAAGAATATTTAGGCAATCCGATAAATGCTTATCTTACGATGAAGCGTCTTTCATCAAGTTGGAAATCACAACTCAGTCAACTTGTTGACAATGTACCGAACGGTTTTCAGAAGGGTGATACTGATGGGTCAGACTATTTGAATATTTCTGATGCTCAAAACACCATCACAATGAATACAATTCGATCACGTGTTAAACAACATACAGATATGCTACCTGGTGATAATGATGTCAGTGGTGCAGTAGATGCAATTCTACGCTTACAGTCTACATATAAACTACCAGCTAGACGACTTGCTTACGGTCAGTTAATTGATAATCTATCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD191798             [                                                                                                                                                                                                                                                                                                                                                              TTCATCAAGTTGGAAATCACAACTCAGTCAACTTGTTGACAATGTACCGAACGGTTTTCAGAAGGGTGATACTGATGGGTCAGACTATTTGAATATTTCTGATGCTCAAAACACCATCACAATGAATACAATTCGATCACGTGTTAAACAACATACAGATATGCTACCTGGTGATAATGATGTCAGTGGTGCAGTAGATGCAATTCTACGCTTACAGTCTACATATAAACTACCAGCTAGACGACTTGCTTACGGTCAGTTAATTGATAATCTATCAACTCCTCAACTGAGTGCTGCTCAATGCTTGGAAGTAGGTAGACATGCCTATTTACAGGGCGATTTTGAGCAATCAGAAGAATGGTTTCGTGTAGCCTATGATCGGTTATTTGATGAGTTAGAAGAAAAACGAGAGGTTGATGCACAAGGAACTANCCATTGC AATGACGAAACTGAAGAAAATGGAGAAACTGAACCGACAGTTGGACAAATTTTAGACTATCTTGCCTATTCTCTTGGACGACAAGGAAGATATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD191728             [                                                                                                                                                                                                                                                                                                                                                              TTCATCAAGTTGGAAATCACAACTCAGTCAACTTGTTGACAATGTACCGAACGGTTTTCAGAAGGGTGATACTGATGGGTCAGACTATTTGAATATTTCTGATGCTCAAAACACCATCACAATGAATACAATTCGATCACGTGTTAAACAACATACAGATATGCTACCTGGTGATAATGATGTCAGTGGTGCAGTAGATGCAATTCTACGCTTACAGTCTACATATAAACTACCAGCTAGACGACTTGCTTACGGTCAGTTAATTGATAATCTATCAACTCCTCAACTGAGTGCTGCTCAATGCTTGGAAGTAGGTAGACATGCCTATTTACAGGGCGATTTTGAGCAATCAGAAGAATGGTTTCGTGTAGCCTATGATCGGTTATTTGATGAGTTAGAAGAAAAACGAGAGGTTGATGCACAAGGAACTA CCATTGNCAATGACGAAACTGAAGAAAATGGAGAAACTGAACCGACAGTTGGACAAATTTTAGACTATCTTGCCTATTCTCTTGGACGACAAGGAAGATATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD184511             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GATGCAATTCTACGCTTACAGTCTACATATAAACTACCAGCTAGACGACTTGCTTACGGTCAGTTAATTGATAATCTATCAACTCCTCAACTGAGTGCTGCTCAATGCTTGGAAGTAGGTAGACATGCCTATTTACAGGGCGATTTTGAGCAATCAGAAGAATGGTTTCGTGTAGCCTATGATCGGTTATTTGATGAGTTAGAAGAAAAACGAGAGGTTGATGCACAAGGAACTA CCATTGCAAATGACGAAACTGAAGAAAATGGAGAAACTGAACCGACAGTTGGACAAATTTTAGACTATCTTGCCTATTCTCTTGGACGACAAGGAAGATATGCTGAAGCACTGAACGTGACACGTTTGCTAATTGAAGAGGAACCGACGAATACAAGAGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD190962             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATATAAACTACCAGCTAGACGACTTGCTTACGGTCAGTTAATTGATAATCTATCAACTCCTCAACTGAGTGCTGCTCAATGCTTGGAAGTAGGTAGACATGCCTATTTACAGGGCGATTTTGAGCAATCAGAAGAATGGTTTCGTGTAGCCTATGATCGGTTATTTGATGAGTTAGAAGAAAAACGAGAGGTTGATGCACAAGGAACTA CCATTGCAAATGACGAAACTGAAGAAAATGGAGAAACTGAACCGACAGTTGGACAAATTTTAGACTATCTTGCCTATTCTCTTGGACGACAAGGAAGATATGCTGAAGCACTGAACGTGACACGTTTGCTAATTGAAGAGGAACCGACGAATACAAGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD146008             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAATGACGAAACTGAAGAAAATGGAGAAACTGAACCGACAGTTGGACAAATTTTAGACTATCTTGCCTATTCTCTTGGACGACAAGGAAGATATGCTGAAGCACTGAACGTGACACGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD082143             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTCTCTTGGACGACAAGGAAGATATGCCTAAGCACTGAACGTGACACGTTTGCTAATTGAAGAGGAACCGACGAATACAAGAGCTATCAATAATGAAGCCTACTATGTGGAACAAATAGACAGAGGTGAAGGAAGAATCGGTCCGAATCCTCGTTCTCAAGCTATATCAAAGCACGATCAAGAGACTGAGCTATACGAATCATTATGTCGTAATGAAAATCCCTTCCCTACAGTCCCGTCACATCACCTAACATGTCGATATTATACTCCTCATGCGTTTTTTAAAATTGGTCCAGTTAAGGAGGAAACTTTAAACCCTGATCCACGTATTGTAATGTGGTACGATTTGATTTTTCCATCGGAGATTG AAAAAATCAAAGAGCTGGCTACACCAAGACTTCGTAGAGCGACGGTTAAAAATCCGGTAACTGGCATCTTGGAGATAGCTTTTTATAGAACCAGTAAAAGCGCTTGGCTTCCGCATTCTATGAGTGAAATTACTGACCAGATAAGTCAGCGTATACGAGCTGTTACAGGTTTGTCTCTTGAGACTGCTGAAG ATCTACAAGTCGGTAATTATGGTTTGGGTGGACATTATGCTCCACATTNTGATTNTGGTCGAAAAAGAGAAAAGGACGCATTCGAAGTTAAAAATGGGAACAGGATAGCTACAATTATTTTTTATTTATCTGATGTACAAGCAGGAGGAGCCACTGTATTTAA   TATC GTACACGTGTTGTCCCTAAAAAGGAGCCGCTGGTTTCTGGTTTAAATCTTTGCAANTGGAGAANGTGACTACGACTANAACGCTGCTTGCCAGTTCTAGCTGGCTCAAATGGGTATGAATCTATGGTNATGAACGCGTCAGATTTCGANACATGTGATANAGCGTGGAACGTGACAGAGAGACTTAANNNTATCACTATCTTCGAATT]
[+] EMBL CD135604             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTGAAGAGGAACCGACGAATACAAGAGCTATCAATAATGAAGCCTACTATGTGGAACAAATAGACAGAGGTGAAGGAAGAATCGGTCCGAATCCTCGTTCTCAAGCTATATCAAAGCACGATCAAGAGACTGAGCTATACGAATCATTATGTCGTAATGAAAATCCCTTCCCTACAGTCCCGTCACATCACCTAACATGTCGATATTATACTCCTCATGCGTTTTTTAAAATTGGTCCAGTTCAGGAGGAAACTTTAAACCCTGATCCACGTATTGTAATGTGGTACGATTTGATTTTTCCATCGGAGATTG AAAAAATCAAAGAGCTGGCTACACCAAGACTTCGTAGAGCGACGGTTAAAAATCCGGTAACTGGCATCTTGGAGATAGCTTTTTATAGAACCAGTAAAAGCGCTTGGCTTCCGCATTCTATGAGTGAAATTACTGACCAGATAA                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD131739             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGCCTACTATGTGGAACAAATAGACAGAGGTGAAGGAAGAATCGGTCCGAATCCTCGTTCTCAAGCTATGTCAAAGCACGATCAAGAGACTGAGCTATACGAATCATTATGTCGTAATGAAAATCCCTTCCCTACAGTCCCGTCACATCACCTAACATGTCGATATTATACTCCTCATGCGTTTTTTAAAATTGGTCCAGTTAAGGAGGAAACTTTAAACCCTGATCCACGTATTGTAATGTGGTACGATTTGATTTTTCCATCGGAGATTG AAAAAATCAAAGAGCTGGCTACACCAAGACTTCGTAGAGCGACGGTTAAAAATCCGGTAACTGGCATCTTGGAGATAGCTTTTTATAGAACCAGTAAAAGCGCTTGGCTTCCGCATTCTATGAGTGAAATTACTGACCAGATAAGTCAGCGTATACGAGCTGTTACAGGTTTGTCTCTTGAGACTGCTGAAGAATCTAC AGTCGGTAA                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD079228             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGAATCGGTCCGAATCCTCGTTCTCAAGCTATATCAAAGCACGATCAAGAGACTGAGCTATACGAATCATTATGTCGTAATGAAAATCCCTTCCCTACAGTCCCGTCACATCACCTAACATGTCGATATTATACTCCTCATGCGTTTTTTAAAATTGGTCCAGTTAAGGAGGAAACTTTAAACCCTGATCCACGTATTGTAATGTGGTACGATTTGATTTTTCCATCGGAGATTG AAAAAATCAAAGAGCTGGCTACACCAAGACTTCGTAGAGCGACGGTTAAAAATCCGGTAACTGGCATCTTGGAGATAGCTTTTTATAGAACCAGTAAAAGCGCTTGGCTTCCGCATTCTATGAGTGAAATTACTGACCAGATAAGTCAGCGTATACGAGCTGTTACAGGTTTGTCTCTTGAGACTGCTGAAG ATCTACAAGTCGGTAATTATGGTTTGGGTGGACATTATGCTCCACATTTTGATTTTGGTCGAAAAAGAGAAAAGGACGCATTCGAAGTTAAAAATGGGAACAGGATAGCTACAATTATTTTTTATTTATCTGATGTACAAGCAGGAGGAGCCACTGTATTTAACCGTATCGGTACACGTGTTGTCCCTAAAAAGGAGCC                                                                                                                                                                                    ]
[-] EMBL CD114053             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACATCACCTAACATGTCGATATTATACTCCTCATGCGTTTTTTAAAATTGGTCCAGTTAAGGAGGAAACTTTAAACCCTGATCCACGTATTGTAATGTGGTACGATTTGATTTTTCCATCGGAGATTGAAAAAAATCAAAGAGCTGGCTACACCAAGACTTCGTAGAGCGACGGTTAAAAATCCGGTAACTGGCATCTTGGAGATAGCTTTTTATAGAACCAGTAAAAGCGCTTGGCTTCCGCATTCTATGAGTGAAATTACTGACCAGATAAGTCAGCGTATACGAGCTGTTACAGGTTTGTCTCTTGAGACTGCTGAAG ATCAACAAGTCGGTAATTATGGTTTGGGTGGACATTATGCTCCACATTTTGATTTTGGTCGAAAAAGAGAAAAGGACGCATT                                                                                                                                                                                                                                                                                                         ]




>consensus_10474#0
ATTATTAACAGGTCATTTTCAACTATTCTGCTGTAAACAACGAGAATGGCGCTGCTTTCA
TTCACTGTCACCTGGTTACTGCTTTTTCAACAGAAGTACATAAATGCCGAATACTACACT
GCCGTTGTTGATATAACGAAAGCATGGAGGTTAAGTCAAGAACTAGTTTCCGATCTAAAT
TCTTACATTGCCCTTGAAGAGGGGCGTCTTAATCGTATTCGGAAAGTTGTCAAAGTGTTG
GATTCTAATGNGTCAATTAGTGACGCCTCGTCAACACTAAATCAACAGAATAATGACCTA
GAAGAATATTTAGGCAATCCGATAAATGCTTATCTTACGATGAAGCGTCTTTCATCAAGT
TGGAAATCACAACTCAGTCAACTTGTTGACAATGTACCGAACGGTTTTCAGAAGGGTGAT
ACTGATGGGTCAGACTATTTGAATATTTCTGATGCTCAAAACACCATCACAATGAATACA
ATTCGATCACGTGTTAAACAACATACAGATATGCTACCTGGTGATAATGATGTCAGTGGT
GCAGTAGATGCAATTCTACGCTTACAGTCTACATATAAACTACCAGCTAGACGACTTGCT
TACGGTCAGTTAATTGATAATCTATCAACTCCTCAACTGAGTGCTGCTCAATGCTTGGAA
GTAGGTAGACATGCCTATTTACAGGGCGATTTTGAGCAATCAGAAGAATGGTTTCGTGTA
GCCTATGATCGGTTATTTGATGAGTTAGAAGAAAAACGAGAGGTTGATGCACAAGGAACT
ACCATTGCAAATGACGAAACTGAAGAAAATGGAGAAACTGAACCGACAGTTGGACAAATT
TTAGACTATCTTGCCTATTCTCTTGGACGACAAGGAAGATATGCTGAAGCACTGAACGTG
ACACGTTTGCTAATTGAAGAGGAACCGACGAATACAAGAGCTATCAATAATGAAGCCTAC
TATGTGGAACAAATAGACAGAGGTGAAGGAAGAATCGGTCCGAATCCTCGTTCTCAAGCT
ATATCAAAGCACGATCAAGAGACTGAGCTATACGAATCATTATGTCGTAATGAAAATCCC
TTCCCTACAGTCCCGTCACATCACCTAACATGTCGATATTATACTCCTCATGCGTTTTTT
AAAATTGGTCCAGTTAAGGAGGAAACTTTAAACCCTGATCCACGTATTGTAATGTGGTAC
GATTTGATTTTTCCATCGGAGATTGAAAAAATCAAAGAGCTGGCTACACCAAGACTTCGT
AGAGCGACGGTTAAAAATCCGGTAACTGGCATCTTGGAGATAGCTTTTTATAGAACCAGT
AAAAGCGCTTGGCTTCCGCATTCTATGAGTGAAATTACTGACCAGATAAGTCAGCGTATA
CGAGCTGTTACAGGTTTGTCTCTTGAGACTGCTGAAGATCTACAAGTCGGTAATTATGGT
TTGGGTGGACATTATGCTCCACATTTTGATTTTGGTCGAAAAAGAGAAAAGGACGCATTC
GAAGTTAAAAATGGGAACAGGATAGCTACAATTATTTTTTATTTATCTGATGTACAAGCA
GGAGGAGCCACTGTATTTAATATCGTACACGTGTTGTCCCTAAAAAGGAGCCGCTGGTTT
CTGGTTTAAATCTTTGCAANTGGAGAANGTGACTACGACTANAACGCTGCTTGCCAGTTC
TAGCTGGCTCAAATGGGTATGAATCTATGGTNATGAACGCGTCAGATTTCGANACATGTG
ATANAGCGTGGAACGTGACAGAGAGACTTAANNNTATCACTATCTTCGAATT

consensusID : consensus_10474#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 754
fasta sequence 
                              [TACACCAAGACTTCGTAGAGCGACGGTTAAAAATCCGGTAACTGGCATCTTGGAGATAGCTTTTTATAGAACCAGTAAAAGCGCTTGGCTTCCGCATTCTATGAGTGAAATTACTGACCAGATAAGTCAGCGTATACGAGCTGTTACAGGTTTGTCTCTTGAGACTGCTGAAGATCTACAAGTCGGTAATTATGGTTTGGGTGGACATTATGCTCCACATTTTGATTTTGGTCGAAAAAGAGAAAAGGACGCATTCGAAGTTAAAAATGGGAACAGGATAGCTACAATTATTTTTTATTTATCTGATGTACAAGCAGGAGGAGCCACTGTATTTAACCGTATCGGTA-CACGTGTTGTCCCTAAAAAAGGAGCCGCTGGTTTCTGGTTTAATCTTTTGCCAAATGGAGAAGGTGACCTACGAACTAGACACGCTGCTTGCCCAGTTCTAGCTGGCTCAAAATGGGTAATGAATCTATGGTTTCATGAACGCGGTCAAGAATTTCGTAGACCATGTGAATTAGAGCGTGGGACAGTTGAAACAGATGATGACTTTTAAATATAATCCACCTTTATTCTTTCGA-AAATTATACATC-TACTCAATTATATGTTCAATGTTTTGTTTTATATTCACTCTGTTACTGCCAACTAAACTAAGCATTGATGATTTTGTTAAATCACTTTTGAAATGTTTAGTTTCATTCAAAACAATAAATTAGTACATATAGTGGATACTTCAATGTGTAAAATATAATCA]

[-] EMBL CD075760             [TACACCAAGACTTCGTAGAGCGACGGTTAAAAATCCGGTAACTGGCATCTTGGAGATAGCTTTTTATAGAACCAGTAAAAGCGCTTGGCTTCCGCATTCTATGAGTGAAATTACTGACCAGATAAGTCAGCGTATACGAGCTGTTACAGGTTTGTCTCTTGAGACTGCTGAAGATCTACAAGTCGGTAATTATGGTTTGGGTGGACATTATGCTCCACATTTTGATTTTGGTCGAAAAAGAGAAAAGGACGCATTCGAAGTTAAAAATGGGAACAGGATAGCTACAATTATTTTTTATTTATCTGATGTACAAGCAGGAGGAGCCACTGTATTTAA   TATCGGTA CACGTGTTGTCCCTAAAAAAGGAGCCGCTGGTTTCTGGTTTAATCTTTTGCCAAATGGAGAAGGTGACCTACGAACTAGACACGCTGCTTGCCCAGTTCTAGCTGGCTCAAAATGGGTAATGAATCTATGGTTTCATGAACGCGGTCAAGAATTTCGTAGACCATGTGAATTAGAGCGTGGGACAGTTGAAACAGATGATGACTTTTAAATATAATCCACCTTTATTCTTTCGA AAATTATACATC                                                                                                                                                                  ]
[-] EMBL CD075626             [                                                                                                                                              GTTACAGGTTTGTCTCTTGAGACTGCTGAAGATCTACAAGTCGGTAATTATGGTTTGGGTGGACATTATGCTCCACATTTTGATTTTGGTCGAAAAAGAGAAAAGGACGCATTCGAAGTTAAAAATGGGAACAGGATAGCTACAATTATTTTTTATTTATCTGATGTACAAGCAGGAGGAGCCACTGTATTTAACCGTATCGGTA CACGTGTTGTCCCTAAAAAAGGAGCCGCTGGTTTCTGGTTTAATCTTTTGCCAAATGGAGAAGGTGACCTACGAACTAGACACGCTGCTTGCCCAGTTCTAGCTGGCTCAAAATGGGTAATGAATCTATGGTTTCATGAACGCGGTCAAGAATTTCGTAGACCATGTGAATTAGAGCGTGGGACAGTTGAAACAGATGATGACTTTTAAATATAATCCACCTTTATTCTTTCGA AAATTATACATC TACTCAATTATATGTTCAATGTTTTGTTTTATATTCACTCTGTTACTGCCAACTAAACTAAGCATTGATGATTTTGTTAAATCACTTTTGAAATGTTTAGTTTCATTCAAAACAATAAATTAGTACATATAGTGGATACTTCAATGTGTAAAATATAATCA]
[-] EMBL CD076982             [                                                                                                                                                               TGAGACTGCTGAAGATCTACAAGTCGGTAATTATGGTTTGGGTGGACATTATGCTCCACATTTTGATTTTGGTCGAAAAAGAGAAAAGGACGCATTCGAAGTTAAAAATGGGAACAGGATAGCTACAATTATTTTTTATTTATCTGATGTACAAGCAGGAGGAGCCACTGTATTTAACCGTATCGGTA CACGTGTTGTCCCTAAAAAAGGAGCCGCTGGTTTCTGGTTTAATCTTTTGCCAAATGGAGAAGGTGACCTACGAACTAGACACGCTGCTTGCCCAGTTCTAGCTGGCTCAAAATGGGTAATGAATCTATGGTTTCATGAACGCGGTCAAGAATTTCGTAGACCATGTGAATTAGAGCGTGGGACAGTTGAAACAGATGATGACTTTTAAATATAATCCACCTTTATTCTTTCGANAAATTATACATCNTACTCAATTATATGTTCAATGTTTTGTTTTATATTCACTCTGTTACTGCCAACTAAACTAAGCATTGATGATTTTGTTAAATCACTTTTGAAATGTTTAGTTTCATTCAAAACAATAAATTAGTACATATAGTGGATACTTCAATGTGTAAGATATAATCA]
[+] EMBL CD145035             [                                                                                                                                                                                                                                                                                     ATAGCTACAATTATTTTTTATTTATCTGATGTACAAGCAGGAGGAGCCACTGTATTTAACCGTATCGGTAGCACGTGTTGTCCCTAAAAAAGGAGCCGCTGGTTTCTGGTTTAATCTTTTGCCAAATGGAGAAGGTGACCTACGAACTAGACACGCTGCTTGCCCAGTTCTAGCTGGCTCAAAATGGGTAATGAATCTATGGTTTCATGAACGCGGTCAAGAATTTCGTAGACCATGTGAATTAGAGCGTGGGACAGTTGAAACAGATGATGACTTTTAAATATAATCCACCTTTATTCTTTCGA AAATTATACATC TACTCAATTATATGTTCAATGTTTTGT                                                                                                                                      ]




>consensus_10474#1
TACACCAAGACTTCGTAGAGCGACGGTTAAAAATCCGGTAACTGGCATCTTGGAGATAGC
TTTTTATAGAACCAGTAAAAGCGCTTGGCTTCCGCATTCTATGAGTGAAATTACTGACCA
GATAAGTCAGCGTATACGAGCTGTTACAGGTTTGTCTCTTGAGACTGCTGAAGATCTACA
AGTCGGTAATTATGGTTTGGGTGGACATTATGCTCCACATTTTGATTTTGGTCGAAAAAG
AGAAAAGGACGCATTCGAAGTTAAAAATGGGAACAGGATAGCTACAATTATTTTTTATTT
ATCTGATGTACAAGCAGGAGGAGCCACTGTATTTAACCGTATCGGTACACGTGTTGTCCC
TAAAAAAGGAGCCGCTGGTTTCTGGTTTAATCTTTTGCCAAATGGAGAAGGTGACCTACG
AACTAGACACGCTGCTTGCCCAGTTCTAGCTGGCTCAAAATGGGTAATGAATCTATGGTT
TCATGAACGCGGTCAAGAATTTCGTAGACCATGTGAATTAGAGCGTGGGACAGTTGAAAC
AGATGATGACTTTTAAATATAATCCACCTTTATTCTTTCGAAAATTATACATCTACTCAA
TTATATGTTCAATGTTTTGTTTTATATTCACTCTGTTACTGCCAACTAAACTAAGCATTG
ATGATTTTGTTAAATCACTTTTGAAATGTTTAGTTTCATTCAAAACAATAAATTAGTACA
TATAGTGGATACTTCAATGTGTAAAATATAATCA

consensusID : consensus_10474#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 159
fasta sequence 
                              [TCGAGGCCAGNATTCGGCACGAGGAATGACGAAACTGAAGAAAATGGAGAAACTGAACCGACAGTTGGACAAATTTTAGACTATCTTGCCTATTCTCTTGNGACGACAGGAAGATATGCTGAAGCACTGAACGTGACACGTTTGCTAATTTGAGAGGAC]

[+] EMBL CD082011             [TCGAGGCCAGNATTCGGCACGAGGAATGACGAAACTGAAGAAAATGGAGAAACTGAACCGACAGTTGGACAAATTTTAGACTATCTTGCCTATTCTCTTGNGACGACAGGAAGATATGCTGAAGCACTGAACGTGACACGTTTGCTAATTTGAGAGGAC]




>consensus_10474#2
TCGAGGCCAGNATTCGGCACGAGGAATGACGAAACTGAAGAAAATGGAGAAACTGAACCG
ACAGTTGGACAAATTTTAGACTATCTTGCCTATTCTCTTGNGACGACAGGAAGATATGCT
GAAGCACTGAACGTGACACGTTTGCTAATTTGAGAGGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10474#0      ATTATTAACAGGTCATTTTCAACTATTCTGCTGTAAACAACGAGAATGGCGCTGCTTTCA 60
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      TTCACTGTCACCTGGTTACTGCTTTTTCAACAGAAGTACATAAATGCCGAATACTACACT 120
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      GCCGTTGTTGATATAACGAAAGCATGGAGGTTAAGTCAAGAACTAGTTTCCGATCTAAAT 180
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      TCTTACATTGCCCTTGAAGAGGGGCGTCTTAATCGTATTCGGAAAGTTGTCAAAGTGTTG 240
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      GATTCTAATGNGTCAATTAGTGACGCCTCGTCAACACTAAATCAACAGAATAATGACCTA 300
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      GAAGAATATTTAGGCAATCCGATAAATGCTTATCTTACGATGAAGCGTCTTTCATCAAGT 360
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      TGGAAATCACAACTCAGTCAACTTGTTGACAATGTACCGAACGGTTTTCAGAAGGGTGAT 420
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      ACTGATGGGTCAGACTATTTGAATATTTCTGATGCTCAAAACACCATCACAATGAATACA 480
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      ATTCGATCACGTGTTAAACAACATACAGATATGCTACCTGGTGATAATGATGTCAGTGGT 540
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      GCAGTAGATGCAATTCTACGCTTACAGTCTACATATAAACTACCAGCTAGACGACTTGCT 600
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      -------------------------TACACCAAGACTTCGTAGAGCGACGGTTAAAAATC 35
                                                                                   

consensus_10474#0      TACGGTCAGTTAATTGATAATCTATCAACTCCTCAACTGAGTGCTGCTCAATGCTTGGAA 660
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      CGGTAACTGGCATCTTGGAGATAGCTTTTTATAGAACCAGTAAAAGCGCTTGGCTTCCGC 95
                                                                                   

consensus_10474#0      GTAGGTAGACATGCCTATTTACAGGGCGATTTTGAGCAATCAGAAGAATGGTTTCGTGTA 720
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ATTCTATGAGTGAAATTACTGACCAGATAAGTCAGCGTATACGAGCTGTTACAGGTTTGT 155
                                                                                   

consensus_10474#0      GCCTATGATCGGTTATTTGATGAGTTAGAAGAAAAACGAGAGGTTGATGCACAAGGAACT 780
consensus_10474#2      -------------------------------------------TCGAGGCC--AGNATTC 15
consensus_10474#1      CTCTTGAGACTGCTGAAGATCTACAAGTCGGTAATTATGGTTTGGGTGGACATTATGCTC 215
                                                                    *  *           

consensus_10474#0      ACCATTGCAAAT--GACGAAACTGAAGAAAATGGAGAAACTGAACCGACAGTTGGACAAA 838
consensus_10474#2      GGCACGAGGAAT--GACGAAACTGAAGAAAATGGAGAAACTGAACCGACAGTTGGACAAA 73
consensus_10474#1      CACATTTTGATTTTGGTCGAAAAAGAGAAAAGGACGCATTCGAAGTTAAAAATGGGAACA 275
                         **     * *  *    **    ****** *  * *   ***   * *  ***  * *

consensus_10474#0      TTTTAG--ACTATC-TTGCCTATTCTCTTGG---ACGACAAGGAAGATATGCTGAAGC-- 890
consensus_10474#2      TTTTAG--ACTATC-TTGCCTATTCTCTTGNG--ACGACA-GGAAGATATGCTGAAGC-- 125
consensus_10474#1      GGATAGCTACAATTATTTTTTATTTATCTGATGTACAAGCAGGAGGAGCCACTGTATTTA 335
                          ***  ** **  **   ****    **    ** *   *** **    *** *    

consensus_10474#0      ACTGAA-CGTGACACGT-TTGCTAATTGAAGAGGAACCGACGAATACAAGAGCTATCAAT 948
consensus_10474#2      ACTGAA-CGTGACACGT-TTGCTAATTTGAGAGGAC------------------------ 159
consensus_10474#1      ACCGTATCGGTACACGTGTTGTCCCTAAAAAAGGAGCCGCTGGTTTCTGGTTTAATCTTT 395
                       ** * * **  ****** ***    *   * ****                         

consensus_10474#0      AATGAAGCCTACTATGTGGAACAAATAGACAGAGGTGAAGGAAGAATCGGTCCGAATCCT 1008
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      TGCCAAATGGAGAAGGTGACCTACGAACTAGACACGCTGCTTGCCCAGTTCTAGCTGGCT 455
                                                                                   

consensus_10474#0      CGTTCTCAAGCTATATCAAAGCACGATCAAGAGACTGAGCTATACGAATCATTATGTCGT 1068
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      CAAAATGGGTAATGAATCTATGGTTTCATGAACGCGGTCAAGAATTTCGTAGACCATGTG 515
                                                                                   

consensus_10474#0      AATGAAAATCCCTTCCCTACAGTCCCGTCACATCACCTAACATGTCGATATTATACTCCT 1128
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      AATTAGAGCGTGGGACAGTTGAAACAGATGATGACTTTTAAATATAATCCACCTTTATTC 575
                                                                                   

consensus_10474#0      CATGCGTTTTTTAAAATTGGTCCAGTTAAGGAGGAAACTTTAAACCCTGATCCACGTATT 1188
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      TTTCGAAAATTATACATCTACTCAATTATATGTTCAATGTTTTGTTTTATATTCACTCTG 635
                                                                                   

consensus_10474#0      GTAATGTGGTACGATTTGATTTTTCCATCGGAGATTGAAAAAATCAAAGAGCTGGCTACA 1248
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      TTACTGCCAACTAAACTAAGCATTGATGATTTTGTTAAATCACTTTTGAAATGTTTAGTT 695
                                                                                   

consensus_10474#0      CCAAGACTTCGTAGAGCGACGGTTAAAAATCCGGTAACTGGCATCTTGGAGATAGCTTTT 1308
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      TCATTCAAAACAATAAATTAGTACATATAGTGGATACTTCAATGTGTAAAATATAATCA- 754
                                                                                   

consensus_10474#0      TATAGAACCAGTAAAAGCGCTTGGCTTCCGCATTCTATGAGTGAAATTACTGACCAGATA 1368
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      AGTCAGCGTATACGAGCTGTTACAGGTTTGTCTCTTGAGACTGCTGAAGATCTACAAGTC 1428
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      GGTAATTATGGTTTGGGTGGACATTATGCTCCACATTTTGATTTTGGTCGAAAAAGAGAA 1488
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      AAGGACGCATTCGAAGTTAAAAATGGGAACAGGATAGCTACAATTATTTTTTATTTATCT 1548
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      GATGTACAAGCAGGAGGAGCCACTGTATTTAATATCGTACACGTGTTGTCCCTAAAAAGG 1608
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      AGCCGCTGGTTTCTGGTTTAAATCTTTGCAANTGGAGAANGTGACTACGACTANAACGCT 1668
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      GCTTGCCAGTTCTAGCTGGCTCAAATGGGTATGAATCTATGGTNATGAACGCGTCAGATT 1728
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      TCGANACATGTGATANAGCGTGGAACGTGACAGAGAGACTTAANNNTATCACTATCTTCG 1788
consensus_10474#2      ------------------------------------------------------------
consensus_10474#1      ------------------------------------------------------------
                                                                                   

consensus_10474#0      AATT 1792
consensus_10474#2      ----
consensus_10474#1      ----


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)