cluster # 10478

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Schistosoma mansoni
cluster # 10478 cluster # 10478 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10478#0 length = 1441 sequences # 9

consensus_10478#1 length = 1192 sequences # 7
consensus_10478#2 length = 204 sequences # 1

consensusID : consensus_10478#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1441
fasta sequence

                              [AAGAAATAAAAACGCTACAGCAGAAACTATCTGATAATGAACAAACTGTTTGTAAAAATTATAGTAAGATCCGTTCAGTCACGGAAACTTATAAGGAATGTCTTATTGTTCTTATCGGGATTTATAGCTTTGTGTGCTCAGTTATTAAAGTGTCACCACATAAACAAGTGGCTCATGTAGCTGATCGTTTTAATATCCCTCTTTGTGGTGAGAAAGATTCGTCGGAAAATTCAGTCGCATCTGATGTGGTTGGGACAGACAAGTCTATTGATGAACAGCTGGGACAAGATTGCGGAATAAAACCAACAGAATCTTCCACATCTAATACAAAAACAACAACCAGTACTACTACCGAATCTAATTTCGAAGTGTTATCCGAAGAAGCTGATTTACACCTTACCGTTGTCACGCAACTGCGTCATCTAGTTAGCACATTCAATGAAAAATATTCTCAGATTTCAAATCAGGTTCCTGGACGTAGCAGTTTAGACGTTGAAGAAACCCAACAACAAAACTTGCGTTTAAAAAGTCTATTGGAGACAAAACGTGAACAAGTACACGCATTGCGTAATATGCTACGAGCTAATAAAACTACGGCTGAAACCGCTCTAGCAAATTTAAAACAAAAATACGAAAAAGAGAAAATCAATGTCAGTTCAACAATGCAACAGTTACGTAATGAATTGAAAACACTTAAAGAAGATGCTGCAATCTATGCTTCTTTACGCGCAGTATTCGCCCAACGTTATGATGAATACATGACACAATTAGATGAAATGCAGAGGAAACTAAGTGTAGCTGAAGAAGAAAAAAGAACTGCAAATACTTTGTTACGTCTTGCTATTCAGCAGAAATTAGCTGTCACTCAACGACTTGAGGAACTCGAGGTAGATCTTTATCAAAAACAAAACTTTGACATTCGTTCTGGCCAATCTCATCCACCCTATCATACTAGTTCAATTCAACCATCTCCTAATTCCCTTTTATCTAGTCCAAATCACCAACATTCTTATTCTACATCAATTCATAGTCAGCGACATTCAACTCCACAAAGCTTCCCCCCAATTGACCTTTCCACTCATAGGTCATCTACCCTCCCAAATGCTTCTTATTATACCGGTTCAAGTCCACAACATGGAAGTATTTCGTCCAATGGCAGCGGTGCAAGATTATCAGGTCCAGGATCCGATAGAAGCAAAGTAATTAATTTTTATCATAAATCATTAAACATATTGCACTACGAAATAGCATCTTTTGATAGAAGTTTTTTTAAATGGGATACTAAGTAGATTATATTTGTGATCTATAAATAGATTCTAAATCATTTCGTTAATGTTACTGGCAGTGCTCGATACACTGTTTTAAATAGAATCAGATTATCTCATCATTGACGATGTTCGGCGACTCTCTATATTCGATCATCATCGTCTATGAAGGATTG]

[+] EMBL CD088128             [AAGAAATAAAAACGCTACAGCAGAAACTATCTGATAATGAACAAACTGTTTGTAAAAATTATAGTAAGATCCGTTCAGTCACGGAAACTTATAAGGAATGTCTTATTGTTCTTATCGGGATTTATAGCTTTGTGTGCTCAGTTATTAAAGTGTCACCACATAAACAAGTGGCTCATGTAGCTGATCGTTTTAATATCCCTCTTTGTGGTGAGAAAGATTCGTCGGAAAATTCAGTCGCATCTGATGTGGTTGGGACAGACAAGTCTATTGATGAACAGCTGGGACAAGATTGCGGAATAAAACCAACAGAATCTTCCACATCTAATACAAAAACAACAACCAGTACTACTACCGAATCTAATTTCGAAGTGTTATCCGAAGAAGCTGATTTACACCTTACCGTTGTCACGCAACTGCGTCATCTAGTTAGCACATTCAATGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD145471             [                                                                                                                                                                                         CGTTTTAATATCCCTCTTTGTGGTGAGAAAGATTCGTCGGAAAATTCAGTCGCATCTGATGTGGTTGGGACAGACAAGTCTATTGATGAACAGCTGGGACAAGATTGCGGAATAAAACCAACAGAATCTTCCACATCTAATACAAAAACAACAACCAGTACTACTACCGAATCTAATTTCGAAGTGTTATCCGAAGAAGCTGATTTACACCTTACCGTTGTCACGCAACTGCGTCATCTAGTTAGCACATTCAATGAAAAATATTCTCAGATTTCAAATCAGGTTCCTGGACGTAGCAGTTTAGACGTTGAAGAAACCCAACAACAAAACTTGCGTTTAAAAAGTCTATTGGAGACAAAACGTGAACAAGTACACGCATTGCGTAATATGCTACGAGCTAATAAAACTACGGCTGANACCGCTCTAGCAAATTTAAAACCAAAATACGAAAAAGAGAAAATCAATGTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD149584             [                                                                                                                                                                                                                                                                                                     GGAATAAAACCGGGAGAATCTTCCACATCTAATACAAAAACAACAACCAGTACTACTACCGAATCTAATTTCGAAGTGTTATCCGAAGAAGCTGATTTACACCTTACCGTTGTCACGCAACTGCGTCATCTAGTTAGCACGTTCAATGAAAAATATTCTCAGATTTCAAATCAGGTTCCTGGACGTAGCAGTTTAGACGTTGAAGAAACCCAACAACAAAACTTGCGTTTAAAAAGTCTATTGGAGACAAAACGTGAACAAGTACACGCATTGCGTAATATGCTACGAGCTAATAAAACTACGGCTGAAACCGCTCTAGCAAATTTAAAACAAAAATACGAAAAAGAGAAAATCAATGTCAGTTCAACAATGCAACAGTTACGTAATGAATTGAAAACACTTAAAGAAGATGCTGCAATCTATGCTTCTTTAAGCGCAGTATTCGCCCAACGTTATGATGAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD181368             [                                                                                                                                                                                                                                                                                                                                                                                                             TACCGTTGTCACGCAACTGCGTCATCTAGTTAGCACATTCAATGAAAAATATTCTCAGATTTCAAATCAGGTTCCTGGACGTAGCAGTTTAGACGTTGAAGAAACCCAACAACAAAACTTGCGTAGAAAAAGTCTATTGGAGACAAAACGTGAACAAGTACACGCATTGCGTAATACGCTACGAGCTAATAAAACTACGGCTGAAACCGCTCTAGCAAATTTAAAACAAAAATACGAAAAAGGGAAAATCAATGTCAGTTCAACAATGCAACAGTTACGTAATGAATTG AAACACTTAAAG AGATGCTGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD112941             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAAATATTCTCAGATTTCAAATCAGGTTCCTGGACGTAGCAGTTTAGATGTTGAAGAAACCCAACAACAAAACTTGCGTTTAAAAAGTCTATTGGAGACAAAACGTGAACAAGTACACGCATTGCGTAATATGCTTCGAGCTAATAAAACTACGGCTGAAACCGCTCTAGCAAATTTAAAACAAAAATACGAAAAAGAGAAAATCAATGTCAGTTCAACAATGCAACAGCTACGTAATGAATTGAAAACACTTAAAGAAGATGCTGCAATCTATGCTTCTTTACGCGCAGTATTCGCCCAACGTTATGATGAATACATGACACAATTAGATGAAATGCAGAGGAAACTAAGTGTAGCTGAAGAAGAAAAAAGAACTGCAAATACTTTGTTACGTCTTGCTATTCAGCAGAAATTACCTGTCACTCAACGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD089688             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACAAGTACACGCATTGCGTAATATGCTACGAGCTAATAAAACTACGGCTGAAACCGCTCTAGCAAATTTAAAACAAAAATACGAAAAAGAGAAAATCAATGTCAGTTCAACAATGCAACAGTTACGTAATGAATTGAAAACACTTAAAGAAGATGCTGCAATCTATGCTTCTTTACGCGCAGTATTCGCCCAACGTTATGATGAATACATGACACAATTAGATGAAATGCAGAGGAAACTAAGTGTAGCTGAAGAAGAAAAAAGAACTGCAAATACTTTGTTACGTCTTGCTATTCAGCAGAAATTAGCTGTCACTCAACGACTTGAGGAACTCGAGGTAGATCTTTATCAAAAACAAAACTTTGACATTCGTTCTGGCCAATCTCATCCACCCTATCATACTAGTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD089768             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACAAGTACACGCATTGCGTAATATGCTACGAGCTAATAAAACTACGGCTGAAACCGCTCTAGCAAATTTAAAACAAAAATACGAAAAAGAGAAAATCAATGTCAGTTCAACAATGCAACAGTTACGTAATGAATTGAAAACACTTAAAGAAGATGCTGCAATCTATGCTTCTTTACGCGCAGTATTCGCCCAACGTTATGATGAATACATGACACAATTAGATGAAATGCAGAGGAAACTAAGTGTAGCTGAAGAAGAAAAAAGAACTGCAAATACTTTGTTACGTCTTGCTATTCAGCAGAAATTAGCTGTCACTCAACGACTTGAGGAACTCGAGGTAGATCTTTATCAAAAACAAAACTTTGACATTCGTTCTGGCCAATCTCATCCACCCTATCATACTAGTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD092025             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGAAGAAAAAAGAACTGCAAATACTTTGTTACGTCTTGCTATTCAGCAGAAATTAGCTGTCACTCAACGACTTGAGGAACTCGAGGTAGATCTTTATCAAAAACAAAACTTTGACATTCGTTCTGGCCAATCTCATCCACCCTATCATGCTAGTTCAATTCAACCATCTCCTAATTCCCTTTTATCTAGTCCAAATCACCAACATTCTTATTCTACATCAATTCATAGTCAGCGACATTCAACTCCACAAAGCTTCCCCCCAATTGACCTTTCCACTCATAGGTCATCTACCCTCCCAAATGCTTCTTATTATACCGGTTCAAGTCCACAACATGGAAGTATTTCGTCCAATGGCAGCGGTGCAA                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD124146             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACCTTTCCACTCTTAGGTCATCTACCCTTCCAAATGCTTCTTATTATACCGGTTCAAGTCCACAACATGGAAGTATTTCGTCCAATGGCAGTGGTGCAAGATTATCAGGTCCAGGATCCGATAGAAGCAAAGTAATTAATTTTTATCATAAATCATTAAACATATTGCACTACGAAATAGCATCTTTTGATAGAAGTTTTTTTAAATGGGATACTAAGTAGATTATATTTGTGATCTATAAATAGATTCTAAATCATTTCGTTAATGTTACTGGCAGTGCTCGATACACTGTTTTAAATAGAATCAGATTATCTCATCATTGACGATGTTCGGCGACTCTCTATATTCGATCATCATCGTCTATGAAGGATTG]




>consensus_10478#0
AAGAAATAAAAACGCTACAGCAGAAACTATCTGATAATGAACAAACTGTTTGTAAAAATT
ATAGTAAGATCCGTTCAGTCACGGAAACTTATAAGGAATGTCTTATTGTTCTTATCGGGA
TTTATAGCTTTGTGTGCTCAGTTATTAAAGTGTCACCACATAAACAAGTGGCTCATGTAG
CTGATCGTTTTAATATCCCTCTTTGTGGTGAGAAAGATTCGTCGGAAAATTCAGTCGCAT
CTGATGTGGTTGGGACAGACAAGTCTATTGATGAACAGCTGGGACAAGATTGCGGAATAA
AACCAACAGAATCTTCCACATCTAATACAAAAACAACAACCAGTACTACTACCGAATCTA
ATTTCGAAGTGTTATCCGAAGAAGCTGATTTACACCTTACCGTTGTCACGCAACTGCGTC
ATCTAGTTAGCACATTCAATGAAAAATATTCTCAGATTTCAAATCAGGTTCCTGGACGTA
GCAGTTTAGACGTTGAAGAAACCCAACAACAAAACTTGCGTTTAAAAAGTCTATTGGAGA
CAAAACGTGAACAAGTACACGCATTGCGTAATATGCTACGAGCTAATAAAACTACGGCTG
AAACCGCTCTAGCAAATTTAAAACAAAAATACGAAAAAGAGAAAATCAATGTCAGTTCAA
CAATGCAACAGTTACGTAATGAATTGAAAACACTTAAAGAAGATGCTGCAATCTATGCTT
CTTTACGCGCAGTATTCGCCCAACGTTATGATGAATACATGACACAATTAGATGAAATGC
AGAGGAAACTAAGTGTAGCTGAAGAAGAAAAAAGAACTGCAAATACTTTGTTACGTCTTG
CTATTCAGCAGAAATTAGCTGTCACTCAACGACTTGAGGAACTCGAGGTAGATCTTTATC
AAAAACAAAACTTTGACATTCGTTCTGGCCAATCTCATCCACCCTATCATACTAGTTCAA
TTCAACCATCTCCTAATTCCCTTTTATCTAGTCCAAATCACCAACATTCTTATTCTACAT
CAATTCATAGTCAGCGACATTCAACTCCACAAAGCTTCCCCCCAATTGACCTTTCCACTC
ATAGGTCATCTACCCTCCCAAATGCTTCTTATTATACCGGTTCAAGTCCACAACATGGAA
GTATTTCGTCCAATGGCAGCGGTGCAAGATTATCAGGTCCAGGATCCGATAGAAGCAAAG
TAATTAATTTTTATCATAAATCATTAAACATATTGCACTACGAAATAGCATCTTTTGATA
GAAGTTTTTTTAAATGGGATACTAAGTAGATTATATTTGTGATCTATAAATAGATTCTAA
ATCATTTCGTTAATGTTACTGGCAGTGCTCGATACACTGTTTTAAATAGAATCAGATTAT
CTCATCATTGACGATGTTCGGCGACTCTCTATATTCGATCATCATCGTCTATGAAGGATT
G

consensusID : consensus_10478#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1192
fasta sequence

                              [TCGAGGCCAAGAATCGGCACGAGGCACAAAGCTTCCCCC-CAATTGACCTTTCCACTCTTAGGTCATCTACCCTTCCAAATGCTTCTTATTATACCGGTTCAAGTCCACAACATGGAAGTATTTCGTCCAATGGCAGTGGTGCAAGATTATCAGGTCCAGGATCCGATAGAAGCAAAAGAAATACGCGTTTCAGACGTGATGGTGTGACCTGAACACATTGTCTATCCAGTCGTATATTATATATATGGTTTTTAACACTTCCAGCTTTGTTTACATTCGGAAAAAAACTCAT-TGCCTTCAACCTGTTTTTTTCCAT-TTAGGTTATCATCGGATATTTTTTACATCTCATTATGCATATGCTTGTATAATATGTTTTAAACAGTCTGTGCTCGTTTATTGTAATTATTTAGAGCTCAATGTTCTTGCTTGTTCACACAACTTAGTTAACCATATGTTGTGAATTTGGCGAGAAATTTTAATCTTCTTACTAGTATGACAAATTGTTTATTATGTGCAATATAAATTCTCTTCTTTTTCGATCTATCTATCTAAAGTATACGTTNTAATTGTAAGCAGTTAGGGGATTGTGTATTTCTGCTCCTTTATTAAACGTTAATTCATATCTTTGGACATTGTCATAGGATATTTATATACATCTCTCTTAGCAACATCTGTTTACTGAAAAATATCAAGTTTGATCTCTTAAATGAATTTCATGTTGATCTGAATGTTTTTTGTTTTTAATTATTATCCATCTGTTTATCATATCAAATGTTGCAATATCTTA-TTTGTTTTTAGTACGATAAAAAACTTACGTAAAT-ATCAGTTGCTTGTTTTTCCTAAGTTCTTCAC-TTTCGTTTTGTTTTACCTAATTCTATTTCTGCTTTCCCATATGTATAAAAACACTAAACTGTACAATGACATTTTCTTTCCTTCCTGTTTTTCTTCATGTTAGTCCTTTTAATTTACTCATGGCGTTCAAATAGAATGCTTCATAGAAAGTTTGGATTTTTCTTTTGACAAAAAATGTTTTTCTTTTATCTTTGTTCGCAGTGTATGATGCTAAAAAGTAATAATTTGTTCGTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTGCCGTAGCGTGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG]

[+] EMBL CD083986             [TCGAGGCCAAGAATCGGCACGAGGCACAAAGCTTCCCCC CAATTGACCTTTCCACTCTTAGGTCATCTACCCTTCCAAATGCTTCTTATTATACCGGTTCAAGTCCACAACATGGAAGTATTTCGTCCAATGGCAGCGGTGCAAGATTATCAGGTCCAGGATCCGATAGAAGCAAAAGAAATACGCGTTTCAGACGTGATGGTGTGACCTGAACACATTGTCTATCCAGTCGTATATTATATATATGGTTTTTAACACTTCCAGCTTTGTTTACATTCGGAAAAAAACTCAT TGCCTTCAACCTGTTTTTTTCCAT TTAGGTTATCATCGGATATTTTTTACATCTCATTATGCATATGCTTGTATAATATGTTTTAAACAGTCTGTGCTCGTTTATTGTAATTATTTAGAGCTCAATGTTCTTGCTTGTTCACACAACTTAGTTAACCATATGTTGTGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD083754             [                               CTACCCCCGCGAGTGACCTTTCCACTCTTAGGTCATCTACCCTTCCAAATGCTTCTTATTATACCGGTTCAAGTCCACAACATGGAAGTATTTCGTCCAATGGCAGTGGTGCAAGATTATCAGGTCCAGGATCCGATAGAAGCAAAAGAAATACGCGTTTCAGACGTGATGGTGTGACCTGAACACATTGTCTATCCAGTCGTATATCATATATATGGTTTTTAACACTTCCAGCTTTGTTTACATTCGGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD113356             [                                                                              AATGCTTCTTATTAGACCGGTTCAAGTCCACAACATGGAAGTATTTCGTCCAATGGCAGTGGTGCAAGATTATCAGGTCCAGGATCCGATAGAAGCAAAAGAAATACGCGTCTCAGACGTGATGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD202136             [                                                                                                                                         TGGTGCAAGATTATCAGGTCCAGGATCCGATATAAGCAAAAGAAATACGCGTTTCAGACGTGATGGTGTGACCTGAACACATTGTCTATCCAGTCGTATGTTATATATATGGTTTTTAACACTTCCAGCTTTGTTTACATTCGGAAAAAAACTCAT TGCCTTCAACCTGTTTTTTTCCAT TTAGGTTATCATCGGATATTTTTTACATCTCATTATGCATATGCTTGTATAATATGTTTTAAACAGTCTGTGCTCGTTTATTGTAATTATTTAGAGCTCAATGTTCTTGCTTGTTCACACAACTTAGTTAACCATATGTTGTGAATTTGGCGAGAAATTTTAATCTTCTTACTAGTATGACAAATTGTTTATTATGTGCAATATAAATTCTCTTCTTTTTCGATCTATCTATCTAAAGTATACGTTNTAATTGTAAGCAGTTAGGGGATTGTGTATTTCTGCTCCTTTATTAAACGTTAATTCATATCTTTGGACATTGTCATAGGATATTTATATACATCTCTCTTAGC ACATCTGTTTACTGAAAAATATCAAGTTTGATCTCTTAAATGAATNTCATGTTGATCTGAATGTTTTTGGTTTTTAA TATTATCCATCTGGTTATTATATCAAATGGTGCAATATCTTATTTTGTTTTTAGTACGATAAAANACTTACGTAAATAATCAGTGGCTTGTTTTTCCTAAG TCCTCACTTTTCGTTTTG TTTACCTAATT                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD202068             [                                                                                                                                                                                                                                                                                               ACTCATGCCCCTTCAACCTG  TTTTTCCATNNTAGGTTATCATCGGATATTTTTTACATCTCATTATGCATATGCTTGTATAATATGTTTTAAACAGTCTGTGCTCGTTTATTGTAATTATTTAGAGCTCAATGTTCTTGCTTGTTCACACAACTTAGTTAACCATATGTTGTGAATTTGGCGAGAAATTTTAATCTTCTTACTAGTATGACAAATTGTTTATTATGTGCAATATAAATTCTCTTCTTTTTCGATCTATCTATCTAAAGTATACGTTTTAATTGTAAGCAGTTAGGGGATTGTGTATTTCTGCTCCTTTATTAAACGTTAATTCATATCTTTGGACATTGTCGTAGGATATTTATATACATCTCTCTTAGCAACATCTGTTTACTGAAAAATATCAAGTTTGATCTCTTAAATGAATTTCATGTTGATCTGAATGTTTTTTGTTTTTAATTATTATCCATCTGTTTATCATATCAAATGTTGCAATATCTTA TTTGTTTTTAGTACGATAAAAAACTTACGTAAAT ATCAGTTGCTTGTTTTTCCTAAGTTCTTCAC TTTCGTTTTGTTTTACCTAA                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD137238             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTCTCTTAGCAACATCTGTTTACTGAAAAATATCAAGTTTGATCTCTTAAATGAATTTCATGTTGATCTGAATGTTTTTTGTTTTTAATTATTATCCATCTGTTTATCATATCAAATGTTGCAATATCTTA TTTGTTTTTAGTACGATAAAAAACTTACGTAAAT ATCAGTTGCTTGTTTTTCCTAAGTTCTTCAC TTTCGTTTTGTTTTACCTAATTCTATTTCTGCTTTCCCATATGTATAAAAACACTAAACTGTACAATGACATTTTCTTTCCTTCCTGTTTTTCTTCATGTTAGTCCTTTTAATTTACTCATGGCGTTCAAATAGAATGCTTCATAGAAAGTTTGGATTTTTCTTTTGACAAAAAATGTTTTTCTTTTATCTTT                                                                                                                                                   ]
[-] EMBL BF936123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTTTATCAAACCAAATGTTGCAATATTTTA TTTGTTTTTAGTACGATAAAAAACTTACGTAAAT ACCAGTTGCTTGTTTTTCCTAAGTTTTTCAC TTTCGTTTTGTTTCACCTAATTCTATTTCTGCTTTCCCATATGTATAAAAACACTAAACTGGACAAGGACATTTTCTTTCCTTCCTGTTTTTTTTCATGTTAGTCCTTTTAATTTACTCATGGCGTTCAAATAGAATGCTTCATAGAAAGTTTGGATTTTTTTTTTGACAAAAAATGTTTTTCTTTTATCTTTGTTCGCAGTGTATGATGCTAAAAAGTAATAATTTGTTCGTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTGCCGTAGCGTGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG]




>consensus_10478#1
TCGAGGCCAAGAATCGGCACGAGGCACAAAGCTTCCCCCCAATTGACCTTTCCACTCTTA
GGTCATCTACCCTTCCAAATGCTTCTTATTATACCGGTTCAAGTCCACAACATGGAAGTA
TTTCGTCCAATGGCAGTGGTGCAAGATTATCAGGTCCAGGATCCGATAGAAGCAAAAGAA
ATACGCGTTTCAGACGTGATGGTGTGACCTGAACACATTGTCTATCCAGTCGTATATTAT
ATATATGGTTTTTAACACTTCCAGCTTTGTTTACATTCGGAAAAAAACTCATTGCCTTCA
ACCTGTTTTTTTCCATTTAGGTTATCATCGGATATTTTTTACATCTCATTATGCATATGC
TTGTATAATATGTTTTAAACAGTCTGTGCTCGTTTATTGTAATTATTTAGAGCTCAATGT
TCTTGCTTGTTCACACAACTTAGTTAACCATATGTTGTGAATTTGGCGAGAAATTTTAAT
CTTCTTACTAGTATGACAAATTGTTTATTATGTGCAATATAAATTCTCTTCTTTTTCGAT
CTATCTATCTAAAGTATACGTTNTAATTGTAAGCAGTTAGGGGATTGTGTATTTCTGCTC
CTTTATTAAACGTTAATTCATATCTTTGGACATTGTCATAGGATATTTATATACATCTCT
CTTAGCAACATCTGTTTACTGAAAAATATCAAGTTTGATCTCTTAAATGAATTTCATGTT
GATCTGAATGTTTTTTGTTTTTAATTATTATCCATCTGTTTATCATATCAAATGTTGCAA
TATCTTATTTGTTTTTAGTACGATAAAAAACTTACGTAAATATCAGTTGCTTGTTTTTCC
TAAGTTCTTCACTTTCGTTTTGTTTTACCTAATTCTATTTCTGCTTTCCCATATGTATAA
AAACACTAAACTGTACAATGACATTTTCTTTCCTTCCTGTTTTTCTTCATGTTAGTCCTT
TTAATTTACTCATGGCGTTCAAATAGAATGCTTCATAGAAAGTTTGGATTTTTCTTTTGA
CAAAAAATGTTTTTCTTTTATCTTTGTTCGCAGTGTATGATGCTAAAAAGTAATAATTTG
TTCGTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCAT
TGCCGTAGCGTGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG

consensusID : consensus_10478#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 204
fasta sequence

                              [TGAAGAAACCCAACAACAAAACTTGGGTTTAAAAAGTTTATTGGAGACAAAACGTGAACAAGTACACGCATTGGGTAATATGTTACGAGCTAATAAAACTACGGCTGAAACCGCTTTAGCAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTA]

[-] EMBL BF936907             [TGAAGAAACCCAACAACAAAACTTGGGTTTAAAAAGTTTATTGGAGACAAAACGTGAACAAGTACACGCATTGGGTAATATGTTACGAGCTAATAAAACTACGGCTGAAACCGCTTTAGCAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTA]




>consensus_10478#2
TGAAGAAACCCAACAACAAAACTTGGGTTTAAAAAGTTTATTGGAGACAAAACGTGAACA
AGTACACGCATTGGGTAATATGTTACGAGCTAATAAAACTACGGCTGAAACCGCTTTAGC
AAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC
ATGCCATGCAGCTGCATTACCGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10478#0      AAGAAATAAAAACGCTACAGCAGAAACTATCTGATAATGAACAAACTGTTTGTAAAAATT 60
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      ------------------------------------------------------------
                                                                                   

consensus_10478#0      ATAGTAAGATCCGTTCAGTCACGGAAACTTATAAGGAATGTCTTATTGTTCTTATCGGGA 120
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      ------------------------------------------------------------
                                                                                   

consensus_10478#0      TTTATAGCTTTGTGTGCTCAGTTATTAAAGTGTCACCACATAAACAAGTGGCTCATGTAG 180
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      -TCGAGGCCAAGAATCGGCACGAGGCACAAAGCTTCCCCCCAA-----TTGACCTTTCCA 54
                                                                                   

consensus_10478#0      CTGATCGTTTTAATATCCCTCTTTGTGGTGAGAAAGATTCGTCGGAAAATTCAGTCGCAT 240
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      CTCTTAGGTCATCTACCCTTCCAAATGCTTCTTATTATACCGGTTCAAGTCCA--CAACA 112
                                                                                   

consensus_10478#0      CTGATGTGGTTGGGACAGACAAGTCTATTGATGAACAGCTGGGACAAGATT--GCGGAAT 298
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      TGGAAGTATTTCGTCCAATGGCAGTGGTGCAAGATTATCAGGTCCAGGATCCGATAGAAG 172
                                                                                   

consensus_10478#0      AAAACCAACAGAATCTTCCACATCTAATACAAAAACAACAACCAGTACTACTACCGAATC 358
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      CAAAAGAAATACGCGTTTCAGACGTGATGGTGTGACCTGAACACATTGTCTATCCAGTCG 232
                                                                                   

consensus_10478#0      TAATTTCGAAGTGTTATCCGAAGAAGCTGATTTACACCTTACCGTTGTCACGCAACTG-- 416
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      TATATTATATATATGGTTTTTAACACTTCCAGCTTTGTTTACATTCGGAAAAAAACTCAT 292
                                                                                   

consensus_10478#0      CGTCATCTAGTTAGCACATTCAATGAAAAATATTCTCAGATTTCAAATCAGGTTCCTGGA 476
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      TGCCTTCAACCTGTTTTTTTCCATTTAGGTTATCATCGGATATTTT-TTACATCTCATTA 351
                                                                                   

consensus_10478#0      CGTAGCAGTTTAGACGTTGAAGAAACCCAACAACAAAACTTGCGTTTAAAAAGTCTATTG 536
consensus_10478#2      -----------------TGAAGAAACCCAACAACAAAACTTGGGTTTAAAAAGTTTATTG 43
consensus_10478#1      TGCATATGCTTGTA---TAATATGTTTTAAACAGTCTGTGCTCGTTTATTGTAATTATTT 408
                                        * *        **  *          *****       **** 

consensus_10478#0      GAGACAAAACGTGAACAAGTACACGCATTGCGTAATATGCTACGAGCTAATAAAACTACG 596
consensus_10478#2      GAGACAAAACGTGAACAAGTACACGCATTGGGTAATATGTTACGAGCTAATAAAACTACG 103
consensus_10478#1      AGAGCTCAATGTTCTTGCTTGTTCACACAACTTAGTTAACCATATGTTGTGAATTTGGCG 468
                           *  ** **       *   * **     ** *     *   * *   **     **

consensus_10478#0      GCTGAAACCGCTCTAGCAAATT-TAAAACAAAAATACGAAAAAGAGAAAATCAATGTCAG 655
consensus_10478#2      GCTGAAACCGCTTTAGCAAATT-TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 162
consensus_10478#1      AGAAATTTTAATCTTCTTACTAGTATGACAAATTGTTTATTATGTGCAATATAAATTCTC 528
                           *      * *    * *  **  * ***      *  *     **   **      

consensus_10478#0      TTCAACAATGCAACAGTTACGTAATGAATTGAAAACA-CTTAAAGAAGATGCTGCAATCT 714
consensus_10478#2      AAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTA-CCGTA----------------- 204
consensus_10478#1      TTCTTTTTCGATCTATCTATCTAAAGTATACGTTNTAATTGTAAGCAGTTAGGGGATTGT 588
                                     *   *    * * *        *     *                 

consensus_10478#0      ATGCTTCTTTACGCGCAGTATTCGCCCAACGTTATGATGAATACATGACACAATTAGATG 774
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      GTATTTCTGCTCCTTTATTAAACGTTAATTCATATCTTTGGACATTGTCATAGGATATTT 648
                                                                                   

consensus_10478#0      AAATGCAGAGGAAACTAAGTGTAGCTGAAGAAGAAAAAAGAACTGCAAATACTTTGTTAC 834
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      ATATACATCTCTC-TTAGCAACATCTGTTTACTGAAAAATATCAAGTTTGATCTCTTAAA 707
                                                                                   

consensus_10478#0      GTCTTGCTATTCAGCAGAAATTAGCTGTCACTCAACGACTTGAGGAACTCGAGGTAGATC 894
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      TGAATTTCATGTTGATCTGAATGTTTTTTGTTTTTAATTATTATCCATCTGTTTATCATA 767
                                                                                   

consensus_10478#0      TTTATCAAAAACAAAACTTTGACATTCGTTCTGGCCAATCTCATCCACCCTATCATACTA 954
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      TCAAATGTTGCAATATCTT--ATTTGTTTTTAGTACGATAAAAAACTTACGTAAATATCA 825
                                                                                   

consensus_10478#0      GTTCAATTCAACCATCTCCTAATTCCCTTTTATCTAGTCCAAATCACCAACATTCTTATT 1014
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      GTTGCTTGTTTTTCCTAAGTTCTTCACTTTCGTTTTGTTTTACCTAATTCTATTTCTGCT 885
                                                                                   

consensus_10478#0      CTACATCAATTCATAGTCAGCGACATTCAACTCCACAAAGCTTCCCCCCAATTGACCTTT 1074
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      TTCCCATATGTATAAAAACACTAAACTGTACAATGACATTTTCTTTCCTTCCTGTTTTTC 945
                                                                                   

consensus_10478#0      CCACTCATAGGTCATCTACCCTCCCAAATGCTTCTTATTATACCGGTTCAAGTCCACAAC 1134
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      TTCATGTTAGTCCTTTTAATTTACTCATGGCGTTCAAATAGAATGCTTCATAGAAAGTTT 1005
                                                                                   

consensus_10478#0      ATGGAAGTATTTCGTCCAATGGCAGCGGTGCAAGATTATCAGGTCCAGGATCCGATAGAA 1194
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      GGATTTTTCTTTTGACAAAAAATGTTTTTCTTTTATCTTTGTTCGCAGTGTATGATGCTA 1065
                                                                                   

consensus_10478#0      GCAAAGTAATTAATTTTTATCATAAATCATTAAACATATTGCACTACGAAATAGCATCTT 1254
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      AAAAGTAATAATTTGTTCGTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAT 1125
                                                                                   

consensus_10478#0      TTGATAGAAGTTTTTTTAAATGGGATACTAAGTAGATTATATTTGTGATCTATAAATAGA 1314
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      GCCATGCAGCTGCATTGCCGTAGCGTGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 1185
                                                                                   

consensus_10478#0      TTCTAAATCATTTCGTTAATGTTACTGGCAGTGCTCGATACACTGTTTTAAATAGAATCA 1374
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      GAGAGAG----------------------------------------------------- 1192
                                                                                   

consensus_10478#0      GATTATCTCATCATTGACGATGTTCGGCGACTCTCTATATTCGATCATCATCGTCTATGA 1434
consensus_10478#2      ------------------------------------------------------------
consensus_10478#1      ------------------------------------------------------------
                                                                                   

consensus_10478#0      AGGATTG 1441
consensus_10478#2      -------
consensus_10478#1      -------