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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10481#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1121 fasta sequence
[AATGACAGATAGATACGTTGAAATATAATGATCGATCTTATGTAAGTGTCAAAGAGTTCAAAAATTCAGAATTTATCATGGGTCAACATTCATGTGAATCTTTTACAGAACATTGTTAAGTTAGCACTGGATCAGAACTATCAGAGTTTGATGTGGATTCGAATTTATTCACCATATTTTCCAGAGGTTTGTTGTTAAGAGTTTGTGTTATTTTTTCAGAGGAAAATTCACGTGGTAAAGTCCATACTTTTTTTGGTATTTGTAAATGACCTTGGTCAATTTCAGTTCCCAAAAGCTTCGATGTCAACTTCCGAGGCAAAGTATTTATCTTTCCATTTTTTTAGAGAAGACATCACAACAATAATTGCGTTTCAGCCTTGGGAAAGCTACCCTTAACCCGGACATCAATGGAGAGTGTAGTACAACAGCTGCAACTCGATGAAGAGTAGCCAGATGTATTGTCGGTACAGTCCCAATGCTCTGGCCGTACAAAACAATTTGGTTTAAAGGGACAGAATACTTCGTCCTTAAAACATTTAGTGCACACTCAGCATCAGCATAAAGGTTTTTTTCCAATGGCTTTCCAGAAGATGCTCCATAGCCTGAATAATCGTAACACATGATGTTAACGTTTAACTTGCTACCCAGTTCATACATGAAGTGAAGCATCAGACCCAAGTCCACGGCATTTCCATGGCTTAACAAGAATGTTAGCTTAGATGACGAATTGATAGGCATATAAAGAATCGCGATATTATTCCCCCTTCTAGTTGTAGCCTTCATTGACTCCATGTTTTCCGGGACAAAATGGATAAATGAATCTTTCAAGTATGAAGCCAGAGTAAAGCGGTATGTAGTATGTCCTCCTTCAGTATGTTCTGTCAGTTTATAACTGGAAGGCGGAGGCATAAATGCCAACTTAGCTGCAATTTTGGATGGTAATGGAGGACAACACAATAGTTGACAAATACTGTTGCAGCTTAAATCATTCATCAGTCTGCAATAATGTTGCAAACAAAGCTTTCACTGGGAAACGAAGATGTGCCAAAAGAGCCTTGCGTTCAGTGGTTTTTTCAACATCATTGTCATGAGGAGGAGTTCATAGTTAAATAGAATGATAT]
[+] EMBL CD062393 [AATGACAGATAGATACGTTGAAATATAATGATCGATCTTATGTAAGTGTCAAAGAGTTCAAAAATTCAGAATTTATCATGGGTCAACATTCATGTGAATCTTTTACAGAACATTGTTAAGTTAGCACTGGATCAGAACTATCAGAGTTTGATGTGGATTCGAATTTATTCACCATATTTTCCAGAGGTTTGTTGTTAAGAGTTTGTGTTATTTTTTCAGAGGAAAATTCACGTGGTAAAGTCCATACTTTTTTTGGTATTTGTAAATGACCTTGGTCAATTTCAGTTCCCAAAAGCTTCGATGTCAACTTCCGAGGCAAAGTATTTATCTTTCCATTTTTTTAGAGAAGACATCACAACAATAATTGCGTTTCAGCCTTGGGAAAGCTACCCTTAACCCGGACATCAATGGAGAGTGTAGTACAACAGCTGCAACTCGATGAAGAGTAGCCAGATGTATTGTCGGTACAGTCCCAATGCTCTGGCCGTACAAAACAATTTGGTTTAAAGGGACCGAATACTTCGTCCTT ]
[-] EMBL SM58060 [ ttACCCGGACATCAATGGAGAGTGTAGTACAACAGCTGCAACRCGATGAAGAGTAGCCAGATGTATTGTCGGTACAGTCCCAATGCTCTGGCCGTACAAAACAATTTGGTTTAAAGGGACAGAATKC TCGTCCRTAAAACATTTAGTGCACACTCAGCATCAGCATAAAGGTTTTTTTCCAATGGCTTTCCAGAAGATGCTCCATAGCCTGAATAATCGTAACACATGATGTTAACGTTTAACTTGCTACCCAGTTCATACATGAAGTGAAGCATCAGACCCAAGTCCACGGCATTTCCAT GCTTAACAAGAATGTTAGCTTAGATGACGAATTGATAGGCATATAAAGAATCGCGATATTATTCCCCCTTCTAGTTGT ]
[-] EMBL CD192696 [ GTAGTACAACAGCTGCAACTCGATGAAGAGTAGCCAGATGTATTGTCGGTACAGCCCCAATGCTCTGGCCGTACAAAACAATTTGGTTTAAAGGGACAGAATACTTCGTCCTTAAAACATTTAGTGCACACTCAGCATCAGCATAAAGGTTTTTTTCCAATGGCTTTCCAGAAGATGCTCCATAGCCTGAATAATCGTAACACATGATGTTAACGTTTAACTTGCTACCCAGTTCATACATGAAGTGAAGCATCAGACCCAAGTCCACGGCATTTCCATGGCTTAACAAGAATGTTAGCTTAGATGACGAATTGATAGGCATATAAAGAATCGCGATATTATTC ]
[-] EMBL AI975703 [ GCCTGAATAATCGTAACACATGATGTTAACGTTTAACTTGCTACCCAGTTCATACATGAAGTGAAGCATCAGACCCAAGTCCNCGGCATTTCCATGGCTTAACAAGAATGTTAGCTTAGATGACGAATTGATAGGCATATAGAGAATCGCGATATTATTCCCCCTTCTAGTTGTAGCCTTCATTGACTCCATGTTTTCCGGGACAAAATGGATAAATGAATCTTTCAAGTATGAAGCCAGAGTAAAGCGGTATGTAGTATGTCCTCCTTCAGTATGTTCTGTCAGTTTATAACTGGAAGGCGGAGGCATAAATGCCAACTTAGCTGCAATTTTGGATGGTAATGGAGGACAACACAATAGTTGACAAATACTGTTGCAGCTTAAATCATTCATCAGTCTGCAATAATGTTGCAAACAAAGCTTTCACTGGGAAACGAAGATGTGCCAAAAGAGCCTTGCGTTCAGTGGTTTTTTCAACATCATTGTCATGAGGAGGAGTTCATAGTTAAATAGAATGATAT]
consensusID : consensus_10481#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1054 fasta sequence
[TTCGAATTTATTCACCATATTTTCCAGAGGTTTGTTGTTAAGAGTTTGTGTTATTTTTTTCAGAGGAAAATTCACGTGGTAAAGTCCATACTTTTTTTTGGTATTTGTAAATGACCTTGGTCAATTTCAGTTCCCAAAAGCTTCGATGTCAACTTCCGAGGCAAAGTATTTATCTTTCCATTTTTCTGAGTATGTAAAGACCACAATAATTCAGACGATTGGAAAAAATCCGAATCACCGTTTGTAGGTGGCGGAGGAGGTGGAGGAAGAGTAAGGTTACAAATGTCAGATGGAAGTGAATGCAAATCATCAAGTGAAATGCTAGACAGACAATCAGTTGTAACTACTGAAAACTGGGAAACAACAGCTTCATTCTGATCCATGCACTTTTCCACAGCAATCTGGCTTCCTACTTGTACATCAGAATCGTTATGGTGTCTACTAACACCAATCAGACAGGTACTAGGATCATCAACGGACTTAAAGCACTTTTGTGATGATAACGATGGAGTTGGGCTGGTTCGTTGAGGAGAATGAATGATTTCATCAGGAGGTATCTGTTCGCAAACGTTACTTACACTGAGCCTGCTAGACATTGAGTCCGAAGTAAGGTTCCAAGAAGGACGTGAGAAAAAAAGCTTTGTTGATTTATCTTCCTCTCCCCCTACTGTATTGCCATTCATGCTAAAATACCCATGAGAATTTAGTGAAACCGGTACAGAGTTCGAACTAGATAAATCTGACTGACTATCCTCTTTAACTGTCGCTTTATCCAGTAGTCTAGACGACTCTACTTCCGTATCTCCTACTTCAGAAACATTTTGTGAACAATTAGAATTCAACAGTAATCGAGGTAATTCCACAGTAACCAACTTAGTTAGGCGCAAAAGACACTGAGGGAAAAGTTCGCAGTCATTGTGTCCGGCTCCATCAATGAAAAGAGGATCCAACAATAGATTACCTGCTACAGCAGAACATATACGGTAACCGTGAGTAACGTTCACAACCTCATCACGTGTCCCATGAATCACTAATGTAGGTGAGATAATTTTCG]
[-] EMBL CD194928 [TTCGAATTTATTCACCATATTTTCCAGAGGTTTGTTGTTAAGAGTTTGTGTTATTTTTTTCAGAGGAAAATTCACGTGGTAAAGTCCATACTTTTTTTTGGTATTTGTAAATGACCTTGGTCAATTTCAGTTCCCAAAAGCTTCGATGTCAACTTCCGAGGCAAAGTATTTATCTTTCCATTTTTCTGAGTATGTAAAGACCACAATAATTCAGACGATTGGAAAAAATCCGAATCACCGTTTGTAGGTGGCGGAGGAGGTGGAGGAAGAGTAAGGTTACAAATGTCAGATGGAAGTGAATGCAAATCATCAAGTGAAATGCTAGACAGACAATCAGTTGTAACTACTGAAAACTGGGAAAC ]
[-] EMBL CD195107 [ GGTGNCGGAGNAGGTGGAGNAAGAGTAAGGTTACAAATGTCAGATGGAAGTGAATGCAAATCATCAAGTGAAATGCTAGACAGACAATCAGTTGTAACTACTGAAAACTGGGAAACAACAGCTTCATTCTGATCCATGCACTTTTCCACAGCAATCTGGCTTCCTACTTGTACATCAGAATCGTTATGGTGTCTACTAACACCAATCAGACAGGTACTAGGATCATCAACGGACTTAAAGCACTTTTGTGATGATAACGATGGAGTTGGGCTGGTTCGTTGAGGAGAATGAATGATTTCATCAGGAGGTATCTGTTCGCAAACGTTACTTACACTGAGCCTGCTAGACATTGAGTCCGAAGTAAGGTTCCAAGAAGGACGTGAGAAAAAAAGCTTTGTTGATTTATCTTCCTCTCCCCCTACTGTATTGCCATTCATGCTAAAATACCCATGAGAATTTAGTGAAACCGGTAC ]
[+] EMBL CD182369 [ GGTTACAAATGTCAGATGGAAGTGAATGCAAATCATCAAGTGAAATGCTAGACAGACAATCAGTTGTAACTACTGAAAACTGGGAAACAACAGCTTCATTCTGATCCATGCACTTTTCCACAGCAATCTGGCTTCCTACTTGTACATCAGAATCGTTATGGTGTCTACTAACACCAATCAGACAGGTACTAGGATCATCAACGGACTTAAAGCACTTTTGTGATGATAACGATGGAGTTGGGCTGGTTCGTTGAGGAGAATGAATGATTTCATCAGGAGGTATCTGTTCGC AACGTTACTTACACTGAGCCTGCTAGACATTGAGTCCGAAGTAAGGTTCC AGAAGGACGTGAGAAAAAAAGCTTTTGTGA ]
[-] EMBL CD190599 [ CAGAATCGTTATGGTGTCTACTAACACCAATCAGACAGGTACTAGGATCATCAACGGACTTAAAGCACTTTTGTGATGATAACGATGAAGTTGGGCTGGTTCGTTGAGGAGAATGAATGA TTCATCAGGAGGTATCTGTTCGCAAACGTTACTTACACTGAGCCTGCTAGACATTGAGTCCGAAGTAAGGTTCCAAGAAGGACGTGAGAAAAAAAGCTTTGTTGATTTATCTTCCTCTCCTCCTACTGTATTGCCATTCATGCTAAAATACCCATGAGAATTTAGTGAAACCGGTACAGAGTTCGAACTAGATAAATCTGACTGACTATCCTCTTTAACTGTCGCTTTATCCAGTAGTCTAGACGACTCTACTTCCGTATCTCCTACTTCAGAAACATTTTGTGAACAATTAGAATTCAACAGTAATCGAGGTAATTCCACAGTAACCAACTTAGTTAGGCGCAAAAGACACTGAGGGAAAAGTTCGCAGTCATTGTGTCCGGCTCCATCAATGAAAAGAGGATCCAACAATAGATTACCTGCTACAGCAGAACATAT ]
[-] EMBL CD124802 [ GTCGCTTTATCCAGTAGTCTAGACGACTCTACTTCCGTATCTCCTACTTCAGAAACATTTTGTGAACAATTAGAATTCAACAGTAATCGAGGTAATTCCACAGTAACCAACTTAGTTAGGCGCAAAAGATACTGAGGGAAAAGTTCGCAGTCATTGTGTCCGGCTCCATCAATGAAAAGAGGATCCAACAATAGATTACCTGCTACAGCAGAACATATACGGTAACCGTGAGTAACGTTCACAACCTCATCACGTGTCCCATGAATCACTAATGTAGGTGAGATAATTTTCG]
consensusID : consensus_10481#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 879 fasta sequence
[CGGAGCCATTAATTCGGCACGCAGGTTCATGTTGAAGTGGATGGCCCCGGTGTACCAAATCATTCCCAAGAATCGAATTCAACTAATAGGAATATACGGTTCAGTAATGGACTATTGAAATACTTTTGTCGGAATCGCAAATCTTCTGAAAATAATTCAAAACAAATCTCATCAATCCAAATTTCACGGAAATCCAAATCACCAAAAGACGAATTACATAAACAGTCTGATGTATGTATATCTGATGCATCTAATTGTCATGAGAAAACACTGACCTCAATCACTCCTATGTGGATGCGAAAACGAGGACTTCATGGTTCATATAGATATGTCAGTAACTCTAGAACTGATAAGCGCAGATGTAAACGAATTCATTCCTTATCCGTTAATCCACCGAGTAAGCCCTCTGATCAGTTAGAGGCTAGTGTAATTCCAGAAAGAGCTGATATCAAGTTAGAATGTGTGGATCACGGTGGTTTACTCGACGAGTCGGATAATAAGACATCGAAACTAATAACGAATATATAGAATAGTAGCTGCTAAGTTCCTTCCTTGAGATTC-TTTTTTTTCCCGAGAGAAACTATTTGAAGTGTCTTCCGGTCTCACTGATTCGAAAATTTAATATTGTAATAGGTAAAGACTTCTACTGAATTTTTAGGATTTTCCTTAACAAAAAGCTCAGTGATTGACTACCGCTACATCTTAAATGTACATAATTTTGCTTTTGATGTTAGATTTTGTTTCAATGTTTCCTATTTCATAATGAAACGGTATTATTTTCATAATTGTATATACATATTCAATAAAATGTGAACTTCTATGAATAATTATTATGNCG-TTAATACTATTAGATTATTTCAGTTAATTAAAGTTGTATCA]
[+] EMBL CD081783 [CGGAGCCATTAATTCGGCACGCAGGTTCATGTTGAAGTGGATGGCCCCGGTGTACCAAATCATTCCCAAGAATCGAATTCAACTAATAGGAATATACGGTTCAGTAATGGACTATTGAAATACTTTTGTCGGAATCGCAAATCTTCTGAAAATAATTCAAAACAAATCTCATCAATCCAAATTTCACGGAAATCCAAATCACCAAAAGACGAATTACATAAACAGTCTGATGTATGTATATCTGATGCATCTAATTGTCATGAGAAAACACTGACCTCAATCACTCCTATGTGGATGCGAAAACGAGGACTTCATGGTTCATATAGATATGTCAGTAACTCTAGAACTGATAAGCGCAGATGTAAACGAATTCATTCCTTATCCGTTAATCCACCGAGTAAGCCCTCTGATCAGTTAGAGGCTAGTGTAATTCCAGAAAGAGCTGATATCAAGTTAGAATGTGTGGATCACGGTGGTCTACTCGACGAGTCGGATAATAAGACATCGAAACTAATAACGAATATATAGAATAGTAGCTGCTAAGTTCCTTCCTTGAGATTC TTTTTTTTCCCGAGAGAAACTATTTGAAGTGTCTTCCGGTCTCACTGATTCGAAAATTTAATATTGTAATAGGTAAAGACTTCTACTGAATTTTTAGGATTTTCCTTAACAAAAAGCTCAGTGATTGACTACCGCTACATCTTANATGTACACAATTTTGCTTTTGATGTTAGATTTTGTTTCAATGTTTCCTATTTCATAATGAAACGGTATTATTTTCATAATTGTATATACATATTCAATAAAATGTGAACTTCTATGAATAATTATTATGNCG TTAATACTATTAGATTATTTCAGTTAATTAAAGTTGTATC ]
[-] EMBL CD075514 [ TTCAAAACAAATCTCATCAATCCAAATTTCACGGAAATCCAAATCACCAAAAGACGAATTACATAAACAGTCTGATGTATGTATATCTGATGCATCTAATTGTCATGAGAAAACACTGACCTCAATCACTCCTATGTGGATGCGAAAACGAGGACTTCATGGTTCATATAGATATGTCAGTAACTCTAGAACTGATAAGCGCAGATGTAAACGAATTCATTCCTTATCCGTTAATCCACCGAGTAAGCCCTCTGATCAGTTAGAGGCTAGTGTAATTCCAGAAAGAGCTGATATCAAGTTAGAATGTGTGGATCACGGTGGTTTACTCGACGAGTCGGATAATAAGACATCGAAACTAATAACGAATATATAGAATAGTAGCTGCTAAGTTCCTTCCTTGAGATTC TTTTTTTTCCCGAGAGAAACTATTTGAAGTGTCTTCCGGTCTCACTGATTCGAAAATTTAATATTGTAATAGGTAAAGACTTCTACTGAATTTTTAGGATTTTCCTTAACAAAAAGCTCAGTGATTGACTACCGCTACATCTTAAATGTACATAATTTTGCTTTTGATGTTAGATTTTGTTTCAATGTTTCCTATTTCATAATGAAACGGTATTATTTTCATAATTGTATATACATATTCAATAAAATGTGAACTTCTATGAATAATTATTATG CGTTTAATACTATTAGATTATTTCAGTTGATTAAAGTTGTATCA]
[-] EMBL CD075136 [ ATAAACAGTCTGATGTATGTATATCTGATGCATCTAATTGTCATGAGAAAACACTGACCTCAATCACTCCTATGTGGATGCGAAAACGAGGACTTCATGGTTCATATAGATATGTCAGTAACTCTAGAACTGATAAGCGCAGATGTAAACGAATTCATTCCTTATCCGTTAATCCACCGAGTAAGCCCTCTGATCAGTTAGAGGCTAGTGTAATTCCAGAAAGAGCTGATATCAAGTTAGAATGTGTGGATCACGGTGGTTTACTCGACGAGTCGGATAATAAGACATCGAAACTAATAACGAATATATAGAATAGTAGCTGCTAAGTTCCTTCCTTGAGATTCTTTTTTTTTCCCGAGAGAAACTATTTGAAGTGTCTTCCGGTCTCACTGATTCGAAAATTTAATATTGTAATAGGTAAAGACTTTTACTGAATTTTTAGGATTTTCCTTAACAAAAAGCTCAGTGATTGACTACCGCTACATCTTAAATGTACATAATTTTGCTTTTGATGTTAGATTTTGTTTCAATGTTTCCTATTTCATAATGAAACGGTATTATTTTCATAATTGTATATACATATTCAATAAAATGTGA ]
[-] EMBL CD073052 [ GTGGATGCGAAAACGAGGACTTCATGGTTCATATAGATATGTCAGTAACTCTAGAACTGATAAGCGCAGATGTAAACGAATTCATTCCTTATCCGTTAATCCACCGAGTAAGCCCTTTGATCAGTTAGAGGGTAGTGTAATTCCAGAAAGAGCTGATATCAAGTTAGAATGTGTGGATCACGGTGGTTTACTCGACGAGTCGGATAATAAGACATCGAAACTAATAACGAATATATAGAATAGTAGCTGGTAAGTTCCTTCCTTGAGATTCTTTTTTTTTCCCGAGAGAAACTATTTGAAGTGTTTTCCGGTTTCACTGATTTGAAAATTTAATATTGTAATAGGTAAAGACTTTTACTGAATTTTTAGGATTTTCCTTAACAAAAAGCTCAGTGATTGACTACCGCTACATTTTAAATGTACATAATTTTGCTTTTGATGTTAGATTTTGTTTCAATGTTTCCTATTTCATAATGAAACGGTATTATTTTCATAATTGTATATACATATTCAATAAAATGTGA ]
consensusID : consensus_10481#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 830 fasta sequence
[CCTCCGAGGCCAGAATTCGGCACGAGGCTTATCCGCTTAGAATACTTAGTTCATGTTGAAGTGGATGGCCCCGGTGTACCAAATCATTCCCAAGAATCGAATTCAACTAATAGGAATATACGGTTCAGTAATGGACTATTGAAATACTTTTGTCGGAATCGCAAATCTTCTGAAAATAATTCAAAACAAATCTCATCAATCCAAATTTCACGGAAATCCAAATCACCAAAAGACGAATTACATAAACAGTCTGATGTATGTATATCTGATGCATCTAATTGTCATGAGAAAACACTGACCTCAATCACTCCTATGTGGATGCGAAAACGAGGACTTCATGGTTCATATAGATATGTCAGTAACTCTAGAACTGATAAGCGCAGATGTAAACGAATTCATTCCTTATCCGTTAATCCACCGAGTAAGCCCTCTGATCAGTTAGAGGCTAGTGTAATTCCAGAAAGAGCTGATATCAAGTTAGAATGTGTGGATCACGGTGGTCTACTCGACGAGTCGGATAATAAGACATCGAAACTAATAACGAATATATAGAATAGTAGCTGCTAAGTTCCTTCCTTGAGATTCTTTTTTTTTCCCGAGAGAAACTATTTGAAGTGTCTTCCGGTCTCACTGATTCGAAAATTTAATATTGTAATAGGTAAAGACTTCTACTGAATTTTTAGGATTTTCCTTAACANAAAGCTCAGTGATTGACTACCGCTACATCTTAAATGTACATAANNTTTGCTTTTGATGTAGATTTTGTTNCAATGTTTCCCTATTCATATGAAACGGNATATTTTATAATGGATATCATATTCAATAAAGTG]
[+] EMBL CD081304 [CCTCCGAGGCCAGAATTCGGCACGAGGCTTATCCGCTTAGAATACTTAGTTCATGTTGAAGTGGATGGCCCCGGTGTACCAAATCATTCCCAAGAATCGAATTCAACTAATAGGAATATACGGTTCAGTAATGGACTATTGAAATACTTTTGTCGGAATCGCAAATCTTCTGAAAATAATTCAAAACAAATCTCATCAATCCAAATTTCACGGAAATCCAAATCACCAAAAGACGAATTACATAAACAGTCTGATGTATGTATATCTGATGCATCTAATTGTCATGAGAAAACACTGACCTCAATCACTCCTATGTGGATGCGAAAACGAGGACTTCATGGTTCATATAGATATGTCAGTAACTCTAGAACTGATAAGCGCAGATGTAAACGAATTCATTCCTTATCCGTTAATCCACCGAGTAAGCCCTCTGATCAGTTAGAGGCTAGTGTAATTCCAGAAAGAGCTGATATCAAGTTAGAATGTGTGGATCACGGTGGTCTACTCGACGAGTCGGATAATAAGACATCGAAACTAATAACGAATATATAGAATAGTAGCTGCTAAGTTCCTTCCTTGAGATTCTTTTTTTTTCCCGAGAGAAACTATTTGAAGTGTCTTCCGGTCTCACTGATTCGAAAATTTAATATTGTAATAGGTAAAGACTTCTACTGAATTTTTAGGATTTTCCTTAACANAAAGCTCAGTGATTGACTACCGCTACATCTTAAATGTACATAANNTTTGCTTTTGATGTAGATTTTGTTNCAATGTTTCCCTATTCATATGAAACGGNATATTTTATAATGGATATCATATTCAATAAAGTG]
[+] EMBL CD078587 [ CTTATCCGCTTAGAATACTTAGTTCATGTTGAAGTGGATGGCCCCGGTGTACCAAATCATTCCCAAGAATCGAATTCAACTAATAGGAATATACGGTTCAGTAATGGACTATTGAAATACTTTTGTCGGAATCGCAAATCTTCTGAAAATAATTCAAAACAAATCTCATCAATCCAAATTTCACGGAATTCCAAATCACCAAAAGACGAATTACATAAACAGTCTGATGTATGTATATCTGATGCATCTAATTGTCATGAGAAAACACTGACCTCAATCACTCCTATGTGGATGCGAAAACGAGGACTTCATGGTTCATATAGATATGTCAGTAACTCTAGAACTGATAAGCGCAGATGTAAACGAATTCATTCCTTATCCGTTAATCCACCGAGTAAGCCCTCTGATCAGTTAGAGGCTAGTGTAATTCCAGAAAGAGCTGATATCAAGTTAGAATGTGTGGATCACGGTGGTCTACTCGACGAGTCGGATAATAAGACATCGAAACTAATAACGAATATATAGAATAGTAGCTGCTAAGTTCCTTCCTTGAGATTCTTTTTTTTTCCCGAGAGAAACTATTTGAAGTGTCTTCCGGTCTCACTGATTCGAAAATTTAATATTGGTATAGGTAAAGACTTCTACTGAATT ]
consensusID : consensus_10481#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 639 fasta sequence
[GCTTTCCCAAGGCTGAAACGCAATTATTGTTGTGATGTCTTCTCTAACTATGTACGTGCTCCTCGGATCATTTCACCAACATTGATTATTCATGGCACTGAAGATGAAATAATCGATCGAGTTCATGCCCAGAGGTTGTACGAACGTATTCCTAATACTTTGGAACCACTATTTATTCGTGGAGCTGGTCATAATGATTGTGAACTGTATGAAGAATATCTTATCCGCTTAGAATACTTAGTTCATGTTGAAGTGGATGGCCCCGGTGTACCAAATCATTCCCAAGAATCGAATTCAACTAATAGGAATATACGGTTCAGTAATGGACTATTGAAATACTTTTGTCGGAATCGCANATCTTCTGANAATAATTCAAAACAAATCTCATCAATCCAAATTTCACGGAAATCCANATCACCAAAAGACGAATTACATAAACAGTCTGATGTATGTATATCTGATGCATCTAATTGTCATGAGAAAACACTGACCTCAATCACTCCTATGTGGATGCGAAAACGAGGACTTCATGGNTCATATAGATATGTCAGTAACTCTAGAACTGANTAGCGCAGATGTAAACGAATTCATTCTTNATNNCCGGTATCCACCGAAGTAGCCCTCTGATCAGTTAGAGGC]
[+] EMBL CD132902 [GCTTTCCCAAGGCTGAAACGCAATTATTGTTGTGATGTCTTCTCTAACTATGTACGTGCTCCTCGGATCATTTCACCAACATTGATTATTCATGGCACTGAAGATGAAATAATCGATCGAGTTCATGCCCAGAGGTTGTACGAACGTATTCCTAATACTTTGGAACCACTATTTATTCGTGGAGCTGGTCATAATGATTGTGAACTGTATGAAGAATATCTTATCCGCTTAGAATACTTAGTTCATGTTGAAGTGGATGGCCCCGGTGTACCAAATCATTCCCAAGAATCGAATTCAACTAATAGGAATATACGGTTCAGTAATGGACTATTGAAATACTTTTGTCGGAATCGCANATCTTCTGANAATAATTCAAAACAAATCTCATCAATCCAAATTTCACGGAAATCCANATCACCAAAAGACGAATTACATAAACAGTCTGATGTATGTATATCTGATGCATCTAATTGTCATGAGAAAACACTGACCTCAATCACTCCTATGTGGATGCGAAAACGAGGACTTCATGGNTCATATAGATATGTCAGTAACTCTAGAACTGANTAGCGCAGATGTAAACGAATTCATTCTTNATNNCCGGTATCCACCGAAGTAGCCCTCTGATCAGTTAGAGGC]
[+] EMBL CD119265 [ GAAATAATCGATCGAGTTCATGCCCAGAGGTTGTACGAACGTATTCCTAATACTTTGGAACCACTATTTATTCGTGGAGCTGGTCATAATGATTGTGAACTGTATGAAGAATATCTTATCCGCTTAGAATACTTAGTTCATGTTGAAGTGGATGGCCCCGGTGTACCAAATCATTCCCAAGAATCGAATTCAACTAATAGGAATATACGGTTCAGTAATGGACTATTGAAATACTTTTGTCGGAATCGCAAATCTTCTGAAAATAATTCAAAACAAATCTCATCAATCCAAATTTCACGGAAATCCAAATCACCAAAAGACGAATTACATAAACAGTCTGATGTATGTATATCTGATGCATCTAATTGTCATGAGAAAACACTGACCTCAATCACTCCTATGTGGATGCGAAAACGAGGACTTCATGGTTCATATAGATATGTCAGTAACTCTAGAACTGATAAGCGC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10481#2 ------------------------------------------------------------
consensus_10481#3 ------------------------------------------------------------
consensus_10481#4 -----GCTTTCCCAAGGCTGAAACGCAATTATTGTTGTGATGTCTTCTCTAACTATGTAC 55
consensus_10481#0 AATGACAGATAGATACGTTGAAATATAATGATCGATCTTATGTAAGTGTCAAAGAGTTCA 60
consensus_10481#1 ------------------------------------------------------------
consensus_10481#2 ------------------------------------------------------------
consensus_10481#3 ------------------------------------------------------------
consensus_10481#4 GTGCTCCTCGGATCATTTCACCAACATTGATTATTCATGGCACTGAAGATGAAATAATCG 115
consensus_10481#0 AAAAT--TCAGAATTTATCATGGGTCAACATTCATGTGAATCTTTTACAGAACATTGTTA 118
consensus_10481#1 ------------------------------------------------------------
consensus_10481#2 ------------------------------------------------------------
consensus_10481#3 ------------------------------------------------------------
consensus_10481#4 ATCGAGTTCATGCCCAGAGGTTGTACGAACGTATTCCTAATACTTTGGAACCACTATTTA 175
consensus_10481#0 AGTTAGCACTGGATCAGAACTATCAGAGTTTGATGTGGATTCGAATTTATTCACCATATT 178
consensus_10481#1 ---------------------------------------TTCGAATTTATTCACCATATT 21
consensus_10481#2 ---------------------------------------CGGAG-----CC-ATTAATTC 15
consensus_10481#3 ------------CCTCCGAGGCCAGAATTCGGCA-----CGAGG-----CTTATCCGCTT 38
consensus_10481#4 TTCGTGGAGCTGGTCATAATGATTGTGAACTGTA-----TGAAGAATATCTTATCCGCTT 230
consensus_10481#0 TTCCAGAGGTTTGTTGTTAAGAGTTTGTGTTATTTTTT-CAGAGGAAAATTCACGTGGT- 236
consensus_10481#1 TTCCAGAGGTTTGTTGTTAAGAGTTTGTGTTATTTTTTTCAGAGGAAAATTCACGTGGT- 80
* * *
consensus_10481#2 GGCACGCA-GGTTCATGT-TGAA---GTGGATGGCCCCGGTGTACCAAATCATTCCCAAG 70
consensus_10481#3 AGAATACTTAGTTCATGT-TGAA---GTGGATGGCCCCGGTGTACCAAATCATTCCCAAG 94
consensus_10481#4 AGAATACTTAGTTCATGT-TGAA---GTGGATGGCCCCGGTGTACCAAATCATTCCCAAG 286
consensus_10481#0 AAAGTCCATACTTTTTTT-GGTATTTGTAAATGACCTTGGTCAATTTCAGTTCCCAAAAG 295
consensus_10481#1 AAAGTCCATACTTTTTTTTGGTATTTGTAAATGACCTTGGTCAATTTCAGTTCCCAAAAG 140
* ** * * * * ** *** ** *** * * * ***
consensus_10481#2 AATCGAATTCAACTAATAGGAATATACGGTTCAGTAATGGACTATTGAAATACTTTTGTC 130
consensus_10481#3 AATCGAATTCAACTAATAGGAATATACGGTTCAGTAATGGACTATTGAAATACTTTTGTC 154
consensus_10481#4 AATCGAATTCAACTAATAGGAATATACGGTTCAGTAATGGACTATTGAAATACTTTTGTC 346
consensus_10481#0 CTTCGATGTCAACTTCC-GAGGCAAAGTATTTATCTTTCCATTTTTTTAGAGAAGACATC 354
consensus_10481#1 CTTCGATGTCAACTTCC-GAGGCAAAGTATTTATCTTTCCATTTTTCTGAGTATGTAAAG 199
**** ****** * * * ** * * * * **
consensus_10481#2 GGAATCGCAAAT---CTTCTGAAAATAATTCAAAACAAATCTCATCAATCCA-----AAT 182
consensus_10481#3 GGAATCGCAAAT---CTTCTGAAAATAATTCAAAACAAATCTCATCAATCCA-----AAT 206
consensus_10481#4 GGAATCGCANAT---CTTCTGANAATAATTCAAAACAAATCTCATCAATCCA-----AAT 398
consensus_10481#0 ACAACAATAATT---GCGTTTCAGC---CTTGGGAAAGCTACCCTTAACCCG-----GAC 403
consensus_10481#1 ACCACAATAATTCAGACGATTGGAAAAAATCCGAATCACCGTTTGTAGGTGGCGGAGGAG 259
* * * * * * * *
consensus_10481#2 TTCACGGAAATCCAAATC-ACCA----AAAGACGAATTACATAAACAGTCTGATGTATGT 237
consensus_10481#3 TTCACGGAAATCCAAATC-ACCA----AAAGACGAATTACATAAACAGTCTGATGTATGT 261
consensus_10481#4 TTCACGGAAATCCANATC-ACCA----AAAGACGAATTACATAAACAGTCTGATGTATGT 453
consensus_10481#0 ATCAATGGAGAGTGTAGT-ACAA----CAGCTGCAACTCGATGAAGAGTA-GCCAGATGT 457
consensus_10481#1 GTGGAGGAAGAGTAAGGTTACAAATGTCAGATGGAAGTGAATGCAAATCA--TCAAGTGA 317
* * * ** * * ** * ** * * **
consensus_10481#2 ATATCTGATGCA-TCTAATTGTCATGAGAAAACACTGACCTCAATCA---CTCCTATGTG 293
consensus_10481#3 ATATCTGATGCA-TCTAATTGTCATGAGAAAACACTGACCTCAATCA---CTCCTATGTG 317
consensus_10481#4 ATATCTGATGCA-TCTAATTGTCATGAGAAAACACTGACCTCAATCA---CTCCTATGTG 509
consensus_10481#0 ATTGTCGGTACAGTCCCAATGCTCTGGCCGTACAAAA----CAATTT---GGTTTAAAGG 510
consensus_10481#1 AATGCTAG-ACAGACAATCAGTTGTAACTACTGAAAACTGGGAAACAACAGCTTCATTCT 376
* ** * * * * ** *
consensus_10481#2 GATGCGAAAACGAGGACTTCATGGTTCATATAGATATGTCAGTAACTCTAGAA--CTGAT 351
consensus_10481#3 GATGCGAAAACGAGGACTTCATGGTTCATATAGATATGTCAGTAACTCTAGAA--CTGAT 375
consensus_10481#4 GATGCGAAAACGAGGACTTCATGGNTCATATAGATATGTCAGTAACTCTAGAA--CTGAN 567
consensus_10481#0 GACAGAATACTTCGTCCTTAAAACATTTAGTGCACAC-TCAGCATCAGCATAA--AGGTT 567
consensus_10481#1 GATCCATGCACTTTTCCACAGCAATCTGGCTTCCTACTTGTACATCAGAATCGTTATGGT 436
** * * * * * * * *
consensus_10481#2 AAGCGCAGATG-TAAACGAATTCATTCCTT-ATCCGTTA-ATCCACCGAGTAA----GCC 404
consensus_10481#3 AAGCGCAGATG-TAAACGAATTCATTCCTT-ATCCGTTA-ATCCACCGAGTAA----GCC 428
consensus_10481#4 TAGCGCAGATG-TAAACGAATTCATTCTTN-ATNNCCGGTATCCACCGAAGTA----GCC 621
consensus_10481#0 TTTTTCCAATGGCTTTCCAGAAGATGCTCC-ATAGCCTGAATAATCGTAACAC----ATG 622
consensus_10481#1 GTCTACTAACACCAATCAGACAGGTACTAGGATCATCAACGGACTTAAAGCACTTTTGTG 496
* * * * * ** *
consensus_10481#2 CTCTGATCAGTTAGAGGC--TAGTGTAATTCC--AGAAAGAGCTGA--TATCAA-----G 453
consensus_10481#3 CTCTGATCAGTTAGAGGC--TAGTGTAATTCC--AGAAAGAGCTGA--TATCAA-----G 477
consensus_10481#4 CTCTGATCAGTTAGAGGC------------------------------------------ 639
consensus_10481#0 ATGTTAACGTTTAACTTG--CTACCCAGTTCA--TACATGAAGTGAAGCATCAG-----A 673
consensus_10481#1 ATGATAACGATGGAGTTGGGCTGGTTCGTTGAGGAGAATGAATGATTTCATCAGGAGGTA 556
* * * *
consensus_10481#2 TTAGAATGTG--TGG-ATCACGGT--GGTTTACTCGACGAGTCGGATAATAAGAC--ATC 506
consensus_10481#3 TTAGAATGTG--TGG-ATCACGGT--GGTCTACTCGACGAGTCGGATAATAAGAC--ATC 530
consensus_10481#4 ------------------------------------------------------------
consensus_10481#0 CCCAAGTCCA--CGGCATTTCCAT--GGCTTAACAAGAATGTTAGCTTAGATGACGAATT 729
consensus_10481#1 TCTGTTCGCAAACGTTACTTACACTGAGCCTGCTAGACATTGAGTCCGAAGTAAGGTTCC 616
consensus_10481#2 GAAA--CTAATAACGAA-------TATATAGAATAGTAGCTGCTA-AGTTCCTTCCTT-- 554
consensus_10481#3 GAAA--CTAATAACGAA-------TATATAGAATAGTAGCTGCTA-AGTTCCTTCCTT-- 578
consensus_10481#4 ------------------------------------------------------------
consensus_10481#0 GATAGGCATATAAAGAA-------TCGCGATATTATTCCCCCTTCTAGTTGTAGCCTT-- 780
consensus_10481#1 AAGAAGGACGTGAGAAAAAAAGCTTTGTTGATTTATCTTCCTCTCCCCCTACTGTATTGC 676
consensus_10481#2 GAGATTCTTTTTTTT-CCCGAGAGAAACTATTTGAAGTGTCTT----CCGGTCTCACTGA 609
consensus_10481#3 GAGATTCTTTTTTTTTCCCGAGAGAAACTATTTGAAGTGTCTT----CCGGTCTCACTGA 634
consensus_10481#4 ------------------------------------------------------------
consensus_10481#0 CATTGACTCCATGTTTTCCGGGACAAAATGGATAAATGAATCT----TTCAAGT--ATGA 834
consensus_10481#1 CATTCATGCTAAAATACCCATGAGAATTTAGTGAAACCGGTACAGAGTTCGAACTAGATA 736
consensus_10481#2 TTCGAAAATTTAATATTGTAATAGGTAAAGACTTCTACTGAATTTTTAGGATTTTCCTTA 669
consensus_10481#3 TTCGAAAATTTAATATTGTAATAGGTAAAGACTTCTACTGAATTTTTAGGATTTTCCTTA 694
consensus_10481#4 ------------------------------------------------------------
consensus_10481#0 AGCCAGAG--TAAAGCGGTATGTAGTATGTCCTCCTTCAGTATGTTCTGTCAGTTTATAA 892
consensus_10481#1 AATCTGACTGACTATCCTCTTTAACTGTCGCTTTATCCAGTAGTCTAGACGACTCTACTT 796
consensus_10481#2 ACAAAAAGCTCAGT-GATTGACTACCGCTACATCTT-AAATGTACATAATTTT-GCTTTT 726
consensus_10481#3 ACANAAAGCTCAGT-GATTGACTACCGCTACATCTT-AAATGTACATAANNTTTGCTTTT 752
consensus_10481#4 ------------------------------------------------------------
consensus_10481#0 CTGGAAGGCGGAGG-CATAAATGCCAACTTAGCTGC-AATTTTGGATGGTAATGGAGGAC 950
consensus_10481#1 CCGTATCTCCTACTTCAGAAACATTTTGTGAACAATTAGAATTCAACAGTAATCGAGG-T 855
consensus_10481#2 GATGTTAGATTTTGTTT-CAATGTTTCCTATTTCATAATGAAACGGTATTATTTTCAT-A 784
consensus_10481#3 GATGT-AGATTTTGTTN-CAATGTTTCCCTATTCATA-TGAAACGGNATA--TTTTAT-A 806
consensus_10481#4 ------------------------------------------------------------
consensus_10481#0 AACACAATAGTTGACAAATACTGTTGCAGCTTAAATCATTCATCAGTCTG-CAATAAT-G 1008
consensus_10481#1 AATTCCACAGTAACCAACTTAGTTAGGCGCAAAAGACACTGAGGGAAAAGTTCGCAGTCA 915
consensus_10481#2 ATTGTATATACATATTCAATAAAATGTGAACTTCTATGAATAATTATTATGNCGTTAATA 844
consensus_10481#3 AT-GGATAT-CATATTCAATAAAGTG---------------------------------- 830
consensus_10481#4 ------------------------------------------------------------
consensus_10481#0 TTGCAAACAAAGCTTTCACTGGGAAACGAAGATGTGCCAAAAGAGCCTTGCGTTCAGTGG 1068
consensus_10481#1 TTGTGTCCGGCTCCATCAATGAAAA--GAGGATCCAACAATAGA---TTACCTGCTACAG 970
consensus_10481#2 CTATTAGATTATTTCAGTTAATTAAAGTTGTATCA------------------------- 879
consensus_10481#3 ------------------------------------------------------------
consensus_10481#4 ------------------------------------------------------------
consensus_10481#0 TTTTTTCAACATCATTGTCATGAGGAGGAGTTCATAGTTAAATAGAATGATAT------- 1121
consensus_10481#1 CAGAACATATACGGTAACCGTGAGTAAC-GTTCACAACCTCATCACGTGTCCCATGAATC 1029
consensus_10481#2 -------------------------
consensus_10481#3 -------------------------
consensus_10481#4 -------------------------
consensus_10481#0 -------------------------
consensus_10481#1 ACTAATGTAGGTGAGATAATTTTCG 1054
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||